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/nucleotide-transformer-v2-50m-multi-species
/euk_18S_phylogeny.json
{ | |
"task": { | |
"id": "euk_18S_phylogeny", | |
"display_name": "18S Eukaryotic Phylogeny", | |
"description": "Evaluate on 18S Eukaryotic phylogeny distance correlation task.", | |
"modality": "dna", | |
"type": "eds", | |
"datasets": [ | |
{ | |
"path": "tattabio/euk_18S_sequences", | |
"revision": "5174cb3b2c5c46b61307fd1c2c08f5c432655196" | |
}, | |
{ | |
"path": "tattabio/euk_18S_distances", | |
"revision": "c4cea4fbb1185d08e0e01fd28ffb8b06a25025da" | |
} | |
], | |
"primary_metric_id": "top_corr" | |
}, | |
"model": { | |
"hf_name": "InstaDeepAI/nucleotide-transformer-v2-50m-multi-species", | |
"revision": "...", | |
"num_layers": 12, | |
"num_params": 55904972, | |
"embed_dim": 512 | |
}, | |
"dgeb_version": "0.0.0", | |
"results": [ | |
{ | |
"layer_number": 6, | |
"layer_display_name": "6", | |
"metrics": [ | |
{ | |
"id": "cos_sim", | |
"display_name": "cos_sim", | |
"description": null, | |
"value": 0.2795506243365705 | |
}, | |
{ | |
"id": "manhattan", | |
"display_name": "manhattan", | |
"description": null, | |
"value": 0.3377836786404048 | |
}, | |
{ | |
"id": "euclidean", | |
"display_name": "euclidean", | |
"description": null, | |
"value": 0.33795640524026876 | |
}, | |
{ | |
"id": "top_corr", | |
"display_name": "top_corr", | |
"description": null, | |
"value": 0.33795640524026876 | |
} | |
] | |
}, | |
{ | |
"layer_number": 11, | |
"layer_display_name": "11", | |
"metrics": [ | |
{ | |
"id": "cos_sim", | |
"display_name": "cos_sim", | |
"description": null, | |
"value": 0.30224942362141677 | |
}, | |
{ | |
"id": "manhattan", | |
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"description": null, | |
"value": 0.31698287710587075 | |
}, | |
{ | |
"id": "euclidean", | |
"display_name": "euclidean", | |
"description": null, | |
"value": 0.31744544631481525 | |
}, | |
{ | |
"id": "top_corr", | |
"display_name": "top_corr", | |
"description": null, | |
"value": 0.31744544631481525 | |
} | |
] | |
} | |
] | |
} | |