first commit

baseeditorsV6.py

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+#from turtle import shape
+import streamlit as st
+#from st_keyup import st_keyup
+import pandas as pd
+import numpy as np
+from st_aggrid import AgGrid, GridOptionsBuilder,GridUpdateMode,DataReturnMode
+
+
+import time
+import os
+from PIL import Image
+
+
+#if 'select_method' not in st.session_state:
+#    st.session_state['select_method'] = 'temp'
+#if 'method' not in st.session_state:
+#    st.session_state['method'] = 'temp'
+
+def transform(df,str):
+    # Select columns
+    #cols = st.multiselect('Please select columns to save current Table as csv file', 
+    cols = st.multiselect(str, 
+    df.columns.tolist(),
+    df.columns.tolist()
+    )
+    df = df[cols]
+    return df
+@st.cache
+def convert_df1(df):
+    return df.to_csv(index=False).encode('utf-8')
+
+def convert_df(df):
+    return df.to_csv().encode('utf-8')
+
+def display_res(method,sep,rsid):
+#if method == 'bystander_ABE8e_mean':
+    st.header(select_method+' with: '+method+' option')
+    fnm=cwd+select_method+'/'+select_method+'_'+method+'.csv'
+    #data = pd.read_csv(fnm, sep=',')
+    data = pd.read_csv(fnm, sep=sep)
+    
+    #get snp data
+    if len(variant_spl) > 1: #variant_spl has two components
+        #data_snp = data[data['rs_id'].str.contains(variant_spl[1])]
+        data_snp = data[data[rsid].str.contains(variant_spl[1])]
+        data_snp[rsid]=variant_spl[0]+':'+data_snp[rsid]
+    else:
+        #data_snp = data[data['rs_id'].str.contains(variant_spl[0])]
+        data_snp = data[data[rsid].str.contains(variant_spl[0])]
+        data_snp[rsid]='NaN'+':'+data_snp[rsid]
+    data_snp.reset_index(drop=True, inplace=True)
+    
+    if data_snp.shape[0]>0:
+        df = transform(data_snp,'Please Select columns to save whole table')
+        #fname = st_keyup("Please input file name to save Table", value='temp') #st.text_input('Please input file name to save Table', 'temp', live=True)
+        
+        csv = convert_df(df)
+
+        st.download_button(
+            label="Download Table as CSV file",
+            data=csv,
+            #file_name=fname+'.csv',
+            file_name=method+'_'+variant_spl[0]+'.csv',
+            mime='text/csv',
+        )
+
+    if len(variant_spl) > 1:
+        f"""
+            **Results for SNP: {variant_spl[1]} on GENE: {variant_spl[0]}**
+        """
+    else:
+        f"""
+            **Results for SNP: {variant_spl[0]} on GENE: NAN**
+        """
+    #AgGrid(data_snp)
+    st.markdown(table_edit,unsafe_allow_html=True)
+    gb = GridOptionsBuilder.from_dataframe(data_snp)
+    gb.configure_pagination(enabled=False)#,paginationAutoPageSize=False)#True) #Add pagination
+    gb.configure_default_column(enablePivot=True, enableValue=True, enableRowGroup=True)
+    gb.configure_selection(selection_mode="multiple", use_checkbox=True)
+
+    gb.configure_side_bar()
+    gridOptions = gb.build()    
+
+    grid_response = AgGrid(
+        data_snp,
+            height=200,
+            gridOptions=gridOptions,
+            enable_enterprise_modules=True,
+            update_mode=GridUpdateMode.MODEL_CHANGED,
+            data_return_mode=DataReturnMode.FILTERED_AND_SORTED,
+            fit_columns_on_grid_load=False,
+            header_checkbox_selection_filtered_only=True,
+            use_checkbox=True,
+            width='100%'
+    )
+
+    #data = grid_response['data']
+    selected = grid_response['selected_rows']   
+    if selected:
+        st.write('Selected rows')
+        
+        dfs = pd.DataFrame(selected)
+        st.dataframe(dfs[dfs.columns[1:dfs.shape[1]]])
+
+        dfs1 = transform(dfs[dfs.columns[1:dfs.shape[1]]],'Please select columns to save selected Table')
+        #csv = convert_df1(dfs[dfs.columns[1:dfs.shape[1]]])
+        csv = convert_df1(dfs1)
+        
+
+        st.download_button(
+            label="Download data as CSV",
+            data=csv,
+            file_name=method+'_'+variant_spl[0]+'.csv',
+            mime='text/csv',
+        )
+
+
+
+st. set_page_config(layout="wide") 
+
+cwd=os.getcwd()+'/'+'data/'
+
+#get snps list
+snps = pd.read_csv("SNPS.csv")
+variants=snps['GENE:SNP'].unique()
+variants_s=sorted(variants,key=len)
+
+caution = '<p style="font-family:sans-serif; color:Red; font-size: 18px;">Please note that not (necessarily) all variants are targetted.</p>'
+
+tips = '<p style="font-family:sans-serif; color:Green; font-size: 18px;">Important Tool Tips:</p>'
+
+table_edit = '<p style="font-family:sans-serif; color:Green; font-size: 16px;">About Table: Please note that table can be <b>sorted based on by clicking on any column</b> and <b>Multiple rows can be selected</b> (by clicking check box in first column) to save only those rows.</p>'
+
+
+
+st.title('Single Base Editiors')
+
+st.sidebar.image("logo-card-white.png", use_column_width=True)
+#ReadMe = st.sidebar.radio('ReadME',value=True)
+
+#Calc = st.sidebar.radio('Selection Menu')
+Calc = st.sidebar.radio(
+    "",
+    ('ReadME', 'Selection Menu'))
+
+#if Calc:
+
+#st.sidebar.title("Selection Menu")
+if Calc == 'ReadME':
+    #st.markdown("[Introduction](#Introduction)")    
+    #st.markdown("[How do base editors work](#How-do-base-editors-work)")   
+    st.header('How to use this app')
+    st.markdown('Please note that all tools were run using Human Genome **(hg38)**. Each tool require **specific input format** (described for each tool selected from the sidebar when **Selection Menue is enabled**) and **output results** in different formats **(with different columns based on method selected as described under each tool)**. Some of these tools also allow selection of various **endonucleases and related options**, their **reulsts are provided as radio controls** in the sidebar of this app under each tool.')
+    st.markdown('**Requirements:** 1) Python3.4 or higher and 2) streamlit 1.13')
+    st.markdown('To start this app, **unzip** the base_editor_app.zip in a folder of your choice')
+    st.markdown('Open shell terminal and **cd to base_editor_app folder**')
+    st.markdown('Type: **streamlit run baserditorsV3.py**, It will launch baseeditor app in the default browser')
+    st.markdown('**By default** README radio button is enabled to describe general information about the App and How to use it.')
+    st.markdown("- Please enable **Selection Menu** radio control in the sidebar **to enable variant, tool and endonuclease options**")
+    st.markdown("- Select Desired Variant from the dropdown list")
+    st.markdown("- Select a Tool from the dropdown list")
+    st.markdown("- Select one of the options **(if available)**")
+
+     
+    st.header('Introduction:')
+    st.markdown('This app **reviewes** popular single base quality estimators for a **list [1](https://drive.google.com/file/d/1Sxb-Cc-epbs6vujQaX9wa5acqus0RW3q/view?usp=sharing) of rsIDs** per disease of interest based on CARD’s cross-NDD efforts. We filtered our candidate list of **base edit predictors** for those that are at least **semi-automated and reproducible** (no copy and pasting IDs or sequences one at a time.')
+    st.markdown('Two categories of DNA base editors **(BEs)** are, a) cytosine base editors **(CBEs: C/G -> T/A converters)** and b) adenine base editors **(ABEs: A/T -> G/C converters)**, as shown in Figure below. While base editors can only introduce 4 edits, **Prime Editors** on the other hand can do all 12 edits using usual Cas9 (and its variants) and a gRNA called prime editing guide RNA (**pegRNA**). We also tested a **prime editor** and an **RNA editor for gene knockdown** for these targets')
+    image = Image.open('CBE_ABE.webp')
+    st.image(image, caption='Cytosine and Adenine base editors. Figure from: https://www.nature.com/articles/s41573-020-0084-6')
+    st.header('How do base editors work')
+    st.markdown("**Base editing requires three elements:**")
+    st.markdown("- A Cas nickase (Cas9 with mutation in RuvC nuclease domain, which enables it to nick but not cleave DNA) or Cas fused to a deaminase that makes the edit.")
+    st.markdown("- A single guide RNA (sgRNA which is composed of target-specific CRISPR RNA (crRNA) and an auxiliary trans-activating crRNA (trcrRNA) joined by linker loop) targeting Cas9 to a specific DNA locus")
+    st.markdown("- A target base for editing within the editing window specified by the Cas9 protein")
+    st.markdown('The Cas9 protein has six domains, REC I (responsible for binding guide RNA), REC II, Bridge Helix, PAM Interacting (**confers PAM specificity and is responsible for initiating binding to target DNA**), HNH and RuvC (**each cut single-stranded DNA after 3rd base upstream of PAM**). Cas9 and its variants are highly specific to various PAM sequences and have two endonuclease domains: the n-terminal RuvC-like nuclease domain and the HNH-like nuclease domain near the center of the protein')
+    st.markdown('A whole range of CBEs and ABEs have been developed. Various CEBs ranging from **simple** deactivated Cas9 (dCas9)+cytidine deaminsae+uracil DNA glycosylase inhibitor (UGI) to improved single mutated Cas9 (nCas9)+cytidine deaminsae+uracil DNA glycosylase inhibitor (UGI) called BE3 systems and its variants such as Target-AID editors were developed. 4th generation BEs (called BE4, such as BE4max etc which focus on improving editors delivery to the nucleus) further minimize undesired base conversions that can happen with BE33.') 
+    st.markdown('Similar to CBEs, **Adenine base editors (ABEs)** such as ABEmax, ABE4max, ABE8e and ABE8s were also developed.')
+    #st.markdown('Similar to CBEs, adenine base editor such as ABEmax, ABE4max, ABE8e and ABE8s were also developed.')
+    #st.markdown("**Key parameters for a good BE are:**")
+    #st.markdown("- Editing efficiency: 4th generation base editiors **BE4max and ABE4max [2](https://www.nature.com/articles/nbt.4172), ABE8s [3](https://www.nature.com/articles/s41587-020-0491-6) and Target-AID (dual base) [4](https://www.nature.com/articles/s41587-020-0535-y)**")
+    #st.markdown("- Editing efficiency")
+    #st.markdown("- Minimal off-target effects")
+    st.header('Base editor tools reviewed')
+    st.markdown('We have reviewed a total of 6 tools in the public domain which are **at least semi-automated and reproducible** (no copy and pasting IDs or sequences one at a time). These tools offer a wide range of options ranging from **HDR** based edits to improved **single base editors** to precise base editing such as **Prime editing**. Furthermore, many of these tools offer variety of PAM sequences expanding the number of available target sites for base editing')
+    """
+    - [BE-DICT](http://130.60.24.130/page-set?actionID=5f8c494b8c854d0029ffa9d3)
+        - An attention based deep learning algorithm for based editing outcomes prediction [Paper](https://www.nature.com/articles/s41467-021-25375-z).
+        - Options: ABE8e, ABEmax, BE4max, Target-AID.
+    - [ChopChop](https://chopchop.cbu.uib.no)
+        - This tool offers various Endonucleaes (Cas9, nCas9, Cpf1 (also known as Cas12a and **only contains crRNA**), CasX (generates staggered double-stranded break) and **Cas13 (also known as C2c2)) RNA editor**) and PAM options. Results for following options are reported in this app:
+        - Cas13a, CasX_TTCN, Cpf1_TTN, NGG (Cas9), Nickase_NGG, Nickase_NRG.
+    - [E-CRISP](http://www.e-crisp.org/E-CRISP/)
+        - This tool offers relaxed, medium and strict options for PAM sequence. 
+    - [GuideScan2](https://guidescan.com)
+        - This tool offers Cas9 and Cpf1 endonucleases with various options to filter out results. Results based on 30, 40 and 50bp (SNP location = (n/2)bp) input sequence range (for Cas9 and Cpf1) are reported in this app:
+        - 30bp_cpf1, 30bp_NGG, 40bp_cpf1, 40bp_NGG, 50bp_cpf1, 50bp_NGG
+    - [PnB Designer](https://fgcz-shiny.uzh.ch/PnBDesigner/)
+        - This tool allows base editing as well as **prime editing**. Results reported in this app are based on:
+        - Base_editing_guides, Nicking_guides, pegRNA_oligos
+    - [SNP_CRISPR](https://www.flyrnai.org/tools/snp_crispr/web/)
+        - This tool offers guides for  NGG and NAG PAM sequences and are reporoted in this app:
+        - NGG, NAG
+    """
+
+
+else:
+#if Calc == 'Selection Menu':
+    #ReadMe = st.sidebar.checkbox('ReadME',value=False)
+    select_variant = st.sidebar.selectbox(
+        "Please select variant",
+        variants_s
+    )
+
+    variant_spl=select_variant.split()
+    select_method = st.sidebar.selectbox(
+        "Please select a Tool",
+        ("BE-DICT", "ChopChop","E-CRISP","GuideScan2","PnB Designer","SNP_CRISPR")
+    )
+
+    if select_method == "ChopChop":
+        method = st.sidebar.radio(
+            "Please select an option",
+            ('Cas13a', 'CasX_TTCN','Cpf1_TTN','CRISPR-CAS9_NGG', 'Nickase_NGG','Nickase_NRG'))
+
+    if select_method == "BE-DICT":
+        method = st.sidebar.radio(
+            "Please select an option",
+            ('bystander_ABE8e_mean', 'bystander_ABEmax_mean_5','bystander_BE4max_mean','bystander_Target-AID_mean'))
+    if select_method == "GuideScan2":
+        method = st.sidebar.radio(
+            "Please select an option",
+            ('30bp_cpf1', '30bp_NGG','40bp_cpf1', '40bp_NGG','50bp_cpf1', '50bp_NGG'))
+
+    if select_method == "PnB Designer":
+        method = st.sidebar.radio(
+            "Please select an option",
+            ('Base_editing_guides', 'Nicking_guides_PE3_PE3b','pegRNA_oligos'))
+
+    if select_method == "SNP_CRISPR":
+        method = st.sidebar.radio(
+            "Please select an option",
+            ('NAG', 'NGG'))
+
+    #BE-DICT
+    if select_method == "BE-DICT":
+        st.markdown("**Summary**")
+        st.markdown("BE-DICT predicts base editiong outcomes for **4 commonly used base editors (BEs)**. It uses an attention-based deep learning algorithm (based on transformer-encoder architecture) trained on high-throughput target library (of 28,394 target sequences) screens to predict single base editing (Both **Adenine** {A.T -> G.C} and **Cytosine** {C.G -> T.A} **Base Editors**) outcomes.")
+        """
+        - Adenine Base Editors (ABEs)
+            - Based on Adenine deaminase ecTad7.10 **(ABEmax)** and ecTadA-8e **(ABE8e)**
+        - Cytosine Base Editors (CBEs)
+            - Based on Cytosine deaminase rAPOPEC1 **(CBE4max)** and **Target-AID**
+        """
+        st.markdown("Most base editors convert target bases in a ~5- nucleotide region within the protospacer target sequence and undesired **bystander** editing of additional C or A bases in the editing window are common.")
+        st.markdown("**All results shown here are based on bystander models for each ABE and CBE.**")
+        st.write("[BE-DICT Web App](http://130.60.24.130/page-set?actionID=5f8c494b8c854d0029ffa9d3)")
+        st.write("[BE-DICT Paper](https://www.nature.com/articles/s41467-021-25375-z)")
+        st.markdown(caution,unsafe_allow_html=True)
+        st.markdown("- Input: 2-column csv: col1=Inp_seq, col2=seq_id, where **Inp_seq is a 20 bp** target sequence and seq_id is an identification.")
+        st.markdown("- Output: 4 column csv file")
+        st.markdown("- **Columns of interest**: Output_seq and Pred_score columns **(Higher is better)**.")
+        st.markdown("**Batch mode** can be run from [here](http://130.60.24.130/page?actionID=607552549609a200293b663f)")
+        st.markdown("**Please note that: Only one of all possible alleles is used to generate this output.**")
+        st.markdown(tips,unsafe_allow_html=True)
+        st.markdown('This tool uses an **attention based deep learning framework** for base predictions and employ four different algorithms/models for prediction: ABEMax, BE4max, ABE8e, Target-AID.')
+        st.markdown('**Please note that this tool only targets NGG PAM**')
+        
+        display_res(method,',','rs_id')
+
+
+    
+
+    #ChopChop
+    if select_method == "ChopChop":
+        st.markdown("**Summary**")
+        st.markdown("ChopChop is a versatile tool that identifies CRISPR–Cas single guide RNA (sgRNA) targets for DNA and RNA including targeted enrichment of loci for long-read sequencing for over **200** genomes and **3** transcriptomes. It offers a wide range of selection of **CRISPR effectors** (Cas9, CasX or Cas13), **Species**, and **Purpose** (knockout, knockdown, activation, repression, enrichment) alongside a variety of **Options** including selection of specific region, PAM sequences, various efficiency measures, primers and many more.")
+        st.markdown("**Please note that not all options results in an efficienc score (0 is reported in efficiency column).**")
+        st.write("[ChopChop Web App](https://chopchop.cbu.uib.no)")
+        st.write("[ChopChop Paper](https://academic.oup.com/nar/article/47/W1/W171/5491735)")
+        st.markdown(caution,unsafe_allow_html=True)
+        st.markdown("- Input: A text file containing chr:start-end per line for each snp. Ex: chr1:152220450-152220451")
+        st.markdown("- Output: A tab separated text file")
+        st.markdown("- **Columns of interest**: Target sequence and Efficiency (**higher the better**). Please note that not all options have Efficiency defined.[Ref](https://chopchop.cbu.uib.no/instructions)")
+        st.markdown("**Instructions to run Batch mode** can be found [here](https://bitbucket.org/valenlab/chopchop/src/master/)")
+
+        st.markdown(tips,unsafe_allow_html=True)
+        """
+        - This tool offers sgRNA design for:
+            - **DNA using:** 
+                - CRISPR/Cas9 system for knockout, knockin, activation, repression and nanopore enrichment.
+                - CRISPR/Cpf1 or CasX system for knockout, activation, repression and nanopore enrichment.
+                - CRISPR/Cas9 nickase system for knockout and knockin.
+                - TALEN system for knockout.
+            - **RNA using:**
+                - CRISPR/Cas13 (c2c2) for knockdown.
+        **This tool also offers a variety of PAM sequences and other filtering options.**
+        """
+        st.markdown("**Please note that the tool was run for CRISPR/cas9 for NGG (knock-out), CRISPR/cas9-nickase (knock-out) for NGG and NRG (R=A or G), CRISPR/cpf1 for TTN, CRISPR/CasX for TTCN PAM and CRISPR/cas13(c2c2).**")
+
+        display_res(method,'\t','snp_id')            
+    #E-CRISP
+    if select_method == "E-CRISP":
+        st.markdown("**Summary**")
+        st.markdown("E-CRISP is used to design gRNA sequences **(for 12 organisms)**. E-CRISP can also be used to reevaluate CRISPR constructs for on- or off-target sites and targeted genomic loci. It identifies target sequences complementary to the gRNA ending in a 3ʹ protospacer-adjacent motif (PAM), N(G or A)G and uses a fast indexing approach to find binding sites and a binary interval tree for rapid annotation of putative gRNA target sites.")
+        st.markdown("**Off-target** effects and target-site homology are evaluated using Bowtie2 aligner. Designs are **shown** in the output if the number of **off-targets does not exceed a user-specified threshold**. **More than one** design targeting a desired locus are **ranked** according to on-target specificity and number of off-targets.")
+
+        st.write("[E-CRISP Web App](http://www.e-crisp.org/E-CRISP/)")
+        st.write("[E-CRISP Paper](https://www.nature.com/articles/nbt.3026)")
+        st.markdown(caution,unsafe_allow_html=True)
+        """
+        - Input: Multiple lines provided in the Input fasta sequence edit box in the webapp **[here](http://www.e-crisp.org/E-CRISP/index.html)** in the following format
+            - Line1: rs12726330
+            - Line2: CGGGACATGGAAGAGGTCTGGACCAGGGTACTGGGAAGGCGCTCGGAGGA
+            - Line3: rs76763715
+            - Line4: CCAGCCGACCACATGGTACAGGAGGTTCTAGGGTAAGGACAAAGGCAAAG
+            - and so on
+        """
+        st.markdown("- Output: A tab separated .tab file")
+        st.markdown("- **Columns of interest**: Efficiency Score (E Score, **Higher the better**) [Ref](https://www.nature.com/articles/nbt.3026) and Specificity Score (S Score, **Higher the better** (max = 100))")
+
+        st.markdown(tips,unsafe_allow_html=True)
+        """
+        - This tool offers single or paired sgRNA and:
+            - **Options for PAM:**
+                - **Relaxed**
+                - **Medium:**
+                - **Strict** 
+            - **Options for Design:**
+                - knockdown.
+                - knockin.
+                - N/C terminal tagging.
+                - CRISPRi.
+                - CRISPRa.
+            - **Other filtering options.**
+        """
+        st.markdown("**Please note that the result reported here are for PAM=NGG**")
+        
+        st.header(select_method)
+        fnm=cwd+select_method+'/'+select_method+'_NGG'+'.csv'
+        data = pd.read_csv(fnm, sep=',')
+        #get snp data
+        #data_snp = data[data['Name'].str.contains(variant_spl[0])]
+
+        if len(variant_spl) > 1: #variant_spl has two components
+            #data_snp = data[data['rs_id'].str.contains(variant_spl[1])]
+            data_snp = data[data['Name'].str.contains(variant_spl[1])]
+            data_snp[rsid]=variant_spl[0]+':'+data_snp[rsid]
+        else:
+            #data_snp = data[data['rs_id'].str.contains(variant_spl[0])]
+            data_snp = data[data['Name'].str.contains(variant_spl[0])]
+            data_snp['Name']='NaN'+':'+data_snp['Name']
+        data_snp.reset_index(drop=True, inplace=True)
+
+
+        data_snp.reset_index(drop=True, inplace=True)
+        if data_snp.shape[0]>0:
+            df = transform(data_snp,'Please Select columns to save whole table')
+            #fname = st.text_input('Please input file name to save Table', 'temp')
+            #fname = st_keyup("Please input file name to save Table", value='temp')
+            csv = convert_df(df)
+
+            st.download_button(
+                label="Download Table as CSV file",
+                data=csv,
+                file_name=select_method+'_'+variant_spl[0]+'.csv',#fname+'.csv',
+                mime='text/csv',
+            )
+
+        #st.table(data_snp)
+        if len(variant_spl) > 1:
+            f"""
+                **Results for SNP: {variant_spl[0]} on GENE: {variant_spl[1]}**
+            """
+        else:
+            f"""
+                **Results for SNP: {variant_spl[0]} on GENE: NAN**
+            """
+
+        #AgGrid(data_snp)
+        st.markdown(table_edit,unsafe_allow_html=True)
+        gb = GridOptionsBuilder.from_dataframe(data_snp)
+        gb.configure_pagination(enabled=False)#,paginationAutoPageSize=False)#True) #Add pagination
+        gb.configure_default_column(enablePivot=True, enableValue=True, enableRowGroup=True)
+        gb.configure_selection(selection_mode="multiple", use_checkbox=True)
+
+        gb.configure_side_bar()
+        gridOptions = gb.build()    
+
+        grid_response = AgGrid(
+            data_snp,
+                height=200,
+                gridOptions=gridOptions,
+                enable_enterprise_modules=True,
+                update_mode=GridUpdateMode.MODEL_CHANGED,
+                data_return_mode=DataReturnMode.FILTERED_AND_SORTED,
+                fit_columns_on_grid_load=False,
+                header_checkbox_selection_filtered_only=True,
+                use_checkbox=True,
+                width='100%'
+        )
+
+        #data = grid_response['data']
+        selected = grid_response['selected_rows']   
+        if selected:
+            st.write('Selected rows')
+            
+            dfs = pd.DataFrame(selected)
+            st.dataframe(dfs[dfs.columns[1:dfs.shape[1]]])
+
+            dfs1 = transform(dfs[dfs.columns[1:dfs.shape[1]]],'Please select columns to save selected Table')
+            #csv = convert_df1(dfs[dfs.columns[1:dfs.shape[1]]])
+            csv = convert_df1(dfs1)
+            
+
+            st.download_button(
+                label="Download data as CSV",
+                data=csv,
+                file_name=select_method+'_'+variant_spl[0]+'.csv',
+                mime='text/csv',
+            )
+
+        
+
+    #GuideScan2
+    if select_method == "GuideScan2":
+        st.markdown("**Summary**")
+        st.markdown("GuideScan2 employes Cas9 (tracrRNA and crRNA) and Cas12a, previously known as cpf1, (requires only crRNA) for sgRNA design for 8 organisms. It is a memory efficient and improved version of GuideScan that enables construction of high-specificity gRNA databases with reduced off-target effects.")
+        st.markdown("CRISPR-Cas9 targets a 20-nucleotide spacer sequence at the end of the gRNA that is complementary to a DNA protospacer sequence followed immediately at the 3’ end by a PAM of the form NGG (more efficient targeting) or NAG (less efficient); here N stands for a ‘wildcard’, i.e. can match any nucleotide. Other natural and engineered CRISPR-Cas systems can **vary in PAM sequence, PAM position with respect to the protospacer sequence, and requirements on the level of similarity between gRNA and the target.**")
+        st.markdown("Given a genomic region, the task of gRNA design is to find gRNAs that can target anywhere in that region. Many potential gRNAs can target at multiple locations in the genome with varying efficiency. Typically a gRNA is designed to target a particular location with **perfect complementarity** with all other targets of this gRNA are being **off-targets**. **Goal** of gRNA design is typically to **maximize gRNA efficiency at the primary target site while minimizing off-targeting.**")
+        st.markdown("Variants and extensions of the gRNA design task include: paired gRNA design to select two gRNAs targeting flanking sites of a genomic region of interest; saturation experiment design to exhaustively select all gRNAs expected to target a selected region of interest; and library design to select a small number of the most effective gRNAs for each of hundreds or thousands of regions of interest.")
+        
+        st.write("[GuideScan2 Web App](https://guidescan.com)")
+        st.write("[GuideScan2 Paper](https://www.biorxiv.org/content/10.1101/2022.05.02.490368v1)")
+        st.markdown(caution,unsafe_allow_html=True)
+        """
+        - Input: Line delimited Genomic intervals (or DNA sequence) as a text file in the webapp **[here](https://guidescan.com/)** in the following format (of genomic range 30bp, 40bp etc):
+            - Line1: chr10:11676698-11676728
+            - Line2: chr1:152220435-152220465
+            - and so on
+        """
+        st.markdown("- Output: A csv file containing all gRNAs within the genomic regions provided in the input file")
+        st.markdown("- **Columns of interest**: Cutting efficiency (**Higher the better**), Specificity (**Higher the better**) [Ref](https://www.biorxiv.org/content/10.1101/2022.05.02.490368v1.full.pdf)")
+        st.markdown(tips,unsafe_allow_html=True)
+        """
+        - This tool offers sgRNA design for:
+            - **CRISPR/Cas9**
+            - **CRISPR/Cpf1**
+            - **Please note that this tool work best for genomic intervals >30bp.**
+        """
+
+        st.markdown("**Please note that the software was run with Cas9 (NGG PAM) and cpf1 (TTG PAM) option with all other options left as default.**")
+
+        display_res(method,',','query')
+
+
+    #PnB Designer
+    if select_method == "PnB Designer":
+        st.markdown("**Summary**")
+        st.markdown("DNA base editors (BEs), cytosine base editors which employes cytidine-deaminase  (CBEs: C/G -> T/A converters) and adenine base editors which employes Adenine-deaminase (ABEs: A/T -> G/C converters) **can only introduce 4 edits** via gRNA, Prime Editors **(PEs)**, employing Cas9 nickase fused to an engineered reverse transcriptase via a gRNA called prime editing guide RNA (pegRNA), on the other hand **can do all 12 edits.** To introduce a modification in the genome, PEs use pegRNA consisting of a 20 nt guide sequence, a primer binding site (PBS) and a reverse transcriptase template (RTT). The guide directs the Cas enzyme to a target site, the PBS hybridizes to the opposite strand to prime the reverse transcriptase, and the RTT integrates the desired genomic alteration.")
+        st.markdown("Optimized PE2, called PE3 and PE3b with reduced off-targets are used")
+        st.markdown("PnB Designer allows design of pegRNAs for PEs and guide RNAs for CBE and the most recent ABEs such as ABEmax and ABE8e. PnB Designer makes it easy to design targeting guide RNAs for single or multiple targets on a variant or reference genome from organisms (and non-model organisms or synthetic constructs) spanning multiple kingdoms. It has been used PnB Designer to design candidate pegRNAs to model all human mutations in ClinVar")
+        st.markdown("**PnB Designer enables design of pegRNAs for all known disease causing mutations available in ClinVar**")
+        st.markdown("Nicking guides for the PE3 and PE3b systems are designed and filtered to provide a suitable selection of gRNAs. For PE3, only nicking guides 40–100 nt up/downstream of the initial nick are considered. For PE3b, only PAM sequences on the complementary strand that partially overlap with the PE2 PAM or protospacer sequence are displayed.")
+        st.write("[PnB Designer Web App](https://fgcz-shiny.uzh.ch/PnBDesigner/)")
+        st.write("[PnB Designer Paper](https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-021-04034-6)")
+        st.markdown(caution,unsafe_allow_html=True)
+        """
+        - Input: Multiple lines provided in as a csv file in the webapp **[here](https://fgcz-shiny.uzh.ch/PnBDesigner/)** in the following format:
+            - Prime editing:
+                - varinat, chromosome num, genomic location, Edit, gene orientation, OBS, RTT
+                - Ex: rs7412, 19, 44908822, insA, +, 13, 13
+            - Base editing
+                - varinat, chromosome num, genomic location, SNO, gene orientation, OBS, RTT
+                - Ex: rs7412, 19, 44908822, C>T, +
+        """
+        st.markdown("- Output: A csv file")
+        st.markdown(tips,unsafe_allow_html=True)
+        """
+        - This tool can be run in two modes:
+            - **Base editing mode:**
+                - Does not allow A>T or G>C, dels, or insertions.
+                - Only **180**/414 variants could be targeted. 
+                - - **Columns of interest**: Protospacer, PAM and Base Editor (the system for producing the base edit). **There is no score**.
+            - **Prime editing mode:**
+                - Requires two guides: detailed in two files.
+                - pegRNA oligos for cloning.
+                - **Score: Higer is better**.
+                - Nicking guides: the corresponding nicking guides
+        """
+        st.markdown("**Please note that the tool was run in Base editing and Prime editing modes. Corresponding nicking guides are also reported here.**")
+        display_res(method,',','query')
+
+
+    #SNP_CRISPR
+    if select_method == "SNP_CRISPR":
+        st.markdown("**Summary**")
+        st.markdown("SNP-CRISPR designs sgRNAs targeting specific SNPs or indels containing loci (for human, mouse, rat, fly and zebrafish genomes) by facilitating the design of sgRNAs that target specific variants and provides all possible CRISPR-Cas9 target sites in the given genomic region with required parameters, allowing users to select an optimal sgRNA. It provides efficiency scores and off-target information for sgRNAs targeting sequences with and without SNPs and/or indels of interest in the same genomic region.")
+        """
+        **Design:** 
+        - SNP-CRISPR validates the input reference sequences and **warn if the submitted reference sequences does not match**, which might reflect a different version of the genome assembly being used in the user input vs. SNP-CRISPR and re-constructs the template sequence, swapping the reference nucleotide with the variant nucleotide for SNPs, while inserting or deleting the corresponding fragment for indel type variants.
+        - Computes potential variant-targeting sgRNAs based on availability of PAM sequences in the neighboring region since the presence of a PAM sequence (NGG or NAG) is one of the few requirements for binding. 
+        - sgRNA designs that contain four or more consecutive thymine residues, which can result in termination of RNA transcription by RNA polymerase III, are filtered out.
+        - Computes an efficiency score (Housden et al. 2015) and a specificity score calculated based on BLAST results against the reference genome.
+        - Finally, all possible sgRNAs are provided to the user along with specificity and efficiency scores, without further filtering.
+        - For identification of the best variant-specific sgRNAs, we provide information about both sgRNAs targeting specific variants and sgRNAs targeting the reference sequence in the same region. The efficiency score and an off-target score are provided, and the positions of relevant SNPs or indels in the sgRNA are included so that users can select the most suitable sgRNA or filter out less optimal ones.
+        """
+
+        st.write("[SNP_CRISPR Web App](https://www.flyrnai.org/tools/snp_crispr/web/)")
+        st.write("[SNP_CRISPR Paper](https://academic.oup.com/g3journal/article/10/2/489/6026318)")
+        st.markdown(caution,unsafe_allow_html=True)
+        """
+        - Input: Multiple lines provided in as a (6 columns) csv file uploaded to the webapp **[here](https://www.flyrnai.org/tools/snp_crispr/web/)** in the following format:
+            - varinat, chromosome, position, strand, reference, variant
+            - Ex: rs7412, 19, 44908822, C, +, T
+        """
+        st.markdown("- Output: A csv file")
+        st.markdown("- **Columns of interest**: Housden Efficiency Score [Ref](https://www.ncbi.nlm.nih.gov/pubmed/26350902) (Range from 1.47-12.32 **(higher is better, > 5 recommended))** and Off Target Score (Range from 0-5441.73 (lower is better, < 1 recommended))")
+        st.markdown(tips,unsafe_allow_html=True)
+        """
+        - This tool can design guides for:
+            - **NGG.**
+            - **NAG.**
+            - **Target multiple variants within the same guide.**
+            - Public variant data sets or user-identified variants.
+        """
+
+        st.markdown("**Please note that the software was run for NAG and NGG PAM sequences only.**")
+        display_res(method,',','Gene')
+
+st.sidebar.image("DataTecnica_White.png", use_column_width=True)

data/ChopChop/ChopChop_CasX_TTCN.csv

@@ -0,0 +1,335 @@
+snp_id	Rank	Target sequence	Genomic location	Strand	GC content (%)	Self-complementarity	Efficiency	MM0	MM1	MM2	MM3
+rs12726330	1	TTCCCAGTACCCTGGTCCAGACCT	chr1:155135679	-	60	2	0	0	0	0	2
+rs76763715	1	TTCTAGGGTAAGGACAAAGGCAAA	chr1:155235843	+	45	0	0	1	2	1	3
+rs71630614	1	TTCTGTCACCTCTGGTTAGGAGCT	chr1:156102418	+	55	0	0	0	0	0	3
+rs71630614	2	TTCAGTCCTGGTTCTGTCACCTCT	chr1:156102407	+	55	0	0	0	0	0	15
+rs4575098	1	TTCAATGTATTAACATTTTATTGG	chr1:161185592	-	20	0	0	0	1	2	26
+rs7537669	1	TTCATTATTATCATGTCTGTGATA	chr1:207702182	+	25	0	0	3	0	7	60
+rs1171832	1	TTCACCAAGATGGCTGCTTTTAGC	chr10:59908036	+	50	0	0	0	0	0	3
+rs188789342	1	TTCCTGAACAGGTGGCGGGCGCCT	chr10:119612801	+	70	1	0	0	0	0	0
+rs117896735	1	TTCAAGGCTGCAGTGAGCTATGAC	chr10:119776815	-	55	0	0	240	673	0	>=0
+rs11039212	1	TTCAGATCATGGTCATGTCATTTC	chr11:47371733	+	40	1	0	0	0	1	5
+rs11039212	2	TTCTGAGCAGGGAAATGACATGAC	chr11:47371744	-	50	0	0	0	2	8	38
+rs10769263	1	TTCCCCCTTTGATTTATTATAGCC	chr11:47395628	-	35	0	0	0	0	1	4
+rs10769263	2	TTCATGGCTATAATAAATCAAAGG	chr11:47395623	+	30	0	0	0	0	0	8
+rs1286170	1	TTCTTAACGTGTTCAGATGGTAGG	chr11:60064447	+	45	0	0	0	0	0	1
+rs1286170	2	TTCAGATGGTAGGTCAGCAGATCA	chr11:60064458	+	50	0	0	0	0	0	2
+rs580064	1	TTCACAGTGCTTTTTTATACAATG	chr11:60101639	+	30	0	0	0	171	121	>=3
+rs55661415	1	TTCTACCAACCTAACTACAAGGGA	chr11:60184833	+	45	0	0	0	0	0	2
+rs55661415	2	TTCTCCCTTGTAGTTAGGTTGGTA	chr11:60184836	-	45	0	0	0	0	1	2
+rs55661415	3	TTCCAGAGTCTGAATTCTACCAAC	chr11:60184819	+	40	0	0	0	0	0	8
+rs652303	1	TTCGGTTTGGGTAATAGCTCTCAG	chr11:60202554	-	45	0	0	0	0	0	4
+rs2044981	1	TTCATCTGAAAAACTATATAGTAT	chr11:60292522	+	20	0	0	0	0	1	18
+rs7945487	1	TTCGGTGTGTTCCCACCCAAGTCT	chr11:60322885	-	55	1	0	0	0	7	>=67
+rs572979	1	TTCCCGAAGTGCTGCGATTACAGG	chr11:86092226	-	55	0	0	1	287	60	>=0
+rs67598967	1	TTCTTAAGAATGACCAGGCCCGGC	chr11:86132156	-	60	0	0	0	0	0	1
+rs11603136	1	TTCAAACAGCATATATTGTAGAAC	chr11:86163275	+	30	0	0	0	0	0	16
+rs11603136	2	TTCTACAATATATGCTGTTTGAAT	chr11:86163274	-	25	0	0	0	0	1	16
+rs11223616	1	TTCATATAAGCCATGGGAGGGGCG	chr11:133902925	-	60	0	0	0	0	0	1
+rs564123	1	TTCCCCCTGTATTTGGGTTTCTCT	chr11:133949502	-	45	0	0	0	0	0	26
+rs539604877	1	TTCTCCTAATGCTATTCCCTCCCC	chr12:39726287	+	55	0	0	2	19	172	>=84
+rs893136227	1	TTCAAGCATCCACAATAGATTGGA	chr12:39936291	-	40	0	0	0	0	0	3
+rs893136227	2	TTCCAATCTATTGTGGATGCTTGA	chr12:39936290	+	35	0	0	0	1	0	4
+rs893136227	3	TTCTAGTTCAAGCATCCACAATAG	chr12:39936297	-	40	0	0	0	0	0	7
+rs1491942	1	TTCCAGGCTCCCCTGGGTTGTCAA	chr12:40227002	-	60	2	0	0	0	0	4
+rs28903073	1	TTCTGTCGACTAAATGTAAATCTT	chr12:40259704	+	30	0	0	0	0	0	2
+rs34637584	1	TTCTACAGCAGTACTGAGCAATGC	chr12:40340401	-	50	0	0	0	0	1	6
+rs75505347	1	TTCGTCTTACGATCATAATTGGAC	chr12:40491734	-	35	1	0	0	0	3	2
+rs1002038473	1	TTCCTAAAAAGTCCACATTTGGCT	chr12:41036427	-	35	0	0	0	0	1	5
+rs117027576	1	TTCTATGGAATTATTGGTGGCTCC	chr12:56922819	+	45	0	0	0	0	0	2
+rs117027576	2	TTCCATAGAATAAGTAACTTAACA	chr12:56922805	-	20	0	0	0	0	0	8
+rs113247976	1	TTCTGGCGGCCCCTTGGCTTCCTA	chr12:57581906	+	70	0	0	0	0	0	1
+rs113247976	2	TTCTGGTAGGAAGCCAAGGGGCCG	chr12:57581912	-	70	0	0	0	0	0	1
+rs116900480	1	TTCTTAACTCTTTGTCATGTAACT	chr12:58262313	+	30	0	0	0	0	1	14
+rs41292019	1	TTCCACGAAAGACATTTGCAGTAG	chr12:64455926	-	40	0	0	0	0	0	1
+rs12589020	1	TTCCCACGCTTCAGCTCTCTTGCT	chr14:52845268	+	55	0	0	0	0	1	5
+rs12589020	2	TTCAGCTCTCTTGCTGGTTATCTG	chr14:52845277	+	50	0	0	0	0	0	10
+rs61977311	1	TTCTACGATGCTCTATTTGGTCTC	chr14:92464101	-	45	0	0	0	0	0	1
+rs12590654	1	TTCTATGTGAAGTAACTCAGGAAC	chr14:92472511	-	40	0	0	0	69	335	>=17
+rs12590654	2	TTCCGTTCCTGAGTTACTTCACAT	chr14:92472507	+	40	0	0	2	86	462	>=7
+rs12590654	3	TTCCTGAGTTACTTCACATAGAAT	chr14:92472512	+	30	0	0	15	454	14	>=0
+rs3098199	1	TTCCTGAAGGAAAGAAAGCATGGA	chr15:50529047	-	40	2	0	0	0	1	27
+rs3098199	2	TTCTTTCCTTCAGGAAATCTTTAT	chr15:50529055	+	30	2	0	0	1	14	236
+rs3098199	3	TTCCTTCAGGAAATCTTTATTGAT	chr15:50529059	+	25	0	0	0	1	19	>=309
+rs7168776	1	TTCACAATATTTTCTTGATATCTT	chr15:58583182	+	20	0	0	0	0	7	61
+rs7168776	2	TTCTTTTTCACAATATTTTCTTGA	chr15:58583176	+	20	0	0	0	0	2	91
+rs7168776	3	TTCTTGATATCTTTGTTCATTTCT	chr15:58583193	+	25	0	0	0	0	15	217
+rs117618017	1	TTCACCATCGCCACCGAGCCGTTG	chr15:63277690	+	70	0	0	0	1	0	0
+rs11862962	1	TTCAAGTGATCCGCCCGCCTCATC	chr16:30898383	+	65	0	0	1	40	194	>=27
+rs8050588	1	TTCCCCGATCCCTACTGTGTGCTG	chr16:30926460	-	60	0	0	0	0	0	3
+rs28725459	1	TTCGAGACCAGCCTGACCAATATG	chr16:31121320	-	50	0	0	719	0	0	>=0
+rs1724425	1	TTCCACTCTTCCAGACAAATCCCT	chr17:45704379	+	45	0	0	1	0	0	8
+rs34186148	1	TTCTACCAAAGCGCTTTCTAGCTC	chr17:45777277	+	50	0	0	0	2	0	2
+rs3935637	1	TTCAGTACAGGTATATGTGTGTGG	chr17:45851196	-	45	0	0	1	1	2	8
+rs713522	1	TTCCCTGCCCCCTGCCCCCAGCAC	chr17:45987893	-	80	0	0	0	4	4	67
+rs8067056	1	TTCACCATGTTAGCCAGTCCAATT	chr17:46006580	-	45	0	0	1	1	6	199
+rs7225002	1	TTCTTCTGAGAATTGAGATGTCAT	chr17:46111681	-	35	0	0	2	0	1	10
+rs7225002	2	TTCTTTCTTCTGAGAATTGAGATG	chr17:46111685	-	35	0	0	1	1	0	16
+rs7225002	3	TTCTGAGAATTGAGATGTCATCTT	chr17:46111678	-	35	0	0	1	0	0	22
+rs7225002	4	TTCTCAGAAGAAAGAACATTGTAT	chr17:46111693	+	30	0	0	1	1	1	29
+rs916888	1	TTCCCTCTGACTGAGGTATAGTCT	chr17:46785757	-	45	1	0	1	1	0	2
+rs61572747	1	TTCAGGGTGTTTATGGAGGCTTTA	chr17:74019	-	45	0	0	29	3	7	34
+rs8067056	1	TTCCGGTTTGGAGCCTTTGATGTA	chr17:781795	-	45	0	0	0	0	0	4
+rs34186148	1	TTCCACCCCCGACCCATCCTGACA	chr17:1010915	+	65	0	0	2	0	0	2
+rs7207400	1	TTCACCATGTTGGCCAGGCTGGTC	chr17:1041114	+	65	0	0	1200	0	0	>=0
+rs1724425	1	TTCTCAGCTGTCTCCAGAGCGACT	chr17:1083560	+	60	0	0	2	0	1	6
+rs61572747	1	TTCAGGGTGTTTATGGAGGCTTTA	chr17:74019	-	45	0	0	29	3	7	34
+rs3935637	1	TTCTCCACTACACAGCAGCGTGCA	chr17:553319	-	60	0	0	0	4	0	6
+rs713522	1	TTCAGCGCAAAGTGCCAGACCCAA	chr17:690013	-	60	0	0	0	0	0	0
+rs4588066	1	TTCTTATATGTAAGCAGGGTTATA	chr18:43092983	+	30	0	0	0	0	1	3
+rs1141534	1	TTCTCGCCCTGGCGGGGAAGGTGA	chr19:1032677	+	75	1	0	0	0	1	13
+rs1141534	2	TTCCCCGCCAGGGCGAGAAGAGAC	chr19:1032672	-	70	1	0	0	10	3	0
+rs12975883	1	TTCAAGCGATTCTCCTGTCTCAGC	chr19:17643108	+	55	0	0	414	247	0	>=0
+rs80257887	1	TTCCCTGACCACTAGGGGTTGGGA	chr19:44516778	+	60	0	0	0	0	0	1
+rs112027066	1	TTCAGTTACCTCCTACCGGGTCCC	chr19:44625786	-	65	0	0	7	145	182	>=33
+rs203709	1	TTCCTGGGTTACAAGGTTGGAGCC	chr19:44658288	-	55	0	0	0	0	0	4
+rs111780744	1	TTCATTTAGCGTCTTGCTTCCATG	chr19:44663671	-	45	0	0	0	0	0	8
+rs2965163	1	TTCCGTGCCGGGCCTGCCTCAGAG	chr19:44697241	-	75	0	0	0	0	0	3
+rs2965164	1	TTCTTATGACCTGCATCCTGATGG	chr19:44698766	-	50	0	0	0	0	0	1
+rs111278137	1	TTCAAAAATAGAGACGGGATTTTG	chr19:44711801	-	35	0	0	0	0	3	16
+rs73037426	1	TTCCTCGGGGCCTTTGCACTGGCT	chr19:44719509	+	65	0	0	0	3	15	>=19
+rs150820726	1	TTCCATTCACCCTGCATGTGGCAG	chr19:44723884	-	55	0	0	0	0	0	5
+rs150820726	2	TTCACCCTGCATGTGGCAGCTGGG	chr19:44723879	-	70	1	0	0	0	0	7
+rs80307900	1	TTCCCCTCTAAAAGCTCATAAAGC	chr19:44731939	-	40	0	0	0	0	0	5
+rs2965102	1	TTCCATCCTGTGCAAAGGGAGGAC	chr19:44732690	+	55	1	0	0	0	0	2
+rs2965102	2	TTCCTCAGGTTCCATCCTGTGCAA	chr19:44732681	+	50	1	0	0	0	2	3
+rs12459810	1	TTCACCTCCTCCCTCCAAACCTCG	chr19:44746382	+	65	0	0	0	0	2	15
+rs10401176	1	TTCCCCGTCTGTGTGATGGGTTGG	chr19:44750229	+	60	0	0	0	0	2	3
+rs140414737	1	TTCCCAAGGGAGGTGGTAACTCTG	chr19:44770811	+	55	0	0	0	0	0	7
+rs2889414	1	TTCTAGACCAGCCTGATCAACATG	chr19:44794664	-	50	0	0	662	5	0	>=0
+rs2889414	2	TTCACCATGTTGATCAGGCTGGTC	chr19:44794659	+	55	0	0	671	211	0	>=0
+rs28534944	1	TTCTGGGCTCAAGTGATCCTCCCT	chr19:44797830	+	60	0	0	38	336	15	>=0
+rs111794050	1	TTCGTATTTTTCATAGAGACAGGG	chr19:44799501	+	35	0	0	5	82	164	>=0
+rs111794050	2	TTCATAGAGACAGGGTTTCACCAT	chr19:44799510	+	45	0	0	426	101	0	>=0
+rs1135062	1	TTCCACTTCGGCACCGGTGAGTGA	chr19:44819475	+	60	0	0	0	0	0	0
+rs1135062	2	TTCGGCACCGGTGAGTGACTGAGG	chr19:44819481	+	65	0	0	0	0	0	2
+rs34978331	1	TTCTTTCCTACCTCTTTTTTTCTT	chr19:44829583	+	30	0	0	0	6	177	>=317
+rs56394238	1	TTCTTTTTTGGGGGGATGGGGGGA	chr19:44832404	+	60	0	0	0	1	19	78
+rs1466435	1	TTCTCTTTACTTCCTGGAGCCCCA	chr19:44839537	-	55	0	0	0	0	0	13
+rs55840414	1	TTCGCAGTTTTATTAGAGACGGGG	chr19:44840301	-	45	0	0	0	0	82	>=200
+rs7255063	1	TTCCATTCCTACACGTGTCTCTGA	chr19:44849150	-	45	0	0	0	0	0	3
+rs7255063	2	TTCCTACACGTGTCTCTGACCCCA	chr19:44849145	-	55	0	0	0	0	0	5
+rs7255063	3	TTCTATCCTCTGATTCCATTCCTA	chr19:44849163	-	40	0	0	0	0	2	10
+rs35396326	1	TTCCAACACTTTGGGAGGCCGAGG	chr19:44853735	-	60	1	0	318	71	0	>=0
+rs365653	1	TTCTATCGCCCATGTTGGAGTGCA	chr19:44858378	+	55	0	0	1	7	244	>=139
+rs12978931	1	TTCGGCCCCAGAGACGGTTTGCAG	chr19:44860430	+	65	0	0	0	0	0	2
+rs12978931	2	TTCTGCTCACTGCAAACCGTCTCT	chr19:44860439	-	55	0	0	0	0	2	20
+rs138607350	1	TTCAGTGGCTTTAAGTATATTTGG	chr19:44860553	-	35	0	0	0	2	10	117
+rs41290100	1	TTCCATTCCTGGAACGCGCCCAGC	chr19:44867676	-	65	2	0	0	0	0	2
+rs41290100	2	TTCCTGGAACGCGCCCAGCTCCCA	chr19:44867671	-	70	2	0	0	0	0	3
+rs41290102	1	TTCTCCCCTCTCGTCCCAGCTCCC	chr19:44867920	-	75	0	0	0	2	0	28
+rs34278513	1	TTCCTCTTTGGCTCCGTGCCTTGG	chr19:44874879	-	60	0	0	0	0	1	2
+rs387976	1	TTCCTGAAGAGGTGTCTGTTTTCC	chr19:44875792	-	45	0	0	0	0	0	12
+rs73050293	1	TTCTGCAGGCATTATCTGAAGGCA	chr19:44876482	-	50	0	0	0	0	0	1
+rs73050293	2	TTCAGATAATGCCTGCAGAAACGT	chr19:44876486	+	45	0	0	0	0	0	18
+rs59007384	1	TTCAGTCCCCCCAACCCTGTCTGG	chr19:44893399	-	70	0	0	0	0	0	6
+rs10119	1	TTCCGGAATTGAGGGGCACGCAGG	chr19:44903412	+	65	0	0	2	1	1	0
+rs10119	2	TTCCGGAATCCCTCCCGGGACCCC	chr19:44903396	-	75	2	0	0	3	0	3
+rs75627662	1	TTCATTTTTTTTCTGCTGTCATTA	chr19:44910317	+	25	0	0	0	0	12	87
+rs72654437	1	TTCCCAGACCCCACAAGAATAGCA	chr19:44912829	-	50	0	0	0	0	0	8
+rs72654437	2	TTCTTGTGGGGTCTGGGAAGCAGA	chr19:44912834	+	60	1	0	0	0	1	12
+rs111789331	1	TTCTCATGCCTCAGCCTCCCAAGT	chr19:44923869	-	60	0	0	366	47	0	>=0
+rs139136389	1	TTCTCATGCCTCAGCCTCCCAAGT	chr19:44923869	-	60	0	0	366	3	0	>=0
+rs4803771	1	TTCAGCCTACTCATGTCCCTAAAA	chr19:44924382	+	45	0	0	0	0	0	6
+rs117664574	1	TTCCAAGGGGTCGAGTGGATGTTG	chr19:44924511	-	55	1	0	0	0	0	0
+rs7260330	1	TTCTATTTTTAATGTTTTGAGGAA	chr19:44932942	-	20	0	0	22	335	27	>=0
+rs4263041	1	TTCGTAAAGATGGAGTTTCACCAT	chr19:44935386	-	35	0	0	2	50	90	>=0
+rs4263041	2	TTCGAAACCAACCTGACCAACATG	chr19:44935365	+	45	0	0	29	625	56	>=0
+rs4263041	3	TTCACCATGTTGGTCAGGTTGGTT	chr19:44935370	-	50	1	0	33	667	20	>=0
+rs8102895	1	TTCTCCCAGCCCGTTTGTTTCCAC	chr19:44955183	-	60	0	0	0	0	1	9
+rs2239375	1	TTCAGGGACAGCTTAGGAAATGTT	chr19:44956581	+	45	0	0	0	0	0	4
+rs2239375	2	TTCCTAAGCTGTCCCTGAAGCCAG	chr19:44956576	-	55	0	0	0	0	0	4
+rs145639166	1	TTCCTTTGGCTAGAATGTCTTCAC	chr19:44965848	+	40	0	0	0	0	0	5
+rs145639166	2	TTCACATGGCCATGGCCAGCTGCA	chr19:44965867	+	65	3	0	0	0	2	41
+rs73558179	1	TTCCACCCCTCCACACCCCATCAC	chr19:44973243	-	65	0	0	0	0	4	14
+rs35577563	1	TTCAGGATCGAGAGGTTGGCAGGG	chr19:45001086	-	65	0	0	0	0	1	2
+rs35912475	1	TTCCTAGAGGTGATTAATGAGATT	chr19:45019475	-	30	0	0	0	0	5	22
+rs4803791	1	TTCCACGTCTCAGGCTTAAGTGAT	chr19:45020306	+	45	0	0	0	0	26	>=255
+rs142380271	1	TTCACCATGTTAGCCAGGCTGGTC	chr19:45021769	+	60	1	0	755	195	0	>=0
+rs142380271	2	TTCCAGACCAGCCTGGCTAACATG	chr19:45021774	-	55	2	0	757	442	0	>=0
+rs76856627	1	TTCTGTTTGTTGTAGCATACTGTG	chr19:45040481	+	40	0	0	0	0	1	2
+rs112481437	1	TTCCTCTGCACCATCCCTCCACCT	chr19:45045868	-	60	0	0	0	0	0	13
+rs112481437	2	TTCCTTCCTCTGCACCATCCCTCC	chr19:45045872	-	60	0	0	0	0	5	50
+rs143161810	1	TTCTCGTGCCCTCAGCCTCCTGAG	chr19:45063551	+	70	2	0	0	106	97	>=106
+rs143161810	2	TTCCAGCTACTCAGGAGGCTGAGG	chr19:45063560	-	60	0	0	642	21	0	>=0
+rs7251911	1	TTCCAAGCCTGCGAGCCAGCCCGC	chr19:45079136	+	75	0	0	0	0	0	0
+rs118062675	1	TTCGAGATGAGTCTTGCTCTGTCG	chr19:45086863	+	50	0	0	0	0	6	>=30
+rs76271385	1	TTCAGCAAGTGACCAATGACCCCA	chr19:45109580	-	55	0	0	0	0	0	3
+rs76271385	2	TTCTGCCATCTTCAGCAAGTGACC	chr19:45109590	-	55	0	0	0	0	3	8
+rs145903417	1	TTCTGGCCTCAGACCTCTTCGTCC	chr19:45125847	+	65	0	0	0	0	0	4
+rs79018068	1	TTCCATGCACAATTTCACTTGGCC	chr19:45131572	-	45	0	0	0	0	1	9
+rs75463276	1	TTCAAGTCCTAGCCCCTGGCTCAG	chr19:45135575	-	65	0	0	0	0	1	9
+rs78073763	1	TTCCCTTTTTCCGGTCGGTCTGCG	chr19:45146571	+	60	0	0	0	0	0	0
+rs78073763	2	TTCCGGTCGGTCTGCGATGAGCTG	chr19:45146579	+	65	0	0	0	0	0	1
+rs1005451	1	TTCAACCCCCAACAGTAAGAAAGG	chr19:45148815	-	50	0	0	0	0	0	3
+rs1005451	2	TTCTTACTGTTGGGGGTTGAATTG	chr19:45148818	+	45	0	0	0	0	2	7
+rs12460985	1	TTCTCACAGTCGAGCAGCTTCCTC	chr19:45187623	-	60	0	0	0	0	0	1
+rs62118471	1	TTCCAGGACCCCCACTGATGCCCC	chr19:45187776	+	70	0	0	0	0	0	7
+rs62118471	2	TTCCTTCCAGGACCCCCACTGATG	chr19:45187772	+	60	0	0	0	0	1	18
+rs149495476	1	TTCTCATGTTGTTTGTATATTGGT	chr19:45193374	+	30	0	0	0	0	0	25
+rs73566243	1	TTCCTTTTGCTGTGTAGTCACTGA	chr19:45193744	+	40	0	0	0	0	0	13
+rs73566243	2	TTCAGTGACTACACAGCAAAAGGA	chr19:45193745	-	45	0	0	0	0	1	13
+rs117783785	1	TTCTGATTAGAATGCTCTCCAAGA	chr19:45195918	-	40	0	0	0	0	1	6
+rs117783785	2	TTCTAATCAGAATGAAAAACAGCT	chr19:45195930	+	30	0	0	0	0	3	21
+rs117783785	3	TTCATTCTGATTAGAATGCTCTCC	chr19:45195922	-	40	0	0	0	0	4	66
+rs2627642	1	TTCATTAAGCCTCTTTTTCTTTAT	chr19:45202298	+	25	0	0	4	127	60	>=13
+rs2627642	2	TTCTTTATTAATTACCCAGTCTCA	chr19:45202314	+	30	0	0	40	540	26	>=0
+rs185181700	1	TTCTGAGCCCAGCAAGGCACCAGG	chr19:45203194	+	70	0	0	0	0	5	19
+rs185181700	2	TTCTGGGCAAGTCCTGGTGCCTTG	chr19:45203206	-	65	0	0	0	0	8	23
+rs11667509	1	TTCTGTACAGGGAGTTTGGGGTTG	chr19:45212910	+	55	0	0	0	0	0	3
+rs11667509	2	TTCACCCAACCCCAAACTCCCTGT	chr19:45212916	-	60	0	0	0	0	1	18
+rs346751	1	TTCTAGGCTCTTAAGTAGCATTGA	chr19:45231155	+	40	0	0	0	0	0	0
+rs346751	2	TTCCAGCCACAGAAATCAGTCAAT	chr19:45231174	-	40	0	0	0	1	2	51
+rs346750	1	TTCTAGGACTGCAAGCGTCCATGG	chr19:45233961	+	60	1	0	0	0	1	3
+rs345421	1	TTCACTCCTCCTGTCCCCTCCCCC	chr19:45266489	-	75	0	0	0	0	12	148
+rs12973246	1	TTCTCGGTCCCGGCAAGGAGCGAT	chr19:45332932	-	70	0	0	0	0	0	0
+rs12973246	2	TTCTCTTTCTCGGTCCCGGCAAGG	chr19:45332938	-	65	0	0	0	0	0	1
+rs77988534	1	TTCACCCTCATACCCACAGCCTGA	chr19:45341241	-	60	0	0	0	0	1	12
+rs10423015	1	TTCTGTGGTTTGCACTTGTGTATC	chr19:45451771	+	45	0	0	0	0	1	11
+rs76763715	1	TTCTTAAGTGGGACAACTACAAGT	chr1:40843	-	40	0	0	2	0	0	5
+rs76763715	2	TTCTTTGTTTCTTAAGTGGGACAA	chr1:40851	-	35	0	0	2	0	2	18
+rs75548401	1	TTCCCCTCATGTTTATCCAGTGCT	chr1:41249	+	45	0	0	1	1	0	6
+rs55636820	1	TTCAGAACCACCCGGGGCACTTGG	chr2:127054667	+	70	0	0	0	0	0	2
+rs55636820	2	TTCGGGGGCTTCAGAACCACCCGG	chr2:127054658	+	70	0	0	0	0	0	2
+rs1060743	1	TTCTTTTTGGCAGTTTGAAGGGAC	chr2:127068946	+	45	0	0	0	0	0	4
+rs1060743	2	TTCAAACTGCCAAAAAGAAGGATG	chr2:127068941	-	40	0	0	0	0	0	8
+rs1060743	3	TTCATCCTTCTTTTTGGCAGTTTG	chr2:127068939	+	40	0	0	0	0	1	26
+rs11693422	1	TTCAGCGTTCCCTCATGCTCAGAG	chr2:127084583	+	60	0	0	0	0	0	2
+rs7594230	1	TTCATAGCTTGTGGGCGTGTTGAT	chr2:127115984	-	50	0	0	0	0	0	1
+rs58682665	1	TTCAGTGTTGAATCTTCCAACCTA	chr2:127127668	+	40	1	0	0	0	1	6
+rs58682665	2	TTCAACACTGAAAAGATGTCAGTT	chr2:127127656	-	35	0	0	0	0	3	25
+rs58682665	3	TTCATAGGTTGGAAGATTCAACAC	chr2:127127672	-	40	0	0	0	2	6	78
+rs57891859	1	TTCCCAAGCACACCCACAGGGAGC	chr2:134707041	+	65	0	0	0	0	0	5
+rs6705834	1	TTCTTCCCCATGTATTATCCCCAA	chr2:233113096	+	45	0	0	0	0	0	3
+rs6705834	2	TTCCCCATGTATTATCCCCAAGAA	chr2:233113099	+	40	0	0	0	0	0	6
+rs6127744	1	TTCTTCCAAGCCAGGCTCAAGTTC	chr20:56411205	-	55	1	0	0	0	0	5
+rs6127744	2	TTCCAAGCCAGGCTCAAGTTCTAT	chr20:56411202	-	45	1	0	0	0	1	4
+rs73177394	1	TTCACCGTAGTTGGAATTTTCCCC	chr3:182990293	+	50	1	0	0	0	0	2
+rs73177394	2	TTCCAACTACGGTGAAGTTACAAG	chr3:182990285	-	40	0	0	0	0	1	2
+rs6599388	1	TTCCCCAGGCCCCCGCCGTCTCTG	chr4:945284	+	80	0	0	0	0	0	0
+rs6599388	2	TTCTGTTTCCCCAGGCCCCCGCCG	chr4:945278	+	80	0	0	0	0	0	4
+rs3733344	1	TTCCCGATGTTGAAGGACGACACT	chr4:957252	+	50	0	0	0	0	0	0
+rs3733344	2	TTCACTTCCCGATGTTGAAGGACG	chr4:957247	+	55	1	0	0	0	0	0
+rs3733344	3	TTCAACATCGGGAAGTGAAGGACA	chr4:957242	-	50	0	0	0	0	0	2
+rs34311866	1	TTCCAGCTGGCCATGTGGACCACG	chr4:958146	+	65	1	0	0	0	0	2
+rs17783233	1	TTCTAAAATGTGTCCCCAGGGTTT	chr4:982811	-	45	0	0	0	0	0	6
+rs4373155	1	TTCTGCATACACACAGACCAGCTT	chr4:11021160	-	50	1	0	0	0	2	2
+rs9291637	1	TTCCCCTCCTGGTGGCTTGGAACT	chr4:15722024	+	60	0	0	0	0	0	3
+rs9291637	2	TTCCAAGCCACCAGGAGGGGAAGG	chr4:15722022	-	65	0	0	0	0	0	4
+rs9291637	3	TTCCCTTCCCCTCCTGGTGGCTTG	chr4:15722019	+	65	0	0	0	0	0	6
+rs12640185	1	TTCTATATCCCAAATTTTCTTTTT	chr4:76211188	-	20	0	0	0	2	8	78
+rs6811535	1	TTCTTTCTTTTTTTTTGAGACGGA	chr4:76277482	-	30	0	0	136	147	22	>=0
+rs6811535	2	TTCTTTTTTTTTGAGACGGAGTCT	chr4:76277478	-	35	0	0	352	33	0	>=0
+rs1430961	1	TTCAAACTACATAAAACCTTGAGT	chr4:89631745	+	30	0	0	0	0	0	4
+rs1430961	2	TTCAACTATTACTCAAGGTTTTAT	chr4:89631755	-	25	0	0	0	0	0	8
+rs72657707	1	TTCAGTGAACAATGAAAGTGCCTG	chr4:89657351	+	45	0	0	0	0	0	9
+rs72657707	2	TTCACTGAATCTTAAAATTATGGA	chr4:89657336	-	25	0	0	0	0	1	17
+rs72657707	3	TTCATTGTTCACTGAATCTTAAAA	chr4:89657343	-	25	0	0	0	0	1	17
+rs114088559	1	TTCCGTGGCTTGTGGCTCCCTACC	chr4:89689153	+	65	0	0	0	0	15	44
+rs3933594	1	TTCCCCGCCCTGTGTCCAAGTGTT	chr4:89715250	-	60	0	0	277	69	1	>=0
+rs72503734	1	TTCATACCGGGGATGCAGGGTTGC	chr4:89778608	+	65	0	0	0	0	21	>=285
+rs10516853	1	TTCACGATATCAAACAAAAACATT	chr4:89945666	+	25	0	0	0	0	1	6
+rs10514906	1	TTCACAGTAAGATCCAGTTGTATT	chr5:61178743	-	35	0	0	0	0	0	6
+rs1980493	1	TTCTCAACATGCGCTCCCATGGCT	chr6:32395424	+	60	0	0	7	1	0	3
+rs9268544	1	TTCTCATCACACGAGAATAACAGC	chr6:32417664	-	45	1	0	4	3	0	2
+rs9268544	2	TTCTCGTGTGATGAGAATCTCAAG	chr6:32417671	+	45	1	0	3	4	0	4
+rs149839148	1	TTCATTGTTGGAAAAAAAATATCA	chr6:32613945	+	20	0	0	0	1	4	47
+rs510205	1	TTCCCACCGCATGTATTTCCCCCC	chr6:32616917	+	60	0	0	3	2	7	16
+rs510205	2	TTCTCACTCTGGTAACATCTTCCC	chr6:32616898	+	50	0	0	12	38	32	21
+rs2858331	1	TTCCAAAAAAGGAATATTGCTCCA	chr6:32713487	+	30	0	0	4	2	0	13
+rs2858331	2	TTCCTTTTTTGGAACTTTACTTCT	chr6:32713477	-	25	1	0	4	0	1	41
+rs3957148	1	TTCAAGTTAACTACTACTGCATTT	chr6:32714345	+	30	0	0	3	3	1	8
+rs9275614	1	TTCTGCATTGCCATAAGGACATTT	chr6:32716474	+	40	0	0	6	0	3	7
+rs9395259	1	TTCACCATGTTAGCCAGGCTGGTC	chr6:47440232	-	60	1	0	755	3	0	>=0
+rs9395259	2	TTCGAGACCAGCCTGGCTAACATG	chr6:47440227	+	55	2	0	758	166	0	>=0
+rs1967688	1	TTCATTGCTATAAAGAAGTATTTT	chr6:3704516	-	20	0	0	0	0	9	71
+rs1967688	2	TTCTGTATTAGTTAGTTCTTTCAT	chr6:3704535	-	25	0	0	0	0	17	78
+rs1967688	3	TTCTTTATAGCAATGAAAGAACTA	chr6:3704523	+	25	0	0	0	5	141	>=216
+rs1967688	4	TTCTTTCATTGCTATAAAGAAGTA	chr6:3704520	-	25	0	0	1	54	295	>=10
+rs1980493	1	TTCTGAAAACCAAAGCAACAAGGT	chr6:3727661	+	40	0	0	0	0	0	4
+rs3806157	1	TTCCCGACATCTCATTACAGATGA	chr6:3738246	-	40	0	0	0	0	0	6
+rs9268840	1	TTCACCCCATGGGGTGGTGGAGTA	chr6:3793265	+	65	1	0	0	0	0	2
+rs1980493	1	TTCCCCAGTGCATCCTGTGTTTTA	chr6:3833526	+	45	0	0	0	0	1	13
+rs9268544	1	TTCATTAAAATAAACCAGGAAATG	chr6:3855753	+	25	0	0	0	0	12	36
+rs149839148	1	TTCTACTTTCATTTATAATTGGGG	chr6:4032347	-	30	0	0	0	0	2	19
+rs149839148	2	TTCATTTATAATTGGGGATTTTTT	chr6:4032340	-	20	0	0	0	0	3	41
+rs9275111	1	TTCAAGGTGTTACAGGCTCAACAA	chr6:4095276	+	45	0	0	0	0	2	8
+rs2858331	1	TTCTAAGAGCCACTGAAAGTATGT	chr6:4126772	+	40	0	0	0	0	0	7
+rs2858331	2	TTCTTTATTCTAAGAGCCACTGAA	chr6:4126765	+	35	0	0	0	0	0	11
+rs1967688	1	TTCTTACAACGAAGTAATTGGACT	chr6:3613388	-	35	0	0	0	0	0	2
+rs1967688	2	TTCCTTCTTACAACGAAGTAATTG	chr6:3613392	-	30	1	0	0	0	0	3
+rs1967688	3	TTCGTTGTAAGAAGGAACAAGTTA	chr6:3613399	+	30	0	0	0	0	0	12
+rs3806157	1	TTCACCAACAGTGCACGAGGTGCC	chr6:3647080	+	65	1	0	0	0	0	1
+rs3806157	2	TTCATGGGCACCTCGTGCACTGTT	chr6:3647086	-	60	1	0	0	0	0	2
+rs9268544	1	TTCTACAAGGAGGCAGTGACTCTA	chr6:3657967	+	50	0	0	0	0	0	5
+rs482044	1	TTCTGTTAATGTTGATATTTTACC	chr6:3846648	+	25	0	0	0	4	48	>=38
+rs482044	2	TTCTTCCAAACTTCTGTTAATGTT	chr6:3846637	+	30	0	0	34	283	13	>=0
+rs482044	3	TTCCAAACTTCTGTTAATGTTGAT	chr6:3846640	+	25	0	0	23	292	38	>=0
+rs149839148	1	TTCCCAATTCAAAGGTCACACCCA	chr6:3852323	+	45	0	0	0	0	0	4
+rs1967688	1	TTCAGCTGTTCTGCTCTGGTTTCT	chr6:3677269	+	50	0	0	7	314	9	>=0
+rs1967688	2	TTCTGCTCTGGTTTCTCCCCATCT	chr6:3677277	+	55	0	0	307	4	0	>=0
+rs1980493	1	TTCGCGTGGGTTGCCTCCTCTAAC	chr6:3700423	+	60	0	0	0	0	0	3
+rs3806157	1	TTCTAGATCAATCTCTAATATGGA	chr6:3711018	+	30	0	0	0	0	0	5
+rs9268544	1	TTCACTGAAGAAGTTTTACTGTTA	chr6:3721911	-	30	0	0	0	0	0	13
+rs9268840	1	TTCAGACAGAAGGGTGACGTGGGA	chr6:3765255	-	60	0	0	0	0	0	1
+rs9268840	2	TTCTGTCTGAAACAAATAATCACG	chr6:3765268	+	35	0	0	0	0	0	4
+rs482044	1	TTCACCTAACTTCTAATCTCCACA	chr6:4021039	+	40	0	0	0	0	0	5
+rs482044	2	TTCTAATCTCCACAGCCAATCAGT	chr6:4021049	+	45	0	0	0	0	0	7
+rs482044	3	TTCCAAGAACTGATTGGCTGTGGA	chr6:4021057	-	45	1	0	0	0	1	12
+rs149839148	1	TTCTGCTCATATAGTGCTTACATT	chr6:4026710	+	35	0	0	0	0	0	8
+rs33915496	1	TTCTAGGAGTGGGTAGTTGAGAGA	chr6:4028944	-	50	0	0	0	0	0	5
+rs9275111	1	TTCGGTACAGGACAGGTGGGAGGA	chr6:4101484	+	60	0	0	0	0	0	3
+rs3957148	1	TTCAGCTGCACATGAATAGAACAG	chr6:4133659	-	45	0	0	0	0	0	1
+rs3957148	2	TTCTATTCATGTGCAGCTGAACTA	chr6:4133662	+	40	0	0	0	0	0	10
+rs3957148	3	TTCTGACTGGCTCTCATTGCTGTT	chr6:4133640	+	50	0	0	0	0	1	20
+rs1980493	1	TTCTCCCCAGTATTCTAGATCGGA	chr6:3737183	-	50	0	0	0	0	0	0
+rs1980493	2	TTCTAGATCGGAAGTTGTGCTCAC	chr6:3737171	-	50	0	0	0	0	0	0
+rs1980493	3	TTCCGATCTAGAATACTGGGGAGA	chr6:3737182	+	45	0	0	0	0	0	3
+rs3806157	1	TTCTGGTTGGGAGAAATCCAATAG	chr6:3747780	-	45	0	0	0	0	0	4
+rs9268840	1	TTCCATTCCTTACAGTTGGTAGTA	chr6:3801888	-	35	0	0	0	0	0	2
+rs3957148	1	TTCAGGATACAAAATCAACATACA	chr6:4013074	+	30	0	0	136	143	18	>=0
+rs1967688	1	TTCTATCCTGGCTTGTGGCCGGGC	chr6:3595331	-	70	0	0	0	0	0	1
+rs1967688	2	TTCAGGCACAGCCCGGCCACAAGC	chr6:3595321	+	75	0	0	0	0	0	1
+rs1967688	3	TTCCTCTTTCTATCCTGGCTTGTG	chr6:3595338	-	45	0	0	0	0	1	16
+rs1980493	1	TTCACTGCAACCTTGAACACCTGG	chr6:3618475	+	55	0	0	1	54	93	>=12
+rs1980493	2	TTCAAGGTTGCAGTGAACTGTGAT	chr6:3618468	-	45	1	0	21	302	161	>=0
+rs3806157	1	TTCCCACACACGTCTCATTTCCAA	chr6:3629046	+	45	0	0	0	0	0	6
+rs3806157	2	TTCCAAGCACCAGCAGCAGACAGT	chr6:3629064	+	55	0	0	0	0	1	5
+rs9268544	1	TTCCTCCAAGATCAGTAACAAGAC	chr6:3640712	+	40	0	0	0	12	139	>=242
+rs9268840	1	TTCTTGGCTGTGATTTTTAAAGGC	chr6:3684097	+	40	0	0	0	0	0	17
+rs482044	1	TTCTTGCCAAGGTACTATGAAGCC	chr6:3807636	-	50	1	0	0	0	0	1
+rs149839148	1	TTCCTCCCCTGGCTGCTTTCCTCT	chr6:3813315	+	60	0	0	0	0	0	32
+rs9275111	1	TTCAGGGCTAAAGTCTTCTTTTCC	chr6:3876244	+	45	0	0	0	0	0	4
+rs2858331	1	TTCCAGGCTATAGGTAAATTTAAA	chr6:3907736	-	25	0	0	180	121	7	>=0
+rs3957148	1	TTCATAGAGAGAAGCGCACACATC	chr6:3908603	-	50	0	0	0	0	1	4
+rs9275614	1	TTCAGAGAAATCAGCTTGTTCACA	chr6:3910721	-	40	0	0	0	0	0	4
+rs9268840	1	TTCCCATAGACACTGATGTAGTAG	chr6:3776298	-	40	0	0	0	0	0	7
+rs482044	1	TTCCTACATTAAAGCTTAGGGTTT	chr6:4010375	-	30	1	0	0	0	0	6
+rs149839148	1	TTCAGTCTCTATCTTGGTAAGTAG	chr6:4016007	+	40	0	0	0	0	0	7
+rs9275111	1	TTCAGAACTCAAACTGATTCCTGA	chr6:4081904	+	40	0	0	0	0	0	7
+rs9275111	2	TTCTGTTATTTCAGAACTCAAACT	chr6:4081895	+	30	0	0	0	0	1	12
+rs2858331	1	TTCCTAAACAGTCTCACTGCAGCT	chr6:4113615	+	45	1	0	0	0	0	7
+rs2858331	2	TTCATTTCCTAAACAGTCTCACTG	chr6:4113610	+	40	1	0	0	0	0	10
+rs1987580	1	TTCAAAAAATTAGCCAAGCATGGT	chr7:99972959	+	35	0	0	0	85	12	>=0
+rs3735242	1	TTCAAGGACAAGAGTGAGCCCATC	chr7:100174227	+	55	0	0	0	0	0	1
+rs11767557	1	TTCCCTATAGAGATGCCCTAAGAC	chr7:143412046	+	45	0	0	0	0	0	2
+rs11767557	2	TTCGATGCTGGGCAGTATTCCCTA	chr7:143412029	+	50	0	0	0	0	1	2
+rs620490	1	TTCTTGGTTGGGGATTGAGTGGGC	chr8:16840063	+	60	0	0	0	0	0	4
+rs620490	2	TTCAATTCTTGGTTGGGGATTGAG	chr8:16840058	+	45	0	0	0	0	0	5
+rs620490	3	TTCTGCCCACTCAATCCCCAACCA	chr8:16840067	-	60	0	0	0	0	0	7
+rs755951	1	TTCACTGGCATGTAGGGGGACCTG	chr8:27369264	+	65	0	0	0	0	0	2
+rs2565048	1	TTCTATAGATTTGCCTATTCTGCA	chr8:27472592	-	35	0	0	0	22	132	>=16
+rs2565048	2	TTCTGTTTCTATAGATTTGCCTAT	chr8:27472598	-	30	0	0	14	238	78	>=3
+rs7831810	1	TTCGAGGACAGGAGCATTCCACGG	chr8:27572977	+	60	0	0	0	0	1	0
+rs9331950	1	TTCTAAGCTATAAATTTACATGTG	chr8:27597159	+	25	0	0	0	0	0	18
+rs78752429	1	TTCTCTTGCTGCTGCCGTATAAGA	chr9:27466675	-	50	0	0	0	18	234	>=45
+rs78752429	2	TTCTTATACGGCAGCAGCAAGAGA	chr9:27466674	+	50	0	0	0	20	268	>=25
+rs12552327	1	TTCAGAAGTTCTTCCTGCTGTACA	chr9:27469551	-	45	1	0	0	0	0	8
+rs12552327	2	TTCTGAACATCAGTTAATTCAATA	chr9:27469568	+	25	0	0	0	0	1	8
+rs4879515	1	TTCCCGTCCTTTAATGTTAGGTCT	chr9:27482219	-	40	0	0	0	0	1	0
+rs147599399	1	TTCCCAGATATTTGTTATTGGTTA	chr9:27543624	+	25	0	0	0	0	0	12
+rs17696570	1	TTCTAAAATCATTTTTGAGACTCT	chr9:27558433	-	25	0	0	0	1	2	32
+rs10812619	1	TTCAAGCTAAGTATTTTAAAAGTT	chr9:27569179	+	20	0	0	0	0	2	32
+rs11795154	1	TTCACAATAGCAAAGACTTGGAAC	chr9:27577614	+	40	0	0	612	5	0	>=0
+rs11795154	2	TTCCAAGTCTTTGCTATTGTGAAT	chr9:27577613	-	30	0	0	619	18	0	>=0
+rs7854467	1	TTCTGAAACTATTGAGATGATCAT	chr9:27593166	-	30	0	0	2	45	330	>=2

data/ChopChop/ChopChop_Nickase_NGG.csv

@@ -0,0 +1,301 @@
+snp_id	Rank	Target sequence	Genomic location	Cluster	Off-target pairs	Off-targets MM0	Off-targets MM1	Off-targets MM2	Off-targets MM3	Restriction sites	Best ID
+rs147288664	1	AGACTCATGCTGACCATAGCTGG*AAGACTGACGTGAGCTGGAG*CCATGTTGGCCAGAGCTTGATGC	chr1:152220414	1	0	1/0	8/0	4/1	12/16	BmgBI:10	1
+rs12726330	1	GAAGGGGACTGACCGGGACATGG*AAGAGGTCTGGA*CCAGGGTACTGGGAAGGCGCTCG	chr1:155135653	1	0	0/0	0/0	0/0	12/10	Hpy188III:9	1
+rs12726330	2	CCGCGGAGCCCTAGGAAGGGGAC*TGACCGGGACATGGAAGAGGTCTGGACCAG*GGTACTGGGAAGGCGCTCGGAGG	chr1:155135639	2	0	0/0	0/0	3/1	11/9	ScrFI:6;AvaII:25;MboII:27;BslI:11;NciI:6;StyD4I:4;EarI:10;BsmFI:21;Hpy188III:23;Sau96I:25	2
+rs12726330	3	CCAGGGTACTGGGAAGGCGCTCG*GAGGAGAGGGG*CGCGAGTTCCGGTTCGGCGTCGG	chr1:155135688	3	0	0/0	0/1	0/130	10/>=164		5
+rs75548401	1	TGAGGTCTGCTTTGCAGGAAGGG*AGACTGGGGTGGCTTA*CCGTGATGATGCTGTGGCTGTAC	chr1:155236205	1	1	1/1	2/0	1/1	18/14	BsrI:9;BmrI:14	1
+rs75548401	2	GGCTTACCGTGATGATGCTGTGG*CTGTACTGCAT*CCCTCGATCCCAGGAGCCTAGCC	chr1:155236238	2	3	1/4	2/0	0/0	4/7		2
+rs71630614	1	GCAGACACCCAGGCAGGGCAAGG*GCACCCAGGTTTCAGTCCTGGTTCTGTCA*CCTCTGGTTAGGAGCTGTGAGCA	chr1:156102374	1	0	0/0	1/0	6/2	66/12	BsaJI:5;StyD4I:5,17;BstNI:7,19;ScrFI:7,19;PspGI:5,17	1
+rs188789342	1	AGTACTGTTTCCTGAACAGGTGG*CGGGCGCCTGTAATC*CCAGCTACTCAGGAGGCTGAGGC	chr10:119612793	1	0	0/1164	0/36	0/0	11/>=0	SfoI:6;NlaIV:6;PluTI:8;BanI:4;HaeII:8;BsaHI:5;KasI:4;NarI:5	1
+rs202122669	1	GAATAGATGTTGCCGATAAATGG*CAGCCCCGGCGGCC*CCGGGGGGAAGCCCATCGGCCGC	chr11:14892045	2	0	0/0	0/0	2/0	5/2	NciI:7;StyD4I:5;ScrFI:7;MwoI:10;BsaJI:5;BglI:10;Fnu4HI:11	1
+rs202122669	2	GAATAGATGTTGCCGATAAATGG*CAGCCCCGGCGGC*CCCGGGGGGAAGCCCATCGGCCG	chr11:14892045	1	0	0/0	0/0	2/0	5/5	NciI:7;StyD4I:5;ScrFI:7;MwoI:10;BsaJI:5;BglI:10;Fnu4HI:11	2
+rs55777218	1	CCTGGCAGGGCGCAGTGGCTCAC*GCCTGTAATCCCAGCACTTTGGGAAGA*CCTCAGGTGACCCACCCACCTCA	chr11:60303423	1	0	22/123	574/276	226/233	>=0/>=0	BseYI:11;BstXI:19	1
+rs4944549	1	CCTTGTATTGGGCTCTGCCCCGC*CAAGTGCCTTCGGCTCCCTGGC*CGCTCTCCTCACTCCATATGTGG	chr11:85941188	1	0	0/0	0/0	0/1	5/9	BsaJI:17;NlaIV:15;PspGI:17;HpyAV:18;StyD4I:17;BstNI:19;ScrFI:19	1
+rs67598967	1	CCTCCCAAAGTGCTGGGATTACA*GGAGTGAGCCACCGTGCCCGGCCGGGCC*TGGTCATTCTTAAGAATCTGGGG	chr11:86132113	1	0	1200/0	0/0	0/1	>=0/20	EaeI:20;HpyCH4III:14;StyD4I:17,22;NciI:19,24;ScrFI:19,24;EagI:20;Sau96I:25;BaeGI:19;BsiEI:23;Bsp1286I:19	1
+rs67598967	2	CCCACCTCAGCCTCCCAAAGTGC*TGGGATTACAGGA*CCCGGCCGGGCACGGTGGCTCAC	chr11:86132103	2	1	984/437	2/182	0/0	>=0/>=0		3
+rs67598967	3	CCACCTCAGCCTCCCAAAGTGCT*GGGATTACAGGA*CCCGGCCGGGCACGGTGGCTCAC	chr11:86132104	3	1	1200/437	0/182	0/0	>=0/>=0		5
+rs11223616	1	GTTCTACCACCAGCGTGAGGAGG*GCTGGGCACTCGCCCCTC*CCATGGCTTATATGAAAACCCCA	chr11:133902892	3	0	0/0	0/0	0/0	4/5	Bsp1286I:9;BseYI:2;BaeGI:9	1
+rs11223616	2	TGGGTTCTACCACCAGCGTGAGG*AGGGCTGGGCACTCGCCCCTC*CCATGGCTTATATGAAAACCCCA	chr11:133902889	2	0	0/0	0/0	0/0	6/5	Bsp1286I:12;BseYI:5;BaeGI:12	2
+rs11223616	3	TGGGTTCTACCACCAGCGTGAGG*AGGGCTGGGCACTCGCC*CCTCCCATGGCTTATATGAAAAC	chr11:133902889	1	0	0/0	0/0	0/0	6/12	Bsp1286I:12;BseYI:5;BaeGI:12	4
+rs10444323	1	AGCCCTGTAATTAATAGTGCAGG*TTAGAAATAGGCTGC*CCTCTCCTCCATGTAATTCACCA	chr11:133941224	1	0	0/0	0/0	0/1	7/16	Fnu4HI:13;ApeKI:12;TseI:12	1
+rs1491942	1	CCTGGGTAGGCGTTTTGGTCTGC*AGGGTCTAGATAAGGCA*GTGCTATACTTGACAACCCAGGG	chr12:40226953	1	0	0/0	0/0	0/0	2/4	Hpy188III:7;XbaI:6	1
+rs1491942	2	CCTGGGTAGGCGTTTTGGTCTGC*AGGGTCTAGATAAGGCAG*TGCTATACTTGACAACCCAGGGG	chr12:40226953	2	0	0/0	0/0	0/0	2/10	Hpy188III:7;XbaI:6	3
+rs1491942	3	GGGTAGGCGTTTTGGTCTGCAGG*GTCTAGATAAGGCAGTGCTATACTTGACAA*CCCAGGGGAGCCTGGAACATACT	chr12:40226956	3	0	0/0	0/0	0/0	5/19	TspRI:20;BtsI:20;Hpy188III:4;BtsIMutI:20;XbaI:3	4
+rs113247976	1	GCAAACTCCTGTACCAGCAGTGG*AGCCACATCTTCTGGCGGC*CCCTTGGCTTCCTACCAGAAGGC	chr12:57581874	1	0	0/0	0/0	0/0	17/10	Fnu4HI:17	1
+rs73124200	1	CCATAGAAAGCCTCTACCGGCCG*GGCACGGTGGCTCA*CCAAAGTCCTGGGATTACAGGCG	chr12:64555450	1	0	0/337	0/9	0/0	2/>=0	HpyCH4III:7	1
+rs73124200	2	CCATAGAAAGCCTCTACCGGCCG*GGCACGGTGGCTCACGCC*CCTCCCAAAGTCCTGGGATTACA	chr12:64555450	2	0	0/350	0/263	0/0	2/>=0	HpyCH4III:7	3
+rs147767029	1	TGTCCGAGCCTGGCTGGGCTGGG*CGCGCTGGCTCCCT*CCTTCGCCGCCCGCAGAGCTGCC	chr14:52951113	2	0	0/0	0/0	0/1	25/16	Cac8I:7;NlaIV:10	1
+rs147767029	2	CCCTCGCCTGGCTCCCCGCGCTC*CACCCTCTCCCCGCCCCCTC*TGTCCGAGCCTGGCTGGGCTGGG	chr14:52951070	1	0	0/0	0/0	0/0	24/25	FauI:19	2
+rs117618017	1	CCTTTATGTCTTCACCATCGCCA*CCGAGCCGTTG*CGTATCATCTTCCTCATCGCCGG	chr15:63277680	2	0	0/0	0/0	0/0	8/2		1
+rs117618017	2	CCCTTTATGTCTTCACCATCGCC*ACCGAGCCGTTG*CGTATCATCTTCCTCATCGCCGG	chr15:63277679	1	0	0/0	0/0	1/0	11/2		2
+rs11862962	1	CCAGATGGTCCCGAACTCCTGAC*TTCAAGTGATCCGCC*CGCCTCATCCTCCCAAAGTGTGG	chr16:30898360	1	0	0/0	23/154	227/148	>=4/>=0	AlwI:3	1
+rs8050588	1	GCCCAGCACACAGTAGGGATCGG*GGAAGCATGGGTTTCCGC*CCTGCCTTCCTCATCCTTTGAGC	chr16:30926457	1	0	0/0	0/0	6/2	33/36		1
+rs28725459	1	CCTGACCAATATGGCGAAACCTC*CTGGTCTCGAACTCCTGA*CCTCAGGTGATCTGCCCACCTCG	chr16:31121310	2	0	5/352	309/27	92/0	>=0/>=0	Hpy188III:7,15;BcoDI:10;BsaI:10;BsmAI:10	1
+rs28725459	2	CCAATATGGCGAAACCTCGTCTC*TCAGGCTGGTCTCGAACTCCTGA*CCTCAGGTGATCTGCCCACCTCG	chr16:31121305	1	0	27/352	297/27	111/0	>=0/>=0	Hpy188III:12,20;BcoDI:15;BsaI:15;BsmAI:15	2
+rs9898399	1	CCATTTTAAACAGTGAAATTGGC*CAGGCATGGTGGCTCACAGCTGTAATCC*CCACCTCGGCCTCACAAAGTGCT	chr17:45872932	1	2	2/436	2/468	13/0	71/>=0	PvuII:20;MspA1I:20	1
+rs61572747	1	CCAAAGGTTTTATCAATCATGCT*TGCATAATAAAGCCTCCATAAACACCCTGAA*CCCTGAAAGCTCTGCAAACCCCT	chr17:73989	1	21	14/13	9/7	24/2	>=369/14		1
+rs3935637	1	CCCACCTCAGCCTCCCAAAGTGC*AGGATCAGCTTGA*CCCCAGGAGGCCGAGATTGCACA	chr17:936954	5	0	984/0	74/0	0/0	>=0/43	AlwI:11	1
+rs3935637	2	CCAAAGTGCTGGGATTACAGGCG*GAGGCTGAGGTGGGAGGATCAGCTTGA*CCCCAGGAGGCCGAGATTGCACA	chr17:936940	1	0	1200/0	0/0	0/0	>=0/43	BbvCI:6;AlwI:25;Bpu10I:6;DdeI:6	3
+rs3935637	3	CCCAAAGTGCTGGGATTACAGGC*AGGCTGAGGTGGGAGGATCAGCTTGA*CCCCAGGAGGCCGAGATTGCACA	chr17:936941	2	0	1200/0	0/0	0/0	>=0/43	BbvCI:5;AlwI:24;Bpu10I:5;DdeI:5	4
+rs3935637	4	CCTCCCAAAGTGCTGGGATTACA*CTGAGGTGGGAGGATCAGCTTGA*CCCCAGGAGGCCGAGATTGCACA	chr17:936944	3	0	1200/0	0/0	0/0	>=0/43	AlwI:21;DdeI:2	5
+rs3935637	5	CCACCTCAGCCTCCCAAAGTGCT*GAGGATCAGCTTGA*CCCCAGGAGGCCGAGATTGCACA	chr17:936953	4	0	1200/0	0/0	0/0	>=0/43	AlwI:12	6
+rs34186148	1	CGAGGTCAGGCAGCCTTAGCTGG*GCCAGCAGCCCCGTTCCA*CCCCCGACCCATCCTGACACAGC	chr17:1010879	2	2	2/2	0/0	0/1	9/14	TseI:6;Fnu4HI:7;Cac8I:4;ApeKI:6;BbvI:18	1
+rs34186148	2	GAGGTCAGGCAGCCTTAGCTGGG*CCAGCAGCCCCGTTCCA*CCCCCGACCCATCCTGACACAGC	chr17:1010880	6	2	2/2	0/0	0/1	11/14	TseI:5;Fnu4HI:6;ApeKI:5;BbvI:17	2
+rs34186148	3	CGAGGTCAGGCAGCCTTAGCTGG*GCCAGCAGCCCCGTTCCAC*CCCCGACCCATCCTGACACAGCC	chr17:1010879	3	2	2/2	0/0	0/2	9/16	TseI:6;Fnu4HI:7;Cac8I:4;ApeKI:6;BbvI:18	3
+rs34186148	4	GAGGTCAGGCAGCCTTAGCTGGG*CCAGCAGCCCCGTTCCAC*CCCCGACCCATCCTGACACAGCC	chr17:1010880	7	2	2/2	0/0	0/2	11/16	TseI:5;Fnu4HI:6;ApeKI:5;BbvI:17	4
+rs34186148	5	CGAGGTCAGGCAGCCTTAGCTGG*GCCAGCAGCCCCGTTCCACCCCCGA*CCCATCCTGACACAGCCCCCACC	chr17:1010879	4	2	2/2	0/0	0/4	9/50	TseI:6;Fnu4HI:7;Cac8I:4;ApeKI:6;BbvI:18	9
+rs34186148	6	GAGGTCAGGCAGCCTTAGCTGGG*CCAGCAGCCCCGTTCCACCCCCGA*CCCATCCTGACACAGCCCCCACC	chr17:1010880	8	2	2/2	0/0	0/4	11/50	TseI:5;Fnu4HI:6;ApeKI:5;BbvI:17	10
+rs34186148	7	CGAGGTCAGGCAGCCTTAGCTGG*GCCAGCAGCCCCGTTCCACCCCCGACCCAT*CCTGACACAGCCCCCACCCACTC	chr17:1010879	5	2	2/2	0/0	0/5	9/61	TseI:6;Fnu4HI:7;Cac8I:4;ApeKI:6;BbvI:18	13
+rs34186148	8	GAGGTCAGGCAGCCTTAGCTGGG*CCAGCAGCCCCGTTCCACCCCCGACCCAT*CCTGACACAGCCCCCACCCACTC	chr17:1010880	9	2	2/2	0/0	0/5	11/61	TseI:5;Fnu4HI:6;ApeKI:5;BbvI:17	14
+rs34186148	9	CCTTAGCTGGGCCAGCAGCCCCG*TTCCACCCCCGACCCATCCTGACACA*GCCCCCACCCACTCCAGCTCTGG	chr17:1010892	1	2	2/2	0/1	1/5	28/58	BtsCI:15;Hpy188III:19;FokI:2;BccI:23	15
+rs61572747	1	CCAAAGGTTTTATCAATCATGCT*TGCATAATAAAGCCTCCATAAACACCCTGAA*CCCTGAAAGCTCTGCAAACCCCT	chr17:73989	1	21	14/13	9/7	24/2	>=369/14		1
+rs9898399	1	CCACTGGGCAAGAGCAAGGGCAC*TACTGGGTCTTTGCAAGGCAAATGACGGCAA*GGCAACTTGCCTTTGGTGGTGGG	chr17:575049	3	0	0/0	0/0	1/0	15/5	BmrI:13;BsrI:8	1
+rs9898399	2	CCCACTGGGCAAGAGCAAGGGCA*CTACTGGGTCTTTGCAAGGCAAATGACGGCA*AGGCAACTTGCCTTTGGTGGTGG	chr17:575048	1	0	0/0	0/0	1/0	13/9	BmrI:14;BsrI:9	2
+rs9898399	3	CCACTGGGCAAGAGCAAGGGCAC*TACTGGGTCTTTGCAAGGCAAATGACGGCA*AGGCAACTTGCCTTTGGTGGTGG	chr17:575049	2	0	0/0	0/0	1/0	15/9	BmrI:13;BsrI:8	3
+rs916888	1	GCACAGAAGATTGCGAGCCGAGG*TGCAGCCCAGCTCCTCC*CCGCCTCGCCCCTCAGGGTTGGC	chr17:1305145	1	1	1/1	0/0	0/1	4/20	BseYI:7;TseI:3;Fnu4HI:4;ApeKI:3;BseRI:3;BbvI:15	1
+rs1141534	1	TGGGAACATGACGCAGGTGCAGG*TGTCTCTTCTCG*CCCTGGCGGGGAAGGTGAGGCCC	chr19:1032648	1	0	0/0	2/0	5/5	17/39	EarI:11;BsmAI:8;BcoDI:8	1
+rs1141534	2	GGTGTCTCTTCTCGCCCTGGCGG*GGAAGGTGAGG*CCCAGAGAGGGGCAGCCACCTGC	chr19:1032669	3	0	0/0	2/0	2/14	13/90		3
+rs1141534	3	CCAGGGCGAGAAGAGACACCTGC*CGGGGAAGGTGAGG*CCCAGAGAGGGGCAGCCACCTGC	chr19:1032666	2	0	6/0	7/0	2/14	7/90		5
+rs1141534	4	CCCGCCAGGGCGAGAAGAGACAC*GAAGGTGAGGC*CCAGAGAGGGGCAGCCACCTGCC	chr19:1032670	4	0	8/0	2/0	4/19	44/91		7
+rs3764645	1	GCCCTTGCACAGCTTGTTGGAGG*CCGCTGAGGACCTGG*CCCAGGAGGTACGAGGCCCCACT	chr19:1042781	3	0	0/0	0/0	0/0	8/3	BstNI:13;MspA1I:4;ScrFI:13;DdeI:5;PpuMI:9;PspGI:11;Bpu10I:5;StyD4I:11;EcoO109I:9;Sau96I:9;BbvCI:5;AvaII:9	1
+rs3764645	2	GGAGCCCTTGCACAGCTTGTTGG*AGGCCGCTGAGGACCTGG*CCCAGGAGGTACGAGGCCCCACT	chr19:1042778	2	0	0/0	0/0	0/0	11/3	BstNI:16;MspA1I:7;ScrFI:16;DdeI:8;PpuMI:12;PspGI:14;Bpu10I:8;StyD4I:14;EcoO109I:12;Sau96I:12;Fnu4HI:5;BbvCI:8;AvaII:12	2
+rs3764645	3	CCAAGCCCAGGAGCCCTTGCACA*GCTTGTTGGAGGCCGCTGAG*GACCTGGCCCAGGAGGTACGAGG	chr19:1042769	1	0	0/0	0/0	1/2	32/10	MspA1I:16;BspCNI:9;Fnu4HI:14;DdeI:17	4
+rs80257887	1	GGGAACACAGCAGGAAGTACAGG*TTCTACATTTCCCTGA*CCACTAGGGGTTGGGATTCAACA	chr19:44516747	1	0	0/0	0/0	1/0	28/5		1
+rs75161053	1	CGCTGACCTGCATTACACCCAGG*GTGATCTCCCACACAGCTGAGTTGTA*CCCTCTGTAGCTCCTACGAATCA	chr19:44544842	1	0	0/0	0/0	1/0	3/8	DdeI:18;BspCNI:10;PvuII:17;MspA1I:17	1
+rs111780744	1	CCACGTGGGATGGAACCAGAGGC*ATGGAAGCAAGACGCTAAA*TGAAGAGGGCCATAAGGGCTGGG	chr19:44663649	1	0	0/0	0/0	1/0	12/9		1
+rs2289495	1	CCTGTGGCCCCACACACCAGTCC*CAGCAAGGTGACCACGGCTGCTG*GACCCCTTCCCTGTTCAGGCAGG	chr19:44683986	2	0	0/0	0/0	1/0	36/15	HphI:20;BstEII:8;BsaJI:13;Tsp45I:8;ApeKI:18;BbvI:5;TseI:18;Fnu4HI:19;BtgI:13	1
+rs2289495	2	CCTGTGGCCCCACACACCAGTCC*CAGCAAGGTGACCACGGCT*GCTGGACCCCTTCCCTGTTCAGG	chr19:44683986	1	0	0/0	0/0	1/4	36/13	BstEII:8;BsaJI:13;Tsp45I:8;BtgI:13	2
+rs2289495	3	AGCAAGGTGACCACGGCTGCTGG*ACCCCTTCCCTGTTCAGGCAGGCCCAGC*CCCTCTCAGAACCTGCTGCCAGC	chr19:44684010	3	0	0/0	0/0	3/2	15/40	BseYI:24;MwoI:25;Sau96I:22;Cac8I:21;BslI:15;HpyAV:15	3
+rs2965163	1	TGCCCCCAGTACGTGCTCTGAGG*CAGGCCCGGCACGGAACACT*CCATGTGCCTATTTTGATCCTCA	chr19:44697226	1	0	0/0	0/0	0/0	7/19	Sau96I:4;NciI:7;ScrFI:7;StyD4I:5	1
+rs4600571	1	CGAGGTGGGCTGATCATCTGAGG*TCAGGAGTTCGAGACCAG*CCTGGCCAATATGGTGAAGCCCC	chr19:44714193	1	0	2/90	305/400	147/410	>=0/>=0	BcoDI:6;BsmAI:6;Hpy188III:3,11;BsaI:6	1
+rs111740474	1	GTTTGTATTTGTGTAGAGATGGG*GTTTCACCATGTTGG*CCAGGCTGGTCTTGAACTCTATC	chr19:44720215	1	0	0/0	24/29	393/298	>=68/>=128		1
+rs2965109	1	GGGGCAGAATTGTAAAGCGAGGG*ACAAGAAGAGTCAGGGGTCT*CCAAGCTTTGAGCCTGAGCCACT	chr19:44722047	1	0	0/0	0/0	0/4	4/17	MlyI:18;PleI:17;MboII:18;HinfI:9	1
+rs150820726	1	CCAAGAGACTCCCCCAGCTGCCA*CATGCAGGGTGAATGGAAT*GATGCACAGAATCCAGTTTCAGG	chr19:44723867	1	0	0/0	0/0	1/1	37/15		1
+rs10401176	1	CCTATTCCAAGAGTGAGAAAGCA*GGCCTCAGTTTTCCCC*GTCTGTGTGATGGGTTGGTATGG	chr19:44750196	1	0	0/0	0/0	11/0	138/23	DdeI:5	1
+rs8103315	1	CCACACCCTGCACCCAGCAATTC*ATCAGCCACAAAATCACTCTGCAGAC*AGTCCCTGGGGTCCCCTGCTAGG	chr19:44750858	1	0	0/0	0/1	0/1	54/29	SfcI:20;PstI:24	1
+rs140414737	1	AGAAACTCCGTTCCCAAGGGAGG*TGGTAACTCTGTGCTCAGAGCGC*CCTCTTGTGGCTATCCTCAGGTC	chr19:44770801	1	0	0/0	0/0	1/0	12/8	BsiHKAI:16;MwoI:20;Bsp1286I:16;DdeI:15;Hpy188I:18	1
+rs140414737	2	CCGTTCCCAAGGGAGGTGGTAAC*TCTGTGCTCAGAGC*GCCCTCTTGTGGCTATCCTCAGG	chr19:44770808	2	0	0/0	0/0	0/1	17/12	BsiHKAI:9;DdeI:8;Bsp1286I:9;Hpy188I:11	2
+rs10419669	1	CCAGATGTGTCCTACCTCGGGGC*CTTTGCATAAGCTGTTCCCTT*GGCCTGCACAGTCTTTCCTGAGG	chr19:44794794	1	0	0/0	0/0	0/8	6/21		1
+rs2965112	1	CCAGCACTTTGGGAGGCTGAGGC*AGGAGGATGGTTTAAGCCCAGGAG*CCATAGCTCACTGCAGCCTTGAC	chr19:44799220	1	0	1062/38	42/104	0/14	>=0/>=0	BsaJI:18;ScrFI:20;BstNI:20;PspGI:18;BtsCI:12;FokI:19;StyD4I:18	1
+rs140824606	1	CCTCAACCGCCTGGGCTCAAGCA*TTTGAATGAGCTATGATTGCG*CCCACTGCATTCCCGGCTGGGCA	chr19:44807784	1	0	6/0	347/1	4/90	>=0/>=117	MwoI:17	1
+rs1135062	1	GTGAAGCCTCCAACCCCCACGGG*AACAAGCGCCATGTCTT*CCACTTCGGCACCGGTGAGTGAC	chr19:44819437	10	0	0/0	0/0	1/0	15/1	HaeII:10	1
+rs1135062	2	TGTGAAGCCTCCAACCCCCACGG*GAACAAGCGCCATGTCTT*CCACTTCGGCACCGGTGAGTGAC	chr19:44819436	7	0	0/0	0/0	2/0	14/1	HaeII:11	2
+rs1135062	3	CCAACCCCCACGGGAACAAGCGC*CATGTCTTCCACTTCG*GCACCGGTGAGTGACTGAGGTGG	chr19:44819446	1	0	0/0	0/0	1/0	9/12		3
+rs1135062	4	CCATGTCTTCCACTTCGGCACCG*GTGAGTGACTGAGGTG*GTGGCAGAGGAGCCGGGTGTGGG	chr19:44819468	8	0	0/0	0/1	0/0	5/26	Tsp45I:5;BspCNI:2;DdeI:10	5
+rs1135062	5	CCATGTCTTCCACTTCGGCACCG*GTGAGTGACTGAGGTGG*TGGCAGAGGAGCCGGGTGTGGGG	chr19:44819468	9	0	0/0	0/0	0/2	5/36	Tsp45I:5;BspCNI:2;DdeI:10	7
+rs1135062	6	CCCACGGGAACAAGCGCCATGTC*TTCCACTTCGGCACCGGTGAGTGACTGAGGT*GGTGGCAGAGGAGCCGGGTGTGG	chr19:44819452	4	0	0/0	0/0	0/3	2/73	HphI:29;NlaIV:13;BspCNI:18;Tsp45I:21;AgeI:14;BsrFI:14;BanI:11;DdeI:26;BsaWI:14;SgrAI:14	8
+rs1135062	7	CCACGGGAACAAGCGCCATGTCT*TCCACTTCGGCACCGGTGAGTGACTGAGGT*GGTGGCAGAGGAGCCGGGTGTGG	chr19:44819453	6	0	0/0	0/0	0/3	4/73	HphI:28;NlaIV:12;BspCNI:17;Tsp45I:20;AgeI:13;BsrFI:13;BanI:10;DdeI:25;BsaWI:13;SgrAI:13	9
+rs1135062	8	CCCACGGGAACAAGCGCCATGTC*TTCCACTTCGGCACCGGTG*AGTGACTGAGGTGGTGGCAGAGG	chr19:44819452	3	0	0/0	0/0	0/3	2/98	NlaIV:13;AgeI:14;BsaWI:14;BsrFI:14;BanI:11;SgrAI:14	11
+rs1135062	9	CCACGGGAACAAGCGCCATGTCT*TCCACTTCGGCACCGGTG*AGTGACTGAGGTGGTGGCAGAGG	chr19:44819453	5	0	0/0	0/0	0/3	4/98	NlaIV:12;AgeI:13;BsaWI:13;BsrFI:13;BanI:10;SgrAI:13	12
+rs1135062	10	CCAACCCCCACGGGAACAAGCGC*CATGTCTTCCACTTCGGCACCGGTG*AGTGACTGAGGTGGTGGCAGAGG	chr19:44819446	2	0	0/0	0/0	1/3	9/98	NlaIV:19;AgeI:20;BsaWI:20;BsrFI:20;BanI:17;SgrAI:20	13
+rs28399637	1	GGGCAGTGGAGCACGCCCGTGGG*CACAGGCTGACCTCTCCATCCGCTC*CCCAGTGCTGAGCCAAGAACCTC	chr19:44820863	5	0	0/0	0/1	0/0	9/17	BsrBI:23;FokI:4;BccI:25;BtsCI:17	1
+rs28399637	2	TGGAGCACGCCCGTGGGCACAGG*CTGACCTCTCCATCCGCTC*CCCAGTGCTGAGCCAAGAACCTC	chr19:44820869	6	0	0/0	0/1	0/0	9/17	BsrBI:17;BtsCI:11;BccI:19	2
+rs28399637	3	TGGGCAGTGGAGCACGCCCGTGG*GCACAGGCTGACCTCTCCATCCGCTC*CCCAGTGCTGAGCCAAGAACCTC	chr19:44820862	3	0	0/0	0/1	3/0	9/17	BsrBI:24;FokI:5;BccI:26;BtsCI:18	3
+rs28399637	4	GGGCAGTGGAGCACGCCCGTGGG*CACAGGCTGACCTCT*CCATCCGCTCCCCAGTGCTGAGC	chr19:44820863	4	0	0/0	0/0	0/2	9/31		4
+rs28399637	5	TGGGCAGTGGAGCACGCCCGTGG*GCACAGGCTGACCTCT*CCATCCGCTCCCCAGTGCTGAGC	chr19:44820862	2	0	0/0	0/0	3/2	9/31		7
+rs28399637	6	GGCCTGGGCCCCCTGGTGAGAGG*GACCTGCTGGGCAGTGGAGCACG*CCCGTGGGCACAGGCTGACCTCT	chr19:44820832	7	0	0/0	0/0	2/5	41/21	Bsp1286I:22;BfuAI:12;TspRI:19;BtsI:19;BspMI:12;BseYI:7;BtsIMutI:19;BsiHKAI:22	10
+rs28399637	7	GAGAGGGACCTGCTGGGCAGTGG*AGCACGCCCGTGGGCACAGGCTGACCTCT*CCATCCGCTCCCCAGTGCTGAGC	chr19:44820849	1	0	0/0	0/0	9/2	70/31	BtgI:9;Bsp1286I:17;Cac8I:5;BsaJI:9;BaeGI:17;AleI:8;MslI:8	12
+rs56394238	1	TGAAACAAGGTTTCTTTTTTGGG*GGGATGGGGGGATGGAGTCTCGCTCTGTCG*CCCAGGCTGGAGTGCAGCGGTAC	chr19:44832393	1	0	0/74	0/579	2/170	49/>=0	BsmAI:23;MlyI:25;BtsCI:9,17;FokI:16,24;BcoDI:23;PleI:24;HinfI:16;BccI:6	1
+rs56394238	2	GGTTTCTTTTTTGGGGGGATGGG*GGGATGGAGTCTCGCTCTGTCG*CCCAGGCTGGAGTGCAGCGGTAC	chr19:44832401	2	0	0/74	1/579	15/170	110/>=0	BsmAI:15;MlyI:17;BtsCI:9;FokI:16;BcoDI:15;PleI:16;HinfI:8	3
+rs56394238	3	GTTTCTTTTTTGGGGGGATGGGG*GGATGGAGTCTCGCTCTGTCG*CCCAGGCTGGAGTGCAGCGGTAC	chr19:44832402	3	0	0/74	9/579	24/170	>=291/>=0	BsmAI:14;MlyI:16;BtsCI:8;FokI:15;BcoDI:14;PleI:15;HinfI:7	5
+rs55840414	1	CCAGCCTGGTAATATTGTGAAAC*CCCGTCTCTAATAAAACT*GCGAACATAGCCAGGCGTCGTGG	chr19:44840279	1	0	0/0	2/0	52/0	>=249/20	Esp3I:10;BcoDI:10;BsmBI:10;BsmAI:10	1
+rs111371860	1	CCTCCCAGGTTCATGCCATTCTC*CGGAGCTTGCACTGAG*CCAAGATCGCGCCACTGCACTCC	chr19:44842488	1	0	396/1145	25/55	0/0	>=0/>=0	BtsIMutI:10;Cac8I:8;DdeI:13;BspCNI:5	1
+rs7255063	1	CCAATAGAGGGAAGCGGTCAGAC*ACAGATTTAGGAATGGG*GTCAGAGACACGTGTAGGAATGG	chr19:44849109	1	0	0/0	0/0	0/0	4/6		1
+rs10421035	1	CCTGGCTAACACGGTGAAACCAC*ATGGTCTCAATCTCCTGA*CCTCGTGATCTGCCTGCCTTGGC	chr19:44853386	1	0	176/326	469/29	2/0	>=0/>=0	Hpy188III:15;BsmAI:10;BsaI:10;BcoDI:10	1
+rs10421035	2	CCTGGCTAACACGGTGAAACCAC*ATGGTCTCAATCTCCTGACCTCGTGATCTG*CCTGCCTTGGCCTCCCAAAGTGC	chr19:44853386	2	0	176/1200	469/0	2/0	>=0/>=0	Hpy188III:15,23;BssSI:21;BsmAI:10;BsaI:10;BcoDI:10	3
+rs35396326	1	CCTGACCTCGTGATCCGCCCTCC*TCGGCCTCCCAAAGTGTTGGAATTAC*CCTGGGCGCAATGGCTCACGCCT	chr19:44853714	1	0	313/2	0/146	0/88	>=0/>=0	BstXI:17	1
+rs12978931	1	CCCCCCAAGTAGCTGAGACTACA*CTGAGGTGGGAGGATCACTTCGGCC*CCAGAGACGGTTTGCAGTGAGCA	chr19:44860389	1	0	396/0	86/0	0/0	>=0/7	AlwI:21;DdeI:2	1
+rs12978931	2	CCCACCTCAGCCCCCCAAGTAGC*AGGATCACTTCGGCC*CCAGAGACGGTTTGCAGTGAGCA	chr19:44860399	2	0	351/0	214/0	0/0	>=0/7	AlwI:11	3
+rs112422902	1	CCCACCCCTGTAATCCTAGCACT*TTGGAAGGCCGAGA*CCTGACCTCAGGCGATCTGCCCA	chr19:44865906	1	0	3/211	133/315	59/18	>=0/>=0		1
+rs387976	1	CCCGAGGGAAAACAGACACCTCT*TCAGGAATCCAGATACAGCC*AGGGAGATAGGACACCCCTACGG	chr19:44875786	1	0	0/0	0/0	2/0	18/8	HinfI:6;TfiI:6;Hpy188III:3,10	1
+rs11668861	1	CCCCCGAGGGGGTGTGGCCCCCA*AGCTCATAGCTTTGTG*AGGACCCCACAGCACATTCAGGG	chr19:44877672	1	0	0/0	0/0	1/1	9/14		1
+rs11668861	2	CCGAGGGGGTGTGGCCCCCAAGC*TCATAGCTTTGTG*AGGACCCCACAGCACATTCAGGG	chr19:44877675	2	0	0/0	0/0	1/1	15/14		3
+rs41290120	1	AGGTTGCTGGGGGTCTCGGGAGG*GGAGGGCTGCT*CCCCACTCCCATTCTTAGGGGCC	chr19:44879401	2	0	0/0	0/0	1/0	14/11	TseI:7;Fnu4HI:8;ApeKI:7	1
+rs41290120	2	AGGTTGCTGGGGGTCTCGGGAGG*GGAGGGCTGCTCCCCACTC*CCATTCTTAGGGGCCCTGAGGGC	chr19:44879401	3	0	0/0	0/0	1/1	14/12	TseI:7;Fnu4HI:8;ApeKI:7	2
+rs41290120	3	GTTGCTGGGGGTCTCGGGAGGGG*AGGGCTGCTCCCCACTC*CCATTCTTAGGGGCCCTGAGGGC	chr19:44879403	6	0	0/0	0/0	0/1	16/12	TseI:5;Fnu4HI:6;ApeKI:5	3
+rs41290120	4	CCCCCAGGTTGCTGGGGGTCTCG*GGAGGGGAGGGCT*GCTCCCCACTCCCATTCTTAGGG	chr19:44879396	1	0	0/0	0/0	1/3	9/17		4
+rs41290120	5	GTTGCTGGGGGTCTCGGGAGGGG*AGGGCTGCTCC*CCACTCCCATTCTTAGGGGCCCT	chr19:44879403	5	0	0/0	0/0	0/0	16/17	TseI:5;Fnu4HI:6;ApeKI:5	6
+rs41290120	6	GGTTGCTGGGGGTCTCGGGAGGG*GAGGGCTGCTCC*CCACTCCCATTCTTAGGGGCCCT	chr19:44879402	4	0	0/0	0/0	0/0	27/17	TseI:6;Fnu4HI:7;ApeKI:6	9
+rs11673139	1	CGGCCTCACAAGGCTGTCGTGGG*ACCCAGTAAGGACATGCCCGTGATG*CCCTCATGCAGCCTCATTGACCT	chr19:44879757	3	0	0/0	0/0	0/1	4/11	BsrI:4;MslI:18;NspI:17	1
+rs11673139	2	CGGCCTCACAAGGCTGTCGTGGG*ACCCAGTAAGGACATG*CCCGTGATGCCCTCATGCAGCCT	chr19:44879757	2	0	0/0	0/1	0/1	4/11	BsrI:4	2
+rs11673139	3	GTGTTTCCATCGGCCTCACAAGG*CTGTCGTGGGACCCAGTAAGGACATG*CCCGTGATGCCCTCATGCAGCCT	chr19:44879747	1	0	0/0	0/1	1/1	14/11	NlaIV:11,12;BsrI:14;PpuMI:10;BsmFI:23;BmrI:8;EcoO109I:10;AvaII:10;Sau96I:10	3
+rs76692773	1	CGCGGGGCGGAATCAAAAGAGGG*CCTCCTCCAGGAGAGAGGCGGGGCGATG*CCTCAGCGGGCGTGGCAAAATGC	chr19:44890902	1	0	0/0	0/0	0/0	1/3	StyD4I:7;FauI:12;BslI:8;ScrFI:9;PspGI:7;EcoNI:6;BstNI:9	1
+rs76692773	2	CCAGGAGAGAGGCGGGGCGATGC*CTCAGCGGGCGTGGCAAAA*TGCTCAGCACAGACCAATGGCGG	chr19:44890931	2	0	0/0	0/0	0/1	14/11	Cac8I:8;DdeI:2;MspA1I:6;MwoI:12;BspCNI:15	2
+rs117264457	1	CCTGGAAGTCCAGGTGGGGCCAC*TTGCTAATTCTCATGTGTT*GCTCCGGCCCCTCCAGCTGCAGG	chr19:44901150	1	0	0/0	0/0	2/4	41/69		1
+rs1038026	1	GTAGGTAGAGCAGCCAGGCGTGG*TGACTCACGCCTGTAAT*CCCAGCATTTTGGGAGGCCAAGC	chr19:44901794	1	0	0/48	0/594	1/237	10/>=0	HinfI:3	1
+rs10119	1	CCTGGGGTCCCGGGAGGGATTCC*GGAATTGAGGGGCA*CGCAGGATTCTGAGCACCAGGGG	chr19:44903393	1	0	0/0	0/3	1/1	13/19		1
+rs449647	1	CCAACATGGTGAAACCCCATCTC*CCAGGCTGGTCTCAAACT*CCTGACCTTAAGTGATTCGCCCA	chr19:44905269	1	0	1000/6	3/275	0/150	>=0/>=0	BstNI:3;BsmAI:15;BcoDI:15;BsaI:15;ScrFI:3	1
+rs429358	1	GCGGACATGGAGGACGTGTGCGG*CCGCCTGGTGCAGTA*CCGCGGCGAGGTGCAGGCCATGC	chr19:44908666	1	0	0/0	0/0	0/1	11/6	BstNI:6;PspGI:4;StyD4I:4;ScrFI:6	1
+rs7412	1	CCTGCGCAAGCTGCGTAAGCGGC*TCCTCCGCGATGC*CGATGACCTGCAGAAGCGCCTGG	chr19:44908770	1	0	0/0	0/0	0/1	5/5		1
+rs7412	2	CCTGCGCAAGCTGCGTAAGCGGC*TCCTCCGCGATGCCGATGACCTGCAGAAG*CGCCTGGCAGTGTACCAGGCCGG	chr19:44908770	2	0	0/0	0/0	0/0	5/16	BfuAI:29;BtgZI:23;SfcI:22;PstI:26;BspMI:29	2
+rs59325138	1	CCCCCTACTGCCAGGCTGACACG*TGGTTGCGGGGGCACAAG*GCCAGCCAACCTAGAGTCTGAGG	chr19:44913005	1	1	0/0	1/0	0/3	7/11	Bsp1286I:15;BaeGI:15	1
+rs12691088	1	CCTCTGGGATTGGCTGTCCTGCT*TCGACAGCCTTGAAAGTGG*GTAAGCTGGGTGGGGGGCTCTGG	chr19:44915176	1	0	0/0	1/0	1/5	21/36		1
+rs12691088	2	CCTCTGGGATTGGCTGTCCTGCT*TCGACAGCCTTGAAAGTGGGTAAGC*TGGGTGGGGGGCTCTGGGAGAGG	chr19:44915176	2	0	0/0	1/0	1/15	21/146		3
+rs1064725	1	CCAGGAGGGGCCTCTGAAATTTC*CCACACCCCAGCGCCTG*TGCTGAGGACTCCCTCCATGTGG	chr19:44919250	1	0	1/0	0/0	0/1	11/21	AlwNI:15;BseYI:8;HaeII:15	1
+rs1064725	2	CCTCTGAAATTTCCCACACCCCA*GCGCCTGTGCTGAG*GACTCCCTCCATGTGGCCCCAGG	chr19:44919260	2	0	0/0	1/0	2/2	33/21	DdeI:11;BspCNI:3	3
+rs117664574	1	CCTCCAACATCCACTCGACCCCT*TGGAATTTCGGTGGAGAG*GAGCAGAGGTTGTCCTGGCGTGG	chr19:44924507	4	0	0/0	0/0	0/1	10/22	ApoI:4	1
+rs117664574	2	CCACCTCCAACATCCACTCGACC*CCTTGGAATTTCGGTGGAGAG*GAGCAGAGGTTGTCCTGGCGTGG	chr19:44924504	3	0	0/0	0/0	0/1	16/22	StyI:2;BsaJI:2;ApoI:7	2
+rs117664574	3	CCCATGCCACCTCCAACATCCAC*TCGACCCCTTGGAATTTCGGTGGAGAG*GAGCAGAGGTTGTCCTGGCGTGG	chr19:44924498	1	1	0/0	0/0	0/1	34/22	StyI:8;BsaJI:8;ApoI:13	5
+rs117664574	4	CCATGCCACCTCCAACATCCACT*CGACCCCTTGGAATTTCGGTGGAGAG*GAGCAGAGGTTGTCCTGGCGTGG	chr19:44924499	2	1	0/0	0/0	3/1	44/22	StyI:7;BsaJI:7;ApoI:12	6
+rs7254133	1	AGGGTAAATTTAGCAGGACGCGG*TGGCTCACGCCTGTAATC*CCAGCACTTTGGGAGTCCGAGGC	chr19:44935277	1	0	0/309	0/0	2/0	9/>=0		1
+rs141441332	1	AGGGTAAATTTAGCAGGACGCGG*TGGCTCACGCCTGTAATC*CCAGCACTTTGGGAGTCCGAGGC	chr19:44935277	1	0	0/309	0/0	2/0	9/>=0		1
+rs8102895	1	TGGGAGAAAGACGAGTACGGTGG*CCAGGTTGGTCCTT*CCATAGCCGGAAGTGGCCTTCCT	chr19:44955199	2	0	0/0	0/0	0/1	5/2	AvaII:9;BstNI:3;ScrFI:3;Sau96I:9	1
+rs8102895	2	GGCTGGGAGAAAGACGAGTACGG*TGGCCAGGTTGGTCCTT*CCATAGCCGGAAGTGGCCTTCCT	chr19:44955196	1	0	0/0	0/0	1/1	11/2	BstNI:6;AvaII:12;ScrFI:6;Sau96I:12;EaeI:2;MscI:4;PspGI:4;StyD4I:4	2
+rs75178253	1	CCTAGTGCACAGCAGGCACACCC*TCTGCACAGTCTGCTGCTTTA*GCTAGCCTGCTCCTGTAGCCAGG	chr19:44957720	1	0	0/0	0/0	2/0	32/8	HpyCH4III:9;ApeKI:14;BstAPI:11;TseI:14;MwoI:11;Fnu4HI:15	1
+rs75178253	2	CCTAGTGCACAGCAGGCACACCC*TCTGCACAGTCTGCTGCTTTAGCTAGCC*TGCTCCTGTAGCCAGGAACTCGG	chr19:44957720	2	0	0/0	0/1	2/1	32/15	HpyCH4III:9;TseI:14;ApeKI:14;BstAPI:11;Fnu4HI:15;BmtI:27;MwoI:11,20;NheI:23;Cac8I:25	2
+rs145639166	1	CCTTTGGCTAGAATGTCTTCACA*TGGCCATGGCCAGCTGCACGGGAGGCT*GGGAAATGTGGTCTTTAATCTGG	chr19:44965850	1	2	0/0	0/2	1/22	29/92	MscI:4,10;BtgI:5;NcoI:5;Fnu4HI:15;EaeI:2,8;PvuII:14;ApeKI:14;TseI:14;Cac8I:12;MwoI:23;MspA1I:14;StyI:5;BsaJI:5	1
+rs73558179	1	CCCAAAGACACTTTAATGGTAAC*TGCCGGGTGGTA*GGGCAGACTTGGGAGGTGATGGG	chr19:44973193	1	0	0/0	0/0	1/0	12/32	ScrFI:5;StyD4I:3;NciI:5	1
+rs73558179	2	CCAAAGACACTTTAATGGTAACT*GCCGGGTGGTA*GGGCAGACTTGGGAGGTGATGGG	chr19:44973194	4	0	0/0	0/0	1/0	13/32	ScrFI:4;StyD4I:2;NciI:4	2
+rs73558179	3	CCCAAAGACACTTTAATGGTAAC*TGCCGGGTGGTAG*GGCAGACTTGGGAGGTGATGGGG	chr19:44973193	2	0	0/0	0/0	1/0	12/39	ScrFI:5;StyD4I:3;NciI:5	3
+rs73558179	4	CCAAAGACACTTTAATGGTAACT*GCCGGGTGGTAG*GGCAGACTTGGGAGGTGATGGGG	chr19:44973194	5	0	0/0	0/0	1/0	13/39	ScrFI:4;StyD4I:2;NciI:4	4
+rs73558179	5	CCCAAAGACACTTTAATGGTAAC*TGCCGGGTGGTAGGGCAGACTT*GGGAGGTGATGGGGTGTGGAGGG	chr19:44973193	3	0	0/0	0/0	1/13	12/191	ScrFI:5;StyD4I:3;NciI:5	6
+rs73558179	6	CCAAAGACACTTTAATGGTAACT*GCCGGGTGGTAGGGCAGACTT*GGGAGGTGATGGGGTGTGGAGGG	chr19:44973194	6	0	0/0	0/0	1/13	13/191	ScrFI:4;StyD4I:2;NciI:4	7
+rs73558179	7	CCAAAGACACTTTAATGGTAACT*GCCGGGTGGTAGGGCAGACTTGGGA*GGTGATGGGGTGTGGAGGGGTGG	chr19:44973194	7	0	0/0	0/1	1/17	13/208	ScrFI:4;StyD4I:2;NciI:4	11
+rs145729706	1	TGGGAGAATCTTTTGGACCCCGG*AGGCGGAGATTGCAGTGAG*CCGAGATCGTGCCACTGTACTCT	chr19:44980414	1	0	0/98	4/562	262/272	>=389/>=0	EciI:19;MwoI:10	1
+rs35577563	1	GAAATATTATTATGGATGGCAGG*TGTAGAGCCCTGCCAA*CCTCTCGATCCTGAAGCTCCCCT	chr19:45001056	2	0	0/0	0/0	0/1	12/6	BanII:10;Bsp1286I:10	1
+rs35577563	2	AGGTTTCCGAAATATTATTATGG*ATGGCAGGTGTAGAGCCCTGCCAA*CCTCTCGATCCTGAAGCTCCCCT	chr19:45001048	1	0	0/0	0/0	0/1	16/6	BanII:18;Bsp1286I:18	3
+rs117612135	1	CCAGAGCAATGGGCAGCGACGCC*TGCCCAACCCCTCCTG*AGCGCCCAGCCTCCCTTTCCCGG	chr19:45001239	6	0	0/0	0/0	0/1	6/18		1
+rs117612135	2	AGTTGTCTCGTCCAGAGCAATGG*GCAGCGACGCCTGC*CCAACCCCTCCTGAGCGCCCAGC	chr19:45001228	1	0	0/0	0/0	0/0	4/31	Hpy99I:10;TseI:2;Cac8I:12;MwoI:11;Fnu4HI:3;BsaHI:8;BbvI:14;ApeKI:2	2
+rs117612135	3	GTTGTCTCGTCCAGAGCAATGGG*CAGCGACGCCTGC*CCAACCCCTCCTGAGCGCCCAGC	chr19:45001229	3	0	0/0	0/0	0/0	8/31	Hpy99I:9;Cac8I:11;MwoI:10;BsaHI:7	3
+rs117612135	4	AGTTGTCTCGTCCAGAGCAATGG*GCAGCGACGCCTGCCCAACC*CCTCCTGAGCGCCCAGCCTCCCT	chr19:45001228	2	0	0/0	0/0	0/0	4/47	Hpy99I:10;HgaI:16;TseI:2;Cac8I:12;MwoI:11;Fnu4HI:3;BsaHI:8;BbvI:14;ApeKI:2	5
+rs117612135	5	GTTGTCTCGTCCAGAGCAATGGG*CAGCGACGCCTGCCCAA*CCCCTCCTGAGCGCCCAGCCTCC	chr19:45001229	4	0	0/0	0/0	0/3	8/39	Hpy99I:9;HgaI:15;BsaHI:7;Cac8I:11;MwoI:10	6
+rs117612135	6	GTTGTCTCGTCCAGAGCAATGGG*CAGCGACGCCTGCCCAACC*CCTCCTGAGCGCCCAGCCTCCCT	chr19:45001229	5	0	0/0	0/0	0/0	8/47	Hpy99I:9;HgaI:15;BsaHI:7;Cac8I:11;MwoI:10	7
+rs4803791	1	CCAGATTGCGTCACTGCACTCCA*GCTCATTGCAACTT*CCACGTCTCAGGCTTAAGTGATC	chr19:45020271	1	0	4/0	46/3	15/112	>=0/>=294	BsrDI:4	1
+rs142380271	1	CCTGGCTAACATGGTGAAACCCA*CTGGTCTGGAACTC*CCGACCTCAGGTGATCCGCCCAC	chr19:45021764	1	0	303/672	148/2	0/0	>=0/>=0	Hpy188III:7	1
+rs34583389	1	CCAAAAAAAAAATTAGCCGGGCG*TCGTGGCGGGCGCC*CCTCCTGAGTAGCTGGGACTACA	chr19:45027072	1	0	6/1022	11/0	10/0	>=0/>=0	BsaHI:11;BanI:10;Cac8I:9;SfoI:12;KasI:10;HaeII:14;NarI:11;NlaIV:12;PluTI:14	1
+rs147188206	1	CCTTGGACTTGGCTGGCTTGTCC*CAGGGCAGAGGGAGCTGGGT*GCGCTGTGTGGCCCCAGCTGAGG	chr19:45049291	1	0	0/0	0/0	0/4	17/27	MwoI:12;BseYI:15	1
+rs147188206	2	CCAGGGCAGAGGGAGCTGGGTGC*GCTGTGTGGCCCCAGCTG*AGGAATCAGCTAAGGAATCGAGG	chr19:45049313	2	0	0/0	0/0	10/5	69/15	Sau96I:9;NlaIV:11;BseYI:12;MspA1I:16;PvuII:16	2
+rs139995984	1	CCCAAGGGAGAGGGCCCAGACCT*GCCCGCAGATGTGGACATAGGGTGT*CGGCCCAGCATGTCCCACATGGG	chr19:45071175	2	0	0/0	0/0	2/1	17/6	Cac8I:4;FauI:11;Hpy166II:14	1
+rs139995984	2	TGCCCGCAGATGTGGACATAGGG*TGTCGGCCCAGCATGTCCCACATGGGC*CCCTTTGCCCAGGGCCTCTGGCG	chr19:45071197	1	0	0/0	0/0	0/3	5/20	Sau96I:6;NspI:16;BseYI:8	2
+rs7251911	1	CCAGGTGGCGACCCGGGCTGTGC*TGGCTTCCAAGCCTGCG*AGCCAGCCCGCGACCACGTGGGG	chr19:45079109	2	0	0/0	0/0	2/0	9/3	Cac8I:14	1
+rs7251911	2	CCAGGTGGCGACCCGGGCTGTGC*TGGCTTCCAAGCCTG*CGAGCCAGCCCGCGACCACGTGG	chr19:45079109	1	0	0/0	0/0	2/3	9/1		2
+rs7251911	3	GGTGGCGACCCGGGCTGTGCTGG*CTTCCAAGCCTGCGAGCCAGC*CCGCGACCACGTGGGGCAGTGGC	chr19:45079112	3	0	0/0	0/0	1/0	18/6	Cac8I:11,15,19	5
+rs12461065	1	CCCTCGTGCTCCCCCAGCCAGCG*TGTCCTTGGCCTGCTT*GGGACATCCTGCCCCTGCATGGG	chr19:45102017	5	0	0/0	0/0	0/0	17/9	BsaJI:5;StyI:5;Cac8I:12	1
+rs12461065	2	CCTTGGATCTGAGTCCCTTCCCT*CGTGCTCCCCCAGCC*AGCGTGTCCTTGGCCTGCTTGGG	chr19:45101998	4	0	0/0	0/0	4/3	29/9	BsiHKAI:7;MwoI:11;Bsp1286I:7;BseYI:10	3
+rs12461065	3	CCCAGCCAGCGTGTCCTTGGCCT*GCTTGGGACATCCT*GCCCCTGCATGGGCTGTGGGAGG	chr19:45102029	7	0	0/0	0/0	1/6	15/39	BtsCI:9	4
+rs12461065	4	CCCTCGTGCTCCCCCAGCCAGCG*TGTCCTTGGCCTGCTTGGGACATCCT*GCCCCTGCATGGGCTGTGGGAGG	chr19:45102017	6	0	0/0	0/0	0/6	17/39	BsaJI:5;StyI:5;BtsCI:21;Cac8I:12;FokI:8	5
+rs12461065	5	CCCTTCCCTCGTGCTCCCCCAGC*CAGCGTGTCCTTGGCCTGCTT*GGGACATCCTGCCCCTGCATGGG	chr19:45102012	1	0	0/0	0/0	5/0	53/9	BsaJI:10;StyI:10;Cac8I:17	6
+rs12461065	6	CCCTTCCCTCGTGCTCCCCCAGC*CAGCGTGTCCTTGGCCTGCTTGGGACATCCT*GCCCCTGCATGGGCTGTGGGAGG	chr19:45102012	2	0	0/0	0/0	5/6	53/39	BsaJI:10;StyI:10;BtsCI:26;Cac8I:17;FokI:13	10
+rs12461065	7	CCTTCCCTCGTGCTCCCCCAGCC*AGCGTGTCCTTGGCCTGCTT*GGGACATCCTGCCCCTGCATGGG	chr19:45102013	3	0	0/0	0/0	5/0	105/9	BsaJI:9;StyI:9;Cac8I:16	11
+rs76271385	1	AGATAAGAAACTGCTACTTGGGG*TCATTGGTCACTTGCTGAAGATGGCAGAAG*CCAGGGCAGCCCTGCCTGGGTCC	chr19:45109562	2	0	0/0	0/0	1/3	25/66	BccI:15;Tsp45I:7;MboII:30	1
+rs76271385	2	CCACATTTTTGCAGATAAGAAAC*TGCTACTTGGGGTCATTGGTCACT*TGCTGAAGATGGCAGAAGCCAGG	chr19:45109550	1	0	0/0	0/0	8/1	91/30	Tsp45I:19	2
+rs145903417	1	TGGTCCACCCAGGGGAAGACAGG*AAGAGAAGTGGGCCATTCTGG*CCTCAGACCTCTTCGTCCTTTCC	chr19:45125809	1	0	0/0	0/0	2/0	9/20	Sau96I:11	1
+rs145903417	2	TGGTCCACCCAGGGGAAGACAGG*AAGAGAAGTGGGCCATTCTGGCCTCAGA*CCTCTTCGTCCTTTCCCAGACCC	chr19:45125809	2	0	0/0	0/0	2/1	9/38	BglI:19;Hpy188I:27;SfiI:19;MwoI:19;DdeI:24;Sau96I:11	2
+rs145903417	3	GGGAAGACAGGAAGAGAAGTGGG*CCATTCTGGCCTCAGA*CCTCTTCGTCCTTTCCCAGACCC	chr19:45125821	3	0	0/0	0/0	16/1	175/38	DdeI:12;Hpy188I:15	4
+rs75463276	1	GAAATGTGGAGAGTTGAGAGTGG*CTCCAGAGCTCCTGAG*CCAGGGGCTAGGACTTGAACCCT	chr19:45135541	1	0	0/0	1/0	2/0	36/18	BspCNI:5;BsiHKAI:11;Eco53kI:9;Hpy188III:4,12;SacI:11;DdeI:13;Bsp1286I:11;BanII:11	1
+rs146723120	1	GTGTGCGGCACCTCAAGAACGGG*CTCATCAGCAACCGCAGCGTGCTGCG*CCTCGGGCTGGCCTCCACCAAGC	chr19:45144912	3	0	0/0	0/0	0/3	0/11	MwoI:15;Cac8I:20;Fnu4HI:16,23;BbvI:9;TseI:15,22;ApeKI:15,22	1
+rs146723120	2	GGTGTGCGGCACCTCAAGAACGG*GCTCATCAGCAA*CCGCAGCGTGCTGCGCCTCGGGC	chr19:45144911	1	0	0/0	0/0	0/0	4/12		2
+rs146723120	3	CCGCAGCGTGCTGCGCCTCGGGC*TGGCCTCCACCAAGCTCACGT*GCGAGGGTAGGGTACGGGGCCGG	chr19:45144946	2	0	0/0	0/0	0/0	12/15		4
+rs192775394	1	CCTGGCTAACATGGTGAAACCCC*ATGGTCTTGATCTCCTGA*CCTCGTGATTCACCCACCTCGGC	chr19:45168194	1	0	596/81	0/274	0/69	>=0/>=0	Hpy188III:7,15	1
+rs192775394	2	CCTGGCTAACATGGTGAAACCCC*ATGGTCTTGATCTCCTGACCTCGTGATTCA*CCCACCTCGGCCTCCCAAAGTGC	chr19:45168194	2	1	596/966	0/57	0/0	>=0/>=0	TfiI:26;Hpy188III:7,15,23;BssSI:21;HinfI:26	3
+rs149553138	1	GGCAGCACTACCAGCGGCGCAGG*TGCAGAGCCACCGCCTGGGTCCAGATCCGC*CCCAGCACTTACCAGTGTGGGAC	chr19:45169169	5	0	0/0	0/0	0/0	11/8	PspGI:14;NlaIV:20;AlwI:19;BstNI:16;StyD4I:14;BsaJI:15;Sau96I:19;AvaII:19;Hpy188III:22;ScrFI:16;BslI:15;BstYI:24;PflMI:15	1
+rs149553138	2	GGCAGCACTACCAGCGGCGCAGG*TGCAGAGCCACCGCCTGGGT*CCAGATCCGCCCCAGCACTTACC	chr19:45169169	4	0	0/0	0/0	0/0	11/10	PspGI:14;StyD4I:14;BstNI:16;BsaJI:15;ScrFI:16;BslI:15;PflMI:15	2
+rs149553138	3	CCAGCGGCGCAGGTGCAGAGCCA*CCGCCTGGGTCCAGATCCGCCCCA*GCACTTACCAGTGTGGGACCTGG	chr19:45169179	2	0	0/0	0/0	2/1	21/6	PspGI:4;NlaIV:10;AlwI:9;BstNI:6;StyD4I:4;BsaJI:5;Sau96I:9;EciI:7;Hpy188III:12;ScrFI:6;AvaII:9;BstYI:14	5
+rs149553138	4	CCAGCGGCGCAGGTGCAGAGCCA*CCGCCTGGGTCCAGATC*CGCCCCAGCACTTACCAGTGTGG	chr19:45169179	1	0	0/0	0/0	2/0	21/10	PspGI:4;NlaIV:10;BstNI:6;StyD4I:4;BsaJI:5;Sau96I:9;Hpy188III:12;ScrFI:6;AvaII:9	6
+rs149553138	5	GCAGGTGCAGAGCCACCGCCTGG*GTCCAGATCCGCC*CCAGCACTTACCAGTGTGGGACC	chr19:45169187	3	0	0/0	0/0	2/2	38/12	Hpy188III:4;BstYI:6	9
+rs76971643	1	CCACAGCAAAGCTCCCAGAGGCA*GGGCCAGGCTGCACTCTGGTGGAACAC*GTCTGTGTCCCCACTCGCTAAGG	chr19:45169814	2	0	0/0	0/0	3/0	30/7	StyD4I:4;ScrFI:6;MslI:17;Sau96I:2;AleI:17;PspGI:4;ApeKI:9;TseI:9;Fnu4HI:10;BstNI:6	1
+rs76971643	2	CCAGAGGCAGGGCCAGGCTGCAC*TCTGGTGGAACAC*GTCTGTGTCCCCACTCGCTAAGG	chr19:45169828	1	0	0/0	0/0	0/0	110/7		2
+rs111243475	1	CCAGCACTCTGGGAGGCTGAGGC*GATTATAGGCATGAGCCA*CCGCAACTGGTCAATTACACCCT	chr19:45188270	1	0	329/0	17/0	0/2	>=0/4		1
+rs11667509	1	GTTGGGTGAAAAGACATCTAAGG*GTCTTTCTATC*CCAGGGGTGTGTGGTCCCAGGCA	chr19:45212930	3	0	0/0	0/0	0/1	13/21		1
+rs11667509	2	TGTACAGGGAGTTTGGGGTTGGG*TGAAAAGACATCTAAGGGTCTTTCTATC*CCAGGGGTGTGTGGTCCCAGGCA	chr19:45212913	1	0	0/0	0/0	0/1	26/21	DdeI:13	2
+rs11667509	3	CCACCGTGCCTGGCGTTTGTTTC*CCTTCTGTACAGGGAGTTTGGG*GTTGGGTGAAAAGACATCTAAGG	chr19:45212885	2	0	0/0	0/0	53/0	>=273/13	HpyAV:12;BsrGI:7	4
+rs10415392	1	CCGCTCACTGTAACCTCTGCCTC*AGACTGCACCACTGCACTCCAG*CCTGGGTGACGGAGCGAGACTCT	chr19:45216506	1	0	47/100	291/373	94/246	>=0/>=0	BtsI:10;BtsIMutI:10;TspRI:17;BpmI:3	1
+rs346750	1	GGTGCCGGAGCTCTTATTCTAGG*ACTGCAAGCGT*CCATGGTACTAAGGTGCTGGAAC	chr19:45233945	1	0	0/0	0/0	0/0	1/1	Cac8I:7	1
+rs11673093	1	AGCGGGGCTGCCCATCCCCAGGG*CTGCCTGCCCGCCGGCCCGGGGCCCAG*CCCAGCCGGAAGGGGGCCAGGCC	chr19:45238787	4	0	0/0	0/0	1/3	22/17	EcoO109I:21;AvaI:17;Sau96I:15,21,22;ApaI:25;NgoMIV:12;TspMI:17;BslI:19;BsaJI:17,18;NlaIV:22,23;NciI:18,19;BanII:25;ScrFI:18,19;StyD4I:16,17;XmaI:17;BsrFI:12;Cac8I:6,10,14;PspOMI:21;SmaI:19;FauI:17;Bsp1286I:25;NaeI:14;BsoBI:17;BaeGI:25	1
+rs11673093	2	GAGCGGGGCTGCCCATCCCCAGG*GCTGCCTGCCCGCCGGCCCGGGGCCCAG*CCCAGCCGGAAGGGGGCCAGGCC	chr19:45238786	3	0	0/0	0/0	1/3	25/17	EcoO109I:22;AvaI:18;NaeI:15;PspOMI:22;Sau96I:16,22,23;TseI:2;ApaI:26;ApeKI:2;TspMI:18;BslI:20;BsaJI:18,19;NlaIV:23,24;NciI:19,20;BanII:26;ScrFI:19,20;StyD4I:17,18;Fnu4HI:3;XmaI:18;BsrFI:13;Cac8I:7,11,15;SmaI:20;FauI:18;Bsp1286I:26;NgoMIV:13;BsoBI:18;BaeGI:26	2
+rs11673093	3	GAGCGGGGCTGCCCATCCCCAGG*GCTGCCTGCCCGCCGGCCCGGGGC*CCAGCCCAGCCGGAAGGGGGCCA	chr19:45238786	2	0	0/0	0/0	1/1	25/28	Cac8I:7,11,15;TseI:2;ScrFI:19,20;BsaJI:18,19;ApeKI:2;AvaI:18;NgoMIV:13;TspMI:18;BsrFI:13;Sau96I:16;FauI:18;SmaI:20;XmaI:18;NaeI:15;BslI:20;BsoBI:18;NciI:19,20;Fnu4HI:3;StyD4I:17,18	4
+rs11673093	4	CCATCCCCAGGGCTGCCTGCCCG*CCGGCCCGGGGCCC*AGCCCAGCCGGAAGGGGGCCAGG	chr19:45238798	1	0	0/0	0/0	2/2	73/34	EcoO109I:10;Bsp1286I:14;ApaI:14;AvaI:6;StyD4I:5,6;BsaJI:6,7;TspMI:6;ScrFI:7,8;PspOMI:10;Sau96I:4,10,11;SmaI:8;XmaI:6;NlaIV:11,12;BslI:8;BsoBI:6;NciI:7,8;BanII:14;BaeGI:14	7
+rs345421	1	CCCAAGCTTTTGTGGCAGAAACA*AGGCCAGCAGATGGGGGA*GCGGATGGGGGGGAGGGGACAGG	chr19:45266440	2	0	0/0	0/0	0/2	18/149	BslI:11;BccI:5;PflMI:11;Cac8I:6	1
+rs345421	2	CCCAAGCTTTTGTGGCAGAAACA*AGGCCAGCAGATGGGGGAGCG*GATGGGGGGGAGGGGACAGGAGG	chr19:45266440	3	0	0/0	0/1	0/14	18/264	BslI:11;BccI:5;PflMI:11;Cac8I:6	2
+rs345421	3	CCCAAGCTTTTGTGGCAGAAACA*AGGCCAGCAGA*TGGGGGAGCGGATGGGGGGGAGG	chr19:45266440	1	0	0/0	0/1	0/13	18/272	Cac8I:6	3
+rs183442275	1	GGAGCTGCCGCTGTCACCTACGG*TTTTTAAGTTATTACA*CCCCGACCCTCCTCCTGTCAGCC	chr19:45303256	1	0	0/0	0/0	0/3	10/22		1
+rs183442275	2	GGAGCTGCCGCTGTCACCTACGG*TTTTTAAGTTATTACACCCCGAC*CCTCCTCCTGTCAGCCCCCTCAC	chr19:45303256	3	0	0/0	0/0	0/10	10/75		3
+rs183442275	3	GGAGCTGCCGCTGTCACCTACGG*TTTTTAAGTTATTACACC*CCGACCCTCCTCCTGTCAGCCCC	chr19:45303256	2	0	0/0	0/2	0/5	10/80		4
+rs3865444	1	CCTATATCCTGCTGGACTAAACA*CCCCATGGATCTAG*GTGAGGCTGCGACTCGGGCCAGG	chr19:51224680	2	0	0/0	0/0	1/0	7/16	NcoI:4;BtgI:4;StyI:4;BstYI:8;BsaJI:4	1
+rs3865444	2	CCTATAGAATCCTATATCCTGCT*GGACTAAACACCCCATGGATCTAG*GTGAGGCTGCGACTCGGGCCAGG	chr19:51224670	1	0	0/0	0/0	2/0	9/16	NcoI:14;BtgI:14;StyI:14;BstYI:18;BsaJI:14	2
+rs55636820	1	GTGGGGTCTTCAACATTCGGGGG*CTTCAGAACCA*CCCGGGGCACTTGGGTTAAAACT	chr2:127054643	1	0	0/0	0/0	0/0	3/6	Hpy188I:6	1
+rs55636820	2	CCAAGCTTCAAAGTGGGGTCTTC*AACATTCGGGGGCTTCAGAACCACCCGG*GGCACTTGGGTTAAAACTGCAGG	chr2:127054631	5	0	0/0	0/0	4/1	5/20	NciI:26;Hpy188I:18;ScrFI:26;StyD4I:24	3
+rs55636820	3	CGGGGGCTTCAGAACCACCCGGG*GCACTTGGGTTAAAACTGCAGG*CCCCTGACCCCTCCCAGCAGCCC	chr2:127054660	2	0	0/0	0/0	1/9	13/114	PstI:21;SfcI:17	4
+rs55636820	4	GGGGGCTTCAGAACCACCCGGGG*CACTTGGGTTAAAACTGCAGG*CCCCTGACCCCTCCCAGCAGCCC	chr2:127054661	3	0	0/0	0/0	1/9	19/114	PstI:20;SfcI:16	5
+rs55636820	5	GGGGGCTTCAGAACCACCCGGGG*CACTTGGGTTAAAACTGCAGGC*CCCTGACCCCTCCCAGCAGCCCC	chr2:127054661	4	0	0/0	0/0	1/14	19/129	PstI:20;SfcI:16;Cac8I:20	7
+rs1060743	1	CCCTTACCTTGGCAATTTTGGCT*TCATCCTTCTTTTTGGCAGTTT*GAAGGGACTCGTAGTGGTGCCGG	chr2:127068917	1	0	0/0	0/0	0/0	11/8	HpyAV:16;BtsCI:2	1
+rs11694743	1	CCTTGTTCTCCCTCCATCCCCCG*CCCCGCCCCACCCCAGAGCTGC*TGCTTCACCCTCAGGTTGGGAGG	chr2:127085016	2	0	0/0	0/0	3/4	51/14	FauI:11;Fnu4HI:20;TseI:19;BbvI:6;ApeKI:19	1
+rs11694743	2	CCTTGTTCTCCCTCCATCCCCCG*CCCCGCCCCACCCCAGAGC*TGCTGCTTCACCCTCAGGTTGGG	chr2:127085016	1	0	0/0	0/0	3/2	51/19	FauI:11	2
+rs10929006	1	CCGAGATTGCACCACTGCACTCC*CTCACCGCAACCTCTGCCTCC*CCGGTTCAAGCAATTCCCCTGCC	chr2:127086556	2	0	1061/27	57/341	0/4	>=0/>=0	BstAPI:14;MwoI:14	1
+rs10929006	2	CCGAGATTGCACCACTGCACTCC*CTCACCGCAACCTCTG*CCTCCCCGGTTCAAGCAATTCCC	chr2:127086556	1	1	1061/16	57/318	0/349	>=0/>=0		2
+rs13032148	1	CCCTGAACAGAGGAGCCGCGGCT*GCTGGGAGAACGCGCC*CGGAGCCCCCTCCTTTTCCAGGG	chr2:127107484	3	0	0/0	0/0	0/0	7/11	BseYI:2	1
+rs13032148	2	GGCCCTGAACAGAGGAGCCGCGG*CTGCTGGGAGAACGCGCCCGGAGCCC*CCTCCTTTTCCAGGGGCTCACCT	chr2:127107482	2	0	0/0	0/0	2/3	22/23	Bsp1286I:26;BanII:26;BseYI:4;NciI:19;NlaIV:23;ScrFI:19;StyD4I:17;MwoI:21	3
+rs13032148	3	GGCCCTGAACAGAGGAGCCGCGG*CTGCTGGGAGAACGCGCCCGGAGC*CCCCTCCTTTTCCAGGGGCTCAC	chr2:127107482	1	0	0/0	0/0	2/0	22/33	ScrFI:19;MwoI:21;BseYI:4;StyD4I:17;NciI:19	5
+rs13032148	4	GGGGGCGCGGCCCTGAACAGAGG*AGCCGCGGCTGCTGGGAGAACGCGCCCGGAG*CCCCCTCCTTTTCCAGGGGCTCA	chr2:127107474	4	0	0/0	0/0	0/3	6/63	BseYI:12;BsaJI:4;SacII:7;ApeKI:9;StyD4I:25;NciI:27;TseI:9;ScrFI:27;MspA1I:6;MwoI:9;BtgI:4;Fnu4HI:4,7,10	6
+rs57891859	1	CCTCCCTCCTGGTCCCCACCTCT*CAGAAGCAGCCTCCGGGTTTAT*CGTTCCCAAGCACACCCACAGGG	chr2:134706994	1	0	0/0	0/0	7/1	123/7	StyD4I:13;Fnu4HI:8;ScrFI:15;BbvI:19;TseI:7;NciI:15;ApeKI:7	1
+rs6127744	1	AGCTATCCCCCACAGCTGGTTGG*GGATAGAACTTGAG*CCTGGCTTGGAAGAATGGGCACC	chr20:56411177	1	0	0/0	0/0	0/2	6/11	SmlI:10	1
+rs6127744	2	GATAGAACTTGAGCCTGGCTTGG*AAGAATGGGCA*CCATTTTGTCTAAATAAAAATGC	chr20:56411201	2	0	0/0	0/1	0/8	13/64		3
+rs75087725	1	GGTACAGCTCACTCAGGCGCTGG*CACCGGCTCACAGGCT*CCAGGGTGGAGATGCTGTTGACA	chr21:44333201	1	0	0/0	0/0	2/0	3/15	BsrFI:3	1
+rs45486093	1	CGGGGGCGGCAGTGCCACACGGG*CCCACAGAGCTGTCCCCTGT*CCCCGGAGGGCCACGCAGTACCT	chr4:881843	5	0	0/0	0/0	1/0	12/9		1
+rs45486093	2	CCACACGGGCCCACAGAGCTGTC*CCCTGTCCCCGGAG*GGCCACGCAGTACCTTTTGTGGG	chr4:881857	6	0	0/0	0/0	1/0	21/4	BsaJI:8;NciI:10;BslI:9;ScrFI:10;StyD4I:8	2
+rs45486093	3	GCGGGGGCGGCAGTGCCACACGG*GCCCACAGAGCTGTCCCCTGT*CCCCGGAGGGCCACGCAGTACCT	chr4:881842	4	0	0/0	0/0	2/0	16/9	MwoI:8	5
+rs45486093	4	GAGCTGTCCCCTGTCCCCGGAGG*GCCACGCAGTA*CCTTTTGTGGGATGGCCAGATGC	chr4:881872	8	0	0/0	0/0	2/1	14/11		6
+rs45486093	5	GCGGGGGCGGCAGTGCCACACGG*GCCCACAGAGCTGTC*CCCTGTCCCCGGAGGGCCACGCA	chr4:881842	3	0	0/0	0/0	2/0	16/12	MwoI:8	7
+rs45486093	6	AGGAGACACCACAGCGGGGGCGG*CAGTGCCACACGGGCCCACAGAGCTGTC*CCCTGTCCCCGGAGGGCCACGCA	chr4:881829	2	0	0/0	0/0	2/0	25/12	Bsp1286I:17;BglI:12;BanII:17;BaeGI:17;MwoI:12,21;TspRI:8;NlaIV:15;PspOMI:13;ApaI:17;BtsIMutI:8;Sau96I:13,14	10
+rs45486093	7	AGGAGACACCACAGCGGGGGCGG*CAGTGCCACACGGG*CCCACAGAGCTGTCCCCTGTCCC	chr4:881829	1	0	0/0	0/0	2/2	25/22	TspRI:8;BtsIMutI:8	12
+rs45486093	8	CCCACAGAGCTGTCCCCTGTCCC*CGGAGGGCCACGCAGTACCTTTTG*TGGGATGGCCAGATGCCTGGTGG	chr4:881866	7	0	0/0	0/0	2/5	22/73	Sau96I:6	15
+rs3775121	1	CCCAGGGTTAGATGCAGACGCTC*TCCAACCACAGCGCCC*TGCAGACCCCAGTCCTAGAGAGG	chr4:899713	1	0	0/0	0/1	0/1	4/17	HaeII:15	1
+rs3775121	2	CCAGGGTTAGATGCAGACGCTCT*CCAACCACAGCGCCC*TGCAGACCCCAGTCCTAGAGAGG	chr4:899714	2	0	0/0	0/1	0/1	4/17	HaeII:14	2
+rs6599388	1	GCCTCAGTTTCTGTTTCCCCAGG*CCCCCGCCGTCTCTGTCTCCTCACT*CCCCGCCGTTTGTTGCTGCCTCA	chr4:945270	1	0	0/0	0/0	1/0	37/5	BsmAI:15,21;BsmBI:15;BseRI:9;BcoDI:15,21;Esp3I:15;FauI:12	1
+rs6599388	2	GCCTCAGTTTCTGTTTCCCCAGG*CCCCCGCCGTCTCTGTCTCCTCACTCC*CCGCCGTTTGTTGCTGCCTCAGC	chr4:945270	2	0	0/0	0/0	1/0	37/12	BsmAI:15,21;BsmBI:15;BseRI:9;BcoDI:15,21;Esp3I:15;FauI:12	3
+rs34311866	1	GCATCTTCCAGCTGGCCATGTGG*ACCACGGCGCTGCTGCA*CCAGGCGGAGACGCTGCAGCCCT	chr4:958141	2	0	0/0	0/0	1/0	23/19	Fnu4HI:11,14;BtgI:3;ApeKI:10,13;TseI:10,13;HaeII:11;BsaJI:3	1
+rs34311866	2	CCATCATCTTCCTGGCCAGCATC*TTCCAGCTGGCCATGTG*GACCACGGCGCTGCTGCACCAGG	chr4:958123	1	0	0/0	0/0	4/1	54/6	EaeI:9;MspA1I:7;PvuII:7;Cac8I:9;MscI:11	2
+rs4690229	1	CCCCCAGCACCTCAGAATGAGAC*TTGTTTGGAGACA*GAGTCTTTACAGAGAAAATCAGG	chr4:976917	1	1	3/1	27/2	319/1	>=34/28	BsmAI:3;BcoDI:3	1
+rs4690229	2	CCCCAGCACCTCAGAATGAGACT*TGTTTGGAGACA*GAGTCTTTACAGAGAAAATCAGG	chr4:976918	2	1	2/1	32/2	320/1	>=56/28	BsmAI:2;BcoDI:2	3
+rs4373155	1	CCTGATAGAGGTGCCATCAGTCT*GCACCACCTTGAAGCTGGTCTGTGT*GTATGCAGAACTGGTAACTGAGG	chr4:11021126	1	0	0/0	0/0	2/0	7/12	XcmI:12	1
+rs356162	1	CCAGCACCTCAGTACCAATAACA*GATATTTCATGTTATATAGTGG*GGTCATTAAGGACTTATTTGAGG	chr4:89775988	1	0	0/0	0/0	0/0	12/6		1
+rs33915496	1	CCTTTTTGTTCTATTTGGGTCCT*CAATGGACTGAAT*GATGCCCACCCATATTAGTGAGG	chr6:32616150	1	14	8/2	49/9	155/44	>=87/197		1
+rs143202663	1	CCAGCCTGGCAGCACATACGTCT*AGAGCCACCCC*AGGTTCTCACTTCACTCTCTGGG	chr6:40897479	1	0	0/0	0/0	0/2	3/44		1
+rs143332484	1	CCACAAGTTGTGCGTGCTGACCA*CACGCTGGCATG*GGCCCTTCTCTCCCAGCTGGCGG	chr6:41161444	1	0	0/0	0/0	0/3	2/33	Cac8I:7	1
+rs9395259	1	CCTGACCTCAGGTGATCTGCCCG*AGTTCGAGACCAG*CCTGGCTAACATGGTGAAAACCC	chr6:47440202	1	0	701/302	75/160	0/0	>=0/>=0	Hpy188III:6	1
+rs9268840	1	CCTACTTTTTTGCAGCAACAATC*ATGTCTTCACCCCATGGG*GTGGTGGAGTAAGGAGCCTGCGG	chr6:3793237	1	0	0/0	0/0	0/1	5/28	BsaJI:13;BtgI:13;StyI:13;NcoI:13	1
+rs9268840	2	CCTACTTTTTTGCAGCAACAATC*ATGTCTTCACCCCATGGGGTGGTGGAGTA*AGGAGCCTGCGGAGGCTCCCAGG	chr6:3793237	2	0	0/0	0/0	0/4	5/32	BsaJI:13;StyI:13;BtgI:13;PflMI:19;BslI:19;NcoI:13	3
+rs1980493	1	GATCCCAGTTTTTGTTTGGATGG*CTATCACCTTT*CCCCAGTGCATCCTGTGTTTTAC	chr6:3833494	1	0	0/0	0/0	1/0	6/13		1
+rs1980493	2	GATCCCAGTTTTTGTTTGGATGG*CTATCACCTTTCC*CCAGTGCATCCTGTGTTTTACCA	chr6:3833494	2	0	0/0	0/0	1/0	6/18		3
+rs3957148	1	CCATGTTAATCAGGCTCATCTCA*AACTCCTGACCTCGGG*AGCCACCTGCCTCGGCCTCCAGG	chr6:4127613	2	0	0/0	1/14	134/46	>=363/>=7	BslI:12;BsaJI:11;Hpy188III:6;BsoBI:12;AvaI:12	1
+rs3957148	2	CCTGATTAACATGGTGAAACCCC*CTCATCTCAAACTCCTGA*CCTCGGGAGCCACCTGCCTCGGC	chr6:4127604	1	0	48/0	296/22	27/338	>=0/>=67	Hpy188III:15	3
+rs33915496	1	CCCTTGCTGGGCAAGGCTGCCTC*TCCCAGCACTGCTGGCAGACAGGTTAGCTCA*TGCCTGCATGCATGTCACTCAGG	chr6:3854536	1	0	0/0	0/0	0/0	16/15	Cac8I:14;BseYI:3;BtsI:7;TspRI:14;BtsIMutI:7;MwoI:13	1
+rs33915496	2	GCTGCCTCTCCCAGCACTGCTGG*CAGACAGGTTAGCTCATG*CCTGCATGCATGTCACTCAGGTC	chr6:3854551	2	0	0/0	0/0	1/0	97/6		3
+rs9268544	1	CCTACTGGCAAGACCTCATTGCG*CACGGACTAGTAACAGTAAAACTTCTTCAG*TGAAGGCTGAGCAGGGGATGAGG	chr6:3721878	1	0	0/0	0/0	0/6	5/79	MboII:17;HpyCH4III:16;SpeI:7;AcuI:11	1
+rs9275111	1	CCAGTGGAAGGAGGTGCAAAGTC*ATGTTGCAGGG*GGCTTCGGTACAGGACAGGTGGG	chr6:4101447	1	0	0/0	0/0	2/1	15/6		1
+rs9268544	1	CCTTAACTAGACATAAAGGTTCT*GATTGTAAATACA*CCAATCGGCACTCTGTATCTAGC	chr6:3758603	1	14	7/308	338/0	35/0	>=0/>=0		1
+rs2858331	1	AGAAATTTCAAAGGACTTACAGG*ATGGATGGTGATTATAACGTTATGAAATGAC*CCTTTGATAATGTATTCAATTCT	chr6:4012181	1	0	0/0	0/0	3/2	27/29	FokI:17;PsiI:15;HphI:20;AclI:18;BtsCI:10	1
+rs149839148	1	GCTGGTCCAGCCGAGTGCACAGG*ATACGGCTGCTTCCTCC*CCTGGCTGCTTTCCTCTGGTGAC	chr6:3813282	1	0	0/0	0/1	0/5	14/33	TseI:7;Fnu4HI:8;ApeKI:7	1
+rs9275111	1	GAGGCGTTGGGACTACATCTTGG*CTCTTCAGGGCTAAAGTCTTCTTTT*CCTAAGAACCAGATCTGCACCCC	chr6:3876218	1	0	0/0	0/0	0/0	4/11	EarI:8;BbsI:10;MboII:10	1
+rs9275111	2	GACTACATCTTGGCTCTTCAGGG*CTAAAGTCTTCTTTT*CCTAAGAACCAGATCTGCACCCC	chr6:3876228	2	0	0/0	0/0	1/0	8/11		3
+rs9275614	1	GACATAGAGTCAGAAGCCCTAGG*TCCCAGCTCTGGC*CCCACTGTGAACAAGCTGATTTC	chr6:3910680	1	0	0/0	1/0	7/4	66/19	BseYI:3;BslI:9	1
+rs1980493	1	CCTTTGTGACTTATCACAGCAGC*TCTGACATTTATTAAT*GCATAACTATAAGCCAGGCACGG	chr6:3711308	1	0	0/0	0/0	0/0	10/50	AseI:13;Hpy188I:4	1
+rs3957148	1	GCCTCTGAGGCAGAAGTATTAGG*TTGGTGCAAAAGTAACTGCAGTTTTG*CCTTACTTCTAATACCATGCTCC	chr6:4114449	1	0	0/0	0/0	1/0	15/2	SfcI:17;PstI:21	1
+rs3935067	1	GATGAATGGATCTCAGATTGAGG*ATGCTTTTCTGCCTTTTCTATC*CCTCCCCAAGCAAAGCACTGGTC	chr7:143407217	2	0	0/0	0/0	1/0	18/11		1
+rs3935067	2	TGCAACTTCATTGGGATGAATGG*ATCTCAGATTGAGGATGCTTTTCTG*CCTTTTCTATCCCTCCCCAAGCA	chr7:143407203	1	0	0/0	0/0	0/3	17/29	DdeI:4;SfaNI:5;BtsCI:20;Hpy188I:7;BspCNI:17	2
+rs755951	1	CCCTACAGCTTACCTTCTACCCT*CTTATAATCACA*GGATCCCTTCACTGGCATGTAGG	chr8:27369222	5	0	0/0	0/0	1/0	13/8	PsiI:5	1
+rs755951	2	CCCTCTTATAATCACAGGATCCC*TTCACTGGCATGTAGGGGGACCT*GAGATGACCAGGCCCTGTGCTGG	chr8:27369241	2	0	0/0	0/0	0/1	11/31	PpuMI:19;MslI:8;NspI:13;BtsIMutI:3;NlaIV:20;EcoO109I:19;BsrI:10;AvaII:19;Sau96I:19;TspRI:10	3
+rs755951	3	CCTCTTATAATCACAGGATCCCT*TCACTGGCATGTAGGGGGACCT*GAGATGACCAGGCCCTGTGCTGG	chr8:27369242	3	0	0/0	0/0	1/1	11/31	PpuMI:18;MslI:7;NspI:12;BtsIMutI:2;NlaIV:19;EcoO109I:18;BsrI:9;AvaII:18;Sau96I:18;TspRI:9	4
+rs755951	4	CCTTCTACCCTCTTATAATCACA*GGATCCCTTCACTGGCATGTAGGGGGACCT*GAGATGACCAGGCCCTGTGCTGG	chr8:27369234	1	0	0/0	0/0	0/1	21/31	AvaII:26;MslI:15;HpyAV:17;NspI:20;BtsIMutI:10;AlwI:10;NlaIV:4,27;EcoO109I:26;TspRI:17;BsrI:17;Sau96I:26;BamHI:2;BslI:12;BstYI:2;PpuMI:26	5
+rs755951	5	CCTTCACTGGCATGTAGGGGGAC*CTGAGATGACCAGGCCCTG*TGCTGGGCCTGGGGGATCCAGGG	chr8:27369262	9	0	0/0	0/0	0/6	7/60	AlwNI:17;StyD4I:10;EcoO109I:14;ScrFI:12;DdeI:2;Sau96I:14;PspGI:10;BstNI:12	9
+rs755951	6	GGATCCCTTCACTGGCATGTAGG*GGGACCTGAGATGACCAGGC*CCTGTGCTGGGCCTGGGGGATCC	chr8:27369257	6	0	0/0	0/0	0/5	8/72	BsmFI:16;AvaII:3;BstNI:17;NlaIV:4;EcoO109I:3;ScrFI:17;PspGI:15;DdeI:7;StyD4I:15;PpuMI:3;Sau96I:3	10
+rs755951	7	GATCCCTTCACTGGCATGTAGGG*GGACCTGAGATGACCAGGC*CCTGTGCTGGGCCTGGGGGATCC	chr8:27369258	7	0	0/0	0/0	1/5	7/72	AvaII:2;StyD4I:14;ScrFI:16;DdeI:6;Sau96I:2;PspGI:14;BstNI:16	11
+rs755951	8	CCTTCACTGGCATGTAGGGGGAC*CTGAGATGACCAGGCCCT*GTGCTGGGCCTGGGGGATCCAGG	chr8:27369262	8	0	0/0	0/0	0/3	7/91	StyD4I:10;DdeI:2;EcoO109I:14;ScrFI:12;PspGI:10;Sau96I:14;BstNI:12	14
+rs755951	9	CCTCTTATAATCACAGGATCCCT*TCACTGGCATGTAGGGGGACCTGAGATGACC*AGGCCCTGTGCTGGGCCTGGGGG	chr8:27369242	4	0	0/0	0/15	1/23	11/197	BsmFI:31;PpuMI:18;NspI:12;BtsIMutI:2;NlaIV:19;EcoO109I:18;Sau96I:18;BsrI:9;AvaII:18;BspCNI:14;MslI:7;TspRI:9;DdeI:22	16
+rs2640724	1	CCAGGACTTGATACCAGTCAGTC*CTTGTGTTGGCCACAGCCCC*TGGGCCCCTTGCAGAGCTTTGGG	chr8:27558028	1	0	0/0	0/0	2/1	22/19	EaeI:9;MscI:11	1
+rs2640724	2	CCAGTCAGTCCTTGTGTTGGCCA*CAGCCCCTGGGCCCCTTGCAGAGCTT*TGGGACAGTGAGTGTGGAGAAGG	chr8:27558041	2	0	0/0	0/0	0/4	5/76	BaeGI:14;ScrFI:8;ApaI:14;Sau96I:10,11;AlwNI:7;Bsp1286I:14;PspGI:6;BstNI:8;BsaJI:6,7;BanII:14;StyD4I:6;NlaIV:12,13;PspOMI:10;EcoO109I:11	3
+rs7831810	1	CCTTCGAGGACAGGAGCATTCCA*CGGGTGAGAGGACGCAGA*GGCTGCCATGAAGGAAACAAAGG	chr8:27572975	2	0	0/0	0/0	0/1	0/21	HphI:16	1
+rs7831810	2	AGGGGACACCCAGGGAGAATGGG*TTTGGGTGACAAGAGGG*CCTTCGAGGACAGGAGCATTCCA	chr8:27572935	1	0	0/0	0/0	2/0	17/0	Tsp45I:6	2
+rs4732729	1	TGCCTACTGCGCTTGGCGCTTGG*GAACAGAATCA*CCGGGGAGTCCCAGGGGGATGAC	chr8:27603941	1	0	0/0	0/0	0/2	6/18	TfiI:7;HinfI:7	1
+rs485902	1	CCTTCAACTGGGCAAGTGCCCCA*AGAGGTGGGCTTTCAATGTCGGA*GAGCCAAAAAACTCCACCCTTGG	chr8:27632411	1	0	0/0	0/0	0/1	5/39	Hpy188I:22	1
+rs485902	2	TGGGCAAGTGCCCCAAGAGGTGG*GCTTTCAATGTCGGAGAG*CCAAAAAACTCCACCCTTGGATC	chr8:27632419	2	0	0/0	0/1	0/5	16/18	Hpy188I:14	2
+rs485902	3	GGGCAAGTGCCCCAAGAGGTGGG*CTTTCAATGTCGGAGAG*CCAAAAAACTCCACCCTTGGATC	chr8:27632420	3	0	0/0	0/1	0/5	22/18	Hpy188I:13	4
+rs485902	4	GGGCAAGTGCCCCAAGAGGTGGG*CTTTCAATGTCGGAGAGCCAAAAAACTCCA*CCCTTGGATCATGCTAACCCTGC	chr8:27632420	4	0	0/0	0/4	0/31	22/42	Hpy188I:13	6
+rs112136718	1	CCGCCAGGATGCGGTTCATCTCC*TCGTCGAAGTAGCC*GCAGCGGTAGGCCACGTCCACGG	chr8:143868096	1	1	0/0	2/0	1/7	3/4	Hpy99I:7	1
+rs112136718	2	CCAGGATGCGGTTCATCTCCTCG*TCGAAGTAGCC*GCAGCGGTAGGCCACGTCCACGG	chr8:143868099	2	7	0/0	2/0	8/7	4/4		3
+rs112136718	3	CGCTGGGGTCCGCCAGGATGCGG*TTCATCTCCTCGTCGAAGTAG*CCGCAGCGGTAGGCCACGTCCAC	chr8:143868087	3	7	0/0	2/0	2/7	16/4	Hpy99I:16	4
+rs148703839	1	CCCATTATTTTGGGAAGCTCCAC*CCCTGTGGCTTTGCAGGGTACAGCCTCCC*CCAGCCCATGAAAGCAGCCAGCA	chr9:27465373	1	2	0/5	0/299	4/2	71/>=0		1
+rs148703839	2	CCATTATTTTGGGAAGCTCCACC*CCTGTGGCTTTGCAGGGTACAGCCTCCC*CCAGCCCATGAAAGCAGCCAGCA	chr9:27465374	2	3	0/5	0/299	5/2	64/>=0		2
+rs148703839	3	GAAGTGGGTTCCCATTATTTTGG*GAAGCTCCACC*CCTGTGGCTTTGCAGGGTACAGC	chr9:27465363	3	10	0/317	0/6	13/0	142/>=0		5
+rs78752429	1	CCTCAGAATCATAGTGGGAGGCA*GAAGGCACTTCTTATAC*CCTCATTTTCTCTTGCTGCTGCC	chr9:27466643	1	13	6/146	150/116	154/20	>=34/>=0		1
+rs4879515	1	GAGACCTAACATTAAAGGACGGG*AAAAACATTAAATAAT*CCAAACATAAAGCACATGGAGCC	chr9:27482218	1	0	0/0	0/0	1/1	6/6		1

data/E-CRISP/E-CRISP_NGG.csv

@@ -0,0 +1,461 @@
+Name,Length,Start,End,Strand,Nucleotide sequence,Gene Name,Transcripts,Transcript:: Exon,Number of Cpg Islands hit,Sequence around the cutside,%A %C %T %G,S-Score,A-Score,E-Score,percent of total transcripts hit,Target,Match-start,Match-end,Matchstring,Editdistance,Number of Hits,Direction,CDS_score,Exon_Score,seed_GC,Doench_Score,Xu_score,Chromosome,Genomic start,Genomic End
+rs10444323,23,21,44,minus,GGTGAATTACATGGAGGAGA NGG,NA,NA,,NA,NA,24 44 28 4,100,0,71.7233,NA,ENSG00000080854::IGSF9B,32697,32720,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.445576116548473,0.4405890676,,-479,-456
+rs12726330,23,26,49,plus,GGTACTGGGAAGGCGCTCGG NGG,NA,NA,,NA,NA,20 16 12 50,100,0,56,NA,ENSG00000169241::SLC50A1,348,371,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0,0,,-474,-451
+rs12726330,23,12,35,plus,GAGGTCTGGACCAGGGTACT NGG,NA,NA,,NA,NA,24 16 16 44,100,0,50.9854,NA,ENSG00000169241::SLC50A1,334,357,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.00798846125214639,-0.0587156356,,-488,-465
+rs75548401,23,23,46,minus,GTACAGCCACAGCATCATCA NGG,NA,NA,,NA,NA,12 20 32 36,80,0,69.6023,NA,ENSG00000262446::GBA,1796,1819,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.5,0.766901745678145,0.2132149904,,-477,-454
+rs75548401,23,23,46,minus,GTACAGCCACAGCATCATCA NGG,NA,NA,,NA,NA,12 20 32 36,80,0,69.6023,NA,ENSG00000177628::GBA,1792,1815,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.5,0.766901745678145,0.2132149904,,-477,-454
+rs75548401,23,17,40,plus,GGCTTACCGTGATGATGCTG NGG,NA,NA,,NA,NA,12 20 32 36,48.6956,0,58.6368,NA,ENSG00000262446::GBA,1790,1813,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0.123796371619103,0.3080480824,,-483,-460
+rs75548401,23,17,40,plus,GGCTTACCGTGATGATGCTG NGG,NA,NA,,NA,NA,12 20 32 36,48.6956,0,58.6368,NA,ENSG00000177628::GBA,1786,1809,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0.123796371619103,0.3080480824,,-483,-460
+rs75548401,23,17,40,plus,GGCTTACCGTGATGATGCTG NGG,NA,NA,,NA,NA,12 20 32 36,48.6956,0,58.6368,NA,ENSG00000160766::GBAP1,1735,1758,MMMMMMMXMMMMMMMMMMMMMMM,1,4,fw,0,0,0.5,0.123796371619103,0.3080480824,,-483,-460
+rs75548401,23,17,40,plus,GGCTTACCGTGATGATGCTG NGG,NA,NA,,NA,NA,12 20 32 36,48.6956,0,58.6368,NA,ENSG00000263231::RP11-263K19.8,1188,1211,MMMMMMMXMMMMMMMMMMMMMMM,1,4,fw,0,0,0.5,0.123796371619103,0.3080480824,,-483,-460
+rs10769263,23,0,23,plus,GAAGAGAGCAGAGCATTTCA NGG,NA,NA,,NA,NA,32 16 20 32,100,0,52.3576,NA,ENSG00000255197::RP11-750H9.5,12459,12482,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0,0.2178834552,,-500,-477
+rs202122669,23,20,43,minus,GCTGAAGCAGAGGCGGCCGA NGG,NA,NA,,NA,NA,12 44 20 24,100,0,67.1288,NA,ENSG00000186104::CYP2R1,14654,14677,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0.179638809270434,0.3768027196,,-480,-457
+rs202122669,23,8,31,minus,GCGGCCGATGGGCTTCCCCC NGG,NA,NA,,NA,NA,12 40 8 40,100,0,66.3065,NA,ENSG00000186104::CYP2R1,14642,14665,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0.176933805031672,0.3383919576,,-492,-469
+rs202122669,23,27,50,minus,GCCAGCTGCTGAAGCAGAGG NGG,NA,NA,,NA,NA,8 43 21 26,100,0,64.2018,NA,ENSG00000186104::CYP2R1,14661,14684,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0,0.5100905692,,-473,-450
+rs202122669,23,4,27,plus,GGCCCCGGGGGGAAGCCCAT NGG,NA,NA,,NA,NA,12 40 4 44,100,0,60.0781,NA,ENSG00000186104::CYP2R1,14638,14661,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.139120601804929,0.2647893664,,-496,-473
+rs202122669,23,26,49,plus,GCCGCCTCTGCTTCAGCAGC NGG,NA,NA,,NA,NA,8 41 20 29,100,0,52,NA,ENSG00000186104::CYP2R1,14660,14683,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0,0,,-474,-451
+rs202122669,23,6,29,minus,GGCCGATGGGCTTCCCCCCG NGG,NA,NA,,NA,NA,12 44 4 40,100,0,39.3221,NA,ENSG00000186104::CYP2R1,14640,14663,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.9,0.0661064820441919,0,,-494,-471
+rs7912495,23,21,44,minus,GGACGTCTTACCTGGATATG NGG,NA,NA,,NA,NA,28 36 16 20,100,0,57.0813,NA,10,11676710,11676733,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.226262347359626,0.12780704,,-479,-456
+rs7912495,23,11,34,plus,GAAGTGCTTACCGCATATCC NGG,NA,NA,,NA,NA,28 24 24 24,100,0,56.5898,NA,10,11676700,11676723,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0329131562805056,0.2965803156,,-489,-466
+rs117027576,23,10,33,plus,GTGTTAAGTTACTTATTCTA NGG,NA,NA,,NA,NA,28 8 44 20,100,0,47.8434,NA,12,56922804,56922827,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.2,0.144446936506453,0.0477239908,,-490,-467
+rs564123,23,24,47,plus,GGGAAACCAAACCCACATCC NGG,NA,NA,,NA,NA,40 32 4 24,100,0,53.5717,NA,ENSG00000080854::IGSF9B,40957,40980,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.0785864987004691,0,,-476,-453
+rs564123,23,13,36,minus,GTTTGGTTTCCCCCTGTATT NGG,NA,NA,,NA,NA,44 32 4 20,100,0,44.344,NA,ENSG00000080854::IGSF9B,40946,40969,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.4,0.0340584198605274,-0.2168538964,,-487,-464
+rs564123,23,2,25,plus,GATAGAGAAACCCAAATACA NGG,NA,NA,,NA,NA,44 16 8 32,84.3478,0,54.3115,NA,ENSG00000080854::IGSF9B,40935,40958,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.4,0,0.3155759868,,-498,-475
+rs564123,23,2,25,plus,GATAGAGAAACCCAAATACA NGG,NA,NA,,NA,NA,44 16 8 32,84.3478,0,54.3115,NA,ENSG00000155974::GRIP1,205589,205612,MMMMMMMMMMMMXMMMMMMMMMM,1,2,rc,0,0,0.4,0,0.3155759868,,-498,-475
+rs4944549,23,22,45,minus,GGAGCCGAAGGCACTTGGCG NGG,NA,NA,,NA,NA,8 52 20 20,100,0,73.1958,NA,11,85941205,85941228,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.429832769190593,0.5299609232,,-478,-455
+rs4944549,23,23,46,minus,GGGAGCCGAAGGCACTTGGC NGG,NA,NA,,NA,NA,8 48 20 24,100,0,59.5232,NA,11,85941206,85941229,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.0814800639660399,0.1946848496,,-477,-454
+rs4944549,23,5,28,minus,GCGGGGCAGAGCCCAATACA NGG,NA,NA,,NA,NA,8 40 28 24,100,0,51.3675,NA,11,85941188,85941211,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.4,0.16837945918516,0,,-495,-472
+rs4944549,23,26,49,plus,GCCAAGTGCCTTCGGCTCCC NGG,NA,NA,,NA,NA,8 41 20 29,84.3478,0,56,NA,11,85941209,85941232,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.8,0,0,,-474,-451
+rs4944549,23,26,49,plus,GCCAAGTGCCTTCGGCTCCC NGG,NA,NA,,NA,NA,8 41 20 29,84.3478,0,56,NA,X,82372588,82372611,MMMMMMMMMMMMMMMMMMMMMMX,1,2,rc,0,0,0.8,0,0,,-474,-451
+rs4944549,23,27,50,minus,GCCAGGGAGCCGAAGGCACT NGG,NA,NA,,NA,NA,8 43 21 26,64.3478,0,53.5548,NA,11,85941210,85941233,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.5,0,0.1777433388,,-473,-450
+rs4944549,23,27,50,minus,GCCAGGGAGCCGAAGGCACT NGG,NA,NA,,NA,NA,8 43 21 26,64.3478,0,53.5548,NA,X,82372587,82372610,MMMMMMMMMMMMMMMMMMMMMMM,0,3,fw,0,0,0.5,0,0.1777433388,,-473,-450
+rs4944549,23,27,50,minus,GCCAGGGAGCCGAAGGCACT NGG,NA,NA,,NA,NA,8 43 21 26,64.3478,0,53.5548,NA,ENSG00000253417::RP11-109J4.1,5678,5701,MMMMMMMMMMMXMMMMMMMMMMM,1,3,fw,0,0,0.5,0,0.1777433388,,-473,-450
+rs147767029,23,20,43,minus,GCGCCCAGCCCAGCCAGGCT NGG,NA,NA,,NA,NA,4 36 12 48,84.3478,0,63.5279,NA,ENSG00000101850::GPR143,28996,29019,MMMMMMMMMMMMMMMMMMMMXMM,1,2,rc,0,0,0.8,0.132968218033254,0.2434304976,,-480,-457
+rs147767029,23,20,43,minus,GCGCCCAGCCCAGCCAGGCT NGG,NA,NA,,NA,NA,4 36 12 48,84.3478,0,63.5279,NA,ENSG00000073712::FERMT2,93848,93871,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.8,0.132968218033254,0.2434304976,,-480,-457
+rs147767029,23,13,36,minus,GCCCAGCCAGGCTCGGACAG NGG,NA,NA,,NA,NA,4 36 24 36,84.3478,0,63.4501,NA,ENSG00000073712::FERMT2,93841,93864,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.6,0.123570385004747,0.4489363744,,-487,-464
+rs147767029,23,13,36,minus,GCCCAGCCAGGCTCGGACAG NGG,NA,NA,,NA,NA,4 36 24 36,84.3478,0,63.4501,NA,ENSG00000145284::SCD5,64131,64154,MMMXMMMMMMMMMMMMMMMMMMM,1,2,rc,0,0,0.6,0.123570385004747,0.4489363744,,-487,-464
+rs113247976,23,24,47,minus,GCCTTCTGGTAGGAAGCCAA NGG,NA,NA,,NA,NA,20 40 20 20,100,0,58.2689,NA,ENSG00000155980::KIF5A,31918,31941,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0,0.3134467524,,-476,-453
+rs113247976,23,25,48,minus,GGCCTTCTGGTAGGAAGCCA NGG,NA,NA,,NA,NA,24 36 20 20,84.3478,0,58.1611,NA,ENSG00000155980::KIF5A,31919,31942,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.6,0,0.3080550372,,-475,-452
+rs113247976,23,25,48,minus,GGCCTTCTGGTAGGAAGCCA NGG,NA,NA,,NA,NA,24 36 20 20,84.3478,0,58.1611,NA,ENSG00000206579::XKR4,420931,420954,MMMMMMMXMMMMMMMMMMMMMMM,1,2,rc,0,0,0.6,0,0.3080550372,,-475,-452
+rs147288664,23,17,40,plus,GACGTGAGCTGGAGCCATGT NGG,NA,NA,,NA,NA,16 24 20 40,100,0,53.3052,NA,ENSG00000197915::HRNR,8361,8384,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0661111362578136,0.099152526,,-483,-460
+rs147288664,23,6,29,plus,GCTGGAAGACTGACGTGAGC NGG,NA,NA,,NA,NA,24 16 16 44,84.3478,0,60.089,NA,ENSG00000197915::HRNR,8350,8373,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.6,0.176950716744749,0.2275001868,,-494,-471
+rs147288664,23,6,29,plus,GCTGGAAGACTGACGTGAGC NGG,NA,NA,,NA,NA,24 16 16 44,84.3478,0,60.089,NA,12,53371395,53371418,MMMMMMMMMMXMMMMMMMMMMMM,1,2,rc,0,0,0.6,0.176950716744749,0.2275001868,,-494,-471
+rs41292019,23,14,37,plus,GCTACTGCAAATGTCTTTCG NGG,NA,NA,,NA,NA,24 20 32 24,100,0,60.7507,NA,ENSG00000183735::TBK1,4045,4068,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.32147638303067,0.2160635348,,-486,-463
+rs12118655,23,8,31,plus,GAAATATTGCAGGGGCTATA NGG,NA,NA,,NA,NA,28 12 28 32,100,0,47.0816,NA,1,205694333,205694356,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0784203670944018,-0.2243391448,,-492,-469
+rs55661415,23,3,26,minus,GGTTGGTAGAATTCAGACTC NGG,NA,NA,,NA,NA,32 32 24 12,100,0,52.1162,NA,11,60184821,60184844,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.105810811191282,0,,-497,-474
+rs1491942,23,15,38,minus,GTGCTATACTTGACAACCCA NGG,NA,NA,,NA,NA,20 24 28 28,100,0,68.9052,NA,ENSG00000188906::LRRK2,30249,30272,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.514827689509768,0.3304345664,,-485,-462
+rs76763715,23,15,38,plus,GTACAGGAGGTTCTAGGGTA NGG,NA,NA,,NA,NA,28 12 20 40,40,0,57.7005,NA,ENSG00000160766::GBAP1,1330,1353,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0.136046086484631,0.2489821228,,-485,-462
+rs76763715,23,15,38,plus,GTACAGGAGGTTCTAGGGTA NGG,NA,NA,,NA,NA,28 12 20 40,40,0,57.7005,NA,ENSG00000263231::RP11-263K19.8,783,806,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0.136046086484631,0.2489821228,,-485,-462
+rs76763715,23,15,38,plus,GTACAGGAGGTTCTAGGGTA NGG,NA,NA,,NA,NA,28 12 20 40,40,0,57.7005,NA,ENSG00000262446::GBA,1385,1408,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0.136046086484631,0.2489821228,,-485,-462
+rs76763715,23,15,38,plus,GTACAGGAGGTTCTAGGGTA NGG,NA,NA,,NA,NA,28 12 20 40,40,0,57.7005,NA,ENSG00000177628::GBA,1381,1404,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0.136046086484631,0.2489821228,,-485,-462
+rs8050588,23,4,27,plus,GCCCAGCACACAGTAGGGAT NGG,NA,NA,,NA,NA,24 28 8 40,100,0,62.4048,NA,ENSG00000099364::FBXL19,3402,3425,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.161121058558899,0.3591238684,,-496,-473
+rs117618017,23,22,45,minus,GATGATACGCAACGGCTCGG NGG,NA,NA,,NA,NA,16 36 28 20,100,0,70.4292,NA,ENSG00000138613::APH1B,1682,1705,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0.36129365254088,0.3601701892,,-478,-455
+rs117618017,23,25,48,minus,GAAGATGATACGCAACGGCT NGG,NA,NA,,NA,NA,12 36 32 20,100,0,61.2534,NA,ENSG00000138613::APH1B,1685,1708,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0,0.362672256,,-475,-452
+rs117618017,23,1,24,minus,GGCGATGGTGAAGACATAAA NGG,NA,NA,,NA,NA,16 44 32 8,100,0,48,NA,ENSG00000138613::APH1B,1661,1684,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.4,0,0,,-499,-476
+rs1724425,23,25,48,minus,GAGGGATTTGTCTGGAAGAG NGG,NA,NA,,NA,NA,28 44 24 4,80,0,53.2594,NA,ENSG00000282456::RP11-105N13.4,82490,82513,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.5,0,0.1629711892,,-475,-452
+rs1724425,23,25,48,minus,GAGGGATTTGTCTGGAAGAG NGG,NA,NA,,NA,NA,28 44 24 4,80,0,53.2594,NA,ENSG00000263715::RP11-105N13.4,82473,82496,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.5,0,0.1629711892,,-475,-452
+rs80257887,23,20,43,plus,GGGTTGGGATTCAACAGCTG NGG,NA,NA,,NA,NA,20 16 24 40,100,0,61.3947,NA,ENSG00000273777::CEACAM20,15116,15139,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.208564977409522,0.3611721996,,-480,-457
+rs3764645,23,17,40,plus,GGCCGCTGAGGACCTGGCCC NGG,NA,NA,,NA,NA,16 32 8 44,100,0,62.2503,NA,ENSG00000064687::ABCA7,2701,2724,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.0712560940785664,0.24126115,,-483,-460
+rs3764645,23,11,34,plus,GTTGGAGGCCGCTGAGGACC NGG,NA,NA,,NA,NA,12 28 16 44,100,0,58.3976,NA,ENSG00000064687::ABCA7,2695,2718,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.0280089915620076,0.291873136,,-489,-466
+rs3764645,23,27,50,plus,GACCTGGCCCAGGAGGTACG NGG,NA,NA,,NA,NA,21 26 8 43,100,0,52,NA,ENSG00000064687::ABCA7,2711,2734,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0,0,,-473,-450
+rs713522,23,15,38,minus,GCACATTTAGTGCTGGGGGC NGG,NA,NA,,NA,NA,24 44 16 16,68.6956,0,62.8431,NA,ENSG00000186868::MAPT,93502,93525,MMMMMMMMMMMMMMMMMMMMMMM,0,3,fw,0,0,0.8,0.10201619916158,0.2401389112,,-485,-462
+rs713522,23,15,38,minus,GCACATTTAGTGCTGGGGGC NGG,NA,NA,,NA,NA,24 44 16 16,68.6956,0,62.8431,NA,ENSG00000276155::MAPT,40189,40212,MMMMMMMMMXMMMMMMMMMMMMM,1,3,rc,0,0,0.8,0.10201619916158,0.2401389112,,-485,-462
+rs713522,23,15,38,minus,GCACATTTAGTGCTGGGGGC NGG,NA,NA,,NA,NA,24 44 16 16,68.6956,0,62.8431,NA,ENSG00000277956::MAPT,93490,93513,MMMMMMMMMMMMMXMMMMMMMMM,1,3,fw,0,0,0.8,0.10201619916158,0.2401389112,,-485,-462
+rs3935637,23,21,44,plus,GGGAGGATCAGCTTGACCCC NGG,NA,NA,,NA,NA,24 24 12 40,100,0,56.5168,NA,ENSG00000167693::NXN,137661,137684,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.225840765718754,0,,-479,-456
+rs72973584,23,9,32,plus,GGGGATCGTTTGATCCCGGG NGG,NA,NA,,NA,NA,12 20 24 44,100,0,74.4282,NA,ENSG00000064687::ABCA7,5960,5983,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.580829085415646,0.4405840032,,-491,-468
+rs3098199,23,25,48,minus,GATCAATAAAGATTTCCTGA NGG,NA,NA,,NA,NA,28 20 40 12,100,0,54.928,NA,ENSG00000170236::USP50,28499,28522,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.4,0,0.3464043168,,-475,-452
+rs35385129,23,15,38,minus,GTGCTCAATTACGGCAGCTC NGG,NA,NA,,NA,NA,24 32 20 24,100,0,55.3385,NA,ENSG00000073008::PVR,15113,15136,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.0315425215290866,0.0353848016,,-485,-462
+rs3935637,23,6,29,minus,GCTGCTGTGTAGTGGAGAAA NGG,NA,NA,,NA,NA,20 44 24 12,0,0,60.0272,NA,ENSG00000262905::RP5-1029F21.2,303,326,MMMMMMMMMMMMMMMMMMMMMMM,0,8,fw,0,0,0.5,0.501363594869377,0,,-494,-471
+rs3935637,23,6,29,minus,GCTGCTGTGTAGTGGAGAAA NGG,NA,NA,,NA,NA,20 44 24 12,0,0,60.0272,NA,ENSG00000262905::RP5-1029F21.2,758,781,MMMMMMMMMMMMMMMMMMMMMMM,0,8,fw,0,0,0.5,0.501363594869377,0,,-494,-471
+rs3935637,23,6,29,minus,GCTGCTGTGTAGTGGAGAAA NGG,NA,NA,,NA,NA,20 44 24 12,0,0,60.0272,NA,ENSG00000262905::RP5-1029F21.2,498,521,MMMMMMMMMMMMMMMMMMMMMMM,0,8,fw,0,0,0.5,0.501363594869377,0,,-494,-471
+rs3935637,23,6,29,minus,GCTGCTGTGTAGTGGAGAAA NGG,NA,NA,,NA,NA,20 44 24 12,0,0,60.0272,NA,ENSG00000262905::RP5-1029F21.2,693,716,MMMMMMMMMMMMMMMMMMMMMMM,0,8,fw,0,0,0.5,0.501363594869377,0,,-494,-471
+rs3935637,23,6,29,minus,GCTGCTGTGTAGTGGAGAAA NGG,NA,NA,,NA,NA,20 44 24 12,0,0,60.0272,NA,ENSG00000262905::RP5-1029F21.2,563,586,MMMMMMMMMMMMMMMMMMMMMMM,0,8,fw,0,0,0.5,0.501363594869377,0,,-494,-471
+rs3935637,23,6,29,minus,GCTGCTGTGTAGTGGAGAAA NGG,NA,NA,,NA,NA,20 44 24 12,0,0,60.0272,NA,ENSG00000262905::RP5-1029F21.2,433,456,MMMMMMMMMMMMMMMMMMMMMMM,0,8,fw,0,0,0.5,0.501363594869377,0,,-494,-471
+rs3935637,23,6,29,minus,GCTGCTGTGTAGTGGAGAAA NGG,NA,NA,,NA,NA,20 44 24 12,0,0,60.0272,NA,ENSG00000262905::RP5-1029F21.2,628,651,MMMMMMMMMMMMMMMMMMMMMMM,0,8,fw,0,0,0.5,0.501363594869377,0,,-494,-471
+rs3935637,23,6,29,minus,GCTGCTGTGTAGTGGAGAAA NGG,NA,NA,,NA,NA,20 44 24 12,0,0,60.0272,NA,ENSG00000262905::RP5-1029F21.2,368,391,MMMMMMMMMMMMMMMMMMMMMMM,0,8,fw,0,0,0.5,0.501363594869377,0,,-494,-471
+rs34186148,23,23,46,plus,GCGCTTTCTAGCTCTAAAGT NGG,NA,NA,,NA,NA,20 20 32 28,68.6956,0,55.3373,NA,ENSG00000263715::RP11-105N13.4,155379,155402,MMMMMMMMMMMMMMMMMMMMMMM,0,3,fw,0,0,0.4,0.366866071154999,0,,-477,-454
+rs34186148,23,23,46,plus,GCGCTTTCTAGCTCTAAAGT NGG,NA,NA,,NA,NA,20 20 32 28,68.6956,0,55.3373,NA,ENSG00000282456::RP11-105N13.4,155365,155388,MMXMMMMMMMMMMMMMMMMMMMM,1,3,fw,0,0,0.4,0.366866071154999,0,,-477,-454
+rs34186148,23,23,46,plus,GCGCTTTCTAGCTCTAAAGT NGG,NA,NA,,NA,NA,20 20 32 28,68.6956,0,55.3373,NA,CHR_HSCHR17_1_CTG5,46320407,46320430,MMMMMMMMMMMMMMMMMMMMXMM,1,3,rc,0,0,0.4,0.366866071154999,0,,-477,-454
+rs4588066,23,4,27,plus,GTATATTCTTATATGTAAGC NGG,NA,NA,,NA,NA,28 8 40 24,100,0,57.7038,NA,ENSG00000152214::RIT2,349751,349774,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0.216499664706095,0.2686923124,,-496,-473
+rs34186148,23,15,38,plus,GTGTCAGGATGGGTCGGGGG NGG,NA,NA,,NA,NA,16 8 20 56,60,0,68.1828,NA,ENSG00000159842::ABR,7399,7422,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.8,0.120611612138257,0.4885323484,,-485,-462
+rs34186148,23,15,38,plus,GTGTCAGGATGGGTCGGGGG NGG,NA,NA,,NA,NA,16 8 20 56,60,0,68.1828,NA,ENSG00000278741::ABR,7398,7421,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.8,0.120611612138257,0.4885323484,,-485,-462
+rs34186148,23,15,38,plus,GTGTCAGGATGGGTCGGGGG NGG,NA,NA,,NA,NA,16 8 20 56,60,0,68.1828,NA,ENSG00000276016::ABR,7398,7421,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.8,0.120611612138257,0.4885323484,,-485,-462
+rs34186148,23,12,35,plus,GCTGTGTCAGGATGGGTCGG NGG,NA,NA,,NA,NA,8 12 24 56,60,0,67.127,NA,ENSG00000159842::ABR,7402,7425,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.8,0.161035011700619,0.395316114,,-488,-465
+rs34186148,23,12,35,plus,GCTGTGTCAGGATGGGTCGG NGG,NA,NA,,NA,NA,8 12 24 56,60,0,67.127,NA,ENSG00000278741::ABR,7401,7424,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.8,0.161035011700619,0.395316114,,-488,-465
+rs34186148,23,12,35,plus,GCTGTGTCAGGATGGGTCGG NGG,NA,NA,,NA,NA,8 12 24 56,60,0,67.127,NA,ENSG00000276016::ABR,7401,7424,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.8,0.161035011700619,0.395316114,,-488,-465
+rs34186148,23,11,34,plus,GGCTGTGTCAGGATGGGTCG NGG,NA,NA,,NA,NA,8 12 24 56,60,0,66.093,NA,ENSG00000278741::ABR,7402,7425,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.180778952897849,0.4238741632,,-489,-466
+rs34186148,23,11,34,plus,GGCTGTGTCAGGATGGGTCG NGG,NA,NA,,NA,NA,8 12 24 56,60,0,66.093,NA,ENSG00000276016::ABR,7402,7425,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.180778952897849,0.4238741632,,-489,-466
+rs34186148,23,11,34,plus,GGCTGTGTCAGGATGGGTCG NGG,NA,NA,,NA,NA,8 12 24 56,60,0,66.093,NA,ENSG00000159842::ABR,7403,7426,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.180778952897849,0.4238741632,,-489,-466
+rs34186148,23,22,45,plus,GATGGGTCGGGGGTGGAACG NGG,NA,NA,,NA,NA,12 12 16 60,60,0,63.0873,NA,ENSG00000276016::ABR,7391,7414,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.454367036206098,0,,-478,-455
+rs34186148,23,22,45,plus,GATGGGTCGGGGGTGGAACG NGG,NA,NA,,NA,NA,12 12 16 60,60,0,63.0873,NA,ENSG00000159842::ABR,7392,7415,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.454367036206098,0,,-478,-455
+rs34186148,23,22,45,plus,GATGGGTCGGGGGTGGAACG NGG,NA,NA,,NA,NA,12 12 16 60,60,0,63.0873,NA,ENSG00000278741::ABR,7391,7414,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.454367036206098,0,,-478,-455
+rs34186148,23,5,28,plus,GGTGGGGGCTGTGTCAGGAT NGG,NA,NA,,NA,NA,8 12 24 56,60,0,62.071,NA,ENSG00000276016::ABR,7408,7431,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.6,0.133499062355424,0.3700529976,,-495,-472
+rs34186148,23,5,28,plus,GGTGGGGGCTGTGTCAGGAT NGG,NA,NA,,NA,NA,8 12 24 56,60,0,62.071,NA,ENSG00000159842::ABR,7409,7432,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.6,0.133499062355424,0.3700529976,,-495,-472
+rs34186148,23,5,28,plus,GGTGGGGGCTGTGTCAGGAT NGG,NA,NA,,NA,NA,8 12 24 56,60,0,62.071,NA,ENSG00000278741::ABR,7408,7431,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.6,0.133499062355424,0.3700529976,,-495,-472
+rs34186148,23,9,32,plus,GGGGCTGTGTCAGGATGGGT NGG,NA,NA,,NA,NA,8 12 20 60,60,0,60.6316,NA,ENSG00000276016::ABR,7404,7427,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.0303929115045477,0.3011871908,,-491,-468
+rs34186148,23,9,32,plus,GGGGCTGTGTCAGGATGGGT NGG,NA,NA,,NA,NA,8 12 20 60,60,0,60.6316,NA,ENSG00000159842::ABR,7405,7428,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.0303929115045477,0.3011871908,,-491,-468
+rs34186148,23,9,32,plus,GGGGCTGTGTCAGGATGGGT NGG,NA,NA,,NA,NA,8 12 20 60,60,0,60.6316,NA,ENSG00000278741::ABR,7404,7427,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.0303929115045477,0.3011871908,,-491,-468
+rs34186148,23,10,33,plus,GGGCTGTGTCAGGATGGGTC NGG,NA,NA,,NA,NA,8 12 20 60,60,0,56.5714,NA,ENSG00000159842::ABR,7404,7427,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.0322471876105616,0.0963250804,,-490,-467
+rs34186148,23,10,33,plus,GGGCTGTGTCAGGATGGGTC NGG,NA,NA,,NA,NA,8 12 20 60,60,0,56.5714,NA,ENSG00000278741::ABR,7403,7426,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.0322471876105616,0.0963250804,,-490,-467
+rs34186148,23,10,33,plus,GGGCTGTGTCAGGATGGGTC NGG,NA,NA,,NA,NA,8 12 20 60,60,0,56.5714,NA,ENSG00000276016::ABR,7403,7426,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.0322471876105616,0.0963250804,,-490,-467
+rs34186148,23,21,44,plus,GGATGGGTCGGGGGTGGAAC NGG,NA,NA,,NA,NA,12 12 12 64,60,0,55.373,NA,ENSG00000159842::ABR,7393,7416,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.0686507582518122,0,,-479,-456
+rs34186148,23,21,44,plus,GGATGGGTCGGGGGTGGAAC NGG,NA,NA,,NA,NA,12 12 12 64,60,0,55.373,NA,ENSG00000278741::ABR,7392,7415,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.0686507582518122,0,,-479,-456
+rs34186148,23,21,44,plus,GGATGGGTCGGGGGTGGAAC NGG,NA,NA,,NA,NA,12 12 12 64,60,0,55.373,NA,ENSG00000276016::ABR,7392,7415,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.0686507582518122,0,,-479,-456
+rs34186148,23,4,27,plus,GGGTGGGGGCTGTGTCAGGA NGG,NA,NA,,NA,NA,8 8 24 60,60,0,53.9999,NA,ENSG00000159842::ABR,7410,7433,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.5,0.0181943819756773,0.1818051352,,-496,-473
+rs34186148,23,4,27,plus,GGGTGGGGGCTGTGTCAGGA NGG,NA,NA,,NA,NA,8 8 24 60,60,0,53.9999,NA,ENSG00000278741::ABR,7409,7432,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.5,0.0181943819756773,0.1818051352,,-496,-473
+rs34186148,23,4,27,plus,GGGTGGGGGCTGTGTCAGGA NGG,NA,NA,,NA,NA,8 8 24 60,60,0,53.9999,NA,ENSG00000276016::ABR,7409,7432,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.5,0.0181943819756773,0.1818051352,,-496,-473
+rs34186148,23,0,23,plus,GAGTGGGTGGGGGCTGTGTC NGG,NA,NA,,NA,NA,12 8 24 56,60,0,51.8401,NA,ENSG00000159842::ABR,7414,7437,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.6,0,-0.00799230199999998,,-500,-477
+rs34186148,23,0,23,plus,GAGTGGGTGGGGGCTGTGTC NGG,NA,NA,,NA,NA,12 8 24 56,60,0,51.8401,NA,ENSG00000278741::ABR,7413,7436,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.6,0,-0.00799230199999998,,-500,-477
+rs34186148,23,0,23,plus,GAGTGGGTGGGGGCTGTGTC NGG,NA,NA,,NA,NA,12 8 24 56,60,0,51.8401,NA,ENSG00000276016::ABR,7413,7436,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.6,0,-0.00799230199999998,,-500,-477
+rs12917722,23,24,47,plus,GATGGTAATGTTGACCTCCT NGG,NA,NA,,NA,NA,20 20 28 32,100,0,52.739,NA,ENSG00000099364::FBXL19,14020,14043,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.0369512796518701,0,,-476,-453
+rs9898399,23,19,42,plus,GGTCTTTGCAAGGCAAATGA NGG,NA,NA,,NA,NA,28 20 20 32,100,0,71.8796,NA,ENSG00000141252::VPS53,66409,66432,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.616659926791601,0.4773243496,,-481,-458
+rs9898399,23,9,32,plus,GGCACTACTGGGTCTTTGCA NGG,NA,NA,,NA,NA,20 24 24 32,100,0,53.0564,NA,ENSG00000141252::VPS53,66399,66422,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0.166176321220749,0.0866468996,,-491,-468
+rs1141534,23,18,41,minus,GGGCCTCACCTTCCCCGCCA NGG,NA,NA,,NA,NA,16 28 8 48,100,0,51.3245,NA,ENSG00000064666::CNN2,6102,6125,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.9,0.325344840940726,0.3408817976,,-482,-459
+rs75161053,23,5,28,plus,GCTGACCTGCATTACACCCA NGG,NA,NA,,NA,NA,20 32 20 28,100,0,74.4758,NA,ENSG00000230666::CEACAM22P,7785,7808,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.770131108199283,0.353661906,,-495,-472
+rs75161053,23,21,44,minus,GCTGTGTGGGAGATCACCCT NGG,NA,NA,,NA,NA,20 40 16 24,100,0,64.6164,NA,ENSG00000230666::CEACAM22P,7801,7824,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.28815762254495,0.3426668376,,-479,-456
+rs75161053,23,10,33,minus,GATCACCCTGGGTGTAATGC NGG,NA,NA,,NA,NA,20 36 24 20,100,0,52.746,NA,ENSG00000230666::CEACAM22P,7790,7813,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.4,0.0741742277563668,0.163129664,,-490,-467
+rs916888,23,9,32,minus,GGAGGAGCTGGGCTGCACCT NGG,NA,NA,,NA,NA,12 52 12 24,80,0,74.5292,NA,CHR_HSCHR17_2_CTG2,1207941,1207964,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.7,0.625470961961068,0.4009902464,,-491,-468
+rs916888,23,9,32,minus,GGAGGAGCTGGGCTGCACCT NGG,NA,NA,,NA,NA,12 52 12 24,80,0,74.5292,NA,17,1305162,1305185,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.7,0.625470961961068,0.4009902464,,-491,-468
+rs916888,23,20,43,minus,GGGCGAGGCGGGGAGGAGCT NGG,NA,NA,,NA,NA,4 68 16 12,64.3478,0,59.962,NA,17,1305173,1305196,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.0527420438789398,0.2453629084,,-480,-457
+rs916888,23,20,43,minus,GGGCGAGGCGGGGAGGAGCT NGG,NA,NA,,NA,NA,4 68 16 12,64.3478,0,59.962,NA,CHR_HSCHR17_2_CTG2,1207952,1207975,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.0527420438789398,0.2453629084,,-480,-457
+rs916888,23,20,43,minus,GGGCGAGGCGGGGAGGAGCT NGG,NA,NA,,NA,NA,4 68 16 12,64.3478,0,59.962,NA,ENSG00000107331::ABCA2,4993,5016,MMMMMMMMMMMMMMMMMXMMMMM,1,3,rc,0,0,0.7,0.0527420438789398,0.2453629084,,-480,-457
+rs916888,23,21,44,minus,GGGGCGAGGCGGGGAGGAGC NGG,NA,NA,,NA,NA,4 68 16 12,64.3478,0,59.9028,NA,17,1305174,1305197,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.00166715711689214,0.2934736836,,-479,-456
+rs916888,23,21,44,minus,GGGGCGAGGCGGGGAGGAGC NGG,NA,NA,,NA,NA,4 68 16 12,64.3478,0,59.9028,NA,CHR_HSCHR17_2_CTG2,1207953,1207976,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0.00166715711689214,0.2934736836,,-479,-456
+rs916888,23,21,44,minus,GGGGCGAGGCGGGGAGGAGC NGG,NA,NA,,NA,NA,4 68 16 12,64.3478,0,59.9028,NA,ENSG00000107331::ABCA2,4994,5017,MMMMMMMMMMMMMMMMXMMMMMM,1,3,rc,0,0,0.7,0.00166715711689214,0.2934736836,,-479,-456
+rs61572747,23,15,38,plus,GGAGGAGGGGAGCCTGAGGG NGG,NA,NA,,NA,NA,24 8 4 64,64.3478,0,67.2333,NA,CHR_HSCHR17_2_CTG5,45383515,45383538,MMMMMMMMMMMMMMMMMMMMMMM,0,3,fw,0,0,0.7,0.118523425114837,0.5431436532,,-485,-462
+rs61572747,23,15,38,plus,GGAGGAGGGGAGCCTGAGGG NGG,NA,NA,,NA,NA,24 8 4 64,64.3478,0,67.2333,NA,17,45383515,45383538,MMMMMMMMMMMMMMMMMMMMMMM,0,3,fw,0,0,0.7,0.118523425114837,0.5431436532,,-485,-462
+rs61572747,23,15,38,plus,GGAGGAGGGGAGCCTGAGGG NGG,NA,NA,,NA,NA,24 8 4 64,64.3478,0,67.2333,NA,CHR_HSCHR17_1_CTG5,45383517,45383540,MMMMMMMMMMXMMMMMMMMMMMM,1,3,fw,0,0,0.7,0.118523425114837,0.5431436532,,-485,-462
+rs61572747,23,12,35,plus,GGCGGAGGAGGGGAGCCTGA NGG,NA,NA,,NA,NA,20 12 4 64,64.3478,0,66.6414,NA,CHR_HSCHR17_2_CTG5,45383512,45383535,MMMMMMMMMMMMMMMMMMMMMMM,0,3,fw,0,0,0.7,0.337427794534421,0.29464667,,-488,-465
+rs61572747,23,12,35,plus,GGCGGAGGAGGGGAGCCTGA NGG,NA,NA,,NA,NA,20 12 4 64,64.3478,0,66.6414,NA,17,45383512,45383535,MMMMMMMMMMMMMMMMMMMMMMM,0,3,fw,0,0,0.7,0.337427794534421,0.29464667,,-488,-465
+rs61572747,23,12,35,plus,GGCGGAGGAGGGGAGCCTGA NGG,NA,NA,,NA,NA,20 12 4 64,64.3478,0,66.6414,NA,CHR_HSCHR17_1_CTG5,45383514,45383537,MMMMMMMMMMMMMXMMMMMMMMM,1,3,fw,0,0,0.7,0.337427794534421,0.29464667,,-488,-465
+rs61572747,23,26,49,plus,GCCTGAGGGAGGAGCAGTTG NGG,NA,NA,,NA,NA,25 12 12 50,44.3478,0,50,NA,CHR_HSCHR17_1_CTG5,45383528,45383551,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0,0,,-474,-451
+rs61572747,23,26,49,plus,GCCTGAGGGAGGAGCAGTTG NGG,NA,NA,,NA,NA,25 12 12 50,44.3478,0,50,NA,CHR_HSCHR17_2_CTG5,45383526,45383549,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0,0,,-474,-451
+rs61572747,23,26,49,plus,GCCTGAGGGAGGAGCAGTTG NGG,NA,NA,,NA,NA,25 12 12 50,44.3478,0,50,NA,17,45383526,45383549,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0,0,,-474,-451
+rs61572747,23,26,49,plus,GCCTGAGGGAGGAGCAGTTG NGG,NA,NA,,NA,NA,25 12 12 50,44.3478,0,50,NA,ENSG00000149260::CAPN5,52549,52572,MMMMXMMMMMMMMMMMMMMMMMM,1,4,rc,0,0,0.5,0,0,,-474,-451
+rs203709,23,10,33,minus,GGTTACAAGGTTGGAGCCCC NGG,NA,NA,,NA,NA,24 40 16 20,100,0,58.5067,NA,ENSG00000073008::PVR,14485,14508,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0.0529600304098145,0.072378826,,-490,-467
+rs203709,23,14,37,plus,GGGCTCCAACCTTGTAACCC NGG,NA,NA,,NA,NA,28 32 16 24,100,0,54.5211,NA,ENSG00000073008::PVR,14489,14512,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.054493509956644,0.1715615016,,-486,-463
+rs916888,23,7,30,plus,GCTGCAGGAGACGGTGGGAG NGG,NA,NA,,NA,NA,20 16 8 56,100,0,76.607,NA,ENSG00000132386::SERPINF1,9676,9699,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.573904765171749,0.4564458164,,-493,-470
+rs916888,23,16,39,plus,GACGGTGGGAGGGGCAGGGA NGG,NA,NA,,NA,NA,20 12 4 64,100,0,65.3728,NA,ENSG00000132386::SERPINF1,9685,9708,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.038616322302757,0.4300273404,,-484,-461
+rs916888,23,5,28,plus,GGGCTGCAGGAGACGGTGGG NGG,NA,NA,,NA,NA,16 12 8 64,100,0,62.7739,NA,ENSG00000132386::SERPINF1,9674,9697,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.0893185553965849,0.3493805216,,-495,-472
+rs916888,23,6,29,plus,GGCTGCAGGAGACGGTGGGA NGG,NA,NA,,NA,NA,16 16 8 60,100,0,62.7472,NA,ENSG00000132386::SERPINF1,9675,9698,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.0119884928149202,0.3253738944,,-494,-471
+rs3752231,23,8,31,plus,GGAGGATCAGAGGCACACGC NGG,NA,NA,,NA,NA,32 20 4 44,100,0,75.4082,NA,ENSG00000064687::ABCA7,3521,3544,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.596603503270651,0.4738087704,,-492,-469
+rs183427010,23,25,48,plus,GGGCTGCTCACTTTGAGTTC NGG,NA,NA,,NA,NA,16 20 28 36,100,0,48,NA,ENSG00000130202::PVRL2,17066,17089,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0,0,,-475,-452
+rs2965163,23,23,46,minus,GCACATGGAGTGTTCCGTGC NGG,NA,NA,,NA,NA,20 40 16 24,100,0,62.4828,NA,ENSG00000266903::CTB-171A8.1,65055,65078,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.227349452709533,0.1967925856,,-477,-454
+rs2965163,23,0,23,minus,GCCTGCCTCAGAGCACGTAC NGG,NA,NA,,NA,NA,16 36 16 32,100,0,52,NA,ENSG00000266903::CTB-171A8.1,65032,65055,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0,0,,-500,-477
+rs2965163,23,9,32,plus,GCTCTGAGGCAGGCCCGGCA NGG,NA,NA,,NA,NA,20 32 8 40,100,0,46.5615,NA,ENSG00000266903::CTB-171A8.1,65041,65064,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.9,0.132615434078859,0.2954599656,,-491,-468
+rs12978931,23,6,29,plus,GATCACTTCGGCCCCAGAGA NGG,NA,NA,,NA,NA,20 32 20 28,100,0,70.5747,NA,ENSG00000130202::PVRL2,14249,14272,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.456695814471521,0.3720424712,,-494,-471
+rs12978931,23,18,41,minus,GCTCACTGCAAACCGTCTCT NGG,NA,NA,,NA,NA,24 24 16 36,100,0,58.967,NA,ENSG00000130202::PVRL2,14261,14284,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.111989044464639,0.1363645676,,-482,-459
+rs150820726,23,17,40,plus,GCTGCCACATGCAGGGTGAA NGG,NA,NA,,NA,NA,28 20 16 36,100,0,53.559,NA,19,44723883,44723906,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.224981699200439,-0.0470277276,,-483,-460
+rs2965102,23,2,25,minus,GTTCCATCCTGTGCAAAGGG NGG,NA,NA,,NA,NA,20 36 24 20,100,0,52,NA,19,44732689,44732712,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0,0,,-498,-475
+rs10419669,23,7,30,minus,GCCCCGAGGTAGGACACATC NGG,NA,NA,,NA,NA,12 36 24 28,100,0,50.6065,NA,ENSG00000142273::CBLC,16925,16948,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.00485333433251994,0.0254758456,,-493,-470
+rs2965162,23,25,48,minus,GTCCTGTCCTCTCTGGGCAG NGG,NA,NA,,NA,NA,32 36 4 28,100,0,65.4822,NA,ENSG00000266903::CTB-171A8.1,63467,63490,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0,0.4741106164,,-475,-452
+rs2965162,23,20,43,minus,GTCCTCTCTGGGCAGGGGTG NGG,NA,NA,,NA,NA,24 48 4 24,100,0,60.9587,NA,ENSG00000266903::CTB-171A8.1,63462,63485,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0.0579875699226807,0.1899519944,,-480,-457
+rs2965162,23,3,26,minus,GTGGGGAGGCCTTGAGACTG NGG,NA,NA,,NA,NA,16 56 16 12,100,0,50.1192,NA,ENSG00000266903::CTB-171A8.1,63445,63468,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.00596123630669819,0,,-497,-474
+rs140414737,23,18,41,minus,GTTACCACCTCCCTTGGGAA NGG,NA,NA,,NA,NA,20 28 20 32,100,0,68.0076,NA,19,44770808,44770831,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.574529989976115,0.2258509304,,-482,-459
+rs140414737,23,7,30,plus,GCCGAGAAACTCCGTTCCCA NGG,NA,NA,,NA,NA,28 32 12 28,100,0,56.6444,NA,19,44770797,44770820,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.0460901766388553,0.186130366,,-493,-470
+rs28399637,23,7,30,plus,GGGCAGTGGAGCACGCCCGT NGG,NA,NA,,NA,NA,16 28 8 48,100,0,67.3823,NA,ENSG00000187244::BCAM,11804,11827,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.122675273722466,0.446440726,,-493,-470
+rs28399637,23,23,46,minus,GAGAGGTCAGCCTGTGCCCA NGG,NA,NA,,NA,NA,16 40 16 28,100,0,59.8789,NA,ENSG00000187244::BCAM,11820,11843,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.0827240776974709,0.2112253112,,-477,-454
+rs28399637,23,1,24,minus,GGCGTGCTCCACTGCCCAGC NGG,NA,NA,,NA,NA,12 36 12 40,100,0,54,NA,ENSG00000187244::BCAM,11798,11821,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0,0,,-499,-476
+rs2289495,23,15,38,minus,GGGAAGGGGTCCAGCAGCCG NGG,NA,NA,,NA,NA,8 48 20 24,100,0,66.2878,NA,ENSG00000186567::CEACAM19,21742,21765,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.148832267405377,0.4655592656,,-485,-462
+rs2289495,23,23,46,plus,GCTGGACCCCTTCCCTGTTC NGG,NA,NA,,NA,NA,12 40 24 24,100,0,53.3901,NA,ENSG00000186567::CEACAM19,21750,21773,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.0695077133961883,0,,-477,-454
+rs2289495,23,2,25,minus,GCAGCCGTGGTCACCTTGCT NGG,NA,NA,,NA,NA,20 36 12 32,100,0,52,NA,ENSG00000186567::CEACAM19,21729,21752,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0,0,,-498,-475
+rs2289495,23,27,50,plus,GACCCCTTCCCTGTTCAGGC NGG,NA,NA,,NA,NA,13 39 21 26,100,0,52,NA,ENSG00000186567::CEACAM19,21754,21777,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0,0,,-473,-450
+rs41289512,23,3,26,minus,GGCTCAGGGTCTGGTGGGTT NGG,NA,NA,,NA,NA,28 48 8 16,100,0,54.0819,NA,ENSG00000130202::PVRL2,2062,2085,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.00409968902467368,0,,-497,-474
+rs55840414,23,23,46,plus,GCGAACATAGCCAGGCGTCG NGG,NA,NA,,NA,NA,20 32 12 36,100,0,60.7739,NA,19,44840320,44840343,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.338699557603025,0,,-477,-454
+rs12459810,23,13,36,minus,GGGTGGAGGCGAGGTTTGGA NGG,NA,NA,,NA,NA,16 64 16 4,100,0,58.0166,NA,19,44746392,44746415,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.124041134305347,0.1767905056,,-487,-464
+rs2965169,23,8,31,plus,GATTGTGTCTCTGCACTCGT NGG,NA,NA,,NA,NA,8 20 36 36,100,0,62.5096,NA,ENSG00000069399::BCL3,188,211,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.283486908416462,0.2419934176,,-492,-469
+rs2965169,23,3,26,minus,GAGTGCAGAGACACAATCAG NGG,NA,NA,,NA,NA,12 32 36 20,100,0,60.7841,NA,ENSG00000069399::BCL3,193,216,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0.639206009500925,0,,-497,-474
+rs1135062,23,15,38,minus,GTCACTCACCGGTGCCGAAG NGG,NA,NA,,NA,NA,16 32 20 32,100,0,56.8461,NA,ENSG00000187244::BCAM,10418,10441,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.0516647919005332,0.1906429232,,-485,-462
+rs1135062,23,23,46,plus,GCACCGGTGAGTGACTGAGG NGG,NA,NA,,NA,NA,16 16 20 48,100,0,56.7261,NA,ENSG00000187244::BCAM,10426,10449,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.236306386386413,0,,-477,-454
+rs10401176,23,26,49,plus,GTCTGTGTGATGGGTTGGTA NGG,NA,NA,,NA,NA,12 4 37 45,100,0,50,NA,ENSG00000069399::BCL3,2530,2553,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0,0,,-474,-451
+rs2965109,23,20,43,minus,GCGAGGGACAAGAAGAGTCA NGG,NA,NA,,NA,NA,4 44 40 12,100,0,61.9494,NA,19,44722063,44722086,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.241349304195245,0.3561231504,,-480,-457
+rs7255063,23,12,35,plus,GTCAGAGACACGTGTAGGAA NGG,NA,NA,,NA,NA,36 12 16 36,100,0,53.2704,NA,ENSG00000130202::PVRL2,2974,2997,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0.0485818419852448,0.2149428724,,-488,-465
+rs111780744,23,5,28,minus,GCGTCTTGCTTCCATGCCTC NGG,NA,NA,,NA,NA,36 24 8 32,100,0,54.5488,NA,ENSG00000186567::CEACAM19,1386,1409,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.127442592296763,0,,-495,-472
+rs111780744,23,26,49,plus,GCTAAATGAAGAGGGCCATA NGG,NA,NA,,NA,NA,37 12 12 37,100,0,52,NA,ENSG00000186567::CEACAM19,1407,1430,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0,0,,-474,-451
+rs140824606,23,23,46,plus,GCGCCCACTGCATTCCCGGC NGG,NA,NA,,NA,NA,8 44 16 32,100,0,56.6893,NA,19,44807825,44807848,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.134466498071594,0,,-477,-454
+rs140824606,23,19,42,plus,GATTGCGCCCACTGCATTCC NGG,NA,NA,,NA,NA,12 40 24 24,100,0,53.9505,NA,19,44807821,44807844,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.0335787182090226,0.0639472336,,-481,-458
+rs72654437,23,25,48,plus,GGGTCTGGGAAGCAGACATC NGG,NA,NA,,NA,NA,20 16 20 44,100,0,50,NA,ENSG00000280087::CTB-129P6.7,3467,3490,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0,0,,-475,-452
+rs72654437,23,26,49,plus,GGTCTGGGAAGCAGACATCT NGG,NA,NA,,NA,NA,20 16 20 41,84.3478,0,50,NA,ENSG00000280087::CTB-129P6.7,3468,3491,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.5,0,0,,-474,-451
+rs72654437,23,26,49,plus,GGTCTGGGAAGCAGACATCT NGG,NA,NA,,NA,NA,20 16 20 41,84.3478,0,50,NA,10,29963898,29963921,MMMMMMMMMMMMMMMMMMMXMMM,1,2,rc,0,0,0.5,0,0,,-474,-451
+rs72654437,23,3,26,plus,GCATTGTTATGCTATTCTTG NGG,NA,NA,,NA,NA,12 12 44 32,84.3478,0,48.4155,NA,ENSG00000280087::CTB-129P6.7,3445,3468,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.3,0,0.1207762136,,-497,-474
+rs72654437,23,3,26,plus,GCATTGTTATGCTATTCTTG NGG,NA,NA,,NA,NA,12 12 44 32,84.3478,0,48.4155,NA,19,44925375,44925398,MMMMMMMMMMXMMMMMMMMMMMM,1,2,fw,0,0,0.3,0,0.1207762136,,-497,-474
+rs76692773,23,16,39,plus,GGGCGATGCCTCAGCGGGCG NGG,NA,NA,,NA,NA,12 28 12 48,100,0,63.2242,NA,ENSG00000130204::TOMM40,376,399,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.120495414569638,0.2407153848,,-484,-461
+rs76692773,23,10,33,plus,GAGGCGGGGCGATGCCTCAG NGG,NA,NA,,NA,NA,12 28 8 52,100,0,60.6021,NA,ENSG00000130204::TOMM40,370,393,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.0239737067534347,0.30613464,,-490,-467
+rs76692773,23,2,25,minus,GCATCGCCCCGCCTCTCTCC NGG,NA,NA,,NA,NA,20 24 8 48,100,0,52,NA,ENSG00000130204::TOMM40,362,385,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0,0,,-498,-475
+rs117264457,23,0,23,minus,GTGGCCCCACCTGGACTTCC NGG,NA,NA,,NA,NA,16 28 20 36,100,0,52,NA,ENSG00000130204::TOMM40,10581,10604,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0,0,,-500,-477
+rs12691088,23,6,29,plus,GAAAGTGGGTAAGCTGGGTG NGG,NA,NA,,NA,NA,20 4 16 60,100,0,62.9743,NA,ENSG00000130208::APOC1,963,986,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.0196769851510562,0.3290400156,,-494,-471
+rs12691088,23,14,37,plus,GTAAGCTGGGTGGGGGGCTC NGG,NA,NA,,NA,NA,12 12 20 56,100,0,55.1637,NA,ENSG00000130208::APOC1,971,994,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.00729752558839351,-0.0491092196,,-486,-463
+rs12691088,23,1,24,plus,GCCTTGAAAGTGGGTAAGCT NGG,NA,NA,,NA,NA,20 12 24 44,100,0,52.2525,NA,ENSG00000130208::APOC1,958,981,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0,0.0126291632,,-499,-476
+rs117664574,23,7,30,minus,GGTCGAGTGGATGTTGGAGG NGG,NA,NA,,NA,NA,24 60 12 4,100,0,71.5306,NA,19,44924504,44924527,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.3835046273265,0.593028538,,-493,-470
+rs117664574,23,1,24,minus,GTGGATGTTGGAGGTGGCAT NGG,NA,NA,,NA,NA,24 56 16 4,100,0,54,NA,19,44924498,44924521,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0,0,,-499,-476
+rs769446,23,27,50,minus,GGGATGGGAGGGGCTGGGGG NGG,NA,NA,,NA,NA,8 73 8 8,0,0,49.233,NA,ENSG00000183889::NPIPA5,8952,8975,MMMMMMMMMMMMMMMMMMXMMMM,1,9,rc,0,0,0.9,0,0.5616535668,,-473,-450
+rs769446,23,27,50,minus,GGGATGGGAGGGGCTGGGGG NGG,NA,NA,,NA,NA,8 73 8 8,0,0,49.233,NA,ENSG00000282522::PKD1P1,16266,16289,MMMMMMMMMMMMMMMMMMXMMMM,1,9,rc,0,0,0.9,0,0.5616535668,,-473,-450
+rs769446,23,27,50,minus,GGGATGGGAGGGGCTGGGGG NGG,NA,NA,,NA,NA,8 73 8 8,0,0,49.233,NA,ENSG00000183458::RP11-958N24.1,16194,16217,MMMMMMMMMMMMMMMMMMXMMMM,1,9,rc,0,0,0.9,0,0.5616535668,,-473,-450
+rs769446,23,27,50,minus,GGGATGGGAGGGGCTGGGGG NGG,NA,NA,,NA,NA,8 73 8 8,0,0,49.233,NA,2,49304391,49304414,MMMMMMXMMMMMMMMMMMMMMMM,1,9,fw,0,0,0.9,0,0.5616535668,,-473,-450
+rs769446,23,27,50,minus,GGGATGGGAGGGGCTGGGGG NGG,NA,NA,,NA,NA,8 73 8 8,0,0,49.233,NA,ENSG00000205746::RP11-1212A22.1,7849,7872,MMMMXMMMMMMMMMMMMMMMMMM,1,9,fw,0,0,0.9,0,0.5616535668,,-473,-450
+rs769446,23,27,50,minus,GGGATGGGAGGGGCTGGGGG NGG,NA,NA,,NA,NA,8 73 8 8,0,0,49.233,NA,19,44905373,44905396,MMMMMMMMMMMMMMMMMMMMMMM,0,9,rc,0,0,0.9,0,0.5616535668,,-473,-450
+rs769446,23,27,50,minus,GGGATGGGAGGGGCTGGGGG NGG,NA,NA,,NA,NA,8 73 8 8,0,0,49.233,NA,ENSG00000186827::TNFRSF4,1272,1295,MMMMMMMMMMMMMMMMMMMXMMM,1,9,rc,0,0,0.9,0,0.5616535668,,-473,-450
+rs769446,23,27,50,minus,GGGATGGGAGGGGCTGGGGG NGG,NA,NA,,NA,NA,8 73 8 8,0,0,49.233,NA,ENSG00000196364::PRSS29P,2488,2511,MMMMMMMMMMMMMMMMXMMMMMM,1,9,rc,0,0,0.9,0,0.5616535668,,-473,-450
+rs769446,23,27,50,minus,GGGATGGGAGGGGCTGGGGG NGG,NA,NA,,NA,NA,8 73 8 8,0,0,49.233,NA,20,45925428,45925451,MMMMMMMMMMMMMMMXMMMMMMM,1,9,rc,0,0,0.9,0,0.5616535668,,-473,-450
+rs73050293,23,2,25,minus,GAAGGCACGTGTCTTTGTAA NGG,NA,NA,,NA,NA,32 32 20 16,100,0,46,NA,ENSG00000130202::PVRL2,30291,30314,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.3,0,0,,-498,-475
+rs7412,23,26,49,plus,GCCTGGCAGTGTACCAGGCC NGG,NA,NA,,NA,NA,12 29 12 45,100,0,56,NA,ENSG00000130203::APOE,3069,3092,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0,0,,-474,-451
+rs7412,23,21,44,plus,GAAGCGCCTGGCAGTGTACC NGG,NA,NA,,NA,NA,20 32 12 36,100,0,51.4212,NA,ENSG00000130203::APOE,3064,3087,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0710609198323978,0,,-479,-456
+rs7254133,23,8,31,plus,GTAAATTTAGCAGGACGCGG NGG,NA,NA,,NA,NA,24 16 24 36,100,0,84.9903,NA,19,44935280,44935303,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.842914339351525,0.6066043932,,-492,-469
+rs10119,23,25,48,plus,GGAATCCCTCCCGGGACCCC NGG,NA,NA,,NA,NA,16 48 8 28,100,0,56,NA,ENSG00000130204::TOMM40,12824,12847,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0,0,,-475,-452
+rs10119,23,14,37,minus,GGGAGGGATTCCGGAATTGA NGG,NA,NA,,NA,NA,16 48 20 16,53.0434,0,58.0463,NA,ENSG00000130204::TOMM40,12835,12858,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0.155256782381904,0.247061596,,-486,-463
+rs10119,23,14,37,minus,GGGAGGGATTCCGGAATTGA NGG,NA,NA,,NA,NA,16 48 20 16,53.0434,0,58.0463,NA,14,19268397,19268420,XMMMMMMMMMMMMMMMMMMMMMM,1,4,fw,0,0,0.5,0.155256782381904,0.247061596,,-486,-463
+rs10119,23,14,37,minus,GGGAGGGATTCCGGAATTGA NGG,NA,NA,,NA,NA,16 48 20 16,53.0434,0,58.0463,NA,ENSG00000277128::RP11-146E13.4,3850,3873,MMMMMMMMMMMMMMMMMMMMMMX,1,4,rc,0,0,0.5,0.155256782381904,0.247061596,,-486,-463
+rs10119,23,14,37,minus,GGGAGGGATTCCGGAATTGA NGG,NA,NA,,NA,NA,16 48 20 16,53.0434,0,58.0463,NA,ENSG00000223875::NBEAP3,949,972,MMMMMMMMMMMMMMMMMMMMMMX,1,4,rc,0,0,0.5,0.155256782381904,0.247061596,,-486,-463
+rs10119,23,13,36,minus,GGAGGGATTCCGGAATTGAG NGG,NA,NA,,NA,NA,16 52 20 12,40,0,71.2455,NA,ENSG00000130204::TOMM40,12836,12859,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0.60632383179415,0.455951832,,-487,-464
+rs10119,23,13,36,minus,GGAGGGATTCCGGAATTGAG NGG,NA,NA,,NA,NA,16 52 20 12,40,0,71.2455,NA,14,19268398,19268421,MMMMMMMMMMMMMMMMMMMMMMM,0,4,fw,0,0,0.5,0.60632383179415,0.455951832,,-487,-464
+rs10119,23,13,36,minus,GGAGGGATTCCGGAATTGAG NGG,NA,NA,,NA,NA,16 52 20 12,40,0,71.2455,NA,ENSG00000277128::RP11-146E13.4,3849,3872,MMMMMMMMMMMMMMMMMMMMMMM,0,4,rc,0,0,0.5,0.60632383179415,0.455951832,,-487,-464
+rs10119,23,13,36,minus,GGAGGGATTCCGGAATTGAG NGG,NA,NA,,NA,NA,16 52 20 12,40,0,71.2455,NA,ENSG00000223875::NBEAP3,948,971,MMMMMMMMMMMMMMMMMMMMMMM,0,4,rc,0,0,0.5,0.60632383179415,0.455951832,,-487,-464
+rs71352236,23,12,35,plus,GTACGCTGTGAGTGTATCGG NGG,NA,NA,,NA,NA,12 12 28 48,100,0,75.6402,NA,ENSG00000130202::PVRL2,25968,25991,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.812224256363198,0.3697880072,,-488,-465
+rs8102895,23,15,38,plus,GGCTGGGAGAAAGACGAGTA NGG,NA,NA,,NA,NA,28 12 12 48,100,0,60.4729,NA,ENSG00000104853::CLPTM1,611,634,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.185783960442831,0.2378623628,,-485,-462
+rs8102895,23,23,46,plus,GAAAGACGAGTACGGTGGCC NGG,NA,NA,,NA,NA,28 16 16 40,100,0,57.9924,NA,ENSG00000104853::CLPTM1,619,642,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.0996200468024708,0,,-477,-454
+rs8102895,23,27,50,plus,GACGAGTACGGTGGCCAGGT NGG,NA,NA,,NA,NA,17 17 17 47,100,0,54,NA,ENSG00000104853::CLPTM1,623,646,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0,0,,-473,-450
+rs59007384,23,11,34,plus,GAGGCCCAGACAGGGTTGGG NGG,NA,NA,,NA,NA,20 20 8 52,100,0,65.5899,NA,ENSG00000130204::TOMM40,2825,2848,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.147055671758137,0.3324435696,,-489,-466
+rs59007384,23,10,33,plus,GGAGGCCCAGACAGGGTTGG NGG,NA,NA,,NA,NA,20 16 8 56,84.3478,0,61.0808,NA,ENSG00000130204::TOMM40,2824,2847,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.7,0.165670207694591,0.188372592,,-490,-467
+rs59007384,23,10,33,plus,GGAGGCCCAGACAGGGTTGG NGG,NA,NA,,NA,NA,20 16 8 56,84.3478,0,61.0808,NA,ENSG00000163785::RYK,175777,175800,MMMXMMMMMMMMMMMMMMMMMMM,1,2,fw,0,0,0.7,0.165670207694591,0.188372592,,-490,-467
+rs283813,23,9,32,plus,GGGGTAGGAGGTAGGACAAG NGG,NA,NA,,NA,NA,28 4 12 56,84.3478,0,59.3822,NA,ENSG00000267282::CTB-129P6.4,3883,3906,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.5,0.197085894630424,0.2720279688,,-491,-468
+rs283813,23,9,32,plus,GGGGTAGGAGGTAGGACAAG NGG,NA,NA,,NA,NA,28 4 12 56,84.3478,0,59.3822,NA,ENSG00000153283::CD96,278341,278364,MMMMMMMMMMMMMMMXMMMMMMM,1,2,fw,0,0,0.5,0.197085894630424,0.2720279688,,-491,-468
+rs35568738,23,7,30,minus,GGTACTAAGGGGGTGGACGT NGG,NA,NA,,NA,NA,16 52 20 12,100,0,64.3544,NA,ENSG00000130204::TOMM40,8874,8897,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.187503773552427,0.3302176748,,-493,-470
+rs144261139,23,7,30,plus,GAAAGAATGTCCCCTGCCCA NGG,NA,NA,,NA,NA,28 28 16 28,100,0,61.5373,NA,ENSG00000267282::CTB-129P6.4,54,77,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.1161495278472,0.2607194176,,-493,-470
+rs1038026,23,14,37,plus,GTAGGTAGAGCAGCCAGGCG NGG,NA,NA,,NA,NA,20 16 16 48,100,0,75.6085,NA,ENSG00000130204::TOMM40,11225,11248,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.499625532320013,0.4807996004,,-486,-463
+rs41290100,23,24,47,plus,GCGTTCCAGGAATGGAAAGG NGG,NA,NA,,NA,NA,24 16 16 44,100,0,61.0841,NA,ENSG00000130202::PVRL2,21508,21531,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.454208268449474,0,,-476,-453
+rs41290100,23,0,23,plus,GTGGGCATGAGATGGGAGCT NGG,NA,NA,,NA,NA,16 12 16 56,100,0,58.9548,NA,ENSG00000130202::PVRL2,21484,21507,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0,0.247740796,,-500,-477
+rs41290100,23,22,45,plus,GCGCGTTCCAGGAATGGAAA NGG,NA,NA,,NA,NA,24 16 12 48,100,0,57.3297,NA,ENSG00000130202::PVRL2,21506,21529,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0.466486137897164,0,,-478,-455
+rs41290100,23,21,44,plus,GGCGCGTTCCAGGAATGGAA NGG,NA,NA,,NA,NA,24 16 12 48,100,0,50.0718,NA,ENSG00000130202::PVRL2,21505,21528,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0.103592009166061,0,,-479,-456
+rs41290120,23,13,36,plus,GCTGGGGGTCTCGGGAGGGG NGG,NA,NA,,NA,NA,8 16 12 64,100,0,67.4353,NA,ENSG00000130202::PVRL2,33231,33254,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.059592139697189,0.512176746,,-487,-464
+rs41290120,23,10,33,plus,GTTGCTGGGGGTCTCGGGAG NGG,NA,NA,,NA,NA,8 12 20 60,100,0,66.0892,NA,ENSG00000130202::PVRL2,33228,33251,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.0254808217221259,0.4789801004,,-490,-467
+rs41290120,23,9,32,plus,GGTTGCTGGGGGTCTCGGGA NGG,NA,NA,,NA,NA,8 12 20 60,100,0,64.2822,NA,ENSG00000130202::PVRL2,33227,33250,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.174996810982881,0.3391151832,,-491,-468
+rs73558179,23,7,30,plus,GGCAGACTTGGGAGGTGATG NGG,NA,NA,,NA,NA,16 8 20 56,100,0,56.2166,NA,ENSG00000104853::CLPTM1,18644,18667,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.049142763599777,0.1616892096,,-493,-470
+rs73558179,23,6,29,plus,GGGCAGACTTGGGAGGTGAT NGG,NA,NA,,NA,NA,16 8 20 56,100,0,52.6145,NA,ENSG00000104853::CLPTM1,18643,18666,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.0551890446047648,-0.0244619884,,-494,-471
+rs41290102,23,11,34,plus,GAAGGGAGCTGGGACGAGAG NGG,NA,NA,,NA,NA,28 8 4 60,100,0,64.889,NA,ENSG00000130202::PVRL2,21742,21765,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.101787437325652,0.4426643224,,-489,-466
+rs41290102,23,0,23,plus,GGACGGAGGTAGAAGGGAGC NGG,NA,NA,,NA,NA,28 8 8 56,100,0,58.144,NA,ENSG00000130202::PVRL2,21731,21754,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0,0.3072040508,,-500,-477
+rs41290102,23,1,24,plus,GACGGAGGTAGAAGGGAGCT NGG,NA,NA,,NA,NA,28 12 8 52,100,0,57.2701,NA,ENSG00000130202::PVRL2,21732,21755,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0,0.16350841,,-499,-476
+rs72654445,23,16,39,plus,GGGAAGATGGCCACAGGGAC NGG,NA,NA,,NA,NA,32 20 4 44,80,0,59.3592,NA,19,44926490,44926513,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.6,0.0436017719195277,0.3243596624,,-484,-461
+rs72654445,23,16,39,plus,GGGAAGATGGCCACAGGGAC NGG,NA,NA,,NA,NA,32 20 4 44,80,0,59.3592,NA,ENSG00000280087::CTB-129P6.7,4559,4582,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.6,0.0436017719195277,0.3243596624,,-484,-461
+rs72654445,23,3,26,plus,GGGAGACCCCTGAGGGAAGA NGG,NA,NA,,NA,NA,24 24 8 44,80,0,53.6053,NA,19,44926477,44926500,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.5,0,0.1802678392,,-497,-474
+rs72654445,23,3,26,plus,GGGAGACCCCTGAGGGAAGA NGG,NA,NA,,NA,NA,24 24 8 44,80,0,53.6053,NA,ENSG00000280087::CTB-129P6.7,4546,4569,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.5,0,0.1802678392,,-497,-474
+rs11673139,23,5,28,minus,GGTCCCACGACAGCCTTGTG NGG,NA,NA,,NA,NA,20 36 16 28,100,0,57.0011,NA,ENSG00000130202::PVRL2,33585,33608,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.250055839531953,0,,-495,-472
+rs11673139,23,13,36,plus,GGCTGTCGTGGGACCCAGTA NGG,NA,NA,,NA,NA,20 24 16 40,100,0,51.0775,NA,ENSG00000130202::PVRL2,33593,33616,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0373656914601028,0.0165111344,,-487,-464
+rs429358,23,7,30,plus,GCGGACATGGAGGACGTGTG NGG,NA,NA,,NA,NA,16 24 12 48,100,0,63.5671,NA,ENSG00000130203::APOE,2912,2935,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.270722348175749,0.2076340748,,-493,-470
+rs429358,23,15,38,plus,GGAGGACGTGTGCGGCCGCC NGG,NA,NA,,NA,NA,8 24 16 52,100,0,42.6519,NA,ENSG00000130203::APOE,2920,2943,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.9,0.237845395010549,-0.0052501404,,-485,-462
+rs60049679,23,6,29,plus,GACACGGTGTGAATGAGGGG NGG,NA,NA,,NA,NA,24 8 16 52,80,0,78.6817,NA,ENSG00000280087::CTB-129P6.7,4501,4524,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.7,0.607949643417523,0.6261378268,,-494,-471
+rs60049679,23,6,29,plus,GACACGGTGTGAATGAGGGG NGG,NA,NA,,NA,NA,24 8 16 52,80,0,78.6817,NA,19,44926432,44926455,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.7,0.607949643417523,0.6261378268,,-494,-471
+rs60049679,23,5,28,plus,GGACACGGTGTGAATGAGGG NGG,NA,NA,,NA,NA,24 8 12 56,80,0,67.5895,NA,19,44926431,44926454,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.6,0.367376186176946,0.4121037588,,-495,-472
+rs60049679,23,5,28,plus,GGACACGGTGTGAATGAGGG NGG,NA,NA,,NA,NA,24 8 12 56,80,0,67.5895,NA,ENSG00000280087::CTB-129P6.7,4500,4523,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.6,0.367376186176946,0.4121037588,,-495,-472
+rs60049679,23,4,27,plus,GGGACACGGTGTGAATGAGG NGG,NA,NA,,NA,NA,20 8 12 60,80,0,63.3013,NA,19,44926430,44926453,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.6,0.0509610871205505,0.5141049936,,-496,-473
+rs60049679,23,4,27,plus,GGGACACGGTGTGAATGAGG NGG,NA,NA,,NA,NA,20 8 12 60,80,0,63.3013,NA,ENSG00000280087::CTB-129P6.7,4499,4522,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.6,0.0509610871205505,0.5141049936,,-496,-473
+rs60049679,23,20,43,plus,GAGGGGGGGATGAGATCACA NGG,NA,NA,,NA,NA,24 8 16 52,80,0,58.4212,NA,19,44926446,44926469,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.5,0.154067625393504,0.2669952992,,-480,-457
+rs60049679,23,20,43,plus,GAGGGGGGGATGAGATCACA NGG,NA,NA,,NA,NA,24 8 16 52,80,0,58.4212,NA,ENSG00000280087::CTB-129P6.7,4515,4538,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.5,0.154067625393504,0.2669952992,,-480,-457
+rs1064725,23,18,41,plus,GACTCCCTCCATGTGGCCCC NGG,NA,NA,,NA,NA,12 40 20 28,100,0,61.9129,NA,ENSG00000130208::APOC1,5050,5073,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.055828675566413,0.2398211268,,-482,-459
+rs1064725,23,0,23,minus,GAGTCCTCAGCACAGGCGCT NGG,NA,NA,,NA,NA,12 44 16 28,100,0,56,NA,ENSG00000130208::APOC1,5032,5055,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0,0,,-500,-477
+rs1064725,23,22,45,minus,GGCACCTGGGGCCACATGGA NGG,NA,NA,,NA,NA,12 48 16 24,100,0,55.861,NA,ENSG00000130208::APOC1,5054,5077,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.0595668351956824,0.1334880716,,-478,-455
+rs1064725,23,1,24,minus,GGAGTCCTCAGCACAGGCGC NGG,NA,NA,,NA,NA,12 40 20 28,100,0,54,NA,ENSG00000130208::APOC1,5033,5056,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0,0,,-499,-476
+rs59325138,23,5,28,plus,GCCAGGCTGACACGTGGTTG NGG,NA,NA,,NA,NA,12 24 16 48,80,0,61.4057,NA,ENSG00000280087::CTB-129P6.7,3639,3662,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.7,0.137433959676293,0.2328554292,,-495,-472
+rs59325138,23,5,28,plus,GCCAGGCTGACACGTGGTTG NGG,NA,NA,,NA,NA,12 24 16 48,80,0,61.4057,NA,19,44925569,44925592,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.7,0.137433959676293,0.2328554292,,-495,-472
+rs11668861,23,22,45,plus,GAGGACCCCACAGCACATTC NGG,NA,NA,,NA,NA,32 32 8 28,100,0,50.8492,NA,ENSG00000130202::PVRL2,31535,31558,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0424619959597043,0,,-478,-455
+rs12983572,23,11,34,minus,GTGAGTGACTTACCTCTCTG NGG,NA,NA,,NA,NA,28 32 20 20,100,0,59.2395,NA,ENSG00000267114::CTB-129P6.11,3517,3540,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.155159575512497,0.2068162796,,-489,-466
+rs62118471,23,8,31,minus,GCATCAGTGGGGGTCCTGGA NGG,NA,NA,,NA,NA,16 52 16 16,100,0,60.4005,NA,ENSG00000266958::AC006126.3,386,409,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.201678292496611,0.2183468192,,-492,-469
+rs111243475,23,21,44,minus,GTGTAATTGACCAGTTGCGG NGG,NA,NA,,NA,NA,28 44 16 12,100,0,70.5925,NA,ENSG00000266958::AC006126.3,920,943,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.398586234937099,0.531039886,,-479,-456
+rs139995984,23,27,50,minus,GGGCCCATGTGGGACATGCT NGG,NA,NA,,NA,NA,17 47 13 21,100,0,53.9024,NA,19,45071226,45071249,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0,0.0951218628,,-473,-450
+rs112481437,23,3,26,plus,GGAGTTTGGATCCAGGTGGA NGG,NA,NA,,NA,NA,20 8 24 48,100,0,56.8621,NA,ENSG00000104859::CLASRP,6815,6838,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0,0.1431064924,,-497,-474
+rs112481437,23,23,46,plus,GGGATGGTGCAGAGGAAGGA NGG,NA,NA,,NA,NA,28 8 12 52,100,0,55.3739,NA,ENSG00000104859::CLASRP,6835,6858,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.26869762503619,0,,-477,-454
+rs149553138,23,7,30,minus,GGGGCGGATCTGGACCCAGG NGG,NA,NA,,NA,NA,12 48 12 28,100,0,72.5747,NA,ENSG00000007255::TRAPPC6A,6274,6297,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0.354596011910868,0.4741405396,,-493,-470
+rs149553138,23,10,33,minus,GCTGGGGCGGATCTGGACCC NGG,NA,NA,,NA,NA,16 48 12 24,100,0,67.6661,NA,ENSG00000007255::TRAPPC6A,6277,6300,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.238196720134658,0.4451120704,,-490,-467
+rs149553138,23,4,27,minus,GCGGATCTGGACCCAGGCGG NGG,NA,NA,,NA,NA,12 52 12 24,100,0,62.998,NA,ENSG00000007255::TRAPPC6A,6271,6294,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0.349904478177799,0,,-496,-473
+rs149553138,23,17,40,minus,GGTAAGTGCTGGGGCGGATC NGG,NA,NA,,NA,NA,24 48 12 16,100,0,53.2616,NA,ENSG00000007255::TRAPPC6A,6284,6307,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.0166857737734307,-0.053604866,,-483,-460
+rs149553138,23,25,48,plus,GCCCCAGCACTTACCAGTGT NGG,NA,NA,,NA,NA,20 36 16 28,100,0,52,NA,ENSG00000007255::TRAPPC6A,6292,6315,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0,0,,-475,-452
+rs149553138,23,27,50,minus,GTCCCACACTGGTAAGTGCT NGG,NA,NA,,NA,NA,21 34 17 26,100,0,50.1443,NA,ENSG00000007255::TRAPPC6A,6294,6317,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0,0.00721850159999999,,-473,-450
+rs346751,23,19,42,plus,GTAGCATTGACTGATTTCTG NGG,NA,NA,,NA,NA,16 16 40 28,100,0,61.1048,NA,ENSG00000130201::EXOC3L2,18548,18571,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0.415216323067157,0.240025364,,-481,-458
+rs4803791,23,8,31,minus,GATCACTTAAGCCTGAGACG NGG,NA,NA,,NA,NA,20 32 28 20,53.0434,0,76.3015,NA,ENSG00000267618::RAD51L3-RFFL,16897,16920,MMMMMMMMMMMMMMMMMMXMMMM,1,4,fw,0,0,0.6,0.81647293882503,0.3986045196,,-492,-469
+rs4803791,23,8,31,minus,GATCACTTAAGCCTGAGACG NGG,NA,NA,,NA,NA,20 32 28 20,53.0434,0,76.3015,NA,ENSG00000104856::RELB,18878,18901,MMMMMMMMMMMMMMMMMMMMMMM,0,4,rc,0,0,0.6,0.81647293882503,0.3986045196,,-492,-469
+rs4803791,23,8,31,minus,GATCACTTAAGCCTGAGACG NGG,NA,NA,,NA,NA,20 32 28 20,53.0434,0,76.3015,NA,12,121236755,121236778,MMMMMMMMMMMMMMMMMMXMMMM,1,4,fw,0,0,0.6,0.81647293882503,0.3986045196,,-492,-469
+rs4803791,23,8,31,minus,GATCACTTAAGCCTGAGACG NGG,NA,NA,,NA,NA,20 32 28 20,53.0434,0,76.3015,NA,ENSG00000156234::CXCL13,15790,15813,MMMMMMMMMMMMMMMMMMXMMMM,1,4,fw,0,0,0.6,0.81647293882503,0.3986045196,,-492,-469
+rs185181700,23,10,33,minus,GGCAAGTCCTGGTGCCTTGC NGG,NA,NA,,NA,NA,28 40 8 24,37.3913,0,49.6284,NA,ENSG00000266958::AC006126.3,15814,15837,MMMMMMMMMMMMMMMMMMMMMMM,0,5,rc,0,0,0.6,0.00564322378922244,-0.1242228812,,-490,-467
+rs185181700,23,10,33,minus,GGCAAGTCCTGGTGCCTTGC NGG,NA,NA,,NA,NA,28 40 8 24,37.3913,0,49.6284,NA,13,46934495,46934518,MMMMMMMMMMMMMMMXMMMMMMM,1,5,fw,0,0,0.6,0.00564322378922244,-0.1242228812,,-490,-467
+rs185181700,23,10,33,minus,GGCAAGTCCTGGTGCCTTGC NGG,NA,NA,,NA,NA,28 40 8 24,37.3913,0,49.6284,NA,ENSG00000125631::HTR5BP,19612,19635,MMMMMMMXMMMMMMMMMMMMMMM,1,5,rc,0,0,0.6,0.00564322378922244,-0.1242228812,,-490,-467
+rs185181700,23,10,33,minus,GGCAAGTCCTGGTGCCTTGC NGG,NA,NA,,NA,NA,28 40 8 24,37.3913,0,49.6284,NA,12,20175004,20175027,MMMMMMXMMMMMMMMMMMMMMMM,1,5,rc,0,0,0.6,0.00564322378922244,-0.1242228812,,-490,-467
+rs185181700,23,10,33,minus,GGCAAGTCCTGGTGCCTTGC NGG,NA,NA,,NA,NA,28 40 8 24,37.3913,0,49.6284,NA,ENSG00000182348::ZNF804B,421877,421900,MMMMMMXMMMMMMMMMMMMMMMM,1,5,rc,0,0,0.6,0.00564322378922244,-0.1242228812,,-490,-467
+rs185181700,23,9,32,minus,GCAAGTCCTGGTGCCTTGCT NGG,NA,NA,,NA,NA,24 44 8 24,0,0,59.3514,NA,X,151191315,151191338,MMMMMMMMMMMMMMMXMMMMMMM,1,8,fw,0,0,0.7,0.195042506038173,0.0725309132,,-491,-468
+rs185181700,23,9,32,minus,GCAAGTCCTGGTGCCTTGCT NGG,NA,NA,,NA,NA,24 44 8 24,0,0,59.3514,NA,ENSG00000113100::CDH9,38915,38938,XMMMMMMMMMMMMMMMMMMMMMM,1,8,fw,0,0,0.7,0.195042506038173,0.0725309132,,-491,-468
+rs185181700,23,9,32,minus,GCAAGTCCTGGTGCCTTGCT NGG,NA,NA,,NA,NA,24 44 8 24,0,0,59.3514,NA,ENSG00000266958::AC006126.3,15813,15836,MMMMMMMMMMMMMMMMMMMMMMM,0,8,rc,0,0,0.7,0.195042506038173,0.0725309132,,-491,-468
+rs185181700,23,9,32,minus,GCAAGTCCTGGTGCCTTGCT NGG,NA,NA,,NA,NA,24 44 8 24,0,0,59.3514,NA,13,46934496,46934519,MMMMMMMMMMMMMMXMMMMMMMM,1,8,fw,0,0,0.7,0.195042506038173,0.0725309132,,-491,-468
+rs185181700,23,9,32,minus,GCAAGTCCTGGTGCCTTGCT NGG,NA,NA,,NA,NA,24 44 8 24,0,0,59.3514,NA,13,57199644,57199667,MMMMMMMMXMMMMMMMMMMMMMM,1,8,rc,0,0,0.7,0.195042506038173,0.0725309132,,-491,-468
+rs185181700,23,9,32,minus,GCAAGTCCTGGTGCCTTGCT NGG,NA,NA,,NA,NA,24 44 8 24,0,0,59.3514,NA,ENSG00000225087::RP4-660H19.1,59597,59620,MMMMMMMMXMMMMMMMMMMMMMM,1,8,rc,0,0,0.7,0.195042506038173,0.0725309132,,-491,-468
+rs185181700,23,9,32,minus,GCAAGTCCTGGTGCCTTGCT NGG,NA,NA,,NA,NA,24 44 8 24,0,0,59.3514,NA,ENSG00000182348::ZNF804B,421876,421899,MMMMMMMXMMMMMMMMMMMMMMM,1,8,rc,0,0,0.7,0.195042506038173,0.0725309132,,-491,-468
+rs185181700,23,9,32,minus,GCAAGTCCTGGTGCCTTGCT NGG,NA,NA,,NA,NA,24 44 8 24,0,0,59.3514,NA,12,20175003,20175026,MMMMMMMXMMMMMMMMMMMMMMM,1,8,rc,0,0,0.7,0.195042506038173,0.0725309132,,-491,-468
+rs117612135,23,25,48,minus,GGAGGCTGGGCGCTCAGGAG NGG,NA,NA,,NA,NA,8 60 16 16,100,0,63.9641,NA,19,45001269,45001292,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0,0.4982062444,,-475,-452
+rs117612135,23,21,44,minus,GCTGGGCGCTCAGGAGGGGT NGG,NA,NA,,NA,NA,16 56 12 16,100,0,61.3161,NA,19,45001265,45001288,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.0441310213881486,0.3216750972,,-479,-456
+rs117612135,23,26,49,minus,GGGAGGCTGGGCGCTCAGGA NGG,NA,NA,,NA,NA,8 58 16 16,100,0,61.2947,NA,19,45001270,45001293,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0,0.3647365512,,-474,-451
+rs117612135,23,16,39,minus,GCGCTCAGGAGGGGTTGGGC NGG,NA,NA,,NA,NA,12 60 12 16,100,0,60.8095,NA,19,45001260,45001283,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.0146369722463026,0.325839856,,-484,-461
+rs147188206,23,9,32,minus,GCACCCAGCTCCCTCTGCCC NGG,NA,NA,,NA,NA,16 24 8 52,100,0,60.8578,NA,ENSG00000104859::CLASRP,10273,10296,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.0891059312977826,0.2537853348,,-491,-468
+rs147188206,23,6,29,plus,GTCCCAGGGCAGAGGGAGCT NGG,NA,NA,,NA,NA,16 20 12 52,100,0,54.7783,NA,ENSG00000104859::CLASRP,10270,10293,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.0135083225274057,0.0254073312,,-494,-471
+rs76971643,23,25,48,plus,GTCTGTGTCCCCACTCGCTA NGG,NA,NA,,NA,NA,12 36 24 28,100,0,50,NA,ENSG00000007255::TRAPPC6A,6936,6959,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0,0,,-475,-452
+rs146723120,23,9,32,minus,GCCCGAGGCGCAGCACGCTG NGG,NA,NA,,NA,NA,4 40 16 40,100,0,76.5443,NA,ENSG00000104866::PPP1R37,53550,53573,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0.534087858336653,0.4931317484,,-491,-468
+rs146723120,23,24,47,minus,GCTTGGTGGAGGCCAGCCCG NGG,NA,NA,,NA,NA,12 48 16 24,100,0,69.6163,NA,ENSG00000104866::PPP1R37,53565,53588,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0,0.6808173244,,-476,-453
+rs76856627,23,23,46,plus,GCATACTGTGTCGTTTGGTG NGG,NA,NA,,NA,NA,8 20 36 36,100,0,52.4276,NA,ENSG00000104859::CLASRP,1455,1478,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.121382326559877,0,,-477,-454
+rs75463276,23,14,37,plus,GCTCCAGAGCTCCTGAGCCA NGG,NA,NA,,NA,NA,16 36 12 36,100,0,69.1858,NA,ENSG00000104866::PPP1R37,44167,44190,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.375969418893477,0.3833252528,,-486,-463
+rs75463276,23,20,43,plus,GAGCTCCTGAGCCAGGGGCT NGG,NA,NA,,NA,NA,20 28 12 40,100,0,58.3385,NA,ENSG00000104866::PPP1R37,44173,44196,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.0576316947466623,0.1592976132,,-480,-457
+rs75463276,23,13,36,plus,GGCTCCAGAGCTCCTGAGCC NGG,NA,NA,,NA,NA,16 32 12 40,84.3478,0,55.7248,NA,ENSG00000104866::PPP1R37,44166,44189,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.7,0.0201588738760945,0.0660830552,,-487,-464
+rs75463276,23,13,36,plus,GGCTCCAGAGCTCCTGAGCC NGG,NA,NA,,NA,NA,16 32 12 40,84.3478,0,55.7248,NA,ENSG00000187258::NPSR1,156017,156040,MMMMMMMMMMMMMXMMMMMMMMM,1,2,rc,0,0,0.7,0.0201588738760945,0.0660830552,,-487,-464
+rs76271385,23,19,42,plus,GCTGAAGATGGCAGAAGCCA NGG,NA,NA,,NA,NA,32 20 8 40,100,0,79.2933,NA,ENSG00000104866::PPP1R37,18202,18225,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.833118446855646,0.5315470472,,-481,-458
+rs35577563,23,25,48,minus,GAGCTTCAGGATCGAGAGGT NGG,NA,NA,,NA,NA,20 48 20 12,84.3478,0,56.4762,NA,2,170084513,170084536,MMMMMMMMMMXMMMMMMMMMMMM,1,2,rc,0,0,0.6,0,0.2238107684,,-475,-452
+rs35577563,23,25,48,minus,GAGCTTCAGGATCGAGAGGT NGG,NA,NA,,NA,NA,20 48 20 12,84.3478,0,56.4762,NA,19,45001091,45001114,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.6,0,0.2238107684,,-475,-452
+rs12461065,23,3,26,minus,GGCCAAGGACACGCTGGCTG NGG,NA,NA,,NA,NA,8 44 20 28,100,0,58.1769,NA,ENSG00000104866::PPP1R37,10632,10655,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0.108845218374069,0,,-497,-474
+rs12461065,23,2,25,minus,GCCAAGGACACGCTGGCTGG NGG,NA,NA,,NA,NA,8 48 20 24,100,0,56,NA,ENSG00000104866::PPP1R37,10631,10654,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0,0,,-498,-475
+rs117261169,23,19,42,plus,GAGGCTCGGCTTTGCCTCCT NGG,NA,NA,,NA,NA,4 32 28 36,100,0,53.5471,NA,ENSG00000104853::CLPTM1,33183,33206,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.00813382838299056,-0.0307756132,,-481,-458
+rs117261169,23,3,26,minus,GAGCCTCACGCCACAGACAC NGG,NA,NA,,NA,NA,4 24 28 44,100,0,52.808,NA,ENSG00000104853::CLPTM1,33167,33190,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.140401681573419,0,,-497,-474
+rs145903417,23,23,46,minus,GAAGAGGTCTGAGGCCAGAA NGG,NA,NA,,NA,NA,12 40 32 16,100,0,59.8891,NA,ENSG00000104866::PPP1R37,34448,34471,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.117371608065114,0.2770868984,,-477,-454
+rs145903417,23,0,23,plus,GGGAAGACAGGAAGAGAAGT NGG,NA,NA,,NA,NA,36 12 4 48,100,0,56.48,NA,ENSG00000104866::PPP1R37,34425,34448,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0,0.32400043,,-500,-477
+rs145903417,23,9,32,plus,GGAAGAGAAGTGGGCCATTC NGG,NA,NA,,NA,NA,24 20 16 40,100,0,50.3635,NA,ENSG00000104866::PPP1R37,34434,34457,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.0205137649190101,-0.1023368176,,-491,-468
+rs7251911,23,24,47,minus,GTGGTCGCGGGCTGGCTCGC NGG,NA,NA,,NA,NA,16 48 8 28,100,0,59.0149,NA,ENSG00000267348::CTB-179K24.3,2633,2656,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0,0.2507498672,,-476,-453
+rs7251911,23,2,25,minus,GCTTGGAAGCCAGCACAGCC NGG,NA,NA,,NA,NA,8 36 24 32,100,0,56,NA,ENSG00000267348::CTB-179K24.3,2611,2634,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0,0,,-498,-475
+rs3865444,23,4,27,plus,GCAGCCTCACCTAGATCCAT NGG,NA,NA,,NA,NA,20 32 20 28,100,0,57.6662,NA,19,51224704,51224727,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.216875573372553,0.1664391324,,-496,-473
+rs57891859,23,8,31,minus,GTGCTTGGGAACGATAAACC NGG,NA,NA,,NA,NA,20 36 24 20,100,0,58.0279,NA,ENSG00000152128::TMEM163,251270,251293,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.103130970702177,0.2982689232,,-492,-469
+rs34311866,23,20,43,minus,GCATCTTCCAGCTGGCCATG NGG,NA,NA,,NA,NA,24 28 16 32,100,0,59.426,NA,ENSG00000127419::TMEM175,25754,25777,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.27527179976429,0.0960300156,,-480,-457
+rs9291637,23,14,37,minus,GAAGTTCCAAGCCACCAGGA NGG,NA,NA,,NA,NA,12 36 28 24,100,0,68.0072,NA,ENSG00000109743::BST1,19077,19100,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.312566250333789,0.3877959348,,-486,-463
+rs3775121,23,21,44,plus,GAGCGTCTGCATCTAACCCT NGG,NA,NA,,NA,NA,16 32 20 32,100,0,58.4637,NA,ENSG00000178950::GAK,50437,50460,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.323187577265067,0,,-479,-456
+rs12640185,23,19,42,plus,GGGATATAGAATGAGGTACA NGG,NA,NA,,NA,NA,32 8 20 40,100,0,59.559,NA,ENSG00000138760::SCARB2,52464,52487,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.210327029769144,0.1676269684,,-481,-458
+rs4373155,23,24,47,plus,GTATGCAGAACTGGTAACTG NGG,NA,NA,,NA,NA,32 16 20 32,100,0,62.4861,NA,4,11021174,11021197,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.624308505785231,0,,-476,-453
+rs4373155,23,15,38,plus,GGTCTGTGTGTATGCAGAAC NGG,NA,NA,,NA,NA,20 12 32 36,100,0,53.0528,NA,4,11021165,11021188,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0750639569497454,0.0775764796,,-485,-462
+rs72657707,23,20,43,plus,GTGAACAATGAAAGTGCCTG NGG,NA,NA,,NA,NA,28 12 20 40,100,0,59.1228,NA,ENSG00000251095::RP11-115D19.1,105999,106022,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.129386724118458,0.2267559184,,-480,-457
+rs72657707,23,22,45,plus,GAACAATGAAAGTGCCTGTG NGG,NA,NA,,NA,NA,28 16 16 40,100,0,54.5348,NA,ENSG00000251095::RP11-115D19.1,106001,106024,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.0267435374016681,0,,-478,-455
+rs10423015,23,12,35,plus,GTGGTTTGCACTTGTGTATC NGG,NA,NA,,NA,NA,8 12 44 36,100,0,43.1587,NA,ENSG00000012061::ERCC1,44442,44465,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0.00773477392103554,-0.2497987476,,-488,-465
+rs77988534,23,13,36,plus,GTGTCAGGCTGTGGGTATGA NGG,NA,NA,,NA,NA,12 8 28 52,100,0,62.9827,NA,ENSG00000104892::KLC3,7804,7827,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.364499025997286,0.1846370888,,-487,-464
+rs6599388,23,22,45,minus,GAGTGAGGAGACAGAGACGG NGG,NA,NA,,NA,NA,4 56 28 12,100,0,77.7481,NA,ENSG00000127419::TMEM175,12909,12932,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.578324592441934,0.6090836344,,-478,-455
+rs6599388,23,20,43,minus,GTGAGGAGACAGAGACGGCG NGG,NA,NA,,NA,NA,4 56 28 12,100,0,71.0474,NA,ENSG00000127419::TMEM175,12907,12930,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0.329235683626816,0.4231373988,,-480,-457
+rs6599388,23,25,48,minus,GGGGAGTGAGGAGACAGAGA NGG,NA,NA,,NA,NA,4 56 28 12,100,0,63.2471,NA,ENSG00000127419::TMEM175,12912,12935,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0,0.56235524,,-475,-452
+rs6599388,23,13,36,minus,GACAGAGACGGCGGGGGCCT NGG,NA,NA,,NA,NA,4 56 20 20,100,0,41.7832,NA,ENSG00000127419::TMEM175,12900,12923,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.9,0.00985361082327314,0.179306704,,-487,-464
+rs6599389,23,20,43,minus,GCTGAGGCAGCAACAAACGG NGG,NA,NA,,NA,NA,4 36 36 24,100,0,82.3062,NA,ENSG00000127419::TMEM175,12933,12956,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.689954299241673,0.8253579136,,-480,-457
+rs6599389,23,23,46,minus,GAAGCTGAGGCAGCAACAAA NGG,NA,NA,,NA,NA,4 32 40 24,100,0,65.9555,NA,ENSG00000127419::TMEM175,12936,12959,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.290422137551436,0.5073574868,,-477,-454
+rs6599389,23,11,34,minus,GCAACAAACGGCGGGGAGTG NGG,NA,NA,,NA,NA,4 44 32 20,100,0,58.0387,NA,ENSG00000127419::TMEM175,12924,12947,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.066817377040874,0.1351201616,,-489,-466
+rs11694743,23,19,42,minus,GGGGCGGGGCGGGGGATGGA NGG,NA,NA,,NA,NA,8 76 8 8,84.3478,0,59.2589,NA,ENSG00000136717::BIN1,36998,37021,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.7,0.0357718421523877,0.227174484,,-481,-458
+rs11694743,23,19,42,minus,GGGGCGGGGCGGGGGATGGA NGG,NA,NA,,NA,NA,8 76 8 8,84.3478,0,59.2589,NA,X,82430573,82430596,MMMMMMMXMMMMMMMMMMMMMMM,1,2,rc,0,0,0.7,0.0357718421523877,0.227174484,,-481,-458
+rs75087725,23,14,37,plus,GCACCGGCTCACAGGCTCCA NGG,NA,NA,,NA,NA,16 36 12 36,100,0,69.542,NA,ENSG00000184441::AP001062.7,1989,2012,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.622910037741518,0.154192928,,-486,-463
+rs75087725,23,13,36,plus,GGCACCGGCTCACAGGCTCC NGG,NA,NA,,NA,NA,16 36 12 36,100,0,56.5388,NA,ENSG00000184441::AP001062.7,1988,2011,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.0104265050350493,0.1165135964,,-487,-464
+rs346750,23,10,33,plus,GGTGCCGGAGCTCTTATTCT NGG,NA,NA,,NA,NA,16 24 28 32,100,0,48.3245,NA,ENSG00000130201::EXOC3L2,21324,21347,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.3,0.0477836910231419,0.0684460848,,-490,-467
+rs17783233,23,7,30,minus,GTTTATTTCAGTGAGGTGTG NGG,NA,NA,,NA,NA,36 48 12 4,100,0,60.5787,NA,ENSG00000145217::SLC26A1,3719,3742,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.214192463660507,0.1147429348,,-493,-470
+rs17783233,23,9,32,minus,GGGTTTATTTCAGTGAGGTG NGG,NA,NA,,NA,NA,36 40 16 8,100,0,60.3675,NA,ENSG00000145217::SLC26A1,3721,3744,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.0982809609161979,0.3200960092,,-491,-468
+rs17783233,23,8,31,minus,GGTTTATTTCAGTGAGGTGT NGG,NA,NA,,NA,NA,36 44 16 4,100,0,56.4464,NA,ENSG00000145217::SLC26A1,3720,3743,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.051562815557287,0.1707578028,,-492,-469
+rs75548401,23,8,31,minus,GAAGCACTGGATAAACATGA NGG,NA,NA,,NA,NA,12 32 40 16,64.3478,0,61.9527,NA,1,41252,41275,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.4,0.381650311261868,0.3159890144,,-492,-469
+rs75548401,23,8,31,minus,GAAGCACTGGATAAACATGA NGG,NA,NA,,NA,NA,12 32 40 16,64.3478,0,61.9527,NA,19,82863,82886,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.4,0.381650311261868,0.3159890144,,-492,-469
+rs75548401,23,8,31,minus,GAAGCACTGGATAAACATGA NGG,NA,NA,,NA,NA,12 32 40 16,64.3478,0,61.9527,NA,15,101949689,101949712,MMMMMMMMMMMMMMMMMMXMMMM,1,3,fw,0,0,0.4,0.381650311261868,0.3159890144,,-492,-469
+rs6127744,23,8,31,plus,GATAGAACTTGAGCCTGGCT NGG,NA,NA,,NA,NA,28 16 24 32,100,0,59.7739,NA,20,56411201,56411224,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.130223604436801,0.1584753988,,-492,-469
+rs6127744,23,21,44,minus,GGTGCCCATTCTTCCAAGCC NGG,NA,NA,,NA,NA,24 24 20 32,100,0,59.674,NA,20,56411214,56411237,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.07843853597284,0.3052636712,,-479,-456
+rs6705834,23,26,49,minus,GAAGGGGATTACCCTTCTTG NGG,NA,NA,,NA,NA,25 37 20 16,80,0,58.1881,NA,ENSG00000168918::INPP5D,53147,53170,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.6,0,0.3094062636,,-474,-451
+rs6705834,23,26,49,minus,GAAGGGGATTACCCTTCTTG NGG,NA,NA,,NA,NA,25 37 20 16,80,0,58.1881,NA,ENSG00000281614::INPP5D,53147,53170,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.6,0,0.3094062636,,-474,-451
+rs111716486,23,1,24,minus,GGCCTCCCAAAGTGCCAAAC NGG,NA,NA,,NA,NA,16 24 28 32,84.3478,0,50,NA,ENSG00000078070::MCCC1,76564,76587,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.5,0,0,,-499,-476
+rs111716486,23,1,24,minus,GGCCTCCCAAAGTGCCAAAC NGG,NA,NA,,NA,NA,16 24 28 32,84.3478,0,50,NA,ENSG00000179397::C1orf101,185056,185079,MMMXMMMMMMMMMMMMMMMMMMM,1,2,rc,0,0,0.5,0,0,,-499,-476
+rs13032148,23,4,27,plus,GGCTGCTGGGAGAACGCGCC NGG,NA,NA,,NA,NA,16 28 8 48,100,0,59.6817,NA,2,127107503,127107526,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.0670793835435742,0.1170084984,,-496,-473
+rs13032148,23,0,23,minus,GCGCGTTCTCCCAGCAGCCG NGG,NA,NA,,NA,NA,12 40 8 40,100,0,56,NA,2,127107499,127107522,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0,0,,-500,-477
+rs183442275,23,25,48,minus,GGCTGACAGGAGGAGGGTCG NGG,NA,NA,,NA,NA,8 64 16 12,100,0,62.4356,NA,ENSG00000007047::MARK4,224007,224030,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0,0.3217842496,,-475,-452
+rs183442275,23,26,49,minus,GGGCTGACAGGAGGAGGGTC NGG,NA,NA,,NA,NA,8 62 16 12,84.3478,0,58.147,NA,ENSG00000007047::MARK4,224008,224031,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.8,0,0.1073501188,,-474,-451
+rs183442275,23,26,49,minus,GGGCTGACAGGAGGAGGGTC NGG,NA,NA,,NA,NA,8 62 16 12,84.3478,0,58.147,NA,ENSG00000241973::PI4KA,150833,150856,MMMMXMMMMMMMMMMMMMMMMMM,1,2,rc,0,0,0.8,0,0.1073501188,,-474,-451
+rs183442275,23,27,50,minus,GGGGCTGACAGGAGGAGGGT NGG,NA,NA,,NA,NA,8 60 17 13,68.6956,0,60.6513,NA,21,46011360,46011383,MMMXMMMMMMMMMMMMMMMMMMM,1,3,rc,0,0,0.7,0,0.3325696076,,-473,-450
+rs183442275,23,27,50,minus,GGGGCTGACAGGAGGAGGGT NGG,NA,NA,,NA,NA,8 60 17 13,68.6956,0,60.6513,NA,ENSG00000007047::MARK4,224009,224032,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0,0.3325696076,,-473,-450
+rs183442275,23,27,50,minus,GGGGCTGACAGGAGGAGGGT NGG,NA,NA,,NA,NA,8 60 17 13,68.6956,0,60.6513,NA,13,98593746,98593769,MMMMMMMMMMMMMMMXMMMMMMM,1,3,rc,0,0,0.7,0,0.3325696076,,-473,-450
+rs45486093,23,14,37,plus,GAGCTGTCCCCTGTCCCCGG NGG,NA,NA,,NA,NA,8 40 16 36,100,0,72.5242,NA,ENSG00000178950::GAK,32596,32619,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.254189480595469,0.5720209888,,-486,-463
+rs45486093,23,21,44,minus,GCGTGGCCCTCCGGGGACAG NGG,NA,NA,,NA,NA,12 48 8 32,100,0,68.6441,NA,ENSG00000178950::GAK,32603,32626,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0.213357078735259,0.4188510008,,-479,-456
+rs45486093,23,8,31,minus,GGGACAGGGGACAGCTCTGT NGG,NA,NA,,NA,NA,12 52 16 20,100,0,56.3567,NA,ENSG00000178950::GAK,32590,32613,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.0378539616735855,0.1799854272,,-492,-469
+rs45486093,23,9,32,minus,GGGGACAGGGGACAGCTCTG NGG,NA,NA,,NA,NA,12 48 16 24,84.3478,0,56.1679,NA,ENSG00000158816::VWA5B1,2434,2457,MMMMMMMXMMMMMMMMMMMMMMM,1,2,fw,0,0,0.6,0.0157050345475943,0.192690824,,-491,-468
+rs45486093,23,9,32,minus,GGGGACAGGGGACAGCTCTG NGG,NA,NA,,NA,NA,12 48 16 24,84.3478,0,56.1679,NA,ENSG00000178950::GAK,32591,32614,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.6,0.0157050345475943,0.192690824,,-491,-468
+rs4663096,23,9,32,minus,GGCCTGACGCAGGCTGATGG NGG,NA,NA,,NA,NA,20 48 12 20,100,0,60.6183,NA,ENSG00000136717::BIN1,56147,56170,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.107916375052609,0.3230027736,,-491,-468
+rs35519415,23,8,31,minus,GAGTTTGGATTTCTTCATGT NGG,NA,NA,,NA,NA,48 28 16 8,84.3478,0,52.7531,NA,ENSG00000109743::BST1,5740,5763,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.4,0.0763916093699278,0.1612672392,,-492,-469
+rs35519415,23,8,31,minus,GAGTTTGGATTTCTTCATGT NGG,NA,NA,,NA,NA,48 28 16 8,84.3478,0,52.7531,NA,17,20793478,20793501,MMMMMMMMMMMMMMMMMXMMMMM,1,2,rc,0,0,0.4,0.0763916093699278,0.1612672392,,-492,-469
+rs345421,23,3,26,plus,GCAGATGGGGGAGCGGATGG NGG,NA,NA,,NA,NA,16 8 8 68,100,0,65.8295,NA,ENSG00000007047::MARK4,187181,187204,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0,0.4914757264,,-497,-474
+rs345421,23,15,38,plus,GCGGATGGGGGGGAGGGGAC NGG,NA,NA,,NA,NA,20 8 4 68,100,0,59.4265,NA,ENSG00000007047::MARK4,187193,187216,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.00310165046980257,0.2682262668,,-485,-462
+rs345421,23,9,32,plus,GGGGGAGCGGATGGGGGGGA NGG,NA,NA,,NA,NA,16 4 4 76,100,0,45.6261,NA,ENSG00000007047::MARK4,187187,187210,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.9,0.0220826090113763,0.359225428,,-491,-468
+rs345421,23,10,33,plus,GGGGAGCGGATGGGGGGGAG NGG,NA,NA,,NA,NA,16 8 4 72,100,0,45.4643,NA,ENSG00000007047::MARK4,187188,187211,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.9,0.00833778872617648,0.3648821908,,-490,-467
+rs345421,23,18,41,plus,GATGGGGGGGAGGGGACAGG NGG,NA,NA,,NA,NA,24 4 4 68,84.3478,0,67.8541,NA,ENSG00000007047::MARK4,187196,187219,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.7,0.143351720257097,0.5493553912,,-482,-459
+rs345421,23,18,41,plus,GATGGGGGGGAGGGGACAGG NGG,NA,NA,,NA,NA,24 4 4 68,84.3478,0,67.8541,NA,ENSG00000128268::MGAT3,33701,33724,MMMMMMMMMMMMMMMMMMMMMXM,1,2,rc,0,0,0.7,0.143351720257097,0.5493553912,,-482,-459
+rs55636820,23,6,29,plus,GGGGGCTTCAGAACCACCCG NGG,NA,NA,,NA,NA,20 32 8 40,100,0,80.6454,NA,ENSG00000136717::BIN1,6634,6657,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.598258968231681,0.6340116652,,-494,-471
+rs2737029,23,22,45,minus,GGATAGATAAGTCTCTCATA NGG,NA,NA,,NA,NA,28 28 32 12,100,0,55.397,NA,ENSG00000145335::SNCA,66500,66523,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0.212238775156404,0.1576120448,,-478,-455
+rs143202663,23,2,25,minus,GACGTATGTGCTGCCAGGCT NGG,NA,NA,,NA,NA,24 40 16 20,100,0,56,NA,6,40897478,40897501,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0,0,,-498,-475
+rs143332484,23,20,43,minus,GAAGGGCCCATGCCAGCGTG NGG,NA,NA,,NA,NA,12 44 20 24,100,0,63.34,NA,ENSG00000095970::TREM2,2958,2981,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.142312054263863,0.3246912,,-480,-457
+rs143332484,23,13,36,plus,GTGCTGACCACACGCTGGCA NGG,NA,NA,,NA,NA,16 32 16 36,100,0,59.2739,NA,ENSG00000095970::TREM2,2951,2974,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.0393995795877968,0.2243000068,,-487,-464
+rs9268544,23,27,50,plus,GCAGTGACTCTAGATCCTAC NGG,NA,NA,,NA,NA,21 26 26 26,100,0,50,NA,6,3657979,3658002,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0,0,,-473,-450
+rs10514906,23,22,45,plus,GATCCAGTTGTATTTCCCTG NGG,NA,NA,,NA,NA,12 24 40 24,100,0,60.7832,NA,ENSG00000251279::CTC-436P18.1,16664,16687,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.539164396437592,0,,-478,-455
+rs79485747,23,9,32,minus,GATATTTAAGCTGAGCACAG NGG,NA,NA,,NA,NA,24 32 32 12,100,0,64.3357,NA,6,40783121,40783144,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.201307999205985,0.4154818988,,-491,-468
+rs1980493,23,1,24,plus,GAGGACTCACCTTGTTGCTT NGG,NA,NA,,NA,NA,12 20 40 28,100,0,47.118,NA,ENSG00000168994::PXDC1,5056,5079,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.4,0,-0.0440975584,,-499,-476
+rs9268840,23,18,41,plus,GTCTTCACCCCATGGGGTGG NGG,NA,NA,,NA,NA,12 24 24 40,100,0,59.9921,NA,6,3793262,3793285,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.0342941775557739,0.2653115928,,-482,-459
+rs3806157,23,17,40,plus,GTCATCTGTAATGAGATGTC NGG,NA,NA,,NA,NA,28 12 28 32,100,0,51.1955,NA,ENSG00000168994::PXDC1,15631,15654,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.0286166717737177,-0.0688393224,,-483,-460
+rs9268840,23,6,29,minus,GTGGACCTGTGTTGGGGTCA NGG,NA,NA,,NA,NA,36 44 8 12,0,0,52.1333,NA,ENSG00000227384::HLA-DRB9,1187,1210,MMMMMMMMMMMMMMMMMMMMMMM,0,8,rc,0,0,0.6,0.00666555892617407,0,,-494,-471
+rs9268840,23,6,29,minus,GTGGACCTGTGTTGGGGTCA NGG,NA,NA,,NA,NA,36 44 8 12,0,0,52.1333,NA,ENSG00000226035::HLA-DRB9,1187,1210,MMMMMMMMMMMMMMMMMMMMMMM,0,8,rc,0,0,0.6,0.00666555892617407,0,,-494,-471
+rs9268840,23,6,29,minus,GTGGACCTGTGTTGGGGTCA NGG,NA,NA,,NA,NA,36 44 8 12,0,0,52.1333,NA,ENSG00000237591::HLA-DRB9,1187,1210,MMMMMMMMMMMMMMMMMMMMMMM,0,8,rc,0,0,0.6,0.00666555892617407,0,,-494,-471
+rs9268840,23,6,29,minus,GTGGACCTGTGTTGGGGTCA NGG,NA,NA,,NA,NA,36 44 8 12,0,0,52.1333,NA,ENSG00000234164::HLA-DRB9,1187,1210,MMMMMMMMMMMMMMMMMMMMMMM,0,8,rc,0,0,0.6,0.00666555892617407,0,,-494,-471
+rs9268840,23,6,29,minus,GTGGACCTGTGTTGGGGTCA NGG,NA,NA,,NA,NA,36 44 8 12,0,0,52.1333,NA,ENSG00000232705::HLA-DRB9,1187,1210,MMMMMMMMMMMMMMMMMMMMMMM,0,8,rc,0,0,0.6,0.00666555892617407,0,,-494,-471
+rs9268840,23,6,29,minus,GTGGACCTGTGTTGGGGTCA NGG,NA,NA,,NA,NA,36 44 8 12,0,0,52.1333,NA,ENSG00000228260::HLA-DRB9,1187,1210,MMMMMMMMMMMMMMMMMMMMMMM,0,8,rc,0,0,0.6,0.00666555892617407,0,,-494,-471
+rs9268840,23,6,29,minus,GTGGACCTGTGTTGGGGTCA NGG,NA,NA,,NA,NA,36 44 8 12,0,0,52.1333,NA,ENSG00000196301::HLA-DRB9,1187,1210,MMMMMMMMMMMMMMMMMMMMMMM,0,8,rc,0,0,0.6,0.00666555892617407,0,,-494,-471
+rs9268840,23,6,29,minus,GTGGACCTGTGTTGGGGTCA NGG,NA,NA,,NA,NA,36 44 8 12,0,0,52.1333,NA,ENSG00000227526::HLA-DRB9,1187,1210,MMMMMMMMMMMMMMMMMMMXMMM,1,8,rc,0,0,0.6,0.00666555892617407,0,,-494,-471
+rs33915496,23,18,41,minus,GAAGATATCCCTCACTAATA NGG,NA,NA,,NA,NA,24 16 40 20,44.3478,0,48.2619,NA,ENSG00000206306::HLA-DRB1,100193,100216,MMMMMMMMMMMMMMMMMMMMMMM,0,4,rc,0,0,0.3,0.0533990275830432,0.059698036,,-482,-459
+rs33915496,23,18,41,minus,GAAGATATCCCTCACTAATA NGG,NA,NA,,NA,NA,24 16 40 20,44.3478,0,48.2619,NA,6,32616195,32616218,MMMMMMMMMMMMMMMMMMMMMMM,0,4,rc,0,0,0.3,0.0533990275830432,0.059698036,,-482,-459
+rs33915496,23,18,41,minus,GAAGATATCCCTCACTAATA NGG,NA,NA,,NA,NA,24 16 40 20,44.3478,0,48.2619,NA,ENSG00000206240::HLA-DRB1,100558,100581,MMMMMMMMMMMMMMMMMMMMMMM,0,4,rc,0,0,0.3,0.0533990275830432,0.059698036,,-482,-459
+rs33915496,23,18,41,minus,GAAGATATCCCTCACTAATA NGG,NA,NA,,NA,NA,24 16 40 20,44.3478,0,48.2619,NA,ENSG00000228080::HLA-DRB1,167090,167113,MMMMMMMXMMMMMMMMMMMMMMM,1,4,rc,0,0,0.3,0.0533990275830432,0.059698036,,-482,-459
+rs2858331,23,2,25,plus,GAATTGAATACATTATCAAA NGG,NA,NA,,NA,NA,40 12 28 20,100,0,53.8666,NA,6,4012234,4012257,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.3,0,0.3933331256,,-498,-475
+rs510205,23,18,41,plus,GTTACAATTAAAGCAAACAT NGG,NA,NA,,NA,NA,40 20 20 20,100,0,69.371,NA,ENSG00000230648::RP3-406P24.3,127,150,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.457293963952927,0.5112572396,,-482,-459
+rs149839148,23,4,27,plus,GATACGGCTGCTTCCTCCCC NGG,NA,NA,,NA,NA,8 40 28 24,100,0,61.9607,NA,6,3813304,3813327,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.0715153268687254,0.3265245296,,-496,-473
+rs149839148,23,22,45,minus,GTCACCAGAGGAAAGCAGCC NGG,NA,NA,,NA,NA,4 36 36 24,84.3478,0,58.4183,NA,6,3813322,3813345,MMMMMMMMMMMMMMMMMMMMMMM,0,2,rc,0,0,0.6,0.170718616379226,0.150200272,,-478,-455
+rs149839148,23,22,45,minus,GTCACCAGAGGAAAGCAGCC NGG,NA,NA,,NA,NA,4 36 36 24,84.3478,0,58.4183,NA,ENSG00000256069::A2MP1,16529,16552,MMMMMMMMMMMMMMMMMMXMMMM,1,2,fw,0,0,0.6,0.170718616379226,0.150200272,,-478,-455
+rs9275111,23,18,41,plus,GGCTTCGGTACAGGACAGGT NGG,NA,NA,,NA,NA,20 16 16 48,100,0,62.9636,NA,ENSG00000185689::C6orf201,22272,22295,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.169329340514266,0.2788553432,,-482,-459
+rs9275111,23,17,40,plus,GGGCTTCGGTACAGGACAGG NGG,NA,NA,,NA,NA,20 16 16 48,100,0,60.3708,NA,ENSG00000185689::C6orf201,22271,22294,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.0661332501233323,0.3524100384,,-483,-460
+rs9275111,23,9,32,plus,GTTGCAGGGGGCTTCGGTAC NGG,NA,NA,,NA,NA,16 20 20 44,100,0,54.8742,NA,ENSG00000185689::C6orf201,22263,22286,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0145190261461364,0.2291927528,,-491,-468
+rs9275111,23,7,30,plus,GACTACATCTTGGCTCTTCA NGG,NA,NA,,NA,NA,16 28 32 24,100,0,57.8867,NA,6,3876228,3876251,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.323544177451819,-0.0292084504,,-493,-470
+rs9275111,23,6,29,plus,GGACTACATCTTGGCTCTTC NGG,NA,NA,,NA,NA,16 28 28 28,100,0,48.5434,NA,6,3876227,3876250,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.00983359899572342,-0.1826616372,,-494,-471
+rs1980493,23,19,42,plus,GCAACCCACGCGAAGGGTGT NGG,NA,NA,,NA,NA,28 24 12 36,100,0,55.2535,NA,6,3700414,3700437,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.0711569123079726,0.1915184084,,-481,-458
+rs2858331,23,23,46,minus,GGAGGAGGTGCTGGGCCCAA NGG,NA,NA,,NA,NA,8 52 20 20,100,0,75.94,NA,6,3957581,3957604,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.622520012646236,0.37448238,,-477,-454
+rs2858331,23,8,31,plus,GCTCTAAATGGGCTGCCCTT NGG,NA,NA,,NA,NA,12 32 24 32,100,0,68.4581,NA,6,3957596,3957619,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.536633115940291,0.186276032,,-492,-469
+rs3806157,23,9,32,plus,GCTGAGCAGGGGATGAGGTT NGG,NA,NA,,NA,NA,20 8 16 56,100,0,56.1312,NA,6,3721936,3721959,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.10877163149347,0.19779111,,-491,-468
+rs3806157,23,8,31,plus,GGCTGAGCAGGGGATGAGGT NGG,NA,NA,,NA,NA,16 8 16 60,100,0,54.235,NA,6,3721935,3721958,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0420905725276714,0.1696629532,,-492,-469
+rs33915496,23,7,30,plus,GCTGCCTCTCCCAGCACTGC NGG,NA,NA,,NA,NA,12 44 20 24,100,0,56.934,NA,ENSG00000238158::RP11-420L9.4,22618,22641,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.0806733643585056,0.1660272476,,-493,-470
+rs33915496,23,1,24,plus,GCCCGAAGCCAGCCTCGGGC NGG,NA,NA,,NA,NA,20 36 8 36,100,0,61.6759,NA,6,4018248,4018271,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0,0.283798518,,-499,-476
+rs3806157,23,4,27,minus,GCTTGGAAATGAGACGTGTG NGG,NA,NA,,NA,NA,28 44 20 8,100,0,54.0891,NA,6,3629049,3629072,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.104457308303407,0,,-496,-473
+rs9275614,23,11,34,minus,GAAATCAGCTTGTTCACAGT NGG,NA,NA,,NA,NA,24 32 28 16,100,0,56.54,NA,ENSG00000260604::RP1-140K8.5,5796,5819,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.107128515787324,0.219875164,,-489,-466
+rs9275614,23,0,23,minus,GTTCACAGTGGGGCCAGAGC NGG,NA,NA,,NA,NA,24 40 16 20,100,0,54,NA,ENSG00000260604::RP1-140K8.5,5785,5808,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0,0,,-500,-477
+rs9268840,23,12,35,minus,GATTATTTGTTTCAGACAGA NGG,NA,NA,,NA,NA,36 28 28 8,100,0,59.6637,NA,6,3765266,3765289,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.5,0.222149656155558,0.2610386996,,-488,-465
+rs9275614,23,13,36,plus,GCAGGAGCCTGGGGCATGGG NGG,NA,NA,,NA,NA,12 20 8 60,100,0,67.7694,NA,ENSG00000254821::RP3-400B16.4,346,369,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.231263277405128,0.3572085564,,-487,-464
+rs9275614,23,2,25,plus,GCAGAGCCCAGGCAGGAGCC NGG,NA,NA,,NA,NA,20 28 4 48,100,0,58.4324,NA,ENSG00000254821::RP3-400B16.4,335,358,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0,0.2216216832,,-498,-475
+rs9275614,23,26,49,plus,GCATGGGCGGGGCCAGGGTT NGG,NA,NA,,NA,NA,8 16 12 62,100,0,54,NA,ENSG00000254821::RP3-400B16.4,359,382,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0,0,,-474,-451
+rs9275614,23,25,48,plus,GGCATGGGCGGGGCCAGGGT NGG,NA,NA,,NA,NA,8 16 12 64,84.3478,0,54,NA,ENSG00000130164::LDLR,16238,16261,MMXMMMMMMMMMMMMMMMMMMMM,1,2,fw,0,0,0.7,0,0,,-475,-452
+rs9275614,23,25,48,plus,GGCATGGGCGGGGCCAGGGT NGG,NA,NA,,NA,NA,8 16 12 64,84.3478,0,54,NA,ENSG00000254821::RP3-400B16.4,358,381,MMMMMMMMMMMMMMMMMMMMMMM,0,2,fw,0,0,0.7,0,0,,-475,-452
+rs510205,23,2,25,plus,GAAGAAACGTTTACTGAGAA NGG,NA,NA,,NA,NA,44 12 16 28,100,0,51.4891,NA,ENSG00000112739::PRPF4B,8410,8433,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.4,0,0.1744578756,,-498,-475
+rs482044,23,18,41,plus,GGCTGTGGAGATTAGAAGTT NGG,NA,NA,,NA,NA,24 4 28 44,100,0,54.0798,NA,ENSG00000230648::RP3-406P24.3,2200,2223,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.3,0.323904056324927,0.080086562,,-482,-459
+rs9275111,23,9,32,plus,GTGGCCTGTTAATACTTGGG NGG,NA,NA,,NA,NA,16 12 32 40,100,0,62.885,NA,6,3919152,3919175,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.293926339916752,0.3503245868,,-491,-468
+rs9275111,23,6,29,plus,GTGGTGGCCTGTTAATACTT NGG,NA,NA,,NA,NA,16 12 32 40,100,0,54.7018,NA,6,3919149,3919172,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.3,0.210194895454764,0.224898862,,-494,-471
+rs3957148,23,11,34,minus,GAGAAGCGCACACATCCTGA NGG,NA,NA,,NA,NA,8 36 32 24,100,0,74.5797,NA,ENSG00000260604::RP1-140K8.5,3676,3699,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.752079540239029,0.3769096996,,-489,-466
+rs33915496,23,26,49,minus,GGAGATAACAAGATAATATA NGG,NA,NA,,NA,NA,20 25 50 4,100,0,43.9895,NA,ENSG00000112739::PRPF4B,7701,7724,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.1,0,0.0994758188,,-474,-451
+rs1980493,23,15,38,minus,GCATAACTATAAGCCAGGCA NGG,NA,NA,,NA,NA,16 24 36 24,100,0,77.2835,NA,6,3711347,3711370,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.8,0.700890785674494,0.3632864108,,-485,-462
+rs9268840,23,7,30,minus,GGGGTTCCATTCCTTACAGT NGG,NA,NA,,NA,NA,36 32 12 20,100,0,59.1361,NA,6,3801893,3801916,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.4,0.405213140627489,0.1515937956,,-493,-470
+rs9268840,23,26,49,minus,GGGTGAGCCCTGTCAGTTGG NGG,NA,NA,,NA,NA,25 50 8 16,100,0,58.2814,NA,6,3801912,3801935,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0,0.3140743312,,-474,-451
+rs9268840,23,18,41,plus,GAATGGAACCCCCAACTGAC NGG,NA,NA,,NA,NA,32 32 8 28,100,0,54.3649,NA,6,3801904,3801927,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0578594804976246,0.1603900928,,-482,-459
+rs3957148,23,2,25,plus,GTGGCAAACTCCTGCCGACA NGG,NA,NA,,NA,NA,24 32 12 32,100,0,57.7883,NA,6,3958442,3958465,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0,0.1894166876,,-498,-475
+rs3957148,23,26,49,plus,GACAGCTAGTTAGTGATTCA NGG,NA,NA,,NA,NA,29 16 25 29,100,0,50,NA,6,3958466,3958489,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0,0,,-474,-451
+rs9275111,23,25,48,minus,GGACAACTCAAAGCTGGAGT NGG,NA,NA,,NA,NA,12 40 28 20,68.6956,0,61.227,NA,6,3973815,3973838,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0,0.3613518244,,-475,-452
+rs9275111,23,25,48,minus,GGACAACTCAAAGCTGGAGT NGG,NA,NA,,NA,NA,12 40 28 20,68.6956,0,61.227,NA,ENSG00000065615::CYB5R4,96709,96732,MMMMMMMMMMMMMMMMMMXMMMM,1,3,fw,0,0,0.7,0,0.3613518244,,-475,-452
+rs9275111,23,25,48,minus,GGACAACTCAAAGCTGGAGT NGG,NA,NA,,NA,NA,12 40 28 20,68.6956,0,61.227,NA,X,50114051,50114074,MMMMMMMMMMMMMMMMMXMMMMM,1,3,fw,0,0,0.7,0,0.3613518244,,-475,-452
+rs9275111,23,24,47,minus,GACAACTCAAAGCTGGAGTG NGG,NA,NA,,NA,NA,12 44 28 16,68.6956,0,58.2517,NA,6,3973814,3973837,MMMMMMMMMMMMMMMMMMMMMMM,0,3,rc,0,0,0.7,0,0.2125869416,,-476,-453
+rs9275111,23,24,47,minus,GACAACTCAAAGCTGGAGTG NGG,NA,NA,,NA,NA,12 44 28 16,68.6956,0,58.2517,NA,ENSG00000065615::CYB5R4,96710,96733,MMMMMMMMMMMMMMMMMXMMMMM,1,3,fw,0,0,0.7,0,0.2125869416,,-476,-453
+rs9275111,23,24,47,minus,GACAACTCAAAGCTGGAGTG NGG,NA,NA,,NA,NA,12 44 28 16,68.6956,0,58.2517,NA,X,50114052,50114075,MMMMMMMMMMMMMMMMXMMMMMM,1,3,fw,0,0,0.7,0,0.2125869416,,-476,-453
+rs9275111,23,26,49,minus,GGGACAACTCAAAGCTGGAG NGG,NA,NA,,NA,NA,12 37 29 20,37.3913,0,56.7829,NA,7,15127057,15127080,MMMMXMMMMMMMMMMMMMMMMMM,1,5,rc,0,0,0.6,0,0.2391493024,,-474,-451
+rs9275111,23,26,49,minus,GGGACAACTCAAAGCTGGAG NGG,NA,NA,,NA,NA,12 37 29 20,37.3913,0,56.7829,NA,16,87874523,87874546,MMMMMMMXMMMMMMMMMMMMMMM,1,5,rc,0,0,0.6,0,0.2391493024,,-474,-451
+rs9275111,23,26,49,minus,GGGACAACTCAAAGCTGGAG NGG,NA,NA,,NA,NA,12 37 29 20,37.3913,0,56.7829,NA,4,95933225,95933248,MMMMMMMXMMMMMMMMMMMMMMM,1,5,rc,0,0,0.6,0,0.2391493024,,-474,-451
+rs9275111,23,26,49,minus,GGGACAACTCAAAGCTGGAG NGG,NA,NA,,NA,NA,12 37 29 20,37.3913,0,56.7829,NA,6,3973816,3973839,MMMMMMMMMMMMMMMMMMMMMMM,0,5,rc,0,0,0.6,0,0.2391493024,,-474,-451
+rs9275111,23,26,49,minus,GGGACAACTCAAAGCTGGAG NGG,NA,NA,,NA,NA,12 37 29 20,37.3913,0,56.7829,NA,X,50114050,50114073,MMMMMMMMMMMMMMMMMMXMMMM,1,5,fw,0,0,0.6,0,0.2391493024,,-474,-451
+rs620490,23,6,29,plus,GTTGGCTTTCAATTCTTGGT NGG,NA,NA,,NA,NA,8 12 44 36,100,0,50.8104,NA,ENSG00000253496::RP11-13N12.1,163146,163169,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0.0705673344744407,0.0699545856,,-494,-471
+rs620490,23,27,50,plus,GGGGATTGAGTGGGCAGAAT NGG,NA,NA,,NA,NA,21 4 21 52,100,0,50,NA,ENSG00000253496::RP11-13N12.1,163167,163190,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0,0,,-473,-450
+rs3935067,23,4,27,plus,GATGAATGGATCTCAGATTG NGG,NA,NA,,NA,NA,32 8 28 32,100,0,54.2175,NA,ENSG00000146904::EPHA1,16928,16951,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.4,0.0693868466866779,0.2414914832,,-496,-473
+rs485902,23,24,47,minus,GGGCAAGTGCCCCAAGAGGT NGG,NA,NA,,NA,NA,12 44 20 24,100,0,59.13,NA,8,27632420,27632443,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0,0.3565037168,,-476,-453
+rs485902,23,13,36,plus,GACATTGAAAGCCCACCTCT NGG,NA,NA,,NA,NA,24 28 20 28,100,0,55.1023,NA,8,27632431,27632454,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.0353555891332848,0.1197619152,,-487,-464
+rs755951,23,14,37,minus,GTCCCCCTACATGCCAGTGA NGG,NA,NA,,NA,NA,16 28 24 32,100,0,59.4649,NA,ENSG00000120899::PTK2B,57780,57803,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.6,0.0660585905284884,0.3071886604,,-486,-463
+rs755951,23,10,33,plus,GATCCCTTCACTGGCATGTA NGG,NA,NA,,NA,NA,16 24 24 36,100,0,53.8968,NA,ENSG00000120899::PTK2B,57776,57799,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.165700283188639,-0.0708577208,,-490,-467
+rs755951,23,9,32,plus,GGATCCCTTCACTGGCATGT NGG,NA,NA,,NA,NA,16 24 24 36,100,0,52.1868,NA,ENSG00000120899::PTK2B,57775,57798,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0343462233905417,0.0749939812,,-491,-468
+rs4732729,23,8,31,plus,GCTTGGGAACAGAATCACCG NGG,NA,NA,,NA,NA,28 20 12 40,100,0,81.6952,NA,ENSG00000120885::CLU,7041,7064,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.6,0.92624870041552,0.558514186,,-492,-469
+rs4732729,23,19,42,plus,GAATCACCGGGGAGTCCCAG NGG,NA,NA,,NA,NA,24 24 8 44,100,0,68.7839,NA,ENSG00000120885::CLU,7052,7075,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.389678189948683,0.3495215912,,-481,-458
+rs4732729,23,6,29,plus,GCGCTTGGGAACAGAATCAC NGG,NA,NA,,NA,NA,24 24 12 40,100,0,56.8735,NA,ENSG00000120885::CLU,7039,7062,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0956763845871986,0.2480034592,,-494,-471
+rs4732729,23,25,48,minus,GTCATCCCCCTGGGACTCCC NGG,NA,NA,,NA,NA,16 24 16 44,100,0,54.7839,NA,ENSG00000120885::CLU,7058,7081,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.8,0,-0.0608021040000001,,-475,-452
+rs4879515,23,6,29,plus,GAGACCTAACATTAAAGGAC NGG,NA,NA,,NA,NA,44 16 12 28,100,0,58.2855,NA,ENSG00000120162::MOB3B,157009,157032,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.5,0.0964009857057933,0.3178746224,,-494,-471
+rs112136718,23,19,42,minus,GTGGACGTGGCCTACCGCTG NGG,NA,NA,,NA,NA,16 40 8 36,100,0,67.1122,NA,ENSG00000261150::EPPK1,10807,10830,MMMMMMMMMMMMMMMMMMMMMMM,0,1,rc,0,0,0.7,0.150319990025795,0.505293164,,-481,-458
+rs112136718,23,9,32,plus,GTCGAAGTAGCCGCAGCGGT NGG,NA,NA,,NA,NA,20 28 12 40,100,0,65.4369,NA,ENSG00000261150::EPPK1,10797,10820,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.173457087379942,0.3983908496,,-491,-468
+rs112136718,23,21,44,plus,GCAGCGGTAGGCCACGTCCA NGG,NA,NA,,NA,NA,16 36 8 40,100,0,62.6598,NA,ENSG00000261150::EPPK1,10809,10832,MMMMMMMMMMMMMMMMMMMMMMM,0,1,fw,0,0,0.7,0.432990147111591,0,,-479,-456

data/GuideScan2/GuideScan2_30bp_NGG-.csv

@@ -0,0 +1,317 @@
+Region-name,gRNA-ID,gRNA-Seq,Target-Seq,PAM,Number of off-targets,Off-target summary,Cutting efficiency,Specificity,Rank,Coordinates,Strand,Annotations
+chr1:152220435-152220465,chr1:152220435-152220465.0,GACGTGAGCTGGAGCCATGT,GACGTGAGCTGGAGCCATGT,NGG,18,2:0 | 3:18,0.602148,0.29527,1,NC_000001.11:152220443-152220465,+,hornerin
+chr1:155135675-155135705,chr1:155135675-155135705.0,AGAGGTCTGGACCAGGGTAC,AGAGGTCTGGACCAGGGTAC,NGG,26,2:0 | 3:26,0.361226,0.28323,1,NC_000001.11:155135677-155135699,+,
+chr1:155135675-155135705,chr1:155135675-155135705.1,GAGGTCTGGACCAGGGTACT,GAGGTCTGGACCAGGGTACT,NGG,38,2:1 | 3:37,0.500068,0.188367,2,NC_000001.11:155135678-155135700,+,
+chr1:155135675-155135705,chr1:155135675-155135705.2,TCTGGACCAGGGTACTGGGA,TCTGGACCAGGGTACTGGGA,NGG,53,2:0 | 3:53,0.564113,0.0963628,3,NC_000001.11:155135682-155135704,+,
+chr1:156102410-156102440,chr1:156102410-156102440.0,TGGTTCTGTCACCTCTGGTT,TGGTTCTGTCACCTCTGGTT,NGG,37,2:1 | 3:36,0.425775,0.231612,1,NC_000001.11:156102415-156102437,+,
+chr1:156102410-156102440,chr1:156102410-156102440.1,TAACCAGAGGTGACAGAACC,GGTTCTGTCACCTCTGGTTA,NGG,39,2:0 | 3:39,0.503448,0.196528,2,NC_000001.11:156102413-156102435,-,
+chr1:156102410-156102440,chr1:156102410-156102440.2,AGTCCTGGTTCTGTCACCTC,AGTCCTGGTTCTGTCACCTC,NGG,62,2:3 | 3:59,0.413392,0.181194,3,NC_000001.11:156102410-156102432,+,
+chr10:11676698-11676728,chr10:11676698-11676728.0,GAAGTGCTTACCGCATATCC,GAAGTGCTTACCGCATATCC,NGG,3,2:0 | 3:3,0.5317,0.566244,1,NC_000010.11:11676700-11676722,+,
+chr10:119612800-119612830,chr10:119612800-119612830.0,CAGGCGCCCGCCACCTGTTC,GAACAGGTGGCGGGCGCCTG,NGG,2708,2:53 | 3:2655,0.287138,0.00641668,1,NC_000010.11:119612803-119612825,-,
+chr11:47395616-47395646,chr11:47395616-47395646.0,TCATGGCTATAATAAATCAA,TCATGGCTATAATAAATCAA,NGG,60,2:3 | 3:57,0.513797,0.144882,1,NC_000011.10:47395624-47395646,+,"Spi-1 proto-oncogene, transcript variant X1"
+chr11:60184827-60184857,chr11:60184827-60184857.0,TTCTACCAACCTAACTACAA,TTCTACCAACCTAACTACAA,NGG,15,2:0 | 3:15,0.653775,0.399656,1,NC_000011.10:60184833-60184855,+,
+chr11:60184827-60184857,chr11:60184827-60184857.1,ATTCTACCAACCTAACTACA,ATTCTACCAACCTAACTACA,NGG,30,2:0 | 3:30,0.550719,0.220943,2,NC_000011.10:60184832-60184854,+,
+chr11:86132139-86132169,chr11:86132139-86132169.0,TGACCAGGCCCGGCCGGGCA,TGCCCGGCCGGGCCTGGTCA,NGG,65,2:6 | 3:59,0.526278,0.0755237,1,NC_000011.10:86132147-86132169,-,
+chr11:121564862-121564892,chr11:121564862-121564892.0,TAAAATACTCTATTACCGGC,GCCGGTAATAGAGTATTTTA,NGG,13,2:0 | 3:13,0.47751,0.238824,1,NC_000011.10:121564867-121564889,-,
+chr11:121564862-121564892,chr11:121564862-121564892.1,AAAATACTCTATTACCGGCT,AGCCGGTAATAGAGTATTTT,NGG,31,2:0 | 3:31,0.51914,0.156044,2,NC_000011.10:121564866-121564888,-,
+chr11:133902927-133902957,chr11:133902927-133902957.0,TGGGGTTTTCATATAAGCCA,TGGCTTATATGAAAACCCCA,NGG,25,2:0 | 3:25,0.527661,0.273097,1,NC_000011.10:133902933-133902955,-,immunoglobulin superfamily member 9B
+chr11:133902927-133902957,chr11:133902927-133902957.1,GTTTTCATATAAGCCATGGG,CCCATGGCTTATATGAAAAC,NGG,31,2:0 | 3:31,0.689368,0.279263,2,NC_000011.10:133902929-133902951,-,immunoglobulin superfamily member 9B
+chr11:133902927-133902957,chr11:133902927-133902957.2,GGGGTTTTCATATAAGCCAT,ATGGCTTATATGAAAACCCC,NGG,35,2:2 | 3:33,0.589318,0.213089,3,NC_000011.10:133902932-133902954,-,immunoglobulin superfamily member 9B
+chr11:133902927-133902957,chr11:133902927-133902957.3,TTTCATATAAGCCATGGGAG,CTCCCATGGCTTATATGAAA,NGG,38,2:0 | 3:38,0.537071,0.164118,4,NC_000011.10:133902927-133902949,-,immunoglobulin superfamily member 9B
+chr11:133902927-133902957,chr11:133902927-133902957.4,TTTTCATATAAGCCATGGGA,TCCCATGGCTTATATGAAAA,NGG,48,2:1 | 3:47,0.586167,0.139321,5,NC_000011.10:133902928-133902950,-,immunoglobulin superfamily member 9B
+chr11:133949506-133949536,chr11:133949506-133949536.0,GTTTGGTTTCCCCCTGTATT,AATACAGGGGGAAACCAAAC,NGG,21,2:1 | 3:20,0.19908,0.349993,1,NC_000011.10:133949510-133949532,-,
+chr11:133949506-133949536,chr11:133949506-133949536.1,TTTGGTTTCCCCCTGTATTT,AAATACAGGGGGAAACCAAA,NGG,130,2:1 | 3:129,0.312179,0.0515104,2,NC_000011.10:133949509-133949531,-,
+chr12:40226990-40227020,chr12:40226990-40227020.0,AGTGCTATACTTGACAACCC,AGTGCTATACTTGACAACCC,NGG,9,2:0 | 3:9,0.701704,0.591361,1,NC_000012.12:40226992-40227014,+,
+chr12:40226990-40227020,chr12:40226990-40227020.1,GTGCTATACTTGACAACCCA,GTGCTATACTTGACAACCCA,NGG,14,2:0 | 3:14,0.614097,0.49424,2,NC_000012.12:40226993-40227015,+,
+chr12:40226990-40227020,chr12:40226990-40227020.2,TGCTATACTTGACAACCCAG,TGCTATACTTGACAACCCAG,NGG,14,2:0 | 3:14,0.749446,0.359774,3,NC_000012.12:40226994-40227016,+,
+chr12:40491731-40491761,chr12:40491731-40491761.0,ATTCGTCTTACGATCATAAT,ATTATGATCGTAAGACGAAT,NGG,0,2:0 | 3:0,0.191562,0.995923,1,NC_000012.12:40491736-40491758,-,
+chr12:41036413-41036443,chr12:41036413-41036443.0,TTAGAGAACCAAGCCAAATG,TTAGAGAACCAAGCCAAATG,NGG,107,2:5 | 3:102,0.601051,0.0924406,1,NC_000012.12:41036416-41036438,+,
+chr12:41195597-41195627,chr12:41195597-41195627.0,ATAAATCAAAGTTTTTTTTT,AAAAAAAAACTTTGATTTAT,NGG,551,2:35 | 3:516,0.124,0.0157566,1,NC_000012.12:41195603-41195625,-,
+chr12:56922803-56922833,chr12:56922803-56922833.0,GTGTTAAGTTACTTATTCTA,GTGTTAAGTTACTTATTCTA,NGG,48,2:0 | 3:48,0.29911,0.16097,1,NC_000012.12:56922804-56922826,+,
+chr12:64455920-64455950,chr12:64455920-64455950.0,GCTACTGCAAATGTCTTTCG,GCTACTGCAAATGTCTTTCG,NGG,12,2:0 | 3:12,0.541531,0.413703,1,NC_000012.12:64455925-64455947,+,"TANK binding kinase 1, transcript variant X3"
+chr12:64555452-64555482,chr12:64555452-64555482.0,ATAGAAAGCCTCTACCGGCC,ATAGAAAGCCTCTACCGGCC,NGG,12,2:0 | 3:12,0.613849,0.417137,1,NC_000012.12:64555452-64555474,+,
+chr12:64555452-64555482,chr12:64555452-64555482.1,AAGCCTCTACCGGCCGGGCA,AAGCCTCTACCGGCCGGGCA,NGG,90,2:5 | 3:85,0.566983,0.0518375,2,NC_000012.12:64555457-64555479,+,
+chr14:52845268-52845298,chr14:52845268-52845298.0,CCACGCTTCAGCTCTCTTGC,CCACGCTTCAGCTCTCTTGC,NGG,27,2:0 | 3:27,0.334898,0.162426,1,NC_000014.9:52845271-52845293,+,
+chr14:52845268-52845298,chr14:52845268-52845298.1,CAGCAAGAGAGCTGAAGCGT,ACGCTTCAGCTCTCTTGCTG,NGG,31,2:1 | 3:30,0.623894,0.188239,2,NC_000014.9:52845270-52845292,-,
+chr14:52845268-52845298,chr14:52845268-52845298.2,CCAGCAAGAGAGCTGAAGCG,CGCTTCAGCTCTCTTGCTGG,NGG,36,2:2 | 3:34,0.612947,0.175732,3,NC_000014.9:52845271-52845293,-,
+chr14:52951105-52951135,chr14:52951105-52951135.0,CCCCTCTGTCCGAGCCTGGC,CCCCTCTGTCCGAGCCTGGC,NGG,25,2:0 | 3:25,0.275128,0.241697,1,NC_000014.9:52951107-52951129,+,
+chr14:52951105-52951135,chr14:52951105-52951135.1,CCAGCCAGGCTCGGACAGAG,CTCTGTCCGAGCCTGGCTGG,NGG,36,2:0 | 3:36,0.635084,0.201945,2,NC_000014.9:52951107-52951129,-,
+chr14:52951105-52951135,chr14:52951105-52951135.2,TGTCCGAGCCTGGCTGGGCT,TGTCCGAGCCTGGCTGGGCT,NGG,51,2:0 | 3:51,0.356169,0.133692,3,NC_000014.9:52951113-52951135,+,
+chr14:52951105-52951135,chr14:52951105-52951135.3,CTGTCCGAGCCTGGCTGGGC,CTGTCCGAGCCTGGCTGGGC,NGG,56,2:2 | 3:54,0.213404,0.0788235,4,NC_000014.9:52951112-52951134,+,
+chr15:50529045-50529075,chr15:50529045-50529075.0,CTCCATGCTTTCTTTCCTTC,CTCCATGCTTTCTTTCCTTC,NGG,164,2:15 | 3:149,0.279124,0.0512295,1,NC_000015.10:50529046-50529068,+,
+chr15:63277687-63277717,chr15:63277687-63277717.0,ACGCAACGGCTCGGTGGCGA,TCGCCACCGAGCCGTTGCGT,NGG,1,2:0 | 3:1,0.491463,0.50564,1,NC_000015.10:63277694-63277716,-,"aph-1 homolog B, gamma-secretase subunit, transcript variant X1"
+chr16:30926462-30926492,chr16:30926462-30926492.0,AGTAGGGATCGGGGAAGCAT,AGTAGGGATCGGGGAAGCAT,NGG,22,2:3 | 3:19,0.524281,0.228575,1,NC_000016.10:30926468-30926490,+,
+chr16:30926462-30926492,chr16:30926462-30926492.1,CAGTAGGGATCGGGGAAGCA,CAGTAGGGATCGGGGAAGCA,NGG,34,2:1 | 3:33,0.475818,0.17063,2,NC_000016.10:30926467-30926489,+,
+chr17:1771637-1771667,chr17:1771637-1771667.0,CAGGAGACGGTGGGAGGGGC,CAGGAGACGGTGGGAGGGGC,NGG,148,2:6 | 3:142,0.323014,0.0361961,1,NC_000017.11:1771639-1771661,+,
+chr17:1771637-1771667,chr17:1771637-1771667.1,AGGAGACGGTGGGAGGGGCA,AGGAGACGGTGGGAGGGGCA,NGG,180,2:12 | 3:168,0.517869,0.0335897,2,NC_000017.11:1771640-1771662,+,
+chr17:1771637-1771667,chr17:1771637-1771667.2,AGACGGTGGGAGGGGCAGGG,AGACGGTGGGAGGGGCAGGG,NGG,344,2:21 | 3:323,0.47525,0.0181051,3,NC_000017.11:1771643-1771665,+,
+chr17:1771637-1771667,chr17:1771637-1771667.3,GACGGTGGGAGGGGCAGGGA,GACGGTGGGAGGGGCAGGGA,NGG,520,2:35 | 3:485,0.424246,0.0128358,4,NC_000017.11:1771644-1771666,+,
+chr19:1032674-1032704,chr19:1032674-1032704.0,TCGCCCTGGCGGGGAAGGTG,TCGCCCTGGCGGGGAAGGTG,NGG,35,2:4 | 3:31,0.505068,0.165802,1,NC_000019.10:1032680-1032702,+,"calponin 2, transcript variant 4"
+chr19:1042794-1042824,chr19:1042794-1042824.0,GGCCGCTGAGGACCTGGCCC,GGCCGCTGAGGACCTGGCCC,NGG,65,2:1 | 3:64,0.479399,0.076691,1,NC_000019.10:1042802-1042824,+,"ATP binding cassette subfamily A member 7, transcript variant X11"
+chr19:44516782-44516812,chr19:44516782-44516812.0,TGTTGAATCCCAACCCCTAG,CTAGGGGTTGGGATTCAACA,NGG,13,2:0 | 3:13,0.63367,0.405722,1,NC_000019.10:44516786-44516808,-,
+chr19:44544847-44544877,chr19:44544847-44544877.0,GATCACCCTGGGTGTAATGC,GCATTACACCCAGGGTGATC,NGG,6,2:0 | 3:6,0.515971,0.650778,1,NC_000019.10:44544848-44544870,-,
+chr19:44658282-44658312,chr19:44658282-44658312.0,GGGCTCCAACCTTGTAACCC,GGGCTCCAACCTTGTAACCC,NGG,22,2:0 | 3:22,0.638003,0.356184,1,NC_000019.10:44658287-44658309,+,
+chr19:44658282-44658312,chr19:44658282-44658312.1,GGTTACAAGGTTGGAGCCCC,GGGGCTCCAACCTTGTAACC,NGG,28,2:0 | 3:28,0.364217,0.298059,2,NC_000019.10:44658283-44658305,-,
+chr19:44658905-44658935,chr19:44658905-44658935.0,GTGCTCAATTACGGCAGCTC,GAGCTGCCGTAATTGAGCAC,NGG,12,2:0 | 3:12,0.451213,0.506361,1,NC_000019.10:44658911-44658933,-,
+chr19:44663668-44663698,chr19:44663668-44663698.0,AAGCAAGACGCTAAATGAAG,AAGCAAGACGCTAAATGAAG,NGG,34,2:0 | 3:34,0.614684,0.133602,1,NC_000019.10:44663676-44663698,+,"PVR cell adhesion molecule, transcript variant 1"
+chr19:44684014-44684044,chr19:44684014-44684044.0,GGGAAGGGGTCCAGCAGCCG,CGGCTGCTGGACCCCTTCCC,NGG,56,2:0 | 3:56,0.564831,0.0727178,1,NC_000019.10:44684020-44684042,-,"CEA cell adhesion molecule 19, transcript variant 3"
+chr19:44697240-44697270,chr19:44697240-44697270.0,GCTCTGAGGCAGGCCCGGCA,GCTCTGAGGCAGGCCCGGCA,NGG,66,2:9 | 3:57,0.567964,0.108176,1,NC_000019.10:44697240-44697262,+,
+chr19:44698766-44698796,chr19:44698766-44698796.0,TCTTATGACCTGCATCCTGA,TCAGGATGCAGGTCATAAGA,NGG,39,2:3 | 3:36,0.536574,0.212502,1,NC_000019.10:44698766-44698788,-,
+chr19:44723875-44723905,chr19:44723875-44723905.0,TTCACCCTGCATGTGGCAGC,GCTGCCACATGCAGGGTGAA,NGG,36,2:1 | 3:35,0.286124,0.185404,1,NC_000019.10:44723880-44723902,-,
+chr19:44723875-44723905,chr19:44723875-44723905.1,ACCCTGCATGTGGCAGCTGG,CCAGCTGCCACATGCAGGGT,NGG,39,2:5 | 3:34,0.5102,0.154711,2,NC_000019.10:44723877-44723899,-,
+chr19:44723875-44723905,chr19:44723875-44723905.2,TCACCCTGCATGTGGCAGCT,AGCTGCCACATGCAGGGTGA,NGG,40,2:1 | 3:39,0.419078,0.200219,3,NC_000019.10:44723879-44723901,-,
+chr19:44723875-44723905,chr19:44723875-44723905.3,GCTGCCACATGCAGGGTGAA,GCTGCCACATGCAGGGTGAA,NGG,50,2:4 | 3:46,0.474436,0.10863,4,NC_000019.10:44723883-44723905,+,
+chr19:44723875-44723905,chr19:44723875-44723905.4,CACCCTGCATGTGGCAGCTG,CAGCTGCCACATGCAGGGTG,NGG,53,2:2 | 3:51,0.407736,0.127428,5,NC_000019.10:44723878-44723900,-,
+chr19:44723875-44723905,chr19:44723875-44723905.5,CTCCCCCAGCTGCCACATGC,CTCCCCCAGCTGCCACATGC,NGG,59,2:2 | 3:57,0.449521,0.153312,6,NC_000019.10:44723875-44723897,+,
+chr19:44723875-44723905,chr19:44723875-44723905.6,TCCCCCAGCTGCCACATGCA,TCCCCCAGCTGCCACATGCA,NGG,61,2:5 | 3:56,0.542966,0.183254,7,NC_000019.10:44723876-44723898,+,
+chr19:44737976-44738005,chr19:44737976-44738005.0,GGCACCGACTTCCAGGGAAA,GGCACCGACTTCCAGGGAAA,NGG,13,2:1 | 3:12,0.491937,0.309946,1,NC_000019.10:44737979-44738001,+,
+chr19:44737976-44738005,chr19:44737976-44738005.1,CCGACTTCCAGGGAAAAGGC,CCGACTTCCAGGGAAAAGGC,NGG,27,2:1 | 3:26,0.578558,0.181108,2,NC_000019.10:44737983-44738005,+,
+chr19:44737976-44738005,chr19:44737976-44738005.2,CCAGCCTTTTCCCTGGAAGT,ACTTCCAGGGAAAAGGCTGG,NGG,58,2:2 | 3:56,0.569512,0.0979795,3,NC_000019.10:44737983-44738005,-,
+chr19:44746388-44746418,chr19:44746388-44746418.0,GGGTGGAGGCGAGGTTTGGA,TCCAAACCTCGCCTCCACCC,NGG,75,2:4 | 3:71,0.541726,0.0794209,1,NC_000019.10:44746392-44746414,-,
+chr19:44746388-44746418,chr19:44746388-44746418.1,CTGAGGGTGGAGGCGAGGTT,AACCTCGCCTCCACCCTCAG,NGG,81,2:6 | 3:75,0.328527,0.142043,2,NC_000019.10:44746396-44746418,-,
+chr19:44746388-44746418,chr19:44746388-44746418.2,AGGGTGGAGGCGAGGTTTGG,CCAAACCTCGCCTCCACCCT,NGG,125,2:2 | 3:123,0.469364,0.0869157,3,NC_000019.10:44746393-44746415,-,
+chr19:44747883-44747913,chr19:44747883-44747913.0,TGTGTCTCTGCACTCGTTGG,CCAACGAGTGCAGAGACACA,NGG,13,2:1 | 3:12,0.608654,0.468392,1,NC_000019.10:44747890-44747912,-,"BCL3 transcription coactivator, transcript variant X2"
+chr19:44747883-44747913,chr19:44747883-44747913.1,TTGTGTCTCTGCACTCGTTG,CAACGAGTGCAGAGACACAA,NGG,14,2:0 | 3:14,0.560381,0.587901,2,NC_000019.10:44747891-44747913,-,"BCL3 transcription coactivator, transcript variant X2"
+chr19:44750218-44750248,chr19:44750218-44750248.0,AGTTTTCCCCGTCTGTGTGA,AGTTTTCCCCGTCTGTGTGA,NGG,26,2:0 | 3:26,0.417625,0.140488,1,NC_000019.10:44750225-44750247,+,
+chr19:44750218-44750248,chr19:44750218-44750248.1,GTTTTCCCCGTCTGTGTGAT,GTTTTCCCCGTCTGTGTGAT,NGG,29,2:2 | 3:27,0.487454,0.0978013,2,NC_000019.10:44750226-44750248,+,
+chr19:44750218-44750248,chr19:44750218-44750248.2,CACACAGACGGGGAAAACTG,CAGTTTTCCCCGTCTGTGTG,NGG,44,2:1 | 3:43,0.707197,0.0905963,3,NC_000019.10:44750221-44750243,-,
+chr19:44751993-44752023,chr19:44751993-44752023.0,TGTAAAACTATCACTGGACC,TGTAAAACTATCACTGGACC,NGG,27,2:3 | 3:24,0.581488,0.269655,1,NC_000019.10:44752001-44752023,+,
+chr19:44751993-44752023,chr19:44751993-44752023.1,TATACATGTAAAACTATCAC,TATACATGTAAAACTATCAC,NGG,65,2:3 | 3:62,0.480384,0.127407,2,NC_000019.10:44751995-44752017,+,
+chr19:44770799-44770829,chr19:44770799-44770829.0,AACTCCGTTCCCAAGGGAGG,AACTCCGTTCCCAAGGGAGG,NGG,18,2:0 | 3:18,0.553652,0.252979,1,NC_000019.10:44770804-44770826,+,
+chr19:44770799-44770829,chr19:44770799-44770829.1,AGAAACTCCGTTCCCAAGGG,AGAAACTCCGTTCCCAAGGG,NGG,38,2:0 | 3:38,0.613232,0.13982,2,NC_000019.10:44770801-44770823,+,
+chr19:44819471-44819501,chr19:44819471-44819501.0,GTCACTCACCGGTGCCGAAG,CTTCGGCACCGGTGAGTGAC,NGG,0,2:0 | 3:0,0.535063,0.980286,1,NC_000019.10:44819477-44819499,-,"basal cell adhesion molecule (Lutheran blood group), transcript variant 2"
+chr19:44820865-44820895,chr19:44820865-44820895.0,TGGAGCACGCCCGTGGGCAC,TGGAGCACGCCCGTGGGCAC,NGG,15,2:0 | 3:15,0.441348,0.455071,1,NC_000019.10:44820869-44820891,+,
+chr19:44839542-44839572,chr19:44839542-44839572.0,ACCAACTTCTCTTTACTTCC,GGAAGTAAAGAGAAGTTGGT,NGG,54,2:5 | 3:49,0.323236,0.0947512,1,NC_000019.10:44839544-44839566,-,
+chr19:44839542-44839572,chr19:44839542-44839572.1,TCCAGGAAGTAAAGAGAAGT,TCCAGGAAGTAAAGAGAAGT,NGG,111,2:14 | 3:97,0.495597,0.0805701,2,NC_000019.10:44839543-44839565,+,
+chr19:44840306-44840336,chr19:44840306-44840336.0,ATAAAACTGCGAACATAGCC,ATAAAACTGCGAACATAGCC,NGG,31,2:0 | 3:31,0.503524,0.236068,1,NC_000019.10:44840312-44840334,+,
+chr19:44848243-44848273,chr19:44848243-44848273.0,CCAAGCTAACAGTAGGCTCA,TGAGCCTACTGTTAGCTTGG,NGG,14,2:0 | 3:14,0.637052,0.301555,1,NC_000019.10:44848251-44848273,-,
+chr19:44848243-44848273,chr19:44848243-44848273.1,CTAACAGTAGGCTCAGGGTC,GACCCTGAGCCTACTGTTAG,NGG,15,2:0 | 3:15,0.543546,0.337077,2,NC_000019.10:44848246-44848268,-,
+chr19:44848243-44848273,chr19:44848243-44848273.2,CCCTGAGCCTACTGTTAGCT,CCCTGAGCCTACTGTTAGCT,NGG,26,2:1 | 3:25,0.425106,0.238931,3,NC_000019.10:44848251-44848273,+,
+chr19:44848243-44848273,chr19:44848243-44848273.3,ACAGTAGGCTCAGGGTCTGG,CCAGACCCTGAGCCTACTGT,NGG,42,2:5 | 3:37,0.4847,0.116756,4,NC_000019.10:44848243-44848265,-,
+chr19:44849146-44849176,chr19:44849146-44849176.0,GTCAGAGACACGTGTAGGAA,GTCAGAGACACGTGTAGGAA,NGG,18,2:0 | 3:18,0.523989,0.49982,1,NC_000019.10:44849149-44849171,+,
+chr19:44858373-44858403,chr19:44858373-44858403.0,CCAACATGGGCGATAGAATG,CATTCTATCGCCCATGTTGG,NGG,118,2:1 | 3:117,0.573555,0.0785796,1,NC_000019.10:44858373-44858395,-,
+chr19:44858373-44858403,chr19:44858373-44858403.1,CCTCATTCTATCGCCCATGT,CCTCATTCTATCGCCCATGT,NGG,299,2:11 | 3:288,0.558139,0.0215786,2,NC_000019.10:44858373-44858395,+,
+chr19:44860427-44860457,chr19:44860427-44860457.0,CTCACTGCAAACCGTCTCTG,CAGAGACGGTTTGCAGTGAG,NGG,31,2:0 | 3:31,0.644271,0.299969,1,NC_000019.10:44860435-44860457,-,
+chr19:44867668-44867698,chr19:44867668-44867698.0,ATGGGAGCTGGGCGCGTTCC,ATGGGAGCTGGGCGCGTTCC,NGG,10,2:0 | 3:10,0.317384,0.38124,1,NC_000019.10:44867670-44867692,+,
+chr19:44867668-44867698,chr19:44867668-44867698.1,AGCTGGGCGCGTTCCAGGAA,AGCTGGGCGCGTTCCAGGAA,NGG,31,2:0 | 3:31,0.456304,0.222805,2,NC_000019.10:44867675-44867697,+,
+chr19:44867915-44867945,chr19:44867915-44867945.0,TAGAAGGGAGCTGGGACGAG,TAGAAGGGAGCTGGGACGAG,NGG,51,2:0 | 3:51,0.44217,0.209815,1,NC_000019.10:44867915-44867937,+,
+chr19:44867915-44867945,chr19:44867915-44867945.1,AGAAGGGAGCTGGGACGAGA,AGAAGGGAGCTGGGACGAGA,NGG,101,2:6 | 3:95,0.475561,0.0581701,2,NC_000019.10:44867916-44867938,+,
+chr19:44867915-44867945,chr19:44867915-44867945.2,GAAGGGAGCTGGGACGAGAG,GAAGGGAGCTGGGACGAGAG,NGG,118,2:6 | 3:112,0.573264,0.10264,3,NC_000019.10:44867917-44867939,+,
+chr19:44872140-44872170,chr19:44872140-44872170.0,CTGTACGCTGTGAGTGTATC,CTGTACGCTGTGAGTGTATC,NGG,0,2:0 | 3:0,0.304099,1,1,NC_000019.10:44872141-44872163,+,
+chr19:44872140-44872170,chr19:44872140-44872170.1,TGTACGCTGTGAGTGTATCG,TGTACGCTGTGAGTGTATCG,NGG,2,2:0 | 3:2,0.596905,0.843431,2,NC_000019.10:44872142-44872164,+,
+chr19:44872140-44872170,chr19:44872140-44872170.2,GTACGCTGTGAGTGTATCGG,GTACGCTGTGAGTGTATCGG,NGG,2,2:0 | 3:2,0.679598,0.812772,3,NC_000019.10:44872143-44872165,+,
+chr19:44872140-44872170,chr19:44872140-44872170.3,TCTGTACGCTGTGAGTGTAT,TCTGTACGCTGTGAGTGTAT,NGG,8,2:0 | 3:8,0.430075,0.374311,4,NC_000019.10:44872140-44872162,+,
+chr19:44874871-44874901,chr19:44874871-44874901.0,TCCTCTTTGGCTCCGTGCCT,AGGCACGGAGCCAAAGAGGA,NGG,13,2:2 | 3:11,0.281656,0.308599,1,NC_000019.10:44874879-44874901,-,
+chr19:44874871-44874901,chr19:44874871-44874901.1,CTCTTTGGCTCCGTGCCTTG,CAAGGCACGGAGCCAAAGAG,NGG,17,2:0 | 3:17,0.504325,0.25066,2,NC_000019.10:44874877-44874899,-,
+chr19:44874871-44874901,chr19:44874871-44874901.2,TTGGCTCCGTGCCTTGGGGC,GCCCCAAGGCACGGAGCCAA,NGG,26,2:0 | 3:26,0.39674,0.256884,3,NC_000019.10:44874873-44874895,-,
+chr19:44874871-44874901,chr19:44874871-44874901.3,CCCAAGGCACGGAGCCAAAG,CCCAAGGCACGGAGCCAAAG,NGG,28,2:0 | 3:28,0.527442,0.185455,4,NC_000019.10:44874878-44874900,+,
+chr19:44874871-44874901,chr19:44874871-44874901.4,CCTCTTTGGCTCCGTGCCTT,AAGGCACGGAGCCAAAGAGG,NGG,38,2:0 | 3:38,0.255401,0.224494,5,NC_000019.10:44874878-44874900,-,
+chr19:44875787-44875817,chr19:44875787-44875817.0,GGGAAAACAGACACCTCTTC,GGGAAAACAGACACCTCTTC,NGG,73,2:3 | 3:70,0.401742,0.144003,1,NC_000019.10:44875791-44875813,+,
+chr19:44875787-44875817,chr19:44875787-44875817.1,AAGAGGTGTCTGTTTTCCCT,AGGGAAAACAGACACCTCTT,NGG,74,2:5 | 3:69,0.429642,0.0923168,2,NC_000019.10:44875787-44875809,-,
+chr19:44879402-44879432,chr19:44879402-44879432.0,GTTGCTGGGGGTCTCGGGAG,GTTGCTGGGGGTCTCGGGAG,NGG,32,2:0 | 3:32,0.341265,0.265947,1,NC_000019.10:44879403-44879425,+,
+chr19:44879402-44879432,chr19:44879402-44879432.1,GGTTGCTGGGGGTCTCGGGA,GGTTGCTGGGGGTCTCGGGA,NGG,48,2:0 | 3:48,0.468292,0.136766,2,NC_000019.10:44879402-44879424,+,
+chr19:44879402-44879432,chr19:44879402-44879432.2,GCTGGGGGTCTCGGGAGGGG,GCTGGGGGTCTCGGGAGGGG,NGG,175,2:8 | 3:167,0.347365,0.0425738,3,NC_000019.10:44879406-44879428,+,
+chr19:44879402-44879432,chr19:44879402-44879432.3,CTGGGGGTCTCGGGAGGGGA,CTGGGGGTCTCGGGAGGGGA,NGG,198,2:12 | 3:186,0.438563,0.0371564,4,NC_000019.10:44879407-44879429,+,
+chr19:44879764-44879794,chr19:44879764-44879794.0,GGCTGTCGTGGGACCCAGTA,GGCTGTCGTGGGACCCAGTA,NGG,39,2:3 | 3:36,0.484192,0.20077,1,NC_000019.10:44879768-44879790,+,
+chr19:44882083-44882113,chr19:44882083-44882113.0,ATGTCCCCTGCCCATGGGAG,ATGTCCCCTGCCCATGGGAG,NGG,49,2:2 | 3:47,0.519807,0.108391,1,NC_000019.10:44882087-44882109,+,
+chr19:44882083-44882113,chr19:44882083-44882113.1,ATGTCCTCTCCCATGGGCAG,CTGCCCATGGGAGAGGACAT,NGG,49,2:3 | 3:46,0.502604,0.11867,2,NC_000019.10:44882091-44882113,-,
+chr19:44890938-44890968,chr19:44890938-44890968.0,GGGCGATGCCTCAGCGGGCG,GGGCGATGCCTCAGCGGGCG,NGG,9,2:0 | 3:9,0.364181,0.692746,1,NC_000019.10:44890945-44890967,+,
+chr19:44890938-44890968,chr19:44890938-44890968.1,GAGGCGGGGCGATGCCTCAG,GAGGCGGGGCGATGCCTCAG,NGG,20,2:1 | 3:19,0.64435,0.301062,2,NC_000019.10:44890939-44890961,+,
+chr19:44890938-44890968,chr19:44890938-44890968.2,AGGCGGGGCGATGCCTCAGC,AGGCGGGGCGATGCCTCAGC,NGG,23,2:0 | 3:23,0.509674,0.222511,3,NC_000019.10:44890940-44890962,+,
+chr19:44893392-44893422,chr19:44893392-44893422.0,TCAGTCCCCCCAACCCTGTC,GACAGGGTTGGGGGGACTGA,NGG,38,2:1 | 3:37,0.246353,0.150015,1,NC_000019.10:44893399-44893421,-,
+chr19:44893392-44893422,chr19:44893392-44893422.1,CAGTCCCCCCAACCCTGTCT,AGACAGGGTTGGGGGGACTG,NGG,39,2:1 | 3:38,0.421315,0.183028,2,NC_000019.10:44893398-44893420,-,
+chr19:44893392-44893422,chr19:44893392-44893422.2,TGGAGGCCCAGACAGGGTTG,TGGAGGCCCAGACAGGGTTG,NGG,87,2:6 | 3:81,0.423803,0.0651253,3,NC_000019.10:44893392-44893414,+,
+chr19:44899445-44899475,chr19:44899445-44899475.0,ACGTCCACCCCCTTAGTACC,ACGTCCACCCCCTTAGTACC,NGG,11,2:0 | 3:11,0.39942,0.736382,1,NC_000019.10:44899446-44899468,+,
+chr19:44899445-44899475,chr19:44899445-44899475.1,CGTCCACCCCCTTAGTACCT,CGTCCACCCCCTTAGTACCT,NGG,21,2:0 | 3:21,0.556629,0.298302,2,NC_000019.10:44899447-44899469,+,
+chr19:44899445-44899475,chr19:44899445-44899475.2,AGTCCCAGGTACTAAGGGGG,CCCCCTTAGTACCTGGGACT,NGG,1329,2:54 | 3:1275,0.615408,0.0116601,3,NC_000019.10:44899450-44899472,-,
+chr19:44901159-44901189,chr19:44901159-44901189.0,AATTAGCAAGTGGCCCCACC,GGTGGGGCCACTTGCTAATT,NGG,13,2:0 | 3:13,0.515832,0.450512,1,NC_000019.10:44901159-44901181,-,
+chr19:44901789-44901819,chr19:44901789-44901819.0,GTAGGTAGAGCAGCCAGGCG,GTAGGTAGAGCAGCCAGGCG,NGG,18,2:0 | 3:18,0.584331,0.233128,1,NC_000019.10:44901794-44901816,+,
+chr19:44901789-44901819,chr19:44901789-44901819.1,AAAAAGTAGGTAGAGCAGCC,AAAAAGTAGGTAGAGCAGCC,NGG,48,2:4 | 3:44,0.529511,0.0933511,2,NC_000019.10:44901789-44901811,+,
+chr19:44908668-44908698,chr19:44908668-44908698.0,GGAGGACGTGTGCGGCCGCC,GGAGGACGTGTGCGGCCGCC,NGG,19,2:0 | 3:19,0.415328,0.404294,1,NC_000019.10:44908674-44908696,+,"apolipoprotein E, transcript variant 1"
+chr19:44908806-44908836,chr19:44908806-44908836.0,CGATGACCTGCAGAAGCGCC,CGATGACCTGCAGAAGCGCC,NGG,8,2:0 | 3:8,0.46055,0.388152,1,NC_000019.10:44908806-44908828,+,"apolipoprotein E, transcript variant 1"
+chr19:44908806-44908836,chr19:44908806-44908836.1,ACACTGCCAGGCGCTTCTGC,GCAGAAGCGCCTGGCAGTGT,NGG,21,2:0 | 3:21,0.478205,0.211465,2,NC_000019.10:44908812-44908834,-,"apolipoprotein E, transcript variant 1"
+chr19:44912826-44912856,chr19:44912826-44912856.0,TATGCTATTCTTGTGGGGTC,TATGCTATTCTTGTGGGGTC,NGG,20,2:1 | 3:19,0.320912,0.394312,1,NC_000019.10:44912827-44912849,+,
+chr19:44912826-44912856,chr19:44912826-44912856.1,ATGCTATTCTTGTGGGGTCT,ATGCTATTCTTGTGGGGTCT,NGG,21,2:0 | 3:21,0.388747,0.209107,2,NC_000019.10:44912828-44912850,+,
+chr19:44915213-44915243,chr19:44915213-44915243.0,TAAGCTGGGTGGGGGGCTCT,TAAGCTGGGTGGGGGGCTCT,NGG,45,2:3 | 3:42,0.341943,0.103398,1,NC_000019.10:44915219-44915241,+,
+chr19:44915213-44915243,chr19:44915213-44915243.1,GTAAGCTGGGTGGGGGGCTC,GTAAGCTGGGTGGGGGGCTC,NGG,50,2:4 | 3:46,0.123898,0.0916766,2,NC_000019.10:44915218-44915240,+,
+chr19:44919288-44919318,chr19:44919288-44919318.0,TGCTGAGGACTCCCTCCATG,TGCTGAGGACTCCCTCCATG,NGG,49,2:2 | 3:47,0.617726,0.157479,1,NC_000019.10:44919290-44919312,+,"apolipoprotein C1, transcript variant 3"
+chr19:44924506-44924536,chr19:44924506-44924536.0,CCAAGGGGTCGAGTGGATGT,ACATCCACTCGACCCCTTGG,NGG,9,2:0 | 3:9,0.569147,0.44146,1,NC_000019.10:44924510-44924532,-,
+chr19:44924506-44924536,chr19:44924506-44924536.1,CCAACATCCACTCGACCCCT,CCAACATCCACTCGACCCCT,NGG,10,2:0 | 3:10,0.514857,0.69704,2,NC_000019.10:44924510-44924532,+,
+chr19:44924506-44924536,chr19:44924506-44924536.2,AGGGGTCGAGTGGATGTTGG,CCAACATCCACTCGACCCCT,NGG,24,2:0 | 3:24,0.547222,0.213829,3,NC_000019.10:44924507-44924529,-,
+chr19:44953559-44953589,chr19:44953559-44953589.0,TGAGTGACTTACCTCTCTGA,TCAGAGAGGTAAGTCACTCA,NGG,16,2:0 | 3:16,0.628362,0.343641,1,NC_000019.10:44953560-44953582,-,
+chr19:44953559-44953589,chr19:44953559-44953589.1,GTGAGTGACTTACCTCTCTG,CAGAGAGGTAAGTCACTCAC,NGG,40,2:0 | 3:40,0.619924,0.20166,2,NC_000019.10:44953561-44953583,-,
+chr19:44955190-44955220,chr19:44955190-44955220.0,GGCTGGGAGAAAGACGAGTA,GGCTGGGAGAAAGACGAGTA,NGG,36,2:5 | 3:31,0.631667,0.276153,1,NC_000019.10:44955196-44955218,+,
+chr19:44957734-44957764,chr19:44957734-44957764.0,TAAAGCAGCAGACTGTGCAG,CTGCACAGTCTGCTGCTTTA,NGG,58,2:3 | 3:55,0.599585,0.115607,1,NC_000019.10:44957741-44957763,-,
+chr19:44957734-44957764,chr19:44957734-44957764.1,AAAGCAGCAGACTGTGCAGA,TCTGCACAGTCTGCTGCTTT,NGG,69,2:4 | 3:65,0.5808,0.0835503,2,NC_000019.10:44957740-44957762,-,
+chr19:44973231-44973261,chr19:44973231-44973261.0,ACTTGGGAGGTGATGGGGTG,ACTTGGGAGGTGATGGGGTG,NGG,140,2:9 | 3:131,0.375274,0.0518958,1,NC_000019.10:44973234-44973256,+,
+chr19:44973231-44973261,chr19:44973231-44973261.1,GGGAGGTGATGGGGTGTGGA,GGGAGGTGATGGGGTGTGGA,NGG,338,2:18 | 3:320,0.348124,0.0250307,2,NC_000019.10:44973238-44973260,+,
+chr19:44975079-44975109,chr19:44975079-44975109.0,CTCTCATGCGATGTGGCCTT,AAGGCCACATCGCATGAGAG,NGG,16,2:0 | 3:16,0.408604,0.255234,1,NC_000019.10:44975079-44975101,-,
+chr19:44975079-44975109,chr19:44975079-44975109.1,TCTGAATCTCTCATGCGATG,CATCGCATGAGAGATTCAGA,NGG,19,2:0 | 3:19,0.657333,0.267407,2,NC_000019.10:44975086-44975108,-,
+chr19:44975079-44975109,chr19:44975079-44975109.2,TCTCTCATGCGATGTGGCCT,AGGCCACATCGCATGAGAGA,NGG,21,2:0 | 3:21,0.331851,0.291061,3,NC_000019.10:44975080-44975102,-,
+chr19:45001253-45001283,chr19:45001253-45001283.0,GCGCTCAGGAGGGGTTGGGC,GCCCAACCCCTCCTGAGCGC,NGG,42,2:2 | 3:40,0.447396,0.15924,1,NC_000019.10:45001260-45001282,-,
+chr19:45013440-45013469,chr19:45013440-45013469.0,CTCTTTGGTGTCTGTTAATC,CTCTTTGGTGTCTGTTAATC,NGG,94,2:4 | 3:90,0.2469,0.0897025,1,NC_000019.10:45013440-45013462,+,
+chr19:45019458-45019488,chr19:45019458-45019488.0,TAATGAGATTGTAGCTACAG,CTGTAGCTACAATCTCATTA,NGG,40,2:0 | 3:40,0.633877,0.145985,1,NC_000019.10:45019462-45019484,-,
+chr19:45029417-45029447,chr19:45029417-45029447.0,AAAAAGACAGCTGGTCACCG,AAAAAGACAGCTGGTCACCG,NGG,129,2:12 | 3:117,0.701495,0.162461,1,NC_000019.10:45029423-45029445,+,
+chr19:45045861-45045891,chr19:45045861-45045891.0,CTCTGCACCATCCCTCCACC,GGTGGAGGGATGGTGCAGAG,NGG,62,2:4 | 3:58,0.423437,0.135138,1,NC_000019.10:45045866-45045888,-,
+chr19:45045861-45045891,chr19:45045861-45045891.1,CAGGTGGAGGGATGGTGCAG,CAGGTGGAGGGATGGTGCAG,NGG,115,2:4 | 3:111,0.615373,0.0469067,2,NC_000019.10:45045867-45045889,+,
+chr19:45102034-45102064,chr19:45102034-45102064.0,AGCGTGTCCTTGGCCTGCTT,AGCGTGTCCTTGGCCTGCTT,NGG,15,2:3 | 3:12,0.39335,0.237408,1,NC_000019.10:45102036-45102058,+,
+chr19:45102034-45102064,chr19:45102034-45102064.1,CAAGCAGGCCAAGGACACGC,GCGTGTCCTTGGCCTGCTTG,NGG,30,2:1 | 3:29,0.602648,0.198836,2,NC_000019.10:45102034-45102056,-,
+chr19:45102034-45102064,chr19:45102034-45102064.2,CAGCGTGTCCTTGGCCTGCT,CAGCGTGTCCTTGGCCTGCT,NGG,32,2:1 | 3:31,0.269876,0.111736,3,NC_000019.10:45102035-45102057,+,
+chr19:45125830-45125860,chr19:45125830-45125860.0,GGAAGAGAAGTGGGCCATTC,GGAAGAGAAGTGGGCCATTC,NGG,34,2:1 | 3:33,0.29986,0.234551,1,NC_000019.10:45125830-45125852,+,
+chr19:45131580-45131610,chr19:45131580-45131610.0,ATTGTGCATGGAAAGTACTT,ATTGTGCATGGAAAGTACTT,NGG,48,2:1 | 3:47,0.544778,0.139185,1,NC_000019.10:45131583-45131605,+,
+chr19:45135558-45135588,chr19:45135558-45135588.0,GCTCCAGAGCTCCTGAGCCA,GCTCCAGAGCTCCTGAGCCA,NGG,74,2:0 | 3:74,0.470995,0.146014,1,NC_000019.10:45135563-45135585,+,
+chr19:45135558-45135588,chr19:45135558-45135588.1,AGCCCCTGGCTCAGGAGCTC,GAGCTCCTGAGCCAGGGGCT,NGG,84,2:5 | 3:79,0.32921,0.0962829,2,NC_000019.10:45135566-45135588,-,
+chr19:45135558-45135588,chr19:45135558-45135588.2,CTCCAGAGCTCCTGAGCCAG,CTCCAGAGCTCCTGAGCCAG,NGG,151,2:11 | 3:140,0.506965,0.0562859,3,NC_000019.10:45135564-45135586,+,
+chr19:45144946-45144976,chr19:45144946-45144976.0,CAGCGTGCTGCGCCTCGGGC,CAGCGTGCTGCGCCTCGGGC,NGG,8,2:0 | 3:8,0.333768,0.545082,1,NC_000019.10:45144949-45144971,+,"protein phosphatase 1 regulatory subunit 37, transcript variant X2"
+chr19:45144946-45144976,chr19:45144946-45144976.1,GCCCGAGGCGCAGCACGCTG,CAGCGTGCTGCGCCTCGGGC,NGG,15,2:0 | 3:15,0.535146,0.42583,2,NC_000019.10:45144946-45144968,-,"protein phosphatase 1 regulatory subunit 37, transcript variant X2"
+chr19:45146564-45146594,chr19:45146564-45146594.0,CCGACCGGAAAAAGGGAACT,AGTTCCCTTTTTCCGGTCGG,NGG,4,2:0 | 3:4,0.447777,0.483391,1,NC_000019.10:45146566-45146588,-,"protein phosphatase 1 regulatory subunit 37, transcript variant X2"
+chr19:45146564-45146594,chr19:45146564-45146594.1,CGACCGGAAAAAGGGAACTT,AAGTTCCCTTTTTCCGGTCG,NGG,5,2:0 | 3:5,0.515998,0.466166,2,NC_000019.10:45146565-45146587,-,"protein phosphatase 1 regulatory subunit 37, transcript variant X2"
+chr19:45146564-45146594,chr19:45146564-45146594.2,CCAAGTTCCCTTTTTCCGGT,CCAAGTTCCCTTTTTCCGGT,NGG,13,2:0 | 3:13,0.496109,0.386389,3,NC_000019.10:45146566-45146588,+,"protein phosphatase 1 regulatory subunit 37, transcript variant X2"
+chr19:45146564-45146594,chr19:45146564-45146594.3,GACCGGAAAAAGGGAACTTG,CAAGTTCCCTTTTTCCGGTC,NGG,16,2:2 | 3:14,0.667039,0.374103,4,NC_000019.10:45146564-45146586,-,
+chr19:45148805-45148835,chr19:45148805-45148835.0,CTGGGCCTTTCTTACTGTTG,CTGGGCCTTTCTTACTGTTG,NGG,26,2:3 | 3:23,0.45174,0.236606,1,NC_000019.10:45148810-45148832,+,
+chr19:45148805-45148835,chr19:45148805-45148835.1,AACTGGGCCTTTCTTACTGT,AACTGGGCCTTTCTTACTGT,NGG,34,2:0 | 3:34,0.352378,0.287489,2,NC_000019.10:45148808-45148830,+,
+chr19:45148805-45148835,chr19:45148805-45148835.2,ACTGGGCCTTTCTTACTGTT,ACTGGGCCTTTCTTACTGTT,NGG,34,2:0 | 3:34,0.345143,0.16501,3,NC_000019.10:45148809-45148831,+,
+chr19:45148805-45148835,chr19:45148805-45148835.3,TGGGCCTTTCTTACTGTTGG,TGGGCCTTTCTTACTGTTGG,NGG,35,2:0 | 3:35,0.526504,0.163349,4,NC_000019.10:45148811-45148833,+,
+chr19:45169204-45169234,chr19:45169204-45169234.0,GGTAAGTGCTGGGGCGGATC,GATCCGCCCCAGCACTTACC,NGG,13,2:0 | 3:13,0.344582,0.3915,1,NC_000019.10:45169212-45169234,-,
+chr19:45169204-45169234,chr19:45169204-45169234.1,GCTGGGGCGGATCTGGACCC,GGGTCCAGATCCGCCCCAGC,NGG,30,2:1 | 3:29,0.462823,0.195595,2,NC_000019.10:45169205-45169227,-,
+chr19:45187775-45187805,chr19:45187775-45187805.0,TGGGGCATCAGTGGGGGTCC,GGACCCCCACTGATGCCCCA,NGG,60,2:1 | 3:59,0.292531,0.107822,1,NC_000019.10:45187778-45187800,-,
+chr19:45193746-45193776,chr19:45193746-45193776.0,TTCAGTGACTACACAGCAAA,TTTGCTGTGTAGTCACTGAA,NGG,45,2:0 | 3:45,0.445257,0.19347,1,NC_000019.10:45193746-45193768,-,
+chr19:45233944-45233974,chr19:45233944-45233974.0,GGTGCCGGAGCTCTTATTCT,GGTGCCGGAGCTCTTATTCT,NGG,6,2:0 | 3:6,0.408255,0.594542,1,NC_000019.10:45233945-45233967,+,
+chr19:45233944-45233974,chr19:45233944-45233974.1,CAGTCCTAGAATAAGAGCTC,GAGCTCTTATTCTAGGACTG,NGG,18,2:0 | 3:18,0.549853,0.334418,2,NC_000019.10:45233949-45233971,-,
+chr19:45238820-45238850,chr19:45238820-45238850.0,TTCCGGCTGGGCTGGGCCCC,GGGGCCCAGCCCAGCCGGAA,NGG,53,2:0 | 3:53,0.287527,0.110951,1,NC_000019.10:45238825-45238847,-,exocyst complex component 3 like 2
+chr19:45238820-45238850,chr19:45238820-45238850.1,CGGGGCCCAGCCCAGCCGGA,CGGGGCCCAGCCCAGCCGGA,NGG,57,2:2 | 3:55,0.381568,0.11286,2,NC_000019.10:45238827-45238849,+,exocyst complex component 3 like 2
+chr19:45238820-45238850,chr19:45238820-45238850.2,GGGGCCCAGCCCAGCCGGAA,GGGGCCCAGCCCAGCCGGAA,NGG,69,2:22 | 3:47,0.32949,0.125382,3,NC_000019.10:45238828-45238850,+,exocyst complex component 3 like 2
+chr19:45238820-45238850,chr19:45238820-45238850.3,CTTCCGGCTGGGCTGGGCCC,GGGCCCAGCCCAGCCGGAAG,NGG,93,2:5 | 3:88,0.275578,0.086576,4,NC_000019.10:45238826-45238848,-,exocyst complex component 3 like 2
+chr19:45266475-45266505,chr19:45266475-45266505.0,GCGGATGGGGGGGAGGGGAC,GCGGATGGGGGGGAGGGGAC,NGG,226,2:2 | 3:224,0.354944,0.0274051,1,NC_000019.10:45266481-45266503,+,
+chr19:45266475-45266505,chr19:45266475-45266505.1,GGGGGAGCGGATGGGGGGGA,GGGGGAGCGGATGGGGGGGA,NGG,432,2:21 | 3:411,0.39697,0.0100107,2,NC_000019.10:45266475-45266497,+,
+chr19:45332930-45332960,chr19:45332930-45332960.0,TCTCTTTCTCGGTCCCGGCA,TGCCGGGACCGAGAAAGAGA,NGG,6,2:0 | 3:6,0.543829,0.627545,1,NC_000019.10:45332938-45332960,-,
+chr19:45341234-45341264,chr19:45341234-45341264.0,GTGTCAGGCTGTGGGTATGA,GTGTCAGGCTGTGGGTATGA,NGG,45,2:6 | 3:39,0.580588,0.145283,1,NC_000019.10:45341238-45341260,+,
+chr19:45341234-45341264,chr19:45341234-45341264.1,TGTGTCAGGCTGTGGGTATG,TGTGTCAGGCTGTGGGTATG,NGG,81,2:5 | 3:76,0.511821,0.121045,2,NC_000019.10:45341237-45341259,+,
+chr19:45451772-45451802,chr19:45451772-45451802.0,GTGGTTTGCACTTGTGTATC,GTGGTTTGCACTTGTGTATC,NGG,42,2:0 | 3:42,0.173599,0.255589,1,NC_000019.10:45451775-45451797,+,
+chr19:45451772-45451802,chr19:45451772-45451802.1,TGGTTTGCACTTGTGTATCT,TGGTTTGCACTTGTGTATCT,NGG,50,2:4 | 3:46,0.458738,0.255429,2,NC_000019.10:45451776-45451798,+,
+chr19:51224690-51224720,chr19:51224690-51224720.0,ACTAAACACCCCATGGATCT,ACTAAACACCCCATGGATCT,NGG,33,2:0 | 3:33,0.423653,0.289099,1,NC_000019.10:51224695-51224717,+,"CD33 molecule, transcript variant X2"
+chr2:127054664-127054694,chr2:127054664-127054694.0,CAGAACCACCCGGGGCACTT,CAGAACCACCCGGGGCACTT,NGG,18,2:0 | 3:18,0.545087,0.402611,1,NC_000002.12:127054669-127054691,+,
+chr2:127054664-127054694,chr2:127054664-127054694.1,TCAGAACCACCCGGGGCACT,TCAGAACCACCCGGGGCACT,NGG,23,2:3 | 3:20,0.367228,0.187601,2,NC_000002.12:127054668-127054690,+,
+chr2:127068941-127068971,chr2:127068941-127068971.0,CCTTCAAACTGCCAAAAAGA,TCTTTTTGGCAGTTTGAAGG,NGG,47,2:6 | 3:41,0.514893,0.145272,1,NC_000002.12:127068944-127068966,-,"bridging integrator 1, transcript variant 15"
+chr2:127068941-127068971,chr2:127068941-127068971.1,CTTCTTTTTGGCAGTTTGAA,CTTCTTTTTGGCAGTTTGAA,NGG,82,2:6 | 3:76,0.418752,0.0827677,2,NC_000002.12:127068945-127068967,+,"bridging integrator 1, transcript variant 15"
+chr2:127085015-127085045,chr2:127085015-127085045.0,CGGGGGATGGAGGGAGAACA,TGTTCTCCCTCCATCCCCCG,NGG,124,2:7 | 3:117,0.50273,0.0595081,1,NC_000002.12:127085016-127085038,-,
+chr2:127104174-127104204,chr2:127104174-127104204.0,TTGGGCCTGACGCAGGCTGA,TCAGCCTGCGTCAGGCCCAA,NGG,14,2:0 | 3:14,0.500127,0.470201,1,NC_000002.12:127104177-127104199,-,
+chr2:127104174-127104204,chr2:127104174-127104204.1,GGCCTGACGCAGGCTGATGG,CCATCAGCCTGCGTCAGGCC,NGG,38,2:2 | 3:36,0.556309,0.211083,2,NC_000002.12:127104174-127104196,-,
+chr2:134707030-134707060,chr2:134707030-134707060.0,TCGTTCCCAAGCACACCCAC,TCGTTCCCAAGCACACCCAC,NGG,8,2:0 | 3:8,0.545964,0.581435,1,NC_000002.12:134707038-134707060,+,
+chr2:168235416-168235446,chr2:168235416-168235446.0,TTAGGGCAGAATCACGAGCC,TTAGGGCAGAATCACGAGCC,NGG,8,2:0 | 3:8,0.494537,0.523128,1,NC_000002.12:168235419-168235441,+,
+chr2:168235416-168235446,chr2:168235416-168235446.1,TAGGGCAGAATCACGAGCCT,TAGGGCAGAATCACGAGCCT,NGG,9,2:0 | 3:9,0.556263,0.335089,2,NC_000002.12:168235420-168235442,+,
+chr20:56411202-56411232,chr20:56411202-56411232.0,TTGAGCCTGGCTTGGAAGAA,TTGAGCCTGGCTTGGAAGAA,NGG,78,2:6 | 3:72,0.406867,0.0979908,1,NC_000020.11:56411209-56411231,+,
+chr20:56411202-56411232,chr20:56411202-56411232.1,TGAGCCTGGCTTGGAAGAAT,TGAGCCTGGCTTGGAAGAAT,NGG,80,2:1 | 3:79,0.438048,0.145274,2,NC_000020.11:56411210-56411232,+,
+chr21:44333218-44333248,chr21:44333218-44333248.0,GCACCGGCTCACAGGCTCCA,GCACCGGCTCACAGGCTCCA,NGG,34,2:4 | 3:30,0.570586,0.174553,1,NC_000021.9:44333223-44333245,+,"cilia and flagella associated protein 410, transcript variant X1"
+chr21:44333218-44333248,chr21:44333218-44333248.1,GGCACCGGCTCACAGGCTCC,GGCACCGGCTCACAGGCTCC,NGG,36,2:4 | 3:32,0.40113,0.143454,2,NC_000021.9:44333222-44333244,+,"cilia and flagella associated protein 410, transcript variant X1"
+chr21:44333218-44333248,chr21:44333218-44333248.2,CCGGCTCACAGGCTCCAGGG,CCGGCTCACAGGCTCCAGGG,NGG,58,2:4 | 3:54,0.688577,0.154843,3,NC_000021.9:44333226-44333248,+,"cilia and flagella associated protein 410, transcript variant X1"
+chr21:44333218-44333248,chr21:44333218-44333248.3,CCACCCTGGAGCCTGTGAGC,GCTCACAGGCTCCAGGGTGG,NGG,99,2:5 | 3:94,0.499058,0.0816407,4,NC_000021.9:44333226-44333248,-,"cilia and flagella associated protein 410, transcript variant X1"
+chr3:58232609-58232639,chr3:58232609-58232639.0,ATACTGAGGCCCTCATCACA,TGTGATGAGGGCCTCAGTAT,NGG,16,2:0 | 3:16,0.633511,0.393238,1,NC_000003.12:58232613-58232635,-,
+chr3:182990283-182990313,chr3:182990283-182990313.0,CCAACTACGGTGAAGTTACA,TGTAACTTCACCGTAGTTGG,NGG,8,2:0 | 3:8,0.449991,0.445935,1,NC_000003.12:182990284-182990306,-,
+chr4:881867-881897,chr4:881867-881897.0,GAGCTGTCCCCTGTCCCCGG,GAGCTGTCCCCTGTCCCCGG,NGG,27,2:2 | 3:25,0.624795,0.156403,1,NC_000004.12:881872-881894,+,
+chr4:881867-881897,chr4:881867-881897.1,AGCTGTCCCCTGTCCCCGGA,AGCTGTCCCCTGTCCCCGGA,NGG,29,2:0 | 3:29,0.573428,0.163055,2,NC_000004.12:881873-881895,+,
+chr4:881867-881897,chr4:881867-881897.2,ACAGAGCTGTCCCCTGTCCC,ACAGAGCTGTCCCCTGTCCC,NGG,85,2:3 | 3:82,0.507979,0.0783536,3,NC_000004.12:881869-881891,+,
+chr4:945283-945313,chr4:945283-945313.0,GACAGAGACGGCGGGGGCCT,AGGCCCCCGCCGTCTCTGTC,NGG,30,2:0 | 3:30,0.298226,0.184312,1,NC_000004.12:945287-945309,-,
+chr4:945283-945313,chr4:945283-945313.1,ACAGAGACGGCGGGGGCCTG,CAGGCCCCCGCCGTCTCTGT,NGG,36,2:1 | 3:35,0.310371,0.100642,2,NC_000004.12:945286-945308,-,
+chr4:945283-945313,chr4:945283-945313.2,AGACAGAGACGGCGGGGGCC,GGCCCCCGCCGTCTCTGTCT,NGG,40,2:3 | 3:37,0.287769,0.159264,3,NC_000004.12:945288-945310,-,
+chr4:945309-945339,chr4:945309-945339.0,GCAACAAACGGCGGGGAGTG,CACTCCCCGCCGTTTGTTGC,NGG,9,2:0 | 3:9,0.544418,0.400953,1,NC_000004.12:945311-945333,-,
+chr4:957236-957266,chr4:957236-957266.0,CATCGGGAAGTGAAGGACAG,CTGTCCTTCACTTCCCGATG,NGG,34,2:1 | 3:33,0.700879,0.153288,1,NC_000004.12:957238-957260,-,
+chr4:958143-958173,chr4:958143-958173.0,CCGTGGTCCACATGGCCAGC,GCTGGCCATGTGGACCACGG,NGG,20,2:0 | 3:20,0.488199,0.250671,1,NC_000004.12:958148-958170,-,"transmembrane protein 175, transcript variant X3;transmembrane protein 175, transcript variant X3"
+chr4:958143-958173,chr4:958143-958173.1,CCAGCTGGCCATGTGGACCA,CCAGCTGGCCATGTGGACCA,NGG,56,2:2 | 3:54,0.601148,0.180607,2,NC_000004.12:958148-958170,+,"transmembrane protein 175, transcript variant X3;transmembrane protein 175, transcript variant X3"
+chr4:982794-982824,chr4:982794-982824.0,CCCCAGGGTTTATTTCAGTG,CACTGAAATAAACCCTGGGG,NGG,23,2:0 | 3:23,0.612583,0.294009,1,NC_000004.12:982799-982821,-,
+chr4:982794-982824,chr4:982794-982824.1,ACCTCACTGAAATAAACCCT,ACCTCACTGAAATAAACCCT,NGG,28,2:2 | 3:26,0.492692,0.2652,2,NC_000004.12:982798-982820,+,
+chr4:982794-982824,chr4:982794-982824.2,CACCTCACTGAAATAAACCC,CACCTCACTGAAATAAACCC,NGG,30,2:1 | 3:29,0.52486,0.187367,3,NC_000004.12:982797-982819,+,
+chr4:982794-982824,chr4:982794-982824.3,GGGTTTATTTCAGTGAGGTG,CACCTCACTGAAATAAACCC,NGG,42,2:2 | 3:40,0.498538,0.198717,4,NC_000004.12:982794-982816,-,
+chr4:982794-982824,chr4:982794-982824.4,CCTCACTGAAATAAACCCTG,CCTCACTGAAATAAACCCTG,NGG,51,2:0 | 3:51,0.773843,0.140854,5,NC_000004.12:982799-982821,+,
+chr4:11021159-11021189,chr4:11021159-11021189.0,GGTCTGTGTGTATGCAGAAC,GGTCTGTGTGTATGCAGAAC,NGG,46,2:1 | 3:45,0.47714,0.0925846,1,NC_000004.12:11021165-11021187,+,
+chr4:15722022-15722052,chr4:15722022-15722052.0,GAAGTTCCAAGCCACCAGGA,TCCTGGTGGCTTGGAACTTC,NGG,22,2:2 | 3:20,0.656923,0.198947,1,NC_000004.12:15722027-15722049,-,
+chr4:15722022-15722052,chr4:15722022-15722052.1,AAGTTCCAAGCCACCAGGAG,CTCCTGGTGGCTTGGAACTT,NGG,27,2:0 | 3:27,0.599495,0.343418,2,NC_000004.12:15722026-15722048,-,
+chr4:15722022-15722052,chr4:15722022-15722052.2,TGAAGTTCCAAGCCACCAGG,CCTGGTGGCTTGGAACTTCA,NGG,43,2:2 | 3:41,0.674281,0.226414,3,NC_000004.12:15722028-15722050,-,
+chr4:15722022-15722052,chr4:15722022-15722052.3,TCCAAGCCACCAGGAGGGGA,TCCCCTCCTGGTGGCTTGGA,NGG,57,2:3 | 3:54,0.50192,0.0925385,4,NC_000004.12:15722022-15722044,-,
+chr4:89631753-89631783,chr4:89631753-89631783.0,CTCCATTCAACTATTACTCA,TGAGTAATAGTTGAATGGAG,NGG,21,2:0 | 3:21,0.502226,0.28123,1,NC_000004.12:89631761-89631783,-,
+chr4:89631753-89631783,chr4:89631753-89631783.1,AACCTTGAGTAATAGTTGAA,AACCTTGAGTAATAGTTGAA,NGG,27,2:0 | 3:27,0.478791,0.195097,2,NC_000004.12:89631759-89631781,+,
+chr4:89775990-89776020,chr4:89775990-89776020.0,AATATCTGTTATTGGTACTG,CAGTACCAATAACAGATATT,NGG,30,2:6 | 3:24,0.693501,0.239941,1,NC_000004.12:89775994-89776016,-,
+chr4:89781614-89781644,chr4:89781614-89781644.0,AGTAAATGTGAGCTGCAATC,GATTGCAGCTCACATTTACT,NGG,21,2:0 | 3:21,0.45527,0.357212,1,NC_000004.12:89781616-89781638,-,
+chr6:40897485-40897515,chr6:40897485-40897515.0,CATACGTCTAGAGCCACCCC,CATACGTCTAGAGCCACCCC,NGG,3,2:0 | 3:3,0.673258,0.452072,1,NC_000006.12:40897493-40897515,+,
+chr6:41161453-41161483,chr6:41161453-41161483.0,GTGCTGACCACACGCTGGCA,GTGCTGACCACACGCTGGCA,NGG,11,2:0 | 3:11,0.451294,0.472599,1,NC_000006.12:41161457-41161479,+,"triggering receptor expressed on myeloid cells 2, transcript variant 2"
+chr6:41161453-41161483,chr6:41161453-41161483.1,TGCTGACCACACGCTGGCAT,TGCTGACCACACGCTGGCAT,NGG,16,2:0 | 3:16,0.434833,0.357426,2,NC_000006.12:41161458-41161480,+,"triggering receptor expressed on myeloid cells 2, transcript variant 2"
+chr6:3727653-3727683,chr6:3727653-3727683.0,TTCTGAAAACCAAAGCAACA,TTCTGAAAACCAAAGCAACA,NGG,158,2:9 | 3:149,0.635553,0.059664,1,NC_000006.12:3727661-3727683,+,
+chr6:3738237-3738267,chr6:3738237-3738267.0,CTCATTACAGATGACGACCC,GGGTCGTCATCTGTAATGAG,NGG,15,2:0 | 3:15,0.573255,0.660497,1,NC_000006.12:3738237-3738259,-,
+chr6:3738237-3738267,chr6:3738237-3738267.1,CGTCATCTGTAATGAGATGT,CGTCATCTGTAATGAGATGT,NGG,17,2:0 | 3:17,0.530641,0.411154,2,NC_000006.12:3738244-3738266,+,
+chr6:3738237-3738267,chr6:3738237-3738267.2,GTCATCTGTAATGAGATGTC,GTCATCTGTAATGAGATGTC,NGG,27,2:3 | 3:24,0.543407,0.188877,3,NC_000006.12:3738245-3738267,+,
+chr6:3793253-3793283,chr6:3793253-3793283.0,AATCATGTCTTCACCCCATG,AATCATGTCTTCACCCCATG,NGG,20,2:0 | 3:20,0.672006,0.27761,1,NC_000006.12:3793256-3793278,+,
+chr6:3793253-3793283,chr6:3793253-3793283.1,CATGTCTTCACCCCATGGGG,CATGTCTTCACCCCATGGGG,NGG,25,2:1 | 3:24,0.579133,0.157068,2,NC_000006.12:3793259-3793281,+,
+chr6:3793253-3793283,chr6:3793253-3793283.2,CAATCATGTCTTCACCCCAT,CAATCATGTCTTCACCCCAT,NGG,29,2:0 | 3:29,0.555337,0.241421,3,NC_000006.12:3793255-3793277,+,
+chr6:3793253-3793283,chr6:3793253-3793283.3,ACAATCATGTCTTCACCCCA,ACAATCATGTCTTCACCCCA,NGG,37,2:1 | 3:36,0.569272,0.250682,4,NC_000006.12:3793254-3793276,+,
+chr6:3855742-3855772,chr6:3855742-3855772.0,AATATTCATTAAAATAAACC,AATATTCATTAAAATAAACC,NGG,244,2:9 | 3:235,0.630615,0.0395385,1,NC_000006.12:3855749-3855771,+,
+chr6:4026652-4026682,chr6:4026652-4026682.0,TGCTATAGATTAGATAATCT,TGCTATAGATTAGATAATCT,NGG,24,2:1 | 3:23,0.519096,0.298367,1,NC_000006.12:4026653-4026675,+,
+chr6:4032340-4032370,chr6:4032340-4032370.0,TCTACTTTCATTTATAATTG,CAATTATAAATGAAAGTAGA,NGG,120,2:14 | 3:106,0.525161,0.0523615,1,NC_000006.12:4032347-4032369,-,"pre-mRNA processing factor 4B, transcript variant 4"
+chr6:4034578-4034608,chr6:4034578-4034608.0,CAAAATACTATATGGTATCC,GGATACCATATAGTATTTTG,NGG,63,2:2 | 3:61,0.464984,0.0624729,1,NC_000006.12:4034583-4034605,-,
+chr6:4095266-4095296,chr6:4095266-4095296.0,ATTGTGTTTCAAGGTGTTAC,ATTGTGTTTCAAGGTGTTAC,NGG,37,2:0 | 3:37,0.293351,0.209671,1,NC_000006.12:4095269-4095291,+,
+chr6:4095266-4095296,chr6:4095266-4095296.1,TGTAACACCTTGAAACACAA,TTGTGTTTCAAGGTGTTACA,NGG,56,2:3 | 3:53,0.680984,0.159323,2,NC_000006.12:4095267-4095289,-,
+chr6:3613389-3613419,chr6:3613389-3613419.0,CCTTCTTACAACGAAGTAAT,ATTACTTCGTTGTAAGAAGG,NGG,10,2:0 | 3:10,0.202015,0.716406,1,NC_000006.12:3613391-3613413,-,
+chr6:3613389-3613419,chr6:3613389-3613419.1,CCAATTACTTCGTTGTAAGA,CCAATTACTTCGTTGTAAGA,NGG,11,2:0 | 3:11,0.462539,0.496243,2,NC_000006.12:3613391-3613413,+,
+chr6:3854553-3854583,chr6:3854553-3854583.0,AACCTGTCTGCCAGCAGTGC,GCACTGCTGGCAGACAGGTT,NGG,30,2:0 | 3:30,0.362752,0.137451,1,NC_000006.12:3854561-3854583,-,
+chr6:3854553-3854583,chr6:3854553-3854583.1,ACCTGTCTGCCAGCAGTGCT,AGCACTGCTGGCAGACAGGT,NGG,45,2:4 | 3:41,0.445756,0.129438,2,NC_000006.12:3854560-3854582,-,
+chr6:3854553-3854583,chr6:3854553-3854583.2,TCCCAGCACTGCTGGCAGAC,TCCCAGCACTGCTGGCAGAC,NGG,102,2:6 | 3:96,0.490728,0.12539,3,NC_000006.12:3854559-3854581,+,
+chr6:3854553-3854583,chr6:3854553-3854583.3,TCTGCCAGCAGTGCTGGGAG,CTCCCAGCACTGCTGGCAGA,NGG,118,2:3 | 3:115,0.471813,0.0552407,4,NC_000006.12:3854555-3854577,-,
+chr6:3919152-3919182,chr6:3919152-3919182.0,CTCACCTCCCAAGTATTAAC,GTTAATACTTGGGAGGTGAG,NGG,66,2:5 | 3:61,0.401654,0.101145,1,NC_000006.12:3919156-3919178,-,
+chr6:3919152-3919182,chr6:3919152-3919182.1,GTGGCCTGTTAATACTTGGG,GTGGCCTGTTAATACTTGGG,NGG,156,2:17 | 3:139,0.664541,0.0165412,2,NC_000006.12:3919152-3919174,+,
+chr6:3958449-3958479,chr6:3958449-3958479.0,CTAACTAGCTGTCTCCGTGT,ACACGGAGACAGCTAGTTAG,NGG,1,2:0 | 3:1,0.670168,0.919962,1,NC_000006.12:3958456-3958478,-,
+chr6:3958449-3958479,chr6:3958449-3958479.1,CTAGCTGTCTCCGTGTCGGC,GCCGACACGGAGACAGCTAG,NGG,3,2:0 | 3:3,0.504791,0.523968,2,NC_000006.12:3958452-3958474,-,
+chr6:3700415-3700445,chr6:3700415-3700445.0,GAGGAGGCAACCCACGCGAA,TTCGCGTGGGTTGCCTCCTC,NGG,7,2:0 | 3:7,0.606061,0.325122,1,NC_000006.12:3700420-3700442,-,
+chr6:3700415-3700445,chr6:3700415-3700445.1,AGAGGAGGCAACCCACGCGA,TCGCGTGGGTTGCCTCCTCT,NGG,10,2:0 | 3:10,0.579126,0.366529,2,NC_000006.12:3700421-3700443,-,
+chr6:3765263-3765293,chr6:3765263-3765293.0,GATTATTTGTTTCAGACAGA,TCTGTCTGAAACAAATAATC,NGG,64,2:3 | 3:61,0.53784,0.132731,1,NC_000006.12:3765266-3765288,-,
+chr6:3765263-3765293,chr6:3765263-3765293.1,ATTATTTGTTTCAGACAGAA,TTCTGTCTGAAACAAATAAT,NGG,149,2:6 | 3:143,0.549623,0.0406069,2,NC_000006.12:3765265-3765287,-,
+chr6:4021043-4021073,chr6:4021043-4021073.0,GGCTGTGGAGATTAGAAGTT,AACTTCTAATCTCCACAGCC,NGG,37,2:0 | 3:37,0.344317,0.194342,1,NC_000006.12:4021043-4021065,-,
+chr6:4028951-4028981,chr6:4028951-4028981.0,ATAATATATGGTTCTAGGAG,CTCCTAGAACCATATATTAT,NGG,31,2:1 | 3:30,0.59734,0.181515,1,NC_000006.12:4028956-4028978,-,
+chr6:4028951-4028981,chr6:4028951-4028981.1,TAATATATGGTTCTAGGAGT,ACTCCTAGAACCATATATTA,NGG,43,2:4 | 3:39,0.550991,0.167272,2,NC_000006.12:4028955-4028977,-,
+chr6:4101472-4101502,chr6:4101472-4101502.0,GTTGCAGGGGGCTTCGGTAC,GTTGCAGGGGGCTTCGGTAC,NGG,2,2:0 | 3:2,0.453494,0.891363,1,NC_000006.12:4101472-4101494,+,
+chr6:4101472-4101502,chr6:4101472-4101502.1,AGGGGGCTTCGGTACAGGAC,AGGGGGCTTCGGTACAGGAC,NGG,15,2:0 | 3:15,0.504232,0.357584,2,NC_000006.12:4101477-4101499,+,
+chr6:4101472-4101502,chr6:4101472-4101502.2,GGGCTTCGGTACAGGACAGG,GGGCTTCGGTACAGGACAGG,NGG,20,2:0 | 3:20,0.408894,0.321595,3,NC_000006.12:4101480-4101502,+,
+chr6:4135765-4135795,chr6:4135765-4135795.0,AGGAGCCTGGGGCATGGGCG,AGGAGCCTGGGGCATGGGCG,NGG,145,2:6 | 3:139,0.334815,0.0700108,1,NC_000006.12:4135771-4135793,+,
+chr6:4135765-4135795,chr6:4135765-4135795.1,CCATGCCCCAGGCTCCTGCC,GGCAGGAGCCTGGGGCATGG,NGG,161,2:4 | 3:157,0.340176,0.0522178,2,NC_000006.12:4135765-4135787,-,
+chr6:4135765-4135795,chr6:4135765-4135795.2,GCAGGAGCCTGGGGCATGGG,GCAGGAGCCTGGGGCATGGG,NGG,254,2:27 | 3:227,0.299538,0.0349287,3,NC_000006.12:4135769-4135791,+,
+chr6:4135765-4135795,chr6:4135765-4135795.3,CCAGGCAGGAGCCTGGGGCA,CCAGGCAGGAGCCTGGGGCA,NGG,531,2:47 | 3:484,0.406683,0.0176135,4,NC_000006.12:4135765-4135787,+,
+chr6:3737172-3737202,chr6:3737172-3737202.0,ACTTCCGATCTAGAATACTG,ACTTCCGATCTAGAATACTG,NGG,8,2:0 | 3:8,0.764152,0.432197,1,NC_000006.12:3737180-3737202,+,"PX domain containing 1, transcript variant X1"
+chr6:3737172-3737202,chr6:3737172-3737202.1,CAACTTCCGATCTAGAATAC,CAACTTCCGATCTAGAATAC,NGG,9,2:0 | 3:9,0.339525,0.58255,2,NC_000006.12:3737178-3737200,+,"PX domain containing 1, transcript variant X1"
+chr6:3737172-3737202,chr6:3737172-3737202.2,AACTTCCGATCTAGAATACT,AACTTCCGATCTAGAATACT,NGG,16,2:0 | 3:16,0.495177,0.29254,3,NC_000006.12:3737179-3737201,+,"PX domain containing 1, transcript variant X1"
+chr6:3747764-3747794,chr6:3747764-3747794.0,CTTGTTTATCTTGTTACTAT,CTTGTTTATCTTGTTACTAT,NGG,87,2:4 | 3:83,0.282363,0.107575,1,NC_000006.12:3747764-3747786,+,
+chr6:3973799-3973829,chr6:3973799-3973829.0,AAGCTGGAGTGGGGGTGTCC,GGACACCCCCACTCCAGCTT,NGG,66,2:3 | 3:63,0.456746,0.0954413,1,NC_000006.12:3973805-3973827,-,
+chr6:3595324-3595354,chr6:3595324-3595354.0,TTCTATCCTGGCTTGTGGCC,GGCCACAAGCCAGGATAGAA,NGG,28,2:0 | 3:28,0.372668,0.189309,1,NC_000006.12:3595332-3595354,-,
+chr6:3595324-3595354,chr6:3595324-3595354.1,GCACAGCCCGGCCACAAGCC,GCACAGCCCGGCCACAAGCC,NGG,34,2:0 | 3:34,0.523739,0.297345,2,NC_000006.12:3595326-3595348,+,
+chr6:3908594-3908624,chr6:3908594-3908624.0,AGAAGCGCACACATCCTGAG,CTCAGGATGTGTGCGCTTCT,NGG,17,2:1 | 3:16,0.735973,0.23595,1,NC_000006.12:3908595-3908617,-,uncharacterized LOC107986558
+chr6:3908594-3908624,chr6:3908594-3908624.1,GAGAAGCGCACACATCCTGA,TCAGGATGTGTGCGCTTCTC,NGG,25,2:2 | 3:23,0.607969,0.17976,2,NC_000006.12:3908596-3908618,-,uncharacterized LOC107986558
+chr6:3908594-3908624,chr6:3908594-3908624.2,AGAGAAGCGCACACATCCTG,CAGGATGTGTGCGCTTCTCT,NGG,31,2:7 | 3:24,0.614604,0.186523,3,NC_000006.12:3908597-3908619,-,uncharacterized LOC107986558
+chr6:3910714-3910744,chr6:3910714-3910744.0,GAAATCAGCTTGTTCACAGT,ACTGTGAACAAGCTGATTTC,NGG,38,2:6 | 3:32,0.542308,0.141988,1,NC_000006.12:3910716-3910738,-,
+chr6:3910714-3910744,chr6:3910714-3910744.1,AAATCAGCTTGTTCACAGTG,CACTGTGAACAAGCTGATTT,NGG,52,2:2 | 3:50,0.742599,0.121395,2,NC_000006.12:3910715-3910737,-,
+chr6:3910714-3910744,chr6:3910714-3910744.2,AGAAATCAGCTTGTTCACAG,CTGTGAACAAGCTGATTTCT,NGG,59,2:5 | 3:54,0.591491,0.139546,3,NC_000006.12:3910717-3910739,-,
+chr6:3711344-3711374,chr6:3711344-3711374.0,GCATAACTATAAGCCAGGCA,GCATAACTATAAGCCAGGCA,NGG,81,2:2 | 3:79,0.701466,0.0605129,1,NC_000006.12:3711347-3711369,+,
+chr6:3721936-3721966,chr6:3721936-3721966.0,GCTGAGCAGGGGATGAGGTT,GCTGAGCAGGGGATGAGGTT,NGG,65,2:2 | 3:63,0.360911,0.149928,1,NC_000006.12:3721936-3721958,+,
+chr6:3721936-3721966,chr6:3721936-3721966.1,CTGAGCAGGGGATGAGGTTG,CTGAGCAGGGGATGAGGTTG,NGG,119,2:3 | 3:116,0.418175,0.0657637,2,NC_000006.12:3721937-3721959,+,
+chr6:3732802-3732832,chr6:3732802-3732832.0,TGTCTCTGCTCTCATGATGT,ACATCATGAGAGCAGAGACA,NGG,52,2:0 | 3:52,0.502147,0.189962,1,NC_000006.12:3732802-3732824,-,
+chr6:3776294-3776324,chr6:3776294-3776324.0,TCTACTACATCAGTGTCTAT,TCTACTACATCAGTGTCTAT,NGG,25,2:1 | 3:24,0.585049,0.264915,1,NC_000006.12:3776297-3776319,+,
+chr6:3776294-3776324,chr6:3776294-3776324.1,ATCTACTACATCAGTGTCTA,ATCTACTACATCAGTGTCTA,NGG,30,2:0 | 3:30,0.254816,0.198122,2,NC_000006.12:3776296-3776318,+,
+chr6:4018256-4018286,chr6:4018256-4018286.0,AGCCTCGGGCAGGTACACTT,AGCCTCGGGCAGGTACACTT,NGG,3,2:0 | 3:3,0.567785,0.485999,1,NC_000006.12:4018258-4018280,+,
+chr6:4018256-4018286,chr6:4018256-4018286.1,AAAGTGTACCTGCCCGAGGC,GCCTCGGGCAGGTACACTTT,NGG,8,2:0 | 3:8,0.455036,0.771144,2,NC_000006.12:4018256-4018278,-,
+chr6:4018256-4018286,chr6:4018256-4018286.2,CACCAAAGTGTACCTGCCCG,CGGGCAGGTACACTTTGGTG,NGG,8,2:0 | 3:8,0.691495,0.474459,3,NC_000006.12:4018260-4018282,-,
+chr6:4018256-4018286,chr6:4018256-4018286.3,CGGGCAGGTACACTTTGGTG,CGGGCAGGTACACTTTGGTG,NGG,10,2:0 | 3:10,0.623168,0.503527,4,NC_000006.12:4018263-4018285,+,
+chr6:4018970-4019000,chr6:4018970-4019000.0,GTTACAATTAAAGCAAACAT,ATGTTTGCTTTAATTGTAAC,NGG,60,2:0 | 3:60,0.667469,0.150435,1,NC_000006.12:4018970-4018992,-,
+chr8:16840054-16840084,chr8:16840054-16840084.0,ATTCTTGGTTGGGGATTGAG,ATTCTTGGTTGGGGATTGAG,NGG,41,2:1 | 3:40,0.496252,0.112747,1,NC_000008.11:16840062-16840084,+,
+chr8:27369257-27369287,chr8:27369257-27369287.0,TCCCCCTACATGCCAGTGAA,TTCACTGGCATGTAGGGGGA,NGG,15,2:2 | 3:13,0.592527,0.261018,1,NC_000008.11:27369261-27369283,-,
+chr8:27369257-27369287,chr8:27369257-27369287.1,GTCCCCCTACATGCCAGTGA,TCACTGGCATGTAGGGGGAC,NGG,15,2:0 | 3:15,0.545018,0.246548,2,NC_000008.11:27369262-27369284,-,
+chr8:27369257-27369287,chr8:27369257-27369287.2,GATCCCTTCACTGGCATGTA,GATCCCTTCACTGGCATGTA,NGG,17,2:0 | 3:17,0.431524,0.347624,3,NC_000008.11:27369258-27369280,+,
+chr8:27369257-27369287,chr8:27369257-27369287.3,ATCCCTTCACTGGCATGTAG,ATCCCTTCACTGGCATGTAG,NGG,30,2:0 | 3:30,0.605535,0.245238,4,NC_000008.11:27369259-27369281,+,
+chr8:27369257-27369287,chr8:27369257-27369287.4,GGATCCCTTCACTGGCATGT,GGATCCCTTCACTGGCATGT,NGG,31,2:0 | 3:31,0.522998,0.211116,5,NC_000008.11:27369257-27369279,+,
+chr8:27558043-27558073,chr8:27558043-27558073.0,CTTGTGTTGGCCACAGCCCC,CTTGTGTTGGCCACAGCCCC,NGG,46,2:3 | 3:43,0.213663,0.181998,1,NC_000008.11:27558051-27558073,+,
+chr8:27572973-27573003,chr8:27572973-27573003.0,TGGAATGCTCCTGTCCTCGA,TCGAGGACAGGAGCATTCCA,NGG,6,2:0 | 3:6,0.564438,0.74068,1,NC_000008.11:27572975-27572997,-,
+chr8:27572973-27573003,chr8:27572973-27573003.1,CGAGGACAGGAGCATTCCAC,CGAGGACAGGAGCATTCCAC,NGG,8,2:0 | 3:8,0.528797,0.634385,2,NC_000008.11:27572979-27573001,+,
+chr8:27572973-27573003,chr8:27572973-27573003.2,TCGAGGACAGGAGCATTCCA,TCGAGGACAGGAGCATTCCA,NGG,13,2:2 | 3:11,0.569691,0.273222,3,NC_000008.11:27572978-27573000,+,
+chr8:27603959-27603989,chr8:27603959-27603989.0,CAGAATCACCGGGGAGTCCC,CAGAATCACCGGGGAGTCCC,NGG,36,2:0 | 3:36,0.349239,0.198049,1,NC_000008.11:27603967-27603989,+,
+chr8:27632426-27632456,chr8:27632426-27632456.0,GACATTGAAAGCCCACCTCT,AGAGGTGGGCTTTCAATGTC,NGG,16,2:0 | 3:16,0.478053,0.39443,1,NC_000008.11:27632431-27632453,-,
+chr8:27632426-27632456,chr8:27632426-27632456.1,ACATTGAAAGCCCACCTCTT,AAGAGGTGGGCTTTCAATGT,NGG,25,2:1 | 3:24,0.414887,0.315446,2,NC_000008.11:27632430-27632452,-,
+chr8:27632426-27632456,chr8:27632426-27632456.2,CATTGAAAGCCCACCTCTTG,CAAGAGGTGGGCTTTCAATG,NGG,27,2:3 | 3:24,0.545741,0.311931,3,NC_000008.11:27632429-27632451,-,
+chr8:27632426-27632456,chr8:27632426-27632456.3,AAGAGGTGGGCTTTCAATGT,AAGAGGTGGGCTTTCAATGT,NGG,37,2:2 | 3:35,0.576364,0.322885,4,NC_000008.11:27632433-27632455,+,
+chr8:143868121-143868151,chr8:143868121-143868151.0,GTCGAAGTAGCCGCAGCGGT,GTCGAAGTAGCCGCAGCGGT,NGG,16,2:5 | 3:11,0.645633,0.41051,1,NC_000008.11:143868121-143868143,+,"epiplakin 1, transcript variant X2"
+chr9:27491928-27491958,chr9:27491928-27491958.0,TTTGATATCACTACTTTTAT,TTTGATATCACTACTTTTAT,NGG,77,2:0 | 3:77,0.120513,0.122023,1,NC_000009.12:27491930-27491952,+,
+chr9:27511270-27511300,chr9:27511270-27511300.0,TAACAGTTTAATAGAAAATC,TAACAGTTTAATAGAAAATC,NGG,94,2:1 | 3:93,0.369319,0.0828511,1,NC_000009.12:27511278-27511300,+,

data/GuideScan2/GuideScan2_30bp_NGG.csv

@@ -0,0 +1,352 @@
+query,Region-name,gRNA-ID,gRNA-Seq,Target-Seq,PAM,Number of off-targets,Off-target summary,Cutting efficiency,Specificity,Rank,Coordinates,Strand,Annotations
+rs147288664,chr1:152220435-152220465,chr1:152220435-152220465.0,GACGTGAGCTGGAGCCATGT,GACGTGAGCTGGAGCCATGT,NGG,18,2:0 | 3:18,0.602148,0.29527,1,NC_000001.11:152220443-152220465,+,hornerin
+rs147288664,chr1:152220435-152220465,chr1:152220435-152220465.0,GACGTGAGCTGGAGCCATGT,GACGTGAGCTGGAGCCATGT,NGG,18,2:0 | 3:18,0.602148,0.29527,1,NC_000001.11:152220443-152220465,+,hornerin
+rs147288664,chr1:152220435-152220465,chr1:152220435-152220465.0,GACGTGAGCTGGAGCCATGT,GACGTGAGCTGGAGCCATGT,NGG,18,2:0 | 3:18,0.602148,0.29527,1,NC_000001.11:152220443-152220465,+,hornerin
+rs12726330,chr1:155135675-155135705,chr1:155135675-155135705.0,AGAGGTCTGGACCAGGGTAC,AGAGGTCTGGACCAGGGTAC,NGG,26,2:0 | 3:26,0.361226,0.28323,1,NC_000001.11:155135677-155135699,+,
+rs12726330,chr1:155135675-155135705,chr1:155135675-155135705.1,GAGGTCTGGACCAGGGTACT,GAGGTCTGGACCAGGGTACT,NGG,38,2:1 | 3:37,0.500068,0.188367,2,NC_000001.11:155135678-155135700,+,
+rs12726330,chr1:155135675-155135705,chr1:155135675-155135705.2,TCTGGACCAGGGTACTGGGA,TCTGGACCAGGGTACTGGGA,NGG,53,2:0 | 3:53,0.564113,0.0963628,3,NC_000001.11:155135682-155135704,+,
+rs12726330,chr1:155135675-155135705,chr1:155135675-155135705.0,AGAGGTCTGGACCAGGGTAC,AGAGGTCTGGACCAGGGTAC,NGG,26,2:0 | 3:26,0.361226,0.28323,1,NC_000001.11:155135677-155135699,+,
+rs12726330,chr1:155135675-155135705,chr1:155135675-155135705.1,GAGGTCTGGACCAGGGTACT,GAGGTCTGGACCAGGGTACT,NGG,38,2:1 | 3:37,0.500068,0.188367,2,NC_000001.11:155135678-155135700,+,
+rs12726330,chr1:155135675-155135705,chr1:155135675-155135705.2,TCTGGACCAGGGTACTGGGA,TCTGGACCAGGGTACTGGGA,NGG,53,2:0 | 3:53,0.564113,0.0963628,3,NC_000001.11:155135682-155135704,+,
+rs71630614,chr1:156102410-156102440,chr1:156102410-156102440.0,TGGTTCTGTCACCTCTGGTT,TGGTTCTGTCACCTCTGGTT,NGG,37,2:1 | 3:36,0.425775,0.231612,1,NC_000001.11:156102415-156102437,+,
+rs71630614,chr1:156102410-156102440,chr1:156102410-156102440.1,TAACCAGAGGTGACAGAACC,GGTTCTGTCACCTCTGGTTA,NGG,39,2:0 | 3:39,0.503448,0.196528,2,NC_000001.11:156102413-156102435,-,
+rs71630614,chr1:156102410-156102440,chr1:156102410-156102440.2,AGTCCTGGTTCTGTCACCTC,AGTCCTGGTTCTGTCACCTC,NGG,62,2:3 | 3:59,0.413392,0.181194,3,NC_000001.11:156102410-156102432,+,
+rs55636820,chr2:127054664-127054694,chr2:127054664-127054694.0,CAGAACCACCCGGGGCACTT,CAGAACCACCCGGGGCACTT,NGG,18,2:0 | 3:18,0.545087,0.402611,1,NC_000002.12:127054669-127054691,+,
+rs55636820,chr2:127054664-127054694,chr2:127054664-127054694.1,TCAGAACCACCCGGGGCACT,TCAGAACCACCCGGGGCACT,NGG,23,2:3 | 3:20,0.367228,0.187601,2,NC_000002.12:127054668-127054690,+,
+rs1060743,chr2:127068941-127068971,chr2:127068941-127068971.0,CCTTCAAACTGCCAAAAAGA,TCTTTTTGGCAGTTTGAAGG,NGG,47,2:6 | 3:41,0.514893,0.145272,1,NC_000002.12:127068944-127068966,-,"bridging integrator 1, transcript variant 15"
+rs1060743,chr2:127068941-127068971,chr2:127068941-127068971.1,CTTCTTTTTGGCAGTTTGAA,CTTCTTTTTGGCAGTTTGAA,NGG,82,2:6 | 3:76,0.418752,0.0827677,2,NC_000002.12:127068945-127068967,+,"bridging integrator 1, transcript variant 15"
+rs11694743,chr2:127085015-127085045,chr2:127085015-127085045.0,CGGGGGATGGAGGGAGAACA,TGTTCTCCCTCCATCCCCCG,NGG,124,2:7 | 3:117,0.50273,0.0595081,1,NC_000002.12:127085016-127085038,-,
+rs4663096,chr2:127104174-127104204,chr2:127104174-127104204.0,TTGGGCCTGACGCAGGCTGA,TCAGCCTGCGTCAGGCCCAA,NGG,14,2:0 | 3:14,0.500127,0.470201,1,NC_000002.12:127104177-127104199,-,
+rs4663096,chr2:127104174-127104204,chr2:127104174-127104204.1,GGCCTGACGCAGGCTGATGG,CCATCAGCCTGCGTCAGGCC,NGG,38,2:2 | 3:36,0.556309,0.211083,2,NC_000002.12:127104174-127104196,-,
+rs57891859,chr2:134707030-134707060,chr2:134707030-134707060.0,TCGTTCCCAAGCACACCCAC,TCGTTCCCAAGCACACCCAC,NGG,8,2:0 | 3:8,0.545964,0.581435,1,NC_000002.12:134707038-134707060,+,
+rs57891859,chr2:134707030-134707060,chr2:134707030-134707060.0,TCGTTCCCAAGCACACCCAC,TCGTTCCCAAGCACACCCAC,NGG,8,2:0 | 3:8,0.545964,0.581435,1,NC_000002.12:134707038-134707060,+,
+rs57891859,chr2:134707030-134707060,chr2:134707030-134707060.0,TCGTTCCCAAGCACACCCAC,TCGTTCCCAAGCACACCCAC,NGG,8,2:0 | 3:8,0.545964,0.581435,1,NC_000002.12:134707038-134707060,+,
+rs2390669,chr2:168235416-168235446,chr2:168235416-168235446.0,TTAGGGCAGAATCACGAGCC,TTAGGGCAGAATCACGAGCC,NGG,8,2:0 | 3:8,0.494537,0.523128,1,NC_000002.12:168235419-168235441,+,
+rs2390669,chr2:168235416-168235446,chr2:168235416-168235446.1,TAGGGCAGAATCACGAGCCT,TAGGGCAGAATCACGAGCCT,NGG,9,2:0 | 3:9,0.556263,0.335089,2,NC_000002.12:168235420-168235442,+,
+rs4488803,chr3:58232609-58232639,chr3:58232609-58232639.0,ATACTGAGGCCCTCATCACA,TGTGATGAGGGCCTCAGTAT,NGG,16,2:0 | 3:16,0.633511,0.393238,1,NC_000003.12:58232613-58232635,-,
+rs4488803,chr3:58232609-58232639,chr3:58232609-58232639.0,ATACTGAGGCCCTCATCACA,TGTGATGAGGGCCTCAGTAT,NGG,16,2:0 | 3:16,0.633511,0.393238,1,NC_000003.12:58232613-58232635,-,
+rs73177394,chr3:182990283-182990313,chr3:182990283-182990313.0,CCAACTACGGTGAAGTTACA,TGTAACTTCACCGTAGTTGG,NGG,8,2:0 | 3:8,0.449991,0.445935,1,NC_000003.12:182990284-182990306,-,
+rs45486093,chr4:881867-881897,chr4:881867-881897.0,GAGCTGTCCCCTGTCCCCGG,GAGCTGTCCCCTGTCCCCGG,NGG,27,2:2 | 3:25,0.624795,0.156403,1,NC_000004.12:881872-881894,+,
+rs45486093,chr4:881867-881897,chr4:881867-881897.1,AGCTGTCCCCTGTCCCCGGA,AGCTGTCCCCTGTCCCCGGA,NGG,29,2:0 | 3:29,0.573428,0.163055,2,NC_000004.12:881873-881895,+,
+rs45486093,chr4:881867-881897,chr4:881867-881897.2,ACAGAGCTGTCCCCTGTCCC,ACAGAGCTGTCCCCTGTCCC,NGG,85,2:3 | 3:82,0.507979,0.0783536,3,NC_000004.12:881869-881891,+,
+rs6599388,chr4:945283-945313,chr4:945283-945313.0,GACAGAGACGGCGGGGGCCT,AGGCCCCCGCCGTCTCTGTC,NGG,30,2:0 | 3:30,0.298226,0.184312,1,NC_000004.12:945287-945309,-,
+rs6599388,chr4:945283-945313,chr4:945283-945313.1,ACAGAGACGGCGGGGGCCTG,CAGGCCCCCGCCGTCTCTGT,NGG,36,2:1 | 3:35,0.310371,0.100642,2,NC_000004.12:945286-945308,-,
+rs6599388,chr4:945283-945313,chr4:945283-945313.2,AGACAGAGACGGCGGGGGCC,GGCCCCCGCCGTCTCTGTCT,NGG,40,2:3 | 3:37,0.287769,0.159264,3,NC_000004.12:945288-945310,-,
+rs6599389,chr4:945309-945339,chr4:945309-945339.0,GCAACAAACGGCGGGGAGTG,CACTCCCCGCCGTTTGTTGC,NGG,9,2:0 | 3:9,0.544418,0.400953,1,NC_000004.12:945311-945333,-,
+rs6599389,chr4:945309-945339,chr4:945309-945339.0,GCAACAAACGGCGGGGAGTG,CACTCCCCGCCGTTTGTTGC,NGG,9,2:0 | 3:9,0.544418,0.400953,1,NC_000004.12:945311-945333,-,
+rs3733344,chr4:957236-957266,chr4:957236-957266.0,CATCGGGAAGTGAAGGACAG,CTGTCCTTCACTTCCCGATG,NGG,34,2:1 | 3:33,0.700879,0.153288,1,NC_000004.12:957238-957260,-,
+rs3733344,chr4:957236-957266,chr4:957236-957266.0,CATCGGGAAGTGAAGGACAG,CTGTCCTTCACTTCCCGATG,NGG,34,2:1 | 3:33,0.700879,0.153288,1,NC_000004.12:957238-957260,-,
+rs3733344,chr4:957236-957266,chr4:957236-957266.0,CATCGGGAAGTGAAGGACAG,CTGTCCTTCACTTCCCGATG,NGG,34,2:1 | 3:33,0.700879,0.153288,1,NC_000004.12:957238-957260,-,
+rs34311866,chr4:958143-958173,chr4:958143-958173.0,CCGTGGTCCACATGGCCAGC,GCTGGCCATGTGGACCACGG,NGG,20,2:0 | 3:20,0.488199,0.250671,1,NC_000004.12:958148-958170,-,"transmembrane protein 175, transcript variant X3;transmembrane protein 175, transcript variant X3"
+rs34311866,chr4:958143-958173,chr4:958143-958173.1,CCAGCTGGCCATGTGGACCA,CCAGCTGGCCATGTGGACCA,NGG,56,2:2 | 3:54,0.601148,0.180607,2,NC_000004.12:958148-958170,+,"transmembrane protein 175, transcript variant X3;transmembrane protein 175, transcript variant X3"
+rs17783233,chr4:982794-982824,chr4:982794-982824.0,CCCCAGGGTTTATTTCAGTG,CACTGAAATAAACCCTGGGG,NGG,23,2:0 | 3:23,0.612583,0.294009,1,NC_000004.12:982799-982821,-,
+rs17783233,chr4:982794-982824,chr4:982794-982824.1,ACCTCACTGAAATAAACCCT,ACCTCACTGAAATAAACCCT,NGG,28,2:2 | 3:26,0.492692,0.2652,2,NC_000004.12:982798-982820,+,
+rs17783233,chr4:982794-982824,chr4:982794-982824.2,CACCTCACTGAAATAAACCC,CACCTCACTGAAATAAACCC,NGG,30,2:1 | 3:29,0.52486,0.187367,3,NC_000004.12:982797-982819,+,
+rs17783233,chr4:982794-982824,chr4:982794-982824.3,GGGTTTATTTCAGTGAGGTG,CACCTCACTGAAATAAACCC,NGG,42,2:2 | 3:40,0.498538,0.198717,4,NC_000004.12:982794-982816,-,
+rs17783233,chr4:982794-982824,chr4:982794-982824.4,CCTCACTGAAATAAACCCTG,CCTCACTGAAATAAACCCTG,NGG,51,2:0 | 3:51,0.773843,0.140854,5,NC_000004.12:982799-982821,+,
+rs4373155,chr4:11021159-11021189,chr4:11021159-11021189.0,GGTCTGTGTGTATGCAGAAC,GGTCTGTGTGTATGCAGAAC,NGG,46,2:1 | 3:45,0.47714,0.0925846,1,NC_000004.12:11021165-11021187,+,
+rs4373155,chr4:11021159-11021189,chr4:11021159-11021189.0,GGTCTGTGTGTATGCAGAAC,GGTCTGTGTGTATGCAGAAC,NGG,46,2:1 | 3:45,0.47714,0.0925846,1,NC_000004.12:11021165-11021187,+,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.0,GAAGTTCCAAGCCACCAGGA,TCCTGGTGGCTTGGAACTTC,NGG,22,2:2 | 3:20,0.656923,0.198947,1,NC_000004.12:15722027-15722049,-,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.1,AAGTTCCAAGCCACCAGGAG,CTCCTGGTGGCTTGGAACTT,NGG,27,2:0 | 3:27,0.599495,0.343418,2,NC_000004.12:15722026-15722048,-,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.2,TGAAGTTCCAAGCCACCAGG,CCTGGTGGCTTGGAACTTCA,NGG,43,2:2 | 3:41,0.674281,0.226414,3,NC_000004.12:15722028-15722050,-,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.3,TCCAAGCCACCAGGAGGGGA,TCCCCTCCTGGTGGCTTGGA,NGG,57,2:3 | 3:54,0.50192,0.0925385,4,NC_000004.12:15722022-15722044,-,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.0,GAAGTTCCAAGCCACCAGGA,TCCTGGTGGCTTGGAACTTC,NGG,22,2:2 | 3:20,0.656923,0.198947,1,NC_000004.12:15722027-15722049,-,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.1,AAGTTCCAAGCCACCAGGAG,CTCCTGGTGGCTTGGAACTT,NGG,27,2:0 | 3:27,0.599495,0.343418,2,NC_000004.12:15722026-15722048,-,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.2,TGAAGTTCCAAGCCACCAGG,CCTGGTGGCTTGGAACTTCA,NGG,43,2:2 | 3:41,0.674281,0.226414,3,NC_000004.12:15722028-15722050,-,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.3,TCCAAGCCACCAGGAGGGGA,TCCCCTCCTGGTGGCTTGGA,NGG,57,2:3 | 3:54,0.50192,0.0925385,4,NC_000004.12:15722022-15722044,-,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.0,GAAGTTCCAAGCCACCAGGA,TCCTGGTGGCTTGGAACTTC,NGG,22,2:2 | 3:20,0.656923,0.198947,1,NC_000004.12:15722027-15722049,-,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.1,AAGTTCCAAGCCACCAGGAG,CTCCTGGTGGCTTGGAACTT,NGG,27,2:0 | 3:27,0.599495,0.343418,2,NC_000004.12:15722026-15722048,-,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.2,TGAAGTTCCAAGCCACCAGG,CCTGGTGGCTTGGAACTTCA,NGG,43,2:2 | 3:41,0.674281,0.226414,3,NC_000004.12:15722028-15722050,-,
+rs9291637,chr4:15722022-15722052,chr4:15722022-15722052.3,TCCAAGCCACCAGGAGGGGA,TCCCCTCCTGGTGGCTTGGA,NGG,57,2:3 | 3:54,0.50192,0.0925385,4,NC_000004.12:15722022-15722044,-,
+rs1430961,chr4:89631753-89631783,chr4:89631753-89631783.0,CTCCATTCAACTATTACTCA,TGAGTAATAGTTGAATGGAG,NGG,21,2:0 | 3:21,0.502226,0.28123,1,NC_000004.12:89631761-89631783,-,
+rs1430961,chr4:89631753-89631783,chr4:89631753-89631783.1,AACCTTGAGTAATAGTTGAA,AACCTTGAGTAATAGTTGAA,NGG,27,2:0 | 3:27,0.478791,0.195097,2,NC_000004.12:89631759-89631781,+,
+rs1430961,chr4:89631753-89631783,chr4:89631753-89631783.0,CTCCATTCAACTATTACTCA,TGAGTAATAGTTGAATGGAG,NGG,21,2:0 | 3:21,0.502226,0.28123,1,NC_000004.12:89631761-89631783,-,
+rs1430961,chr4:89631753-89631783,chr4:89631753-89631783.1,AACCTTGAGTAATAGTTGAA,AACCTTGAGTAATAGTTGAA,NGG,27,2:0 | 3:27,0.478791,0.195097,2,NC_000004.12:89631759-89631781,+,
+rs356162,chr4:89775990-89776020,chr4:89775990-89776020.0,AATATCTGTTATTGGTACTG,CAGTACCAATAACAGATATT,NGG,30,2:6 | 3:24,0.693501,0.239941,1,NC_000004.12:89775994-89776016,-,
+rs3775434,chr4:89781614-89781644,chr4:89781614-89781644.0,AGTAAATGTGAGCTGCAATC,GATTGCAGCTCACATTTACT,NGG,21,2:0 | 3:21,0.45527,0.357212,1,NC_000004.12:89781616-89781638,-,
+rs143202663,chr6:40897485-40897515,chr6:40897485-40897515.0,CATACGTCTAGAGCCACCCC,CATACGTCTAGAGCCACCCC,NGG,3,2:0 | 3:3,0.673258,0.452072,1,NC_000006.12:40897493-40897515,+,
+rs143332484,chr6:41161453-41161483,chr6:41161453-41161483.0,GTGCTGACCACACGCTGGCA,GTGCTGACCACACGCTGGCA,NGG,11,2:0 | 3:11,0.451294,0.472599,1,NC_000006.12:41161457-41161479,+,"triggering receptor expressed on myeloid cells 2, transcript variant 2"
+rs143332484,chr6:41161453-41161483,chr6:41161453-41161483.1,TGCTGACCACACGCTGGCAT,TGCTGACCACACGCTGGCAT,NGG,16,2:0 | 3:16,0.434833,0.357426,2,NC_000006.12:41161458-41161480,+,"triggering receptor expressed on myeloid cells 2, transcript variant 2"
+rs143332484,chr6:41161453-41161483,chr6:41161453-41161483.0,GTGCTGACCACACGCTGGCA,GTGCTGACCACACGCTGGCA,NGG,11,2:0 | 3:11,0.451294,0.472599,1,NC_000006.12:41161457-41161479,+,"triggering receptor expressed on myeloid cells 2, transcript variant 2"
+rs143332484,chr6:41161453-41161483,chr6:41161453-41161483.1,TGCTGACCACACGCTGGCAT,TGCTGACCACACGCTGGCAT,NGG,16,2:0 | 3:16,0.434833,0.357426,2,NC_000006.12:41161458-41161480,+,"triggering receptor expressed on myeloid cells 2, transcript variant 2"
+rs620490,chr8:16840054-16840084,chr8:16840054-16840084.0,ATTCTTGGTTGGGGATTGAG,ATTCTTGGTTGGGGATTGAG,NGG,41,2:1 | 3:40,0.496252,0.112747,1,NC_000008.11:16840062-16840084,+,
+rs620490,chr8:16840054-16840084,chr8:16840054-16840084.0,ATTCTTGGTTGGGGATTGAG,ATTCTTGGTTGGGGATTGAG,NGG,41,2:1 | 3:40,0.496252,0.112747,1,NC_000008.11:16840062-16840084,+,
+rs620490,chr8:16840054-16840084,chr8:16840054-16840084.0,ATTCTTGGTTGGGGATTGAG,ATTCTTGGTTGGGGATTGAG,NGG,41,2:1 | 3:40,0.496252,0.112747,1,NC_000008.11:16840062-16840084,+,
+rs755951,chr8:27369257-27369287,chr8:27369257-27369287.0,TCCCCCTACATGCCAGTGAA,TTCACTGGCATGTAGGGGGA,NGG,15,2:2 | 3:13,0.592527,0.261018,1,NC_000008.11:27369261-27369283,-,
+rs755951,chr8:27369257-27369287,chr8:27369257-27369287.1,GTCCCCCTACATGCCAGTGA,TCACTGGCATGTAGGGGGAC,NGG,15,2:0 | 3:15,0.545018,0.246548,2,NC_000008.11:27369262-27369284,-,
+rs755951,chr8:27369257-27369287,chr8:27369257-27369287.2,GATCCCTTCACTGGCATGTA,GATCCCTTCACTGGCATGTA,NGG,17,2:0 | 3:17,0.431524,0.347624,3,NC_000008.11:27369258-27369280,+,
+rs755951,chr8:27369257-27369287,chr8:27369257-27369287.3,ATCCCTTCACTGGCATGTAG,ATCCCTTCACTGGCATGTAG,NGG,30,2:0 | 3:30,0.605535,0.245238,4,NC_000008.11:27369259-27369281,+,
+rs755951,chr8:27369257-27369287,chr8:27369257-27369287.4,GGATCCCTTCACTGGCATGT,GGATCCCTTCACTGGCATGT,NGG,31,2:0 | 3:31,0.522998,0.211116,5,NC_000008.11:27369257-27369279,+,
+rs755951,chr8:27369257-27369287,chr8:27369257-27369287.0,TCCCCCTACATGCCAGTGAA,TTCACTGGCATGTAGGGGGA,NGG,15,2:2 | 3:13,0.592527,0.261018,1,NC_000008.11:27369261-27369283,-,
+rs755951,chr8:27369257-27369287,chr8:27369257-27369287.1,GTCCCCCTACATGCCAGTGA,TCACTGGCATGTAGGGGGAC,NGG,15,2:0 | 3:15,0.545018,0.246548,2,NC_000008.11:27369262-27369284,-,
+rs755951,chr8:27369257-27369287,chr8:27369257-27369287.2,GATCCCTTCACTGGCATGTA,GATCCCTTCACTGGCATGTA,NGG,17,2:0 | 3:17,0.431524,0.347624,3,NC_000008.11:27369258-27369280,+,
+rs755951,chr8:27369257-27369287,chr8:27369257-27369287.3,ATCCCTTCACTGGCATGTAG,ATCCCTTCACTGGCATGTAG,NGG,30,2:0 | 3:30,0.605535,0.245238,4,NC_000008.11:27369259-27369281,+,
+rs755951,chr8:27369257-27369287,chr8:27369257-27369287.4,GGATCCCTTCACTGGCATGT,GGATCCCTTCACTGGCATGT,NGG,31,2:0 | 3:31,0.522998,0.211116,5,NC_000008.11:27369257-27369279,+,
+rs2640724,chr8:27558043-27558073,chr8:27558043-27558073.0,CTTGTGTTGGCCACAGCCCC,CTTGTGTTGGCCACAGCCCC,NGG,46,2:3 | 3:43,0.213663,0.181998,1,NC_000008.11:27558051-27558073,+,
+rs7831810,chr8:27572973-27573003,chr8:27572973-27573003.0,TGGAATGCTCCTGTCCTCGA,TCGAGGACAGGAGCATTCCA,NGG,6,2:0 | 3:6,0.564438,0.74068,1,NC_000008.11:27572975-27572997,-,
+rs7831810,chr8:27572973-27573003,chr8:27572973-27573003.1,CGAGGACAGGAGCATTCCAC,CGAGGACAGGAGCATTCCAC,NGG,8,2:0 | 3:8,0.528797,0.634385,2,NC_000008.11:27572979-27573001,+,
+rs7831810,chr8:27572973-27573003,chr8:27572973-27573003.2,TCGAGGACAGGAGCATTCCA,TCGAGGACAGGAGCATTCCA,NGG,13,2:2 | 3:11,0.569691,0.273222,3,NC_000008.11:27572978-27573000,+,
+rs7831810,chr8:27572973-27573003,chr8:27572973-27573003.0,TGGAATGCTCCTGTCCTCGA,TCGAGGACAGGAGCATTCCA,NGG,6,2:0 | 3:6,0.564438,0.74068,1,NC_000008.11:27572975-27572997,-,
+rs7831810,chr8:27572973-27573003,chr8:27572973-27573003.1,CGAGGACAGGAGCATTCCAC,CGAGGACAGGAGCATTCCAC,NGG,8,2:0 | 3:8,0.528797,0.634385,2,NC_000008.11:27572979-27573001,+,
+rs7831810,chr8:27572973-27573003,chr8:27572973-27573003.2,TCGAGGACAGGAGCATTCCA,TCGAGGACAGGAGCATTCCA,NGG,13,2:2 | 3:11,0.569691,0.273222,3,NC_000008.11:27572978-27573000,+,
+rs7831810,chr8:27572973-27573003,chr8:27572973-27573003.0,TGGAATGCTCCTGTCCTCGA,TCGAGGACAGGAGCATTCCA,NGG,6,2:0 | 3:6,0.564438,0.74068,1,NC_000008.11:27572975-27572997,-,
+rs7831810,chr8:27572973-27573003,chr8:27572973-27573003.1,CGAGGACAGGAGCATTCCAC,CGAGGACAGGAGCATTCCAC,NGG,8,2:0 | 3:8,0.528797,0.634385,2,NC_000008.11:27572979-27573001,+,
+rs7831810,chr8:27572973-27573003,chr8:27572973-27573003.2,TCGAGGACAGGAGCATTCCA,TCGAGGACAGGAGCATTCCA,NGG,13,2:2 | 3:11,0.569691,0.273222,3,NC_000008.11:27572978-27573000,+,
+rs4732729,chr8:27603959-27603989,chr8:27603959-27603989.0,CAGAATCACCGGGGAGTCCC,CAGAATCACCGGGGAGTCCC,NGG,36,2:0 | 3:36,0.349239,0.198049,1,NC_000008.11:27603967-27603989,+,
+rs4732729,chr8:27603959-27603989,chr8:27603959-27603989.0,CAGAATCACCGGGGAGTCCC,CAGAATCACCGGGGAGTCCC,NGG,36,2:0 | 3:36,0.349239,0.198049,1,NC_000008.11:27603967-27603989,+,
+rs485902,chr8:27632426-27632456,chr8:27632426-27632456.0,GACATTGAAAGCCCACCTCT,AGAGGTGGGCTTTCAATGTC,NGG,16,2:0 | 3:16,0.478053,0.39443,1,NC_000008.11:27632431-27632453,-,
+rs485902,chr8:27632426-27632456,chr8:27632426-27632456.1,ACATTGAAAGCCCACCTCTT,AAGAGGTGGGCTTTCAATGT,NGG,25,2:1 | 3:24,0.414887,0.315446,2,NC_000008.11:27632430-27632452,-,
+rs485902,chr8:27632426-27632456,chr8:27632426-27632456.2,CATTGAAAGCCCACCTCTTG,CAAGAGGTGGGCTTTCAATG,NGG,27,2:3 | 3:24,0.545741,0.311931,3,NC_000008.11:27632429-27632451,-,
+rs485902,chr8:27632426-27632456,chr8:27632426-27632456.3,AAGAGGTGGGCTTTCAATGT,AAGAGGTGGGCTTTCAATGT,NGG,37,2:2 | 3:35,0.576364,0.322885,4,NC_000008.11:27632433-27632455,+,
+rs485902,chr8:27632426-27632456,chr8:27632426-27632456.0,GACATTGAAAGCCCACCTCT,AGAGGTGGGCTTTCAATGTC,NGG,16,2:0 | 3:16,0.478053,0.39443,1,NC_000008.11:27632431-27632453,-,
+rs485902,chr8:27632426-27632456,chr8:27632426-27632456.1,ACATTGAAAGCCCACCTCTT,AAGAGGTGGGCTTTCAATGT,NGG,25,2:1 | 3:24,0.414887,0.315446,2,NC_000008.11:27632430-27632452,-,
+rs485902,chr8:27632426-27632456,chr8:27632426-27632456.2,CATTGAAAGCCCACCTCTTG,CAAGAGGTGGGCTTTCAATG,NGG,27,2:3 | 3:24,0.545741,0.311931,3,NC_000008.11:27632429-27632451,-,
+rs485902,chr8:27632426-27632456,chr8:27632426-27632456.3,AAGAGGTGGGCTTTCAATGT,AAGAGGTGGGCTTTCAATGT,NGG,37,2:2 | 3:35,0.576364,0.322885,4,NC_000008.11:27632433-27632455,+,
+rs112136718,chr8:143868121-143868151,chr8:143868121-143868151.0,GTCGAAGTAGCCGCAGCGGT,GTCGAAGTAGCCGCAGCGGT,NGG,16,2:5 | 3:11,0.645633,0.41051,1,NC_000008.11:143868121-143868143,+,"epiplakin 1, transcript variant X2"
+rs112136718,chr8:143868121-143868151,chr8:143868121-143868151.0,GTCGAAGTAGCCGCAGCGGT,GTCGAAGTAGCCGCAGCGGT,NGG,16,2:5 | 3:11,0.645633,0.41051,1,NC_000008.11:143868121-143868143,+,"epiplakin 1, transcript variant X2"
+rs139185008,chr9:27491928-27491958,chr9:27491928-27491958.0,TTTGATATCACTACTTTTAT,TTTGATATCACTACTTTTAT,NGG,77,2:0 | 3:77,0.120513,0.122023,1,NC_000009.12:27491930-27491952,+,
+rs2484314,chr9:27511270-27511300,chr9:27511270-27511300.0,TAACAGTTTAATAGAAAATC,TAACAGTTTAATAGAAAATC,NGG,94,2:1 | 3:93,0.369319,0.0828511,1,NC_000009.12:27511278-27511300,+,
+rs7912495,chr10:11676698-11676728,chr10:11676698-11676728.0,GAAGTGCTTACCGCATATCC,GAAGTGCTTACCGCATATCC,NGG,3,2:0 | 3:3,0.5317,0.566244,1,NC_000010.11:11676700-11676722,+,
+rs7912495,chr10:11676698-11676728,chr10:11676698-11676728.0,GAAGTGCTTACCGCATATCC,GAAGTGCTTACCGCATATCC,NGG,3,2:0 | 3:3,0.5317,0.566244,1,NC_000010.11:11676700-11676722,+,
+rs188789342,chr10:119612800-119612830,chr10:119612800-119612830.0,CAGGCGCCCGCCACCTGTTC,GAACAGGTGGCGGGCGCCTG,NGG,2708,2:53 | 3:2655,0.287138,0.00641668,1,NC_000010.11:119612803-119612825,-,
+rs10769263,chr11:47395616-47395646,chr11:47395616-47395646.0,TCATGGCTATAATAAATCAA,TCATGGCTATAATAAATCAA,NGG,60,2:3 | 3:57,0.513797,0.144882,1,NC_000011.10:47395624-47395646,+,"Spi-1 proto-oncogene, transcript variant X1"
+rs55661415,chr11:60184827-60184857,chr11:60184827-60184857.0,TTCTACCAACCTAACTACAA,TTCTACCAACCTAACTACAA,NGG,15,2:0 | 3:15,0.653775,0.399656,1,NC_000011.10:60184833-60184855,+,
+rs55661415,chr11:60184827-60184857,chr11:60184827-60184857.1,ATTCTACCAACCTAACTACA,ATTCTACCAACCTAACTACA,NGG,30,2:0 | 3:30,0.550719,0.220943,2,NC_000011.10:60184832-60184854,+,
+rs67598967,chr11:86132139-86132169,chr11:86132139-86132169.0,TGACCAGGCCCGGCCGGGCA,TGCCCGGCCGGGCCTGGTCA,NGG,65,2:6 | 3:59,0.526278,0.0755237,1,NC_000011.10:86132147-86132169,-,
+rs11218343,chr11:121564862-121564892,chr11:121564862-121564892.0,TAAAATACTCTATTACCGGC,GCCGGTAATAGAGTATTTTA,NGG,13,2:0 | 3:13,0.47751,0.238824,1,NC_000011.10:121564867-121564889,-,
+rs11218343,chr11:121564862-121564892,chr11:121564862-121564892.1,AAAATACTCTATTACCGGCT,AGCCGGTAATAGAGTATTTT,NGG,31,2:0 | 3:31,0.51914,0.156044,2,NC_000011.10:121564866-121564888,-,
+rs11218343,chr11:121564862-121564892,chr11:121564862-121564892.0,TAAAATACTCTATTACCGGC,GCCGGTAATAGAGTATTTTA,NGG,13,2:0 | 3:13,0.47751,0.238824,1,NC_000011.10:121564867-121564889,-,
+rs11218343,chr11:121564862-121564892,chr11:121564862-121564892.1,AAAATACTCTATTACCGGCT,AGCCGGTAATAGAGTATTTT,NGG,31,2:0 | 3:31,0.51914,0.156044,2,NC_000011.10:121564866-121564888,-,
+rs11223616,chr11:133902927-133902957,chr11:133902927-133902957.0,TGGGGTTTTCATATAAGCCA,TGGCTTATATGAAAACCCCA,NGG,25,2:0 | 3:25,0.527661,0.273097,1,NC_000011.10:133902933-133902955,-,immunoglobulin superfamily member 9B
+rs11223616,chr11:133902927-133902957,chr11:133902927-133902957.1,GTTTTCATATAAGCCATGGG,CCCATGGCTTATATGAAAAC,NGG,31,2:0 | 3:31,0.689368,0.279263,2,NC_000011.10:133902929-133902951,-,immunoglobulin superfamily member 9B
+rs11223616,chr11:133902927-133902957,chr11:133902927-133902957.2,GGGGTTTTCATATAAGCCAT,ATGGCTTATATGAAAACCCC,NGG,35,2:2 | 3:33,0.589318,0.213089,3,NC_000011.10:133902932-133902954,-,immunoglobulin superfamily member 9B
+rs11223616,chr11:133902927-133902957,chr11:133902927-133902957.3,TTTCATATAAGCCATGGGAG,CTCCCATGGCTTATATGAAA,NGG,38,2:0 | 3:38,0.537071,0.164118,4,NC_000011.10:133902927-133902949,-,immunoglobulin superfamily member 9B
+rs11223616,chr11:133902927-133902957,chr11:133902927-133902957.4,TTTTCATATAAGCCATGGGA,TCCCATGGCTTATATGAAAA,NGG,48,2:1 | 3:47,0.586167,0.139321,5,NC_000011.10:133902928-133902950,-,immunoglobulin superfamily member 9B
+rs564123,chr11:133949506-133949536,chr11:133949506-133949536.0,GTTTGGTTTCCCCCTGTATT,AATACAGGGGGAAACCAAAC,NGG,21,2:1 | 3:20,0.19908,0.349993,1,NC_000011.10:133949510-133949532,-,
+rs564123,chr11:133949506-133949536,chr11:133949506-133949536.1,TTTGGTTTCCCCCTGTATTT,AAATACAGGGGGAAACCAAA,NGG,130,2:1 | 3:129,0.312179,0.0515104,2,NC_000011.10:133949509-133949531,-,
+rs564123,chr11:133949506-133949536,chr11:133949506-133949536.0,GTTTGGTTTCCCCCTGTATT,AATACAGGGGGAAACCAAAC,NGG,21,2:1 | 3:20,0.19908,0.349993,1,NC_000011.10:133949510-133949532,-,
+rs564123,chr11:133949506-133949536,chr11:133949506-133949536.1,TTTGGTTTCCCCCTGTATTT,AAATACAGGGGGAAACCAAA,NGG,130,2:1 | 3:129,0.312179,0.0515104,2,NC_000011.10:133949509-133949531,-,
+rs1491942,chr12:40226990-40227020,chr12:40226990-40227020.0,AGTGCTATACTTGACAACCC,AGTGCTATACTTGACAACCC,NGG,9,2:0 | 3:9,0.701704,0.591361,1,NC_000012.12:40226992-40227014,+,
+rs1491942,chr12:40226990-40227020,chr12:40226990-40227020.1,GTGCTATACTTGACAACCCA,GTGCTATACTTGACAACCCA,NGG,14,2:0 | 3:14,0.614097,0.49424,2,NC_000012.12:40226993-40227015,+,
+rs1491942,chr12:40226990-40227020,chr12:40226990-40227020.2,TGCTATACTTGACAACCCAG,TGCTATACTTGACAACCCAG,NGG,14,2:0 | 3:14,0.749446,0.359774,3,NC_000012.12:40226994-40227016,+,
+rs75505347,chr12:40491731-40491761,chr12:40491731-40491761.0,ATTCGTCTTACGATCATAAT,ATTATGATCGTAAGACGAAT,NGG,0,2:0 | 3:0,0.191562,0.995923,1,NC_000012.12:40491736-40491758,-,
+rs1002038473,chr12:41036413-41036443,chr12:41036413-41036443.0,TTAGAGAACCAAGCCAAATG,TTAGAGAACCAAGCCAAATG,NGG,107,2:5 | 3:102,0.601051,0.0924406,1,NC_000012.12:41036416-41036438,+,
+rs1002038473,chr12:41036413-41036443,chr12:41036413-41036443.0,TTAGAGAACCAAGCCAAATG,TTAGAGAACCAAGCCAAATG,NGG,107,2:5 | 3:102,0.601051,0.0924406,1,NC_000012.12:41036416-41036438,+,
+rs764179564,chr12:41195597-41195627,chr12:41195597-41195627.0,ATAAATCAAAGTTTTTTTTT,AAAAAAAAACTTTGATTTAT,NGG,551,2:35 | 3:516,0.124,0.0157566,1,NC_000012.12:41195603-41195625,-,
+rs764179564,chr12:41195597-41195627,chr12:41195597-41195627.0,ATAAATCAAAGTTTTTTTTT,AAAAAAAAACTTTGATTTAT,NGG,551,2:35 | 3:516,0.124,0.0157566,1,NC_000012.12:41195603-41195625,-,
+rs117027576,chr12:56922803-56922833,chr12:56922803-56922833.0,GTGTTAAGTTACTTATTCTA,GTGTTAAGTTACTTATTCTA,NGG,48,2:0 | 3:48,0.29911,0.16097,1,NC_000012.12:56922804-56922826,+,
+rs41292019,chr12:64455920-64455950,chr12:64455920-64455950.0,GCTACTGCAAATGTCTTTCG,GCTACTGCAAATGTCTTTCG,NGG,12,2:0 | 3:12,0.541531,0.413703,1,NC_000012.12:64455925-64455947,+,"TANK binding kinase 1, transcript variant X3"
+rs73124200,chr12:64555452-64555482,chr12:64555452-64555482.0,ATAGAAAGCCTCTACCGGCC,ATAGAAAGCCTCTACCGGCC,NGG,12,2:0 | 3:12,0.613849,0.417137,1,NC_000012.12:64555452-64555474,+,
+rs73124200,chr12:64555452-64555482,chr12:64555452-64555482.1,AAGCCTCTACCGGCCGGGCA,AAGCCTCTACCGGCCGGGCA,NGG,90,2:5 | 3:85,0.566983,0.0518375,2,NC_000012.12:64555457-64555479,+,
+rs12589020,chr14:52845268-52845298,chr14:52845268-52845298.0,CCACGCTTCAGCTCTCTTGC,CCACGCTTCAGCTCTCTTGC,NGG,27,2:0 | 3:27,0.334898,0.162426,1,NC_000014.9:52845271-52845293,+,
+rs12589020,chr14:52845268-52845298,chr14:52845268-52845298.1,CAGCAAGAGAGCTGAAGCGT,ACGCTTCAGCTCTCTTGCTG,NGG,31,2:1 | 3:30,0.623894,0.188239,2,NC_000014.9:52845270-52845292,-,
+rs12589020,chr14:52845268-52845298,chr14:52845268-52845298.2,CCAGCAAGAGAGCTGAAGCG,CGCTTCAGCTCTCTTGCTGG,NGG,36,2:2 | 3:34,0.612947,0.175732,3,NC_000014.9:52845271-52845293,-,
+rs12589020,chr14:52845268-52845298,chr14:52845268-52845298.0,CCACGCTTCAGCTCTCTTGC,CCACGCTTCAGCTCTCTTGC,NGG,27,2:0 | 3:27,0.334898,0.162426,1,NC_000014.9:52845271-52845293,+,
+rs12589020,chr14:52845268-52845298,chr14:52845268-52845298.1,CAGCAAGAGAGCTGAAGCGT,ACGCTTCAGCTCTCTTGCTG,NGG,31,2:1 | 3:30,0.623894,0.188239,2,NC_000014.9:52845270-52845292,-,
+rs12589020,chr14:52845268-52845298,chr14:52845268-52845298.2,CCAGCAAGAGAGCTGAAGCG,CGCTTCAGCTCTCTTGCTGG,NGG,36,2:2 | 3:34,0.612947,0.175732,3,NC_000014.9:52845271-52845293,-,
+rs147767029,chr14:52951105-52951135,chr14:52951105-52951135.0,CCCCTCTGTCCGAGCCTGGC,CCCCTCTGTCCGAGCCTGGC,NGG,25,2:0 | 3:25,0.275128,0.241697,1,NC_000014.9:52951107-52951129,+,
+rs147767029,chr14:52951105-52951135,chr14:52951105-52951135.1,CCAGCCAGGCTCGGACAGAG,CTCTGTCCGAGCCTGGCTGG,NGG,36,2:0 | 3:36,0.635084,0.201945,2,NC_000014.9:52951107-52951129,-,
+rs147767029,chr14:52951105-52951135,chr14:52951105-52951135.2,TGTCCGAGCCTGGCTGGGCT,TGTCCGAGCCTGGCTGGGCT,NGG,51,2:0 | 3:51,0.356169,0.133692,3,NC_000014.9:52951113-52951135,+,
+rs147767029,chr14:52951105-52951135,chr14:52951105-52951135.3,CTGTCCGAGCCTGGCTGGGC,CTGTCCGAGCCTGGCTGGGC,NGG,56,2:2 | 3:54,0.213404,0.0788235,4,NC_000014.9:52951112-52951134,+,
+rs147767029,chr14:52951105-52951135,chr14:52951105-52951135.0,CCCCTCTGTCCGAGCCTGGC,CCCCTCTGTCCGAGCCTGGC,NGG,25,2:0 | 3:25,0.275128,0.241697,1,NC_000014.9:52951107-52951129,+,
+rs147767029,chr14:52951105-52951135,chr14:52951105-52951135.1,CCAGCCAGGCTCGGACAGAG,CTCTGTCCGAGCCTGGCTGG,NGG,36,2:0 | 3:36,0.635084,0.201945,2,NC_000014.9:52951107-52951129,-,
+rs147767029,chr14:52951105-52951135,chr14:52951105-52951135.2,TGTCCGAGCCTGGCTGGGCT,TGTCCGAGCCTGGCTGGGCT,NGG,51,2:0 | 3:51,0.356169,0.133692,3,NC_000014.9:52951113-52951135,+,
+rs147767029,chr14:52951105-52951135,chr14:52951105-52951135.3,CTGTCCGAGCCTGGCTGGGC,CTGTCCGAGCCTGGCTGGGC,NGG,56,2:2 | 3:54,0.213404,0.0788235,4,NC_000014.9:52951112-52951134,+,
+rs3098199,chr15:50529045-50529075,chr15:50529045-50529075.0,CTCCATGCTTTCTTTCCTTC,CTCCATGCTTTCTTTCCTTC,NGG,164,2:15 | 3:149,0.279124,0.0512295,1,NC_000015.10:50529046-50529068,+,
+rs117618017,chr15:63277687-63277717,chr15:63277687-63277717.0,ACGCAACGGCTCGGTGGCGA,TCGCCACCGAGCCGTTGCGT,NGG,1,2:0 | 3:1,0.491463,0.50564,1,NC_000015.10:63277694-63277716,-,"aph-1 homolog B, gamma-secretase subunit, transcript variant X1"
+rs8050588,chr16:30926462-30926492,chr16:30926462-30926492.0,AGTAGGGATCGGGGAAGCAT,AGTAGGGATCGGGGAAGCAT,NGG,22,2:3 | 3:19,0.524281,0.228575,1,NC_000016.10:30926468-30926490,+,
+rs8050588,chr16:30926462-30926492,chr16:30926462-30926492.1,CAGTAGGGATCGGGGAAGCA,CAGTAGGGATCGGGGAAGCA,NGG,34,2:1 | 3:33,0.475818,0.17063,2,NC_000016.10:30926467-30926489,+,
+rs1141534,chr19:1032674-1032704,chr19:1032674-1032704.0,TCGCCCTGGCGGGGAAGGTG,TCGCCCTGGCGGGGAAGGTG,NGG,35,2:4 | 3:31,0.505068,0.165802,1,NC_000019.10:1032680-1032702,+,"calponin 2, transcript variant 4"
+rs1141534,chr19:1032674-1032704,chr19:1032674-1032704.0,TCGCCCTGGCGGGGAAGGTG,TCGCCCTGGCGGGGAAGGTG,NGG,35,2:4 | 3:31,0.505068,0.165802,1,NC_000019.10:1032680-1032702,+,"calponin 2, transcript variant 4"
+rs3764645,chr19:1042794-1042824,chr19:1042794-1042824.0,GGCCGCTGAGGACCTGGCCC,GGCCGCTGAGGACCTGGCCC,NGG,65,2:1 | 3:64,0.479399,0.076691,1,NC_000019.10:1042802-1042824,+,"ATP binding cassette subfamily A member 7, transcript variant X11"
+rs80257887,chr19:44516782-44516812,chr19:44516782-44516812.0,TGTTGAATCCCAACCCCTAG,CTAGGGGTTGGGATTCAACA,NGG,13,2:0 | 3:13,0.63367,0.405722,1,NC_000019.10:44516786-44516808,-,
+rs75161053,chr19:44544847-44544877,chr19:44544847-44544877.0,GATCACCCTGGGTGTAATGC,GCATTACACCCAGGGTGATC,NGG,6,2:0 | 3:6,0.515971,0.650778,1,NC_000019.10:44544848-44544870,-,
+rs203709,chr19:44658282-44658312,chr19:44658282-44658312.0,GGGCTCCAACCTTGTAACCC,GGGCTCCAACCTTGTAACCC,NGG,22,2:0 | 3:22,0.638003,0.356184,1,NC_000019.10:44658287-44658309,+,
+rs203709,chr19:44658282-44658312,chr19:44658282-44658312.1,GGTTACAAGGTTGGAGCCCC,GGGGCTCCAACCTTGTAACC,NGG,28,2:0 | 3:28,0.364217,0.298059,2,NC_000019.10:44658283-44658305,-,
+rs203709,chr19:44658282-44658312,chr19:44658282-44658312.0,GGGCTCCAACCTTGTAACCC,GGGCTCCAACCTTGTAACCC,NGG,22,2:0 | 3:22,0.638003,0.356184,1,NC_000019.10:44658287-44658309,+,
+rs203709,chr19:44658282-44658312,chr19:44658282-44658312.1,GGTTACAAGGTTGGAGCCCC,GGGGCTCCAACCTTGTAACC,NGG,28,2:0 | 3:28,0.364217,0.298059,2,NC_000019.10:44658283-44658305,-,
+rs35385129,chr19:44658905-44658935,chr19:44658905-44658935.0,GTGCTCAATTACGGCAGCTC,GAGCTGCCGTAATTGAGCAC,NGG,12,2:0 | 3:12,0.451213,0.506361,1,NC_000019.10:44658911-44658933,-,
+rs35385129,chr19:44658905-44658935,chr19:44658905-44658935.0,GTGCTCAATTACGGCAGCTC,GAGCTGCCGTAATTGAGCAC,NGG,12,2:0 | 3:12,0.451213,0.506361,1,NC_000019.10:44658911-44658933,-,
+rs111780744,chr19:44663668-44663698,chr19:44663668-44663698.0,AAGCAAGACGCTAAATGAAG,AAGCAAGACGCTAAATGAAG,NGG,34,2:0 | 3:34,0.614684,0.133602,1,NC_000019.10:44663676-44663698,+,"PVR cell adhesion molecule, transcript variant 1"
+rs2289495,chr19:44684014-44684044,chr19:44684014-44684044.0,GGGAAGGGGTCCAGCAGCCG,CGGCTGCTGGACCCCTTCCC,NGG,56,2:0 | 3:56,0.564831,0.0727178,1,NC_000019.10:44684020-44684042,-,"CEA cell adhesion molecule 19, transcript variant 3"
+rs2289495,chr19:44684014-44684044,chr19:44684014-44684044.0,GGGAAGGGGTCCAGCAGCCG,CGGCTGCTGGACCCCTTCCC,NGG,56,2:0 | 3:56,0.564831,0.0727178,1,NC_000019.10:44684020-44684042,-,"CEA cell adhesion molecule 19, transcript variant 3"
+rs2965163,chr19:44697240-44697270,chr19:44697240-44697270.0,GCTCTGAGGCAGGCCCGGCA,GCTCTGAGGCAGGCCCGGCA,NGG,66,2:9 | 3:57,0.567964,0.108176,1,NC_000019.10:44697240-44697262,+,
+rs2965164,chr19:44698766-44698796,chr19:44698766-44698796.0,TCTTATGACCTGCATCCTGA,TCAGGATGCAGGTCATAAGA,NGG,39,2:3 | 3:36,0.536574,0.212502,1,NC_000019.10:44698766-44698788,-,
+rs2965164,chr19:44698766-44698796,chr19:44698766-44698796.0,TCTTATGACCTGCATCCTGA,TCAGGATGCAGGTCATAAGA,NGG,39,2:3 | 3:36,0.536574,0.212502,1,NC_000019.10:44698766-44698788,-,
+rs150820726,chr19:44723875-44723905,chr19:44723875-44723905.0,TTCACCCTGCATGTGGCAGC,GCTGCCACATGCAGGGTGAA,NGG,36,2:1 | 3:35,0.286124,0.185404,1,NC_000019.10:44723880-44723902,-,
+rs150820726,chr19:44723875-44723905,chr19:44723875-44723905.1,ACCCTGCATGTGGCAGCTGG,CCAGCTGCCACATGCAGGGT,NGG,39,2:5 | 3:34,0.5102,0.154711,2,NC_000019.10:44723877-44723899,-,
+rs150820726,chr19:44723875-44723905,chr19:44723875-44723905.2,TCACCCTGCATGTGGCAGCT,AGCTGCCACATGCAGGGTGA,NGG,40,2:1 | 3:39,0.419078,0.200219,3,NC_000019.10:44723879-44723901,-,
+rs150820726,chr19:44723875-44723905,chr19:44723875-44723905.3,GCTGCCACATGCAGGGTGAA,GCTGCCACATGCAGGGTGAA,NGG,50,2:4 | 3:46,0.474436,0.10863,4,NC_000019.10:44723883-44723905,+,
+rs150820726,chr19:44723875-44723905,chr19:44723875-44723905.4,CACCCTGCATGTGGCAGCTG,CAGCTGCCACATGCAGGGTG,NGG,53,2:2 | 3:51,0.407736,0.127428,5,NC_000019.10:44723878-44723900,-,
+rs150820726,chr19:44723875-44723905,chr19:44723875-44723905.5,CTCCCCCAGCTGCCACATGC,CTCCCCCAGCTGCCACATGC,NGG,59,2:2 | 3:57,0.449521,0.153312,6,NC_000019.10:44723875-44723897,+,
+rs150820726,chr19:44723875-44723905,chr19:44723875-44723905.6,TCCCCCAGCTGCCACATGCA,TCCCCCAGCTGCCACATGCA,NGG,61,2:5 | 3:56,0.542966,0.183254,7,NC_000019.10:44723876-44723898,+,
+rs12459810,chr19:44746388-44746418,chr19:44746388-44746418.0,GGGTGGAGGCGAGGTTTGGA,TCCAAACCTCGCCTCCACCC,NGG,75,2:4 | 3:71,0.541726,0.0794209,1,NC_000019.10:44746392-44746414,-,
+rs12459810,chr19:44746388-44746418,chr19:44746388-44746418.1,CTGAGGGTGGAGGCGAGGTT,AACCTCGCCTCCACCCTCAG,NGG,81,2:6 | 3:75,0.328527,0.142043,2,NC_000019.10:44746396-44746418,-,
+rs12459810,chr19:44746388-44746418,chr19:44746388-44746418.2,AGGGTGGAGGCGAGGTTTGG,CCAAACCTCGCCTCCACCCT,NGG,125,2:2 | 3:123,0.469364,0.0869157,3,NC_000019.10:44746393-44746415,-,
+rs2965169,chr19:44747883-44747913,chr19:44747883-44747913.0,TGTGTCTCTGCACTCGTTGG,CCAACGAGTGCAGAGACACA,NGG,13,2:1 | 3:12,0.608654,0.468392,1,NC_000019.10:44747890-44747912,-,"BCL3 transcription coactivator, transcript variant X2"
+rs2965169,chr19:44747883-44747913,chr19:44747883-44747913.1,TTGTGTCTCTGCACTCGTTG,CAACGAGTGCAGAGACACAA,NGG,14,2:0 | 3:14,0.560381,0.587901,2,NC_000019.10:44747891-44747913,-,"BCL3 transcription coactivator, transcript variant X2"
+rs10401176,chr19:44750218-44750248,chr19:44750218-44750248.0,AGTTTTCCCCGTCTGTGTGA,AGTTTTCCCCGTCTGTGTGA,NGG,26,2:0 | 3:26,0.417625,0.140488,1,NC_000019.10:44750225-44750247,+,
+rs10401176,chr19:44750218-44750248,chr19:44750218-44750248.1,GTTTTCCCCGTCTGTGTGAT,GTTTTCCCCGTCTGTGTGAT,NGG,29,2:2 | 3:27,0.487454,0.0978013,2,NC_000019.10:44750226-44750248,+,
+rs10401176,chr19:44750218-44750248,chr19:44750218-44750248.2,CACACAGACGGGGAAAACTG,CAGTTTTCCCCGTCTGTGTG,NGG,44,2:1 | 3:43,0.707197,0.0905963,3,NC_000019.10:44750221-44750243,-,
+rs10401176,chr19:44750218-44750248,chr19:44750218-44750248.0,AGTTTTCCCCGTCTGTGTGA,AGTTTTCCCCGTCTGTGTGA,NGG,26,2:0 | 3:26,0.417625,0.140488,1,NC_000019.10:44750225-44750247,+,
+rs10401176,chr19:44750218-44750248,chr19:44750218-44750248.1,GTTTTCCCCGTCTGTGTGAT,GTTTTCCCCGTCTGTGTGAT,NGG,29,2:2 | 3:27,0.487454,0.0978013,2,NC_000019.10:44750226-44750248,+,
+rs10401176,chr19:44750218-44750248,chr19:44750218-44750248.2,CACACAGACGGGGAAAACTG,CAGTTTTCCCCGTCTGTGTG,NGG,44,2:1 | 3:43,0.707197,0.0905963,3,NC_000019.10:44750221-44750243,-,
+rs62117205,chr19:44751993-44752023,chr19:44751993-44752023.0,TGTAAAACTATCACTGGACC,TGTAAAACTATCACTGGACC,NGG,27,2:3 | 3:24,0.581488,0.269655,1,NC_000019.10:44752001-44752023,+,
+rs62117205,chr19:44751993-44752023,chr19:44751993-44752023.1,TATACATGTAAAACTATCAC,TATACATGTAAAACTATCAC,NGG,65,2:3 | 3:62,0.480384,0.127407,2,NC_000019.10:44751995-44752017,+,
+rs62117205,chr19:44751993-44752023,chr19:44751993-44752023.0,TGTAAAACTATCACTGGACC,TGTAAAACTATCACTGGACC,NGG,27,2:3 | 3:24,0.581488,0.269655,1,NC_000019.10:44752001-44752023,+,
+rs62117205,chr19:44751993-44752023,chr19:44751993-44752023.1,TATACATGTAAAACTATCAC,TATACATGTAAAACTATCAC,NGG,65,2:3 | 3:62,0.480384,0.127407,2,NC_000019.10:44751995-44752017,+,
+rs140414737,chr19:44770799-44770829,chr19:44770799-44770829.0,AACTCCGTTCCCAAGGGAGG,AACTCCGTTCCCAAGGGAGG,NGG,18,2:0 | 3:18,0.553652,0.252979,1,NC_000019.10:44770804-44770826,+,
+rs140414737,chr19:44770799-44770829,chr19:44770799-44770829.1,AGAAACTCCGTTCCCAAGGG,AGAAACTCCGTTCCCAAGGG,NGG,38,2:0 | 3:38,0.613232,0.13982,2,NC_000019.10:44770801-44770823,+,
+rs1135062,chr19:44819471-44819501,chr19:44819471-44819501.0,GTCACTCACCGGTGCCGAAG,CTTCGGCACCGGTGAGTGAC,NGG,0,2:0 | 3:0,0.535063,0.980286,1,NC_000019.10:44819477-44819499,-,"basal cell adhesion molecule (Lutheran blood group), transcript variant 2"
+rs28399637,chr19:44820865-44820895,chr19:44820865-44820895.0,TGGAGCACGCCCGTGGGCAC,TGGAGCACGCCCGTGGGCAC,NGG,15,2:0 | 3:15,0.441348,0.455071,1,NC_000019.10:44820869-44820891,+,
+rs1466435,chr19:44839542-44839572,chr19:44839542-44839572.0,ACCAACTTCTCTTTACTTCC,GGAAGTAAAGAGAAGTTGGT,NGG,54,2:5 | 3:49,0.323236,0.0947512,1,NC_000019.10:44839544-44839566,-,
+rs1466435,chr19:44839542-44839572,chr19:44839542-44839572.1,TCCAGGAAGTAAAGAGAAGT,TCCAGGAAGTAAAGAGAAGT,NGG,111,2:14 | 3:97,0.495597,0.0805701,2,NC_000019.10:44839543-44839565,+,
+rs55840414,chr19:44840306-44840336,chr19:44840306-44840336.0,ATAAAACTGCGAACATAGCC,ATAAAACTGCGAACATAGCC,NGG,31,2:0 | 3:31,0.503524,0.236068,1,NC_000019.10:44840312-44840334,+,
+rs41289512,chr19:44848243-44848273,chr19:44848243-44848273.0,CCAAGCTAACAGTAGGCTCA,TGAGCCTACTGTTAGCTTGG,NGG,14,2:0 | 3:14,0.637052,0.301555,1,NC_000019.10:44848251-44848273,-,
+rs41289512,chr19:44848243-44848273,chr19:44848243-44848273.1,CTAACAGTAGGCTCAGGGTC,GACCCTGAGCCTACTGTTAG,NGG,15,2:0 | 3:15,0.543546,0.337077,2,NC_000019.10:44848246-44848268,-,
+rs41289512,chr19:44848243-44848273,chr19:44848243-44848273.2,CCCTGAGCCTACTGTTAGCT,CCCTGAGCCTACTGTTAGCT,NGG,26,2:1 | 3:25,0.425106,0.238931,3,NC_000019.10:44848251-44848273,+,
+rs41289512,chr19:44848243-44848273,chr19:44848243-44848273.3,ACAGTAGGCTCAGGGTCTGG,CCAGACCCTGAGCCTACTGT,NGG,42,2:5 | 3:37,0.4847,0.116756,4,NC_000019.10:44848243-44848265,-,
+rs7255063,chr19:44849146-44849176,chr19:44849146-44849176.0,GTCAGAGACACGTGTAGGAA,GTCAGAGACACGTGTAGGAA,NGG,18,2:0 | 3:18,0.523989,0.49982,1,NC_000019.10:44849149-44849171,+,
+rs365653,chr19:44858373-44858403,chr19:44858373-44858403.0,CCAACATGGGCGATAGAATG,CATTCTATCGCCCATGTTGG,NGG,118,2:1 | 3:117,0.573555,0.0785796,1,NC_000019.10:44858373-44858395,-,
+rs365653,chr19:44858373-44858403,chr19:44858373-44858403.1,CCTCATTCTATCGCCCATGT,CCTCATTCTATCGCCCATGT,NGG,299,2:11 | 3:288,0.558139,0.0215786,2,NC_000019.10:44858373-44858395,+,
+rs12978931,chr19:44860427-44860457,chr19:44860427-44860457.0,CTCACTGCAAACCGTCTCTG,CAGAGACGGTTTGCAGTGAG,NGG,31,2:0 | 3:31,0.644271,0.299969,1,NC_000019.10:44860435-44860457,-,
+rs12978931,chr19:44860427-44860457,chr19:44860427-44860457.0,CTCACTGCAAACCGTCTCTG,CAGAGACGGTTTGCAGTGAG,NGG,31,2:0 | 3:31,0.644271,0.299969,1,NC_000019.10:44860435-44860457,-,
+rs41290100,chr19:44867668-44867698,chr19:44867668-44867698.0,ATGGGAGCTGGGCGCGTTCC,ATGGGAGCTGGGCGCGTTCC,NGG,10,2:0 | 3:10,0.317384,0.38124,1,NC_000019.10:44867670-44867692,+,
+rs41290100,chr19:44867668-44867698,chr19:44867668-44867698.1,AGCTGGGCGCGTTCCAGGAA,AGCTGGGCGCGTTCCAGGAA,NGG,31,2:0 | 3:31,0.456304,0.222805,2,NC_000019.10:44867675-44867697,+,
+rs41290102,chr19:44867915-44867945,chr19:44867915-44867945.0,TAGAAGGGAGCTGGGACGAG,TAGAAGGGAGCTGGGACGAG,NGG,51,2:0 | 3:51,0.44217,0.209815,1,NC_000019.10:44867915-44867937,+,
+rs41290102,chr19:44867915-44867945,chr19:44867915-44867945.1,AGAAGGGAGCTGGGACGAGA,AGAAGGGAGCTGGGACGAGA,NGG,101,2:6 | 3:95,0.475561,0.0581701,2,NC_000019.10:44867916-44867938,+,
+rs41290102,chr19:44867915-44867945,chr19:44867915-44867945.2,GAAGGGAGCTGGGACGAGAG,GAAGGGAGCTGGGACGAGAG,NGG,118,2:6 | 3:112,0.573264,0.10264,3,NC_000019.10:44867917-44867939,+,
+rs71352236,chr19:44872140-44872170,chr19:44872140-44872170.0,CTGTACGCTGTGAGTGTATC,CTGTACGCTGTGAGTGTATC,NGG,0,2:0 | 3:0,0.304099,1.0,1,NC_000019.10:44872141-44872163,+,
+rs71352236,chr19:44872140-44872170,chr19:44872140-44872170.1,TGTACGCTGTGAGTGTATCG,TGTACGCTGTGAGTGTATCG,NGG,2,2:0 | 3:2,0.596905,0.843431,2,NC_000019.10:44872142-44872164,+,
+rs71352236,chr19:44872140-44872170,chr19:44872140-44872170.2,GTACGCTGTGAGTGTATCGG,GTACGCTGTGAGTGTATCGG,NGG,2,2:0 | 3:2,0.679598,0.812772,3,NC_000019.10:44872143-44872165,+,
+rs71352236,chr19:44872140-44872170,chr19:44872140-44872170.3,TCTGTACGCTGTGAGTGTAT,TCTGTACGCTGTGAGTGTAT,NGG,8,2:0 | 3:8,0.430075,0.374311,4,NC_000019.10:44872140-44872162,+,
+rs71352236,chr19:44872140-44872170,chr19:44872140-44872170.0,CTGTACGCTGTGAGTGTATC,CTGTACGCTGTGAGTGTATC,NGG,0,2:0 | 3:0,0.304099,1.0,1,NC_000019.10:44872141-44872163,+,
+rs71352236,chr19:44872140-44872170,chr19:44872140-44872170.1,TGTACGCTGTGAGTGTATCG,TGTACGCTGTGAGTGTATCG,NGG,2,2:0 | 3:2,0.596905,0.843431,2,NC_000019.10:44872142-44872164,+,
+rs71352236,chr19:44872140-44872170,chr19:44872140-44872170.2,GTACGCTGTGAGTGTATCGG,GTACGCTGTGAGTGTATCGG,NGG,2,2:0 | 3:2,0.679598,0.812772,3,NC_000019.10:44872143-44872165,+,
+rs71352236,chr19:44872140-44872170,chr19:44872140-44872170.3,TCTGTACGCTGTGAGTGTAT,TCTGTACGCTGTGAGTGTAT,NGG,8,2:0 | 3:8,0.430075,0.374311,4,NC_000019.10:44872140-44872162,+,
+rs34278513,chr19:44874871-44874901,chr19:44874871-44874901.0,TCCTCTTTGGCTCCGTGCCT,AGGCACGGAGCCAAAGAGGA,NGG,13,2:2 | 3:11,0.281656,0.308599,1,NC_000019.10:44874879-44874901,-,
+rs34278513,chr19:44874871-44874901,chr19:44874871-44874901.1,CTCTTTGGCTCCGTGCCTTG,CAAGGCACGGAGCCAAAGAG,NGG,17,2:0 | 3:17,0.504325,0.25066,2,NC_000019.10:44874877-44874899,-,
+rs34278513,chr19:44874871-44874901,chr19:44874871-44874901.2,TTGGCTCCGTGCCTTGGGGC,GCCCCAAGGCACGGAGCCAA,NGG,26,2:0 | 3:26,0.39674,0.256884,3,NC_000019.10:44874873-44874895,-,
+rs34278513,chr19:44874871-44874901,chr19:44874871-44874901.3,CCCAAGGCACGGAGCCAAAG,CCCAAGGCACGGAGCCAAAG,NGG,28,2:0 | 3:28,0.527442,0.185455,4,NC_000019.10:44874878-44874900,+,
+rs34278513,chr19:44874871-44874901,chr19:44874871-44874901.4,CCTCTTTGGCTCCGTGCCTT,AAGGCACGGAGCCAAAGAGG,NGG,38,2:0 | 3:38,0.255401,0.224494,5,NC_000019.10:44874878-44874900,-,
+rs387976,chr19:44875787-44875817,chr19:44875787-44875817.0,GGGAAAACAGACACCTCTTC,GGGAAAACAGACACCTCTTC,NGG,73,2:3 | 3:70,0.401742,0.144003,1,NC_000019.10:44875791-44875813,+,
+rs387976,chr19:44875787-44875817,chr19:44875787-44875817.1,AAGAGGTGTCTGTTTTCCCT,AGGGAAAACAGACACCTCTT,NGG,74,2:5 | 3:69,0.429642,0.0923168,2,NC_000019.10:44875787-44875809,-,
+rs387976,chr19:44875787-44875817,chr19:44875787-44875817.0,GGGAAAACAGACACCTCTTC,GGGAAAACAGACACCTCTTC,NGG,73,2:3 | 3:70,0.401742,0.144003,1,NC_000019.10:44875791-44875813,+,
+rs387976,chr19:44875787-44875817,chr19:44875787-44875817.1,AAGAGGTGTCTGTTTTCCCT,AGGGAAAACAGACACCTCTT,NGG,74,2:5 | 3:69,0.429642,0.0923168,2,NC_000019.10:44875787-44875809,-,
+rs387976,chr19:44875787-44875817,chr19:44875787-44875817.0,GGGAAAACAGACACCTCTTC,GGGAAAACAGACACCTCTTC,NGG,73,2:3 | 3:70,0.401742,0.144003,1,NC_000019.10:44875791-44875813,+,
+rs387976,chr19:44875787-44875817,chr19:44875787-44875817.1,AAGAGGTGTCTGTTTTCCCT,AGGGAAAACAGACACCTCTT,NGG,74,2:5 | 3:69,0.429642,0.0923168,2,NC_000019.10:44875787-44875809,-,
+rs41290120,chr19:44879402-44879432,chr19:44879402-44879432.0,GTTGCTGGGGGTCTCGGGAG,GTTGCTGGGGGTCTCGGGAG,NGG,32,2:0 | 3:32,0.341265,0.265947,1,NC_000019.10:44879403-44879425,+,
+rs41290120,chr19:44879402-44879432,chr19:44879402-44879432.1,GGTTGCTGGGGGTCTCGGGA,GGTTGCTGGGGGTCTCGGGA,NGG,48,2:0 | 3:48,0.468292,0.136766,2,NC_000019.10:44879402-44879424,+,
+rs41290120,chr19:44879402-44879432,chr19:44879402-44879432.2,GCTGGGGGTCTCGGGAGGGG,GCTGGGGGTCTCGGGAGGGG,NGG,175,2:8 | 3:167,0.347365,0.0425738,3,NC_000019.10:44879406-44879428,+,
+rs41290120,chr19:44879402-44879432,chr19:44879402-44879432.3,CTGGGGGTCTCGGGAGGGGA,CTGGGGGTCTCGGGAGGGGA,NGG,198,2:12 | 3:186,0.438563,0.0371564,4,NC_000019.10:44879407-44879429,+,
+rs41290120,chr19:44879402-44879432,chr19:44879402-44879432.0,GTTGCTGGGGGTCTCGGGAG,GTTGCTGGGGGTCTCGGGAG,NGG,32,2:0 | 3:32,0.341265,0.265947,1,NC_000019.10:44879403-44879425,+,
+rs41290120,chr19:44879402-44879432,chr19:44879402-44879432.1,GGTTGCTGGGGGTCTCGGGA,GGTTGCTGGGGGTCTCGGGA,NGG,48,2:0 | 3:48,0.468292,0.136766,2,NC_000019.10:44879402-44879424,+,
+rs41290120,chr19:44879402-44879432,chr19:44879402-44879432.2,GCTGGGGGTCTCGGGAGGGG,GCTGGGGGTCTCGGGAGGGG,NGG,175,2:8 | 3:167,0.347365,0.0425738,3,NC_000019.10:44879406-44879428,+,
+rs41290120,chr19:44879402-44879432,chr19:44879402-44879432.3,CTGGGGGTCTCGGGAGGGGA,CTGGGGGTCTCGGGAGGGGA,NGG,198,2:12 | 3:186,0.438563,0.0371564,4,NC_000019.10:44879407-44879429,+,
+rs11673139,chr19:44879764-44879794,chr19:44879764-44879794.0,GGCTGTCGTGGGACCCAGTA,GGCTGTCGTGGGACCCAGTA,NGG,39,2:3 | 3:36,0.484192,0.20077,1,NC_000019.10:44879768-44879790,+,
+rs144261139,chr19:44882083-44882113,chr19:44882083-44882113.0,ATGTCCCCTGCCCATGGGAG,ATGTCCCCTGCCCATGGGAG,NGG,49,2:2 | 3:47,0.519807,0.108391,1,NC_000019.10:44882087-44882109,+,
+rs144261139,chr19:44882083-44882113,chr19:44882083-44882113.1,ATGTCCTCTCCCATGGGCAG,CTGCCCATGGGAGAGGACAT,NGG,49,2:3 | 3:46,0.502604,0.11867,2,NC_000019.10:44882091-44882113,-,
+rs144261139,chr19:44882083-44882113,chr19:44882083-44882113.0,ATGTCCCCTGCCCATGGGAG,ATGTCCCCTGCCCATGGGAG,NGG,49,2:2 | 3:47,0.519807,0.108391,1,NC_000019.10:44882087-44882109,+,
+rs144261139,chr19:44882083-44882113,chr19:44882083-44882113.1,ATGTCCTCTCCCATGGGCAG,CTGCCCATGGGAGAGGACAT,NGG,49,2:3 | 3:46,0.502604,0.11867,2,NC_000019.10:44882091-44882113,-,
+rs76692773,chr19:44890938-44890968,chr19:44890938-44890968.0,GGGCGATGCCTCAGCGGGCG,GGGCGATGCCTCAGCGGGCG,NGG,9,2:0 | 3:9,0.364181,0.692746,1,NC_000019.10:44890945-44890967,+,
+rs76692773,chr19:44890938-44890968,chr19:44890938-44890968.1,GAGGCGGGGCGATGCCTCAG,GAGGCGGGGCGATGCCTCAG,NGG,20,2:1 | 3:19,0.64435,0.301062,2,NC_000019.10:44890939-44890961,+,
+rs76692773,chr19:44890938-44890968,chr19:44890938-44890968.2,AGGCGGGGCGATGCCTCAGC,AGGCGGGGCGATGCCTCAGC,NGG,23,2:0 | 3:23,0.509674,0.222511,3,NC_000019.10:44890940-44890962,+,
+rs59007384,chr19:44893392-44893422,chr19:44893392-44893422.0,TCAGTCCCCCCAACCCTGTC,GACAGGGTTGGGGGGACTGA,NGG,38,2:1 | 3:37,0.246353,0.150015,1,NC_000019.10:44893399-44893421,-,
+rs59007384,chr19:44893392-44893422,chr19:44893392-44893422.1,CAGTCCCCCCAACCCTGTCT,AGACAGGGTTGGGGGGACTG,NGG,39,2:1 | 3:38,0.421315,0.183028,2,NC_000019.10:44893398-44893420,-,
+rs59007384,chr19:44893392-44893422,chr19:44893392-44893422.2,TGGAGGCCCAGACAGGGTTG,TGGAGGCCCAGACAGGGTTG,NGG,87,2:6 | 3:81,0.423803,0.0651253,3,NC_000019.10:44893392-44893414,+,
+rs59007384,chr19:44893392-44893422,chr19:44893392-44893422.0,TCAGTCCCCCCAACCCTGTC,GACAGGGTTGGGGGGACTGA,NGG,38,2:1 | 3:37,0.246353,0.150015,1,NC_000019.10:44893399-44893421,-,
+rs59007384,chr19:44893392-44893422,chr19:44893392-44893422.1,CAGTCCCCCCAACCCTGTCT,AGACAGGGTTGGGGGGACTG,NGG,39,2:1 | 3:38,0.421315,0.183028,2,NC_000019.10:44893398-44893420,-,
+rs59007384,chr19:44893392-44893422,chr19:44893392-44893422.2,TGGAGGCCCAGACAGGGTTG,TGGAGGCCCAGACAGGGTTG,NGG,87,2:6 | 3:81,0.423803,0.0651253,3,NC_000019.10:44893392-44893414,+,
+rs35568738,chr19:44899445-44899475,chr19:44899445-44899475.0,ACGTCCACCCCCTTAGTACC,ACGTCCACCCCCTTAGTACC,NGG,11,2:0 | 3:11,0.39942,0.736382,1,NC_000019.10:44899446-44899468,+,
+rs35568738,chr19:44899445-44899475,chr19:44899445-44899475.1,CGTCCACCCCCTTAGTACCT,CGTCCACCCCCTTAGTACCT,NGG,21,2:0 | 3:21,0.556629,0.298302,2,NC_000019.10:44899447-44899469,+,
+rs35568738,chr19:44899445-44899475,chr19:44899445-44899475.2,AGTCCCAGGTACTAAGGGGG,CCCCCTTAGTACCTGGGACT,NGG,1329,2:54 | 3:1275,0.615408,0.0116601,3,NC_000019.10:44899450-44899472,-,
+rs35568738,chr19:44899445-44899475,chr19:44899445-44899475.0,ACGTCCACCCCCTTAGTACC,ACGTCCACCCCCTTAGTACC,NGG,11,2:0 | 3:11,0.39942,0.736382,1,NC_000019.10:44899446-44899468,+,
+rs35568738,chr19:44899445-44899475,chr19:44899445-44899475.1,CGTCCACCCCCTTAGTACCT,CGTCCACCCCCTTAGTACCT,NGG,21,2:0 | 3:21,0.556629,0.298302,2,NC_000019.10:44899447-44899469,+,
+rs35568738,chr19:44899445-44899475,chr19:44899445-44899475.2,AGTCCCAGGTACTAAGGGGG,CCCCCTTAGTACCTGGGACT,NGG,1329,2:54 | 3:1275,0.615408,0.0116601,3,NC_000019.10:44899450-44899472,-,
+rs117264457,chr19:44901159-44901189,chr19:44901159-44901189.0,AATTAGCAAGTGGCCCCACC,GGTGGGGCCACTTGCTAATT,NGG,13,2:0 | 3:13,0.515832,0.450512,1,NC_000019.10:44901159-44901181,-,
+rs1038026,chr19:44901789-44901819,chr19:44901789-44901819.0,GTAGGTAGAGCAGCCAGGCG,GTAGGTAGAGCAGCCAGGCG,NGG,18,2:0 | 3:18,0.584331,0.233128,1,NC_000019.10:44901794-44901816,+,
+rs1038026,chr19:44901789-44901819,chr19:44901789-44901819.1,AAAAAGTAGGTAGAGCAGCC,AAAAAGTAGGTAGAGCAGCC,NGG,48,2:4 | 3:44,0.529511,0.0933511,2,NC_000019.10:44901789-44901811,+,
+rs1038026,chr19:44901789-44901819,chr19:44901789-44901819.0,GTAGGTAGAGCAGCCAGGCG,GTAGGTAGAGCAGCCAGGCG,NGG,18,2:0 | 3:18,0.584331,0.233128,1,NC_000019.10:44901794-44901816,+,
+rs1038026,chr19:44901789-44901819,chr19:44901789-44901819.1,AAAAAGTAGGTAGAGCAGCC,AAAAAGTAGGTAGAGCAGCC,NGG,48,2:4 | 3:44,0.529511,0.0933511,2,NC_000019.10:44901789-44901811,+,
+rs7412,chr19:44908806-44908836,chr19:44908806-44908836.0,CGATGACCTGCAGAAGCGCC,CGATGACCTGCAGAAGCGCC,NGG,8,2:0 | 3:8,0.46055,0.388152,1,NC_000019.10:44908806-44908828,+,"apolipoprotein E, transcript variant 1"
+rs7412,chr19:44908806-44908836,chr19:44908806-44908836.1,ACACTGCCAGGCGCTTCTGC,GCAGAAGCGCCTGGCAGTGT,NGG,21,2:0 | 3:21,0.478205,0.211465,2,NC_000019.10:44908812-44908834,-,"apolipoprotein E, transcript variant 1"
+rs429358,chr19:44908668-44908698,chr19:44908668-44908698.0,GGAGGACGTGTGCGGCCGCC,GGAGGACGTGTGCGGCCGCC,NGG,19,2:0 | 3:19,0.415328,0.404294,1,NC_000019.10:44908674-44908696,+,"apolipoprotein E, transcript variant 1"
+rs72654437,chr19:44912826-44912856,chr19:44912826-44912856.0,TATGCTATTCTTGTGGGGTC,TATGCTATTCTTGTGGGGTC,NGG,20,2:1 | 3:19,0.320912,0.394312,1,NC_000019.10:44912827-44912849,+,
+rs72654437,chr19:44912826-44912856,chr19:44912826-44912856.1,ATGCTATTCTTGTGGGGTCT,ATGCTATTCTTGTGGGGTCT,NGG,21,2:0 | 3:21,0.388747,0.209107,2,NC_000019.10:44912828-44912850,+,
+rs12691088,chr19:44915213-44915243,chr19:44915213-44915243.0,TAAGCTGGGTGGGGGGCTCT,TAAGCTGGGTGGGGGGCTCT,NGG,45,2:3 | 3:42,0.341943,0.103398,1,NC_000019.10:44915219-44915241,+,
+rs12691088,chr19:44915213-44915243,chr19:44915213-44915243.1,GTAAGCTGGGTGGGGGGCTC,GTAAGCTGGGTGGGGGGCTC,NGG,50,2:4 | 3:46,0.123898,0.0916766,2,NC_000019.10:44915218-44915240,+,
+rs12691088,chr19:44915213-44915243,chr19:44915213-44915243.0,TAAGCTGGGTGGGGGGCTCT,TAAGCTGGGTGGGGGGCTCT,NGG,45,2:3 | 3:42,0.341943,0.103398,1,NC_000019.10:44915219-44915241,+,
+rs12691088,chr19:44915213-44915243,chr19:44915213-44915243.1,GTAAGCTGGGTGGGGGGCTC,GTAAGCTGGGTGGGGGGCTC,NGG,50,2:4 | 3:46,0.123898,0.0916766,2,NC_000019.10:44915218-44915240,+,
+rs1064725,chr19:44919288-44919318,chr19:44919288-44919318.0,TGCTGAGGACTCCCTCCATG,TGCTGAGGACTCCCTCCATG,NGG,49,2:2 | 3:47,0.617726,0.157479,1,NC_000019.10:44919290-44919312,+,"apolipoprotein C1, transcript variant 3"
+rs117664574,chr19:44924506-44924536,chr19:44924506-44924536.0,CCAAGGGGTCGAGTGGATGT,ACATCCACTCGACCCCTTGG,NGG,9,2:0 | 3:9,0.569147,0.44146,1,NC_000019.10:44924510-44924532,-,
+rs117664574,chr19:44924506-44924536,chr19:44924506-44924536.1,CCAACATCCACTCGACCCCT,CCAACATCCACTCGACCCCT,NGG,10,2:0 | 3:10,0.514857,0.69704,2,NC_000019.10:44924510-44924532,+,
+rs117664574,chr19:44924506-44924536,chr19:44924506-44924536.2,AGGGGTCGAGTGGATGTTGG,CCAACATCCACTCGACCCCT,NGG,24,2:0 | 3:24,0.547222,0.213829,3,NC_000019.10:44924507-44924529,-,
+rs117664574,chr19:44924506-44924536,chr19:44924506-44924536.0,CCAAGGGGTCGAGTGGATGT,ACATCCACTCGACCCCTTGG,NGG,9,2:0 | 3:9,0.569147,0.44146,1,NC_000019.10:44924510-44924532,-,
+rs117664574,chr19:44924506-44924536,chr19:44924506-44924536.1,CCAACATCCACTCGACCCCT,CCAACATCCACTCGACCCCT,NGG,10,2:0 | 3:10,0.514857,0.69704,2,NC_000019.10:44924510-44924532,+,
+rs117664574,chr19:44924506-44924536,chr19:44924506-44924536.2,AGGGGTCGAGTGGATGTTGG,CCAACATCCACTCGACCCCT,NGG,24,2:0 | 3:24,0.547222,0.213829,3,NC_000019.10:44924507-44924529,-,
+rs12983572,chr19:44953559-44953589,chr19:44953559-44953589.0,TGAGTGACTTACCTCTCTGA,TCAGAGAGGTAAGTCACTCA,NGG,16,2:0 | 3:16,0.628362,0.343641,1,NC_000019.10:44953560-44953582,-,
+rs12983572,chr19:44953559-44953589,chr19:44953559-44953589.1,GTGAGTGACTTACCTCTCTG,CAGAGAGGTAAGTCACTCAC,NGG,40,2:0 | 3:40,0.619924,0.20166,2,NC_000019.10:44953561-44953583,-,
+rs12983572,chr19:44953559-44953589,chr19:44953559-44953589.0,TGAGTGACTTACCTCTCTGA,TCAGAGAGGTAAGTCACTCA,NGG,16,2:0 | 3:16,0.628362,0.343641,1,NC_000019.10:44953560-44953582,-,
+rs12983572,chr19:44953559-44953589,chr19:44953559-44953589.1,GTGAGTGACTTACCTCTCTG,CAGAGAGGTAAGTCACTCAC,NGG,40,2:0 | 3:40,0.619924,0.20166,2,NC_000019.10:44953561-44953583,-,
+rs8102895,chr19:44955190-44955220,chr19:44955190-44955220.0,GGCTGGGAGAAAGACGAGTA,GGCTGGGAGAAAGACGAGTA,NGG,36,2:5 | 3:31,0.631667,0.276153,1,NC_000019.10:44955196-44955218,+,
+rs75178253,chr19:44957734-44957764,chr19:44957734-44957764.0,TAAAGCAGCAGACTGTGCAG,CTGCACAGTCTGCTGCTTTA,NGG,58,2:3 | 3:55,0.599585,0.115607,1,NC_000019.10:44957741-44957763,-,
+rs75178253,chr19:44957734-44957764,chr19:44957734-44957764.1,AAAGCAGCAGACTGTGCAGA,TCTGCACAGTCTGCTGCTTT,NGG,69,2:4 | 3:65,0.5808,0.0835503,2,NC_000019.10:44957740-44957762,-,
+rs73558179,chr19:44973231-44973261,chr19:44973231-44973261.0,ACTTGGGAGGTGATGGGGTG,ACTTGGGAGGTGATGGGGTG,NGG,140,2:9 | 3:131,0.375274,0.0518958,1,NC_000019.10:44973234-44973256,+,
+rs73558179,chr19:44973231-44973261,chr19:44973231-44973261.1,GGGAGGTGATGGGGTGTGGA,GGGAGGTGATGGGGTGTGGA,NGG,338,2:18 | 3:320,0.348124,0.0250307,2,NC_000019.10:44973238-44973260,+,
+rs146390218,chr19:44975079-44975109,chr19:44975079-44975109.0,CTCTCATGCGATGTGGCCTT,AAGGCCACATCGCATGAGAG,NGG,16,2:0 | 3:16,0.408604,0.255234,1,NC_000019.10:44975079-44975101,-,
+rs146390218,chr19:44975079-44975109,chr19:44975079-44975109.1,TCTGAATCTCTCATGCGATG,CATCGCATGAGAGATTCAGA,NGG,19,2:0 | 3:19,0.657333,0.267407,2,NC_000019.10:44975086-44975108,-,
+rs146390218,chr19:44975079-44975109,chr19:44975079-44975109.2,TCTCTCATGCGATGTGGCCT,AGGCCACATCGCATGAGAGA,NGG,21,2:0 | 3:21,0.331851,0.291061,3,NC_000019.10:44975080-44975102,-,
+rs117612135,chr19:45001253-45001283,chr19:45001253-45001283.0,GCGCTCAGGAGGGGTTGGGC,GCCCAACCCCTCCTGAGCGC,NGG,42,2:2 | 3:40,0.447396,0.15924,1,NC_000019.10:45001260-45001282,-,
+rs117612135,chr19:45001253-45001283,chr19:45001253-45001283.0,GCGCTCAGGAGGGGTTGGGC,GCCCAACCCCTCCTGAGCGC,NGG,42,2:2 | 3:40,0.447396,0.15924,1,NC_000019.10:45001260-45001282,-,
+rs35912475,chr19:45019458-45019488,chr19:45019458-45019488.0,TAATGAGATTGTAGCTACAG,CTGTAGCTACAATCTCATTA,NGG,40,2:0 | 3:40,0.633877,0.145985,1,NC_000019.10:45019462-45019484,-,
+rs186313460,chr19:45029417-45029447,chr19:45029417-45029447.0,AAAAAGACAGCTGGTCACCG,AAAAAGACAGCTGGTCACCG,NGG,129,2:12 | 3:117,0.701495,0.162461,1,NC_000019.10:45029423-45029445,+,
+rs112481437,chr19:45045861-45045891,chr19:45045861-45045891.0,CTCTGCACCATCCCTCCACC,GGTGGAGGGATGGTGCAGAG,NGG,62,2:4 | 3:58,0.423437,0.135138,1,NC_000019.10:45045866-45045888,-,
+rs112481437,chr19:45045861-45045891,chr19:45045861-45045891.1,CAGGTGGAGGGATGGTGCAG,CAGGTGGAGGGATGGTGCAG,NGG,115,2:4 | 3:111,0.615373,0.0469067,2,NC_000019.10:45045867-45045889,+,
+rs112481437,chr19:45045861-45045891,chr19:45045861-45045891.0,CTCTGCACCATCCCTCCACC,GGTGGAGGGATGGTGCAGAG,NGG,62,2:4 | 3:58,0.423437,0.135138,1,NC_000019.10:45045866-45045888,-,
+rs112481437,chr19:45045861-45045891,chr19:45045861-45045891.1,CAGGTGGAGGGATGGTGCAG,CAGGTGGAGGGATGGTGCAG,NGG,115,2:4 | 3:111,0.615373,0.0469067,2,NC_000019.10:45045867-45045889,+,
+rs12461065,chr19:45102034-45102064,chr19:45102034-45102064.0,AGCGTGTCCTTGGCCTGCTT,AGCGTGTCCTTGGCCTGCTT,NGG,15,2:3 | 3:12,0.39335,0.237408,1,NC_000019.10:45102036-45102058,+,
+rs12461065,chr19:45102034-45102064,chr19:45102034-45102064.1,CAAGCAGGCCAAGGACACGC,GCGTGTCCTTGGCCTGCTTG,NGG,30,2:1 | 3:29,0.602648,0.198836,2,NC_000019.10:45102034-45102056,-,
+rs12461065,chr19:45102034-45102064,chr19:45102034-45102064.2,CAGCGTGTCCTTGGCCTGCT,CAGCGTGTCCTTGGCCTGCT,NGG,32,2:1 | 3:31,0.269876,0.111736,3,NC_000019.10:45102035-45102057,+,
+rs145903417,chr19:45125830-45125860,chr19:45125830-45125860.0,GGAAGAGAAGTGGGCCATTC,GGAAGAGAAGTGGGCCATTC,NGG,34,2:1 | 3:33,0.29986,0.234551,1,NC_000019.10:45125830-45125852,+,
+rs145903417,chr19:45125830-45125860,chr19:45125830-45125860.0,GGAAGAGAAGTGGGCCATTC,GGAAGAGAAGTGGGCCATTC,NGG,34,2:1 | 3:33,0.29986,0.234551,1,NC_000019.10:45125830-45125852,+,
+rs79018068,chr19:45131580-45131610,chr19:45131580-45131610.0,ATTGTGCATGGAAAGTACTT,ATTGTGCATGGAAAGTACTT,NGG,48,2:1 | 3:47,0.544778,0.139185,1,NC_000019.10:45131583-45131605,+,
+rs75463276,chr19:45135558-45135588,chr19:45135558-45135588.0,GCTCCAGAGCTCCTGAGCCA,GCTCCAGAGCTCCTGAGCCA,NGG,74,2:0 | 3:74,0.470995,0.146014,1,NC_000019.10:45135563-45135585,+,
+rs75463276,chr19:45135558-45135588,chr19:45135558-45135588.1,AGCCCCTGGCTCAGGAGCTC,GAGCTCCTGAGCCAGGGGCT,NGG,84,2:5 | 3:79,0.32921,0.0962829,2,NC_000019.10:45135566-45135588,-,
+rs75463276,chr19:45135558-45135588,chr19:45135558-45135588.2,CTCCAGAGCTCCTGAGCCAG,CTCCAGAGCTCCTGAGCCAG,NGG,151,2:11 | 3:140,0.506965,0.0562859,3,NC_000019.10:45135564-45135586,+,
+rs146723120,chr19:45144946-45144976,chr19:45144946-45144976.0,CAGCGTGCTGCGCCTCGGGC,CAGCGTGCTGCGCCTCGGGC,NGG,8,2:0 | 3:8,0.333768,0.545082,1,NC_000019.10:45144949-45144971,+,"protein phosphatase 1 regulatory subunit 37, transcript variant X2"
+rs146723120,chr19:45144946-45144976,chr19:45144946-45144976.1,GCCCGAGGCGCAGCACGCTG,CAGCGTGCTGCGCCTCGGGC,NGG,15,2:0 | 3:15,0.535146,0.42583,2,NC_000019.10:45144946-45144968,-,"protein phosphatase 1 regulatory subunit 37, transcript variant X2"
+rs78073763,chr19:45146564-45146594,chr19:45146564-45146594.0,CCGACCGGAAAAAGGGAACT,AGTTCCCTTTTTCCGGTCGG,NGG,4,2:0 | 3:4,0.447777,0.483391,1,NC_000019.10:45146566-45146588,-,"protein phosphatase 1 regulatory subunit 37, transcript variant X2"
+rs78073763,chr19:45146564-45146594,chr19:45146564-45146594.1,CGACCGGAAAAAGGGAACTT,AAGTTCCCTTTTTCCGGTCG,NGG,5,2:0 | 3:5,0.515998,0.466166,2,NC_000019.10:45146565-45146587,-,"protein phosphatase 1 regulatory subunit 37, transcript variant X2"
+rs78073763,chr19:45146564-45146594,chr19:45146564-45146594.2,CCAAGTTCCCTTTTTCCGGT,CCAAGTTCCCTTTTTCCGGT,NGG,13,2:0 | 3:13,0.496109,0.386389,3,NC_000019.10:45146566-45146588,+,"protein phosphatase 1 regulatory subunit 37, transcript variant X2"
+rs78073763,chr19:45146564-45146594,chr19:45146564-45146594.3,GACCGGAAAAAGGGAACTTG,CAAGTTCCCTTTTTCCGGTC,NGG,16,2:2 | 3:14,0.667039,0.374103,4,NC_000019.10:45146564-45146586,-,
+rs1005451,chr19:45148805-45148835,chr19:45148805-45148835.0,CTGGGCCTTTCTTACTGTTG,CTGGGCCTTTCTTACTGTTG,NGG,26,2:3 | 3:23,0.45174,0.236606,1,NC_000019.10:45148810-45148832,+,
+rs1005451,chr19:45148805-45148835,chr19:45148805-45148835.1,AACTGGGCCTTTCTTACTGT,AACTGGGCCTTTCTTACTGT,NGG,34,2:0 | 3:34,0.352378,0.287489,2,NC_000019.10:45148808-45148830,+,
+rs1005451,chr19:45148805-45148835,chr19:45148805-45148835.2,ACTGGGCCTTTCTTACTGTT,ACTGGGCCTTTCTTACTGTT,NGG,34,2:0 | 3:34,0.345143,0.16501,3,NC_000019.10:45148809-45148831,+,
+rs1005451,chr19:45148805-45148835,chr19:45148805-45148835.3,TGGGCCTTTCTTACTGTTGG,TGGGCCTTTCTTACTGTTGG,NGG,35,2:0 | 3:35,0.526504,0.163349,4,NC_000019.10:45148811-45148833,+,
+rs149553138,chr19:45169204-45169234,chr19:45169204-45169234.0,GGTAAGTGCTGGGGCGGATC,GATCCGCCCCAGCACTTACC,NGG,13,2:0 | 3:13,0.344582,0.3915,1,NC_000019.10:45169212-45169234,-,
+rs149553138,chr19:45169204-45169234,chr19:45169204-45169234.1,GCTGGGGCGGATCTGGACCC,GGGTCCAGATCCGCCCCAGC,NGG,30,2:1 | 3:29,0.462823,0.195595,2,NC_000019.10:45169205-45169227,-,
+rs62118471,chr19:45187775-45187805,chr19:45187775-45187805.0,TGGGGCATCAGTGGGGGTCC,GGACCCCCACTGATGCCCCA,NGG,60,2:1 | 3:59,0.292531,0.107822,1,NC_000019.10:45187778-45187800,-,
+rs73566243,chr19:45193746-45193776,chr19:45193746-45193776.0,TTCAGTGACTACACAGCAAA,TTTGCTGTGTAGTCACTGAA,NGG,45,2:0 | 3:45,0.445257,0.19347,1,NC_000019.10:45193746-45193768,-,
+rs346750,chr19:45233944-45233974,chr19:45233944-45233974.0,GGTGCCGGAGCTCTTATTCT,GGTGCCGGAGCTCTTATTCT,NGG,6,2:0 | 3:6,0.408255,0.594542,1,NC_000019.10:45233945-45233967,+,
+rs346750,chr19:45233944-45233974,chr19:45233944-45233974.1,CAGTCCTAGAATAAGAGCTC,GAGCTCTTATTCTAGGACTG,NGG,18,2:0 | 3:18,0.549853,0.334418,2,NC_000019.10:45233949-45233971,-,
+rs11673093,chr19:45238820-45238850,chr19:45238820-45238850.0,TTCCGGCTGGGCTGGGCCCC,GGGGCCCAGCCCAGCCGGAA,NGG,53,2:0 | 3:53,0.287527,0.110951,1,NC_000019.10:45238825-45238847,-,exocyst complex component 3 like 2
+rs11673093,chr19:45238820-45238850,chr19:45238820-45238850.1,CGGGGCCCAGCCCAGCCGGA,CGGGGCCCAGCCCAGCCGGA,NGG,57,2:2 | 3:55,0.381568,0.11286,2,NC_000019.10:45238827-45238849,+,exocyst complex component 3 like 2
+rs11673093,chr19:45238820-45238850,chr19:45238820-45238850.2,GGGGCCCAGCCCAGCCGGAA,GGGGCCCAGCCCAGCCGGAA,NGG,69,2:22 | 3:47,0.32949,0.125382,3,NC_000019.10:45238828-45238850,+,exocyst complex component 3 like 2
+rs11673093,chr19:45238820-45238850,chr19:45238820-45238850.3,CTTCCGGCTGGGCTGGGCCC,GGGCCCAGCCCAGCCGGAAG,NGG,93,2:5 | 3:88,0.275578,0.086576,4,NC_000019.10:45238826-45238848,-,exocyst complex component 3 like 2
+rs345421,chr19:45266475-45266505,chr19:45266475-45266505.0,GCGGATGGGGGGGAGGGGAC,GCGGATGGGGGGGAGGGGAC,NGG,226,2:2 | 3:224,0.354944,0.0274051,1,NC_000019.10:45266481-45266503,+,
+rs345421,chr19:45266475-45266505,chr19:45266475-45266505.1,GGGGGAGCGGATGGGGGGGA,GGGGGAGCGGATGGGGGGGA,NGG,432,2:21 | 3:411,0.39697,0.0100107,2,NC_000019.10:45266475-45266497,+,
+rs345421,chr19:45266475-45266505,chr19:45266475-45266505.0,GCGGATGGGGGGGAGGGGAC,GCGGATGGGGGGGAGGGGAC,NGG,226,2:2 | 3:224,0.354944,0.0274051,1,NC_000019.10:45266481-45266503,+,
+rs345421,chr19:45266475-45266505,chr19:45266475-45266505.1,GGGGGAGCGGATGGGGGGGA,GGGGGAGCGGATGGGGGGGA,NGG,432,2:21 | 3:411,0.39697,0.0100107,2,NC_000019.10:45266475-45266497,+,
+rs12973246,chr19:45332930-45332960,chr19:45332930-45332960.0,TCTCTTTCTCGGTCCCGGCA,TGCCGGGACCGAGAAAGAGA,NGG,6,2:0 | 3:6,0.543829,0.627545,1,NC_000019.10:45332938-45332960,-,
+rs12973246,chr19:45332930-45332960,chr19:45332930-45332960.0,TCTCTTTCTCGGTCCCGGCA,TGCCGGGACCGAGAAAGAGA,NGG,6,2:0 | 3:6,0.543829,0.627545,1,NC_000019.10:45332938-45332960,-,
+rs77988534,chr19:45341234-45341264,chr19:45341234-45341264.0,GTGTCAGGCTGTGGGTATGA,GTGTCAGGCTGTGGGTATGA,NGG,45,2:6 | 3:39,0.580588,0.145283,1,NC_000019.10:45341238-45341260,+,
+rs77988534,chr19:45341234-45341264,chr19:45341234-45341264.1,TGTGTCAGGCTGTGGGTATG,TGTGTCAGGCTGTGGGTATG,NGG,81,2:5 | 3:76,0.511821,0.121045,2,NC_000019.10:45341237-45341259,+,
+rs10423015,chr19:45451772-45451802,chr19:45451772-45451802.0,GTGGTTTGCACTTGTGTATC,GTGGTTTGCACTTGTGTATC,NGG,42,2:0 | 3:42,0.173599,0.255589,1,NC_000019.10:45451775-45451797,+,
+rs10423015,chr19:45451772-45451802,chr19:45451772-45451802.1,TGGTTTGCACTTGTGTATCT,TGGTTTGCACTTGTGTATCT,NGG,50,2:4 | 3:46,0.458738,0.255429,2,NC_000019.10:45451776-45451798,+,
+rs3865444,chr19:51224690-51224720,chr19:51224690-51224720.0,ACTAAACACCCCATGGATCT,ACTAAACACCCCATGGATCT,NGG,33,2:0 | 3:33,0.423653,0.289099,1,NC_000019.10:51224695-51224717,+,"CD33 molecule, transcript variant X2"
+rs6127744,chr20:56411202-56411232,chr20:56411202-56411232.0,TTGAGCCTGGCTTGGAAGAA,TTGAGCCTGGCTTGGAAGAA,NGG,78,2:6 | 3:72,0.406867,0.0979908,1,NC_000020.11:56411209-56411231,+,
+rs6127744,chr20:56411202-56411232,chr20:56411202-56411232.1,TGAGCCTGGCTTGGAAGAAT,TGAGCCTGGCTTGGAAGAAT,NGG,80,2:1 | 3:79,0.438048,0.145274,2,NC_000020.11:56411210-56411232,+,
+rs75087725,chr21:44333218-44333248,chr21:44333218-44333248.0,GCACCGGCTCACAGGCTCCA,GCACCGGCTCACAGGCTCCA,NGG,34,2:4 | 3:30,0.570586,0.174553,1,NC_000021.9:44333223-44333245,+,"cilia and flagella associated protein 410, transcript variant X1"
+rs75087725,chr21:44333218-44333248,chr21:44333218-44333248.1,GGCACCGGCTCACAGGCTCC,GGCACCGGCTCACAGGCTCC,NGG,36,2:4 | 3:32,0.40113,0.143454,2,NC_000021.9:44333222-44333244,+,"cilia and flagella associated protein 410, transcript variant X1"
+rs75087725,chr21:44333218-44333248,chr21:44333218-44333248.2,CCGGCTCACAGGCTCCAGGG,CCGGCTCACAGGCTCCAGGG,NGG,58,2:4 | 3:54,0.688577,0.154843,3,NC_000021.9:44333226-44333248,+,"cilia and flagella associated protein 410, transcript variant X1"
+rs75087725,chr21:44333218-44333248,chr21:44333218-44333248.3,CCACCCTGGAGCCTGTGAGC,GCTCACAGGCTCCAGGGTGG,NGG,99,2:5 | 3:94,0.499058,0.0816407,4,NC_000021.9:44333226-44333248,-,"cilia and flagella associated protein 410, transcript variant X1"

data/GuideScan2/GuideScan2_30bp_cpf1-.csv

@@ -0,0 +1,62 @@
+Region-name,gRNA-ID,gRNA-Seq,Target-Seq,PAM,Number of off-targets,Off-target summary,Cutting efficiency,Specificity,Rank,Coordinates,Strand,Annotations
+chr1:161185586-161185616,chr1:161185586-161185616.0,TTNAATGTATTAACATTTTA,TAAAATGTTAATACATTNAA,TTG,153,2:3 | 3:150,N/A,N/A,1,NC_000001.11:161185592-161185615,-,"ADAM metallopeptidase with thrombospondin type 1 motif 4, transcript variant 1"
+chr10:59908043-59908073,chr10:59908043-59908073.0,TTNAGCTGTTTGCTAAAAGC,GCTTTTAGCAAACAGCTNAA,AGC,15,2:0 | 3:15,N/A,N/A,1,NC_000010.11:59908047-59908070,-,
+chr11:47395616-47395646,chr11:47395616-47395646.0,TTTNATGGCTATAATAAATC,TTTNATGGCTATAATAAATC,AAA,20,2:1 | 3:19,N/A,N/A,1,NC_000011.10:47395621-47395644,+,"Spi-1 proto-oncogene, transcript variant X1"
+chr11:47395616-47395646,chr11:47395616-47395646.1,TTNATTTATTATAGCCATGA,TCATGGCTATAATAAATNAA,AAT,99,2:7 | 3:92,N/A,N/A,2,NC_000011.10:47395620-47395643,-,"Spi-1 proto-oncogene, transcript variant X1"
+chr11:86158679-86158709,chr11:86158679-86158709.0,TTNTCTTGCATATCGTAGGA,TCCTACGATATGCAAGANAA,GGT,2,2:0 | 3:2,N/A,N/A,1,NC_000011.10:86158686-86158709,-,
+chr11:86163264-86163294,chr11:86163264-86163294.0,TTTNATTCAAACAGCATATA,TTTNATTCAAACAGCATATA,TTG,25,2:0 | 3:25,N/A,N/A,1,NC_000011.10:86163269-86163292,+,
+chr11:86163264-86163294,chr11:86163264-86163294.1,TTTNTTCAAACAGCATATAT,TTTNTTCAAACAGCATATAT,TGT,33,2:0 | 3:33,N/A,N/A,2,NC_000011.10:86163270-86163293,+,
+chr11:86163264-86163294,chr11:86163264-86163294.2,TTTNATTTTATTCAAACAGC,TTTNATTTTATTCAAACAGC,ATA,89,2:2 | 3:87,N/A,N/A,3,NC_000011.10:86163264-86163287,+,
+chr11:133949506-133949536,chr11:133949506-133949536.0,TTNGTTTCCCCCTGTATTTG,CAAATACAGGGGGAAACNAA,GGT,6,2:0 | 3:6,N/A,N/A,1,NC_000011.10:133949507-133949530,-,
+chr12:40259692-40259722,chr12:40259692-40259722.0,TTNGTCGACAGAAACTAGTC,GACTAGTTTCTGTCGACNAA,TTT,0,2:0 | 3:0,N/A,N/A,1,NC_000012.12:40259693-40259716,-,
+chr12:40259692-40259722,chr12:40259692-40259722.1,TTNCATTTAGTCGACAGAAA,TTTCTGTCGACTAAATGNAA,CTA,2,2:1 | 3:1,N/A,N/A,2,NC_000012.12:40259699-40259722,-,
+chr14:92464085-92464115,chr14:92464085-92464115.0,TTNGTCTCTTAAAAAACCCA,TGGGTTTTTTAAGAGACNAA,CTC,17,2:1 | 3:16,N/A,N/A,1,NC_000014.9:92464085-92464108,-,
+chr14:92464085-92464115,chr14:92464085-92464115.1,TTTNTTAAGAGACCAAATAG,TTTNTTAAGAGACCAAATAG,AGC,19,2:0 | 3:19,N/A,N/A,2,NC_000014.9:92464092-92464115,+,
+chr15:50529045-50529075,chr15:50529045-50529075.0,TTNCTGAAGGAAAGAAAGCA,TGCTTTCTTTCCTTCAGNAA,TGG,38,2:1 | 3:37,N/A,N/A,1,NC_000015.10:50529047-50529070,-,
+chr19:44839542-44839572,chr19:44839542-44839572.0,TTNCTACCAACTTCTCTTTA,TAAAGAGAAGTTGGTAGNAA,CTT,32,2:0 | 3:32,N/A,N/A,1,NC_000019.10:44839548-44839571,-,
+chr19:44874871-44874901,chr19:44874871-44874901.0,TTNGCTCCGTGCCTTGGGGC,GCCCCAAGGCACGGAGCNAA,CGG,0,2:0 | 3:0,N/A,N/A,1,NC_000019.10:44874872-44874895,-,
+chr19:44877697-44877727,chr19:44877697-44877727.0,TTTNTGAGGACCCCACAGCA,TTTNTGAGGACCCCACAGCA,CAT,1,2:0 | 3:1,N/A,N/A,1,NC_000019.10:44877704-44877727,+,
+chr19:44924375-44924405,chr19:44924375-44924405.0,TTNGGGACATGAGTAGGCTG,CAGCCTACTCATGTCCCNAA,AAG,2,2:0 | 3:2,N/A,N/A,1,NC_000019.10:44924380-44924403,-,
+chr19:44924375-44924405,chr19:44924375-44924405.1,TTNAGGGACATGAGTAGGCT,AGCCTACTCATGTCCCTNAA,GAA,7,2:0 | 3:7,N/A,N/A,2,NC_000019.10:44924381-44924404,-,
+chr19:45040481-45040511,chr19:45040481-45040511.0,TTTNTTGTAGCATACTGTGT,TTTNTTGTAGCATACTGTGT,CGT,2,2:0 | 3:2,N/A,N/A,1,NC_000019.10:45040485-45040508,+,
+chr19:45193746-45193776,chr19:45193746-45193776.0,TTTNGCTGTGTAGTCACTGA,TTTNGCTGTGTAGTCACTGA,AGT,7,2:1 | 3:6,N/A,N/A,1,NC_000019.10:45193747-45193770,+,
+chr19:45193746-45193776,chr19:45193746-45193776.1,TTTNCTGTGTAGTCACTGAA,TTTNCTGTGTAGTCACTGAA,GTT,24,2:0 | 3:24,N/A,N/A,2,NC_000019.10:45193748-45193771,+,
+chr19:45212918-45212948,chr19:45212918-45212948.0,TTTNGGGTTGGGTGAAAAGA,TTTNGGGTTGGGTGAAAAGA,CAT,6,2:0 | 3:6,N/A,N/A,1,NC_000019.10:45212923-45212946,+,exocyst complex component 3 like 2
+chr19:45303279-45303309,chr19:45303279-45303309.0,TTTNAAGTTATTACACCCCG,TTTNAAGTTATTACACCCCG,ACC,1,2:0 | 3:1,N/A,N/A,1,NC_000019.10:45303279-45303302,+,"microtubule affinity regulating kinase 4, transcript variant 2"
+chr19:45303279-45303309,chr19:45303279-45303309.1,TTTNAGTTATTACACCCCGA,TTTNAGTTATTACACCCCGA,CCC,1,2:0 | 3:1,N/A,N/A,2,NC_000019.10:45303280-45303303,+,"microtubule affinity regulating kinase 4, transcript variant 2"
+chr19:45332930-45332960,chr19:45332930-45332960.0,TTNTCGGTCCCGGCAAGGAG,CTCCTTGCCGGGACCGANAA,CGA,0,2:0 | 3:0,N/A,N/A,1,NC_000019.10:45332932-45332955,-,
+chr19:45341234-45341264,chr19:45341234-45341264.0,TTNACCCTCATACCCACAGC,GCTGTGGGTATGAGGGTNAA,CTG,7,2:0 | 3:7,N/A,N/A,1,NC_000019.10:45341241-45341264,-,
+chr19:45451772-45451802,chr19:45451772-45451802.0,TTTNCACTTGTGTATCTGGG,TTTNCACTTGTGTATCTGGG,TGT,14,2:0 | 3:14,N/A,N/A,1,NC_000019.10:45451778-45451801,+,
+chr2:127068941-127068971,chr2:127068941-127068971.0,TTTNTGGCAGTTTGAAGGGA,TTTNTGGCAGTTTGAAGGGA,CTC,2,2:0 | 3:2,N/A,N/A,1,NC_000002.12:127068948-127068971,+,"bridging integrator 1, transcript variant 15"
+chr2:127104174-127104204,chr2:127104174-127104204.0,TTNGGCCTGACGCAGGCTGA,TCAGCCTGCGTCAGGCCNAA,TGG,2,2:0 | 3:2,N/A,N/A,1,NC_000002.12:127104176-127104199,-,
+chr2:127115976-127116006,chr2:127115976-127116006.0,TTTNTTTATCAACACGCCCA,TTTNTTTATCAACACGCCCA,CAA,3,2:0 | 3:3,N/A,N/A,1,NC_000002.12:127115976-127115999,+,
+chr2:127133341-127133371,chr2:127133341-127133371.0,TTNTGTTATTAGAGGTGTGA,TCACACCTCTAATAACANAA,CCC,12,2:0 | 3:12,N/A,N/A,1,NC_000002.12:127133344-127133367,-,
+chr2:134707030-134707060,chr2:134707030-134707060.0,TTTNTCGTTCCCAAGCACAC,TTTNTCGTTCCCAAGCACAC,CCA,1,2:0 | 3:1,N/A,N/A,1,NC_000002.12:134707033-134707056,+,
+chr4:89689160-89689190,chr4:89689160-89689190.0,TTNAAGATGCAGGTAGGGAG,CTCCCTACCTGCATCTTNAA,CCA,58,2:7 | 3:51,N/A,N/A,1,NC_000004.12:89689164-89689187,-,
+chr4:89781614-89781644,chr4:89781614-89781644.0,TTNAGAGTAAATGTGAGCTG,CAGCTCACATTTACTCTNAA,CAA,7,2:0 | 3:7,N/A,N/A,1,NC_000004.12:89781620-89781643,-,
+chr6:4032340-4032370,chr6:4032340-4032370.0,TTNATTTATAATTGGGGATT,AATCCCCAATTATAAATNAA,TTT,78,2:3 | 3:75,N/A,N/A,1,NC_000006.12:4032340-4032363,-,"pre-mRNA processing factor 4B, transcript variant 4"
+chr6:3657961-3657991,chr6:3657961-3657991.0,TTTNTACAAGGAGGCAGTGA,TTTNTACAAGGAGGCAGTGA,CTC,8,2:0 | 3:8,N/A,N/A,1,NC_000006.12:3657965-3657988,+,
+chr6:3852310-3852340,chr6:3852310-3852340.0,TTTNAACTTCCCAATTCAAA,TTTNAACTTCCCAATTCAAA,GGT,7,2:1 | 3:6,N/A,N/A,1,NC_000006.12:3852315-3852338,+,
+chr6:3852310-3852340,chr6:3852310-3852340.1,TTNAATTGGGAAGTTTAAAA,TTTTAAACTTCCCAATTNAA,GCT,22,2:1 | 3:21,N/A,N/A,2,NC_000006.12:3852311-3852334,-,
+chr6:3852310-3852340,chr6:3852310-3852340.2,TTTNAAACTTCCCAATTCAA,TTTNAAACTTCCCAATTCAA,AGG,23,2:1 | 3:22,N/A,N/A,3,NC_000006.12:3852314-3852337,+,
+chr6:3711026-3711056,chr6:3711026-3711056.0,TTNTGGAACAATCCATATTA,TAATATGGATTGTTCCANAA,GAG,0,2:0 | 3:0,N/A,N/A,1,NC_000006.12:3711029-3711052,-,
+chr6:3711026-3711056,chr6:3711026-3711056.1,TTNGGAACAATCCATATTAG,CTAATATGGATTGTTCCNAA,AGA,3,2:0 | 3:3,N/A,N/A,2,NC_000006.12:3711028-3711051,-,
+chr6:3711026-3711056,chr6:3711026-3711056.2,TTNGAACAATCCATATTAGA,TCTAATATGGATTGTTCNAA,GAT,9,2:1 | 3:8,N/A,N/A,3,NC_000006.12:3711027-3711050,-,
+chr6:3721895-3721925,chr6:3721895-3721925.0,TTNCTGTTACTAGTCCGTGC,GCACGGACTAGTAACAGNAA,GCA,0,2:0 | 3:0,N/A,N/A,1,NC_000006.12:3721896-3721919,-,
+chr6:3721895-3721925,chr6:3721895-3721925.1,TTNACTGTTACTAGTCCGTG,CACGGACTAGTAACAGTNAA,CGC,0,2:0 | 3:0,N/A,N/A,2,NC_000006.12:3721897-3721920,-,
+chr6:4029661-4029691,chr6:4029661-4029691.0,TTNCTGAGAAAGGACAGGGA,TCCCTGTCCTTTCTCAGNAA,TTA,14,2:0 | 3:14,N/A,N/A,1,NC_000006.12:4029666-4029689,-,
+chr6:3747764-3747794,chr6:3747764-3747794.0,TTTNTCTTGTTACTATTGGA,TTTNTCTTGTTACTATTGGA,TTT,32,2:0 | 3:32,N/A,N/A,1,NC_000006.12:3747767-3747790,+,
+chr6:3595324-3595354,chr6:3595324-3595354.0,TTNTATCCTGGCTTGTGGCC,GGCCACAAGCCAGGATANAA,GGG,1,2:0 | 3:1,N/A,N/A,1,NC_000006.12:3595331-3595354,-,
+chr6:3816261-3816291,chr6:3816261-3816291.0,TTTNTAATATGTCACAGTTT,TTTNTAATATGTCACAGTTT,TGA,48,2:1 | 3:47,N/A,N/A,1,NC_000006.12:3816268-3816291,+,
+chr6:3876230-3876260,chr6:3876230-3876260.0,TTNGCCCTGAAGAGCCAAGA,TCTTGGCTCTTCAGGGCNAA,TGT,11,2:0 | 3:11,N/A,N/A,1,NC_000006.12:3876231-3876254,-,
+chr6:3721936-3721966,chr6:3721936-3721966.0,TTNGCTCCCCAACCTCATCC,GGATGAGGTTGGGGAGCNAA,CCT,5,2:0 | 3:5,N/A,N/A,1,NC_000006.12:3721942-3721965,-,
+chr6:4018970-4019000,chr6:4018970-4019000.0,TTTNCTTTAATTGTAACTCC,TTTNCTTTAATTGTAACTCC,CCC,7,2:0 | 3:7,N/A,N/A,1,NC_000006.12:4018975-4018998,+,
+chr6:4113608-4113638,chr6:4113608-4113638.0,TTTNCTAAACAGTCTCACTG,TTTNCTAAACAGTCTCACTG,CAG,8,2:0 | 3:8,N/A,N/A,1,NC_000006.12:4113613-4113636,+,
+chr7:23229430-23229460,chr7:23229430-23229460.0,TTTNGAGTTACAAAAAATGC,TTTNGAGTTACAAAAAATGC,TCT,32,2:0 | 3:32,N/A,N/A,1,NC_000007.14:23229434-23229457,+,
+chr8:16840054-16840084,chr8:16840054-16840084.0,TTTNAATTCTTGGTTGGGGA,TTTNAATTCTTGGTTGGGGA,TTG,3,2:0 | 3:3,N/A,N/A,1,NC_000008.11:16840056-16840079,+,
+chr9:27491928-27491958,chr9:27491928-27491958.0,TTTNATATCACTACTTTTAT,TTTNATATCACTACTTTTAT,AGG,14,2:0 | 3:14,N/A,N/A,1,NC_000009.12:27491929-27491952,+,
+chr9:27511270-27511300,chr9:27511270-27511300.0,TTNCTATTAAACTGTTATTT,AAATAACAGTTTAATAGNAA,AAG,78,2:8 | 3:70,N/A,N/A,1,NC_000009.12:27511271-27511294,-,
+chr9:27511270-27511300,chr9:27511270-27511300.1,TTNTATTAAACTGTTATTTA,TAAATAACAGTTTAATANAA,AGT,130,2:8 | 3:122,N/A,N/A,2,NC_000009.12:27511270-27511293,-,
+chr9:27543615-27543645,chr9:27543615-27543645.0,TTTNCCCAGATATTTGTTAT,TTTNCCCAGATATTTGTTAT,TGG,35,2:4 | 3:31,N/A,N/A,1,NC_000009.12:27543621-27543644,+,uncharacterized LOC107987057
+chr9:27543615-27543645,chr9:27543615-27543645.1,TTTNCCAGATATTTGTTATT,TTTNCCAGATATTTGTTATT,GGT,47,2:0 | 3:47,N/A,N/A,2,NC_000009.12:27543622-27543645,+,uncharacterized LOC107987057
+chr9:27584045-27584075,chr9:27584045-27584075.0,TTTNAAATTTGAATACAAAC,TTTNAAATTTGAATACAAAC,AAA,127,2:11 | 3:116,N/A,N/A,1,NC_000009.12:27584050-27584073,+,

data/GuideScan2/GuideScan2_30bp_cpf1.csv

@@ -0,0 +1,56 @@
+query,Region-name,gRNA-ID,gRNA-Seq,Target-Seq,PAM,Number of off-targets,Off-target summary,Cutting efficiency,Specificity,Rank,Coordinates,Strand,Annotations
+rs4575098,chr1:161185586-161185616,chr1:161185586-161185616.0,TTNAATGTATTAACATTTTA,TAAAATGTTAATACATTNAA,TTG,153,2:3 | 3:150,,,1,NC_000001.11:161185592-161185615,-,"ADAM metallopeptidase with thrombospondin type 1 motif 4, transcript variant 1"
+rs1060743,chr2:127068941-127068971,chr2:127068941-127068971.0,TTTNTGGCAGTTTGAAGGGA,TTTNTGGCAGTTTGAAGGGA,CTC,2,2:0 | 3:2,,,1,NC_000002.12:127068948-127068971,+,"bridging integrator 1, transcript variant 15"
+rs4663096,chr2:127104174-127104204,chr2:127104174-127104204.0,TTNGGCCTGACGCAGGCTGA,TCAGCCTGCGTCAGGCCNAA,TGG,2,2:0 | 3:2,,,1,NC_000002.12:127104176-127104199,-,
+rs7594230,chr2:127115976-127116006,chr2:127115976-127116006.0,TTTNTTTATCAACACGCCCA,TTTNTTTATCAACACGCCCA,CAA,3,2:0 | 3:3,,,1,NC_000002.12:127115976-127115999,+,
+rs7594230,chr2:127115976-127116006,chr2:127115976-127116006.0,TTTNTTTATCAACACGCCCA,TTTNTTTATCAACACGCCCA,CAA,3,2:0 | 3:3,,,1,NC_000002.12:127115976-127115999,+,
+rs35968837,chr2:127133341-127133371,chr2:127133341-127133371.0,TTNTGTTATTAGAGGTGTGA,TCACACCTCTAATAACANAA,CCC,12,2:0 | 3:12,,,1,NC_000002.12:127133344-127133367,-,
+rs57891859,chr2:134707030-134707060,chr2:134707030-134707060.0,TTTNTCGTTCCCAAGCACAC,TTTNTCGTTCCCAAGCACAC,CCA,1,2:0 | 3:1,,,1,NC_000002.12:134707033-134707056,+,
+rs57891859,chr2:134707030-134707060,chr2:134707030-134707060.0,TTTNTCGTTCCCAAGCACAC,TTTNTCGTTCCCAAGCACAC,CCA,1,2:0 | 3:1,,,1,NC_000002.12:134707033-134707056,+,
+rs57891859,chr2:134707030-134707060,chr2:134707030-134707060.0,TTTNTCGTTCCCAAGCACAC,TTTNTCGTTCCCAAGCACAC,CCA,1,2:0 | 3:1,,,1,NC_000002.12:134707033-134707056,+,
+rs114088559,chr4:89689160-89689190,chr4:89689160-89689190.0,TTNAAGATGCAGGTAGGGAG,CTCCCTACCTGCATCTTNAA,CCA,58,2:7 | 3:51,,,1,NC_000004.12:89689164-89689187,-,
+rs3775434,chr4:89781614-89781644,chr4:89781614-89781644.0,TTNAGAGTAAATGTGAGCTG,CAGCTCACATTTACTCTNAA,CAA,7,2:0 | 3:7,,,1,NC_000004.12:89781620-89781643,-,
+rs1637190,chr7:23229430-23229460,chr7:23229430-23229460.0,TTTNGAGTTACAAAAAATGC,TTTNGAGTTACAAAAAATGC,TCT,32,2:0 | 3:32,,,1,NC_000007.14:23229434-23229457,+,
+rs620490,chr8:16840054-16840084,chr8:16840054-16840084.0,TTTNAATTCTTGGTTGGGGA,TTTNAATTCTTGGTTGGGGA,TTG,3,2:0 | 3:3,,,1,NC_000008.11:16840056-16840079,+,
+rs620490,chr8:16840054-16840084,chr8:16840054-16840084.0,TTTNAATTCTTGGTTGGGGA,TTTNAATTCTTGGTTGGGGA,TTG,3,2:0 | 3:3,,,1,NC_000008.11:16840056-16840079,+,
+rs620490,chr8:16840054-16840084,chr8:16840054-16840084.0,TTTNAATTCTTGGTTGGGGA,TTTNAATTCTTGGTTGGGGA,TTG,3,2:0 | 3:3,,,1,NC_000008.11:16840056-16840079,+,
+rs139185008,chr9:27491928-27491958,chr9:27491928-27491958.0,TTTNATATCACTACTTTTAT,TTTNATATCACTACTTTTAT,AGG,14,2:0 | 3:14,,,1,NC_000009.12:27491929-27491952,+,
+rs2484314,chr9:27511270-27511300,chr9:27511270-27511300.0,TTNCTATTAAACTGTTATTT,AAATAACAGTTTAATAGNAA,AAG,78,2:8 | 3:70,,,1,NC_000009.12:27511271-27511294,-,
+rs2484314,chr9:27511270-27511300,chr9:27511270-27511300.1,TTNTATTAAACTGTTATTTA,TAAATAACAGTTTAATANAA,AGT,130,2:8 | 3:122,,,2,NC_000009.12:27511270-27511293,-,
+rs147599399,chr9:27543615-27543645,chr9:27543615-27543645.0,TTTNCCCAGATATTTGTTAT,TTTNCCCAGATATTTGTTAT,TGG,35,2:4 | 3:31,,,1,NC_000009.12:27543621-27543644,+,uncharacterized LOC107987057
+rs147599399,chr9:27543615-27543645,chr9:27543615-27543645.1,TTTNCCAGATATTTGTTATT,TTTNCCAGATATTTGTTATT,GGT,47,2:0 | 3:47,,,2,NC_000009.12:27543622-27543645,+,uncharacterized LOC107987057
+rs34555425,chr9:27584045-27584075,chr9:27584045-27584075.0,TTTNAAATTTGAATACAAAC,TTTNAAATTTGAATACAAAC,AAA,127,2:11 | 3:116,,,1,NC_000009.12:27584050-27584073,+,
+rs1171832,chr10:59908043-59908073,chr10:59908043-59908073.0,TTNAGCTGTTTGCTAAAAGC,GCTTTTAGCAAACAGCTNAA,AGC,15,2:0 | 3:15,,,1,NC_000010.11:59908047-59908070,-,
+rs1171832,chr10:59908043-59908073,chr10:59908043-59908073.0,TTNAGCTGTTTGCTAAAAGC,GCTTTTAGCAAACAGCTNAA,AGC,15,2:0 | 3:15,,,1,NC_000010.11:59908047-59908070,-,
+rs10769263,chr11:47395616-47395646,chr11:47395616-47395646.0,TTTNATGGCTATAATAAATC,TTTNATGGCTATAATAAATC,AAA,20,2:1 | 3:19,,,1,NC_000011.10:47395621-47395644,+,"Spi-1 proto-oncogene, transcript variant X1"
+rs10769263,chr11:47395616-47395646,chr11:47395616-47395646.1,TTNATTTATTATAGCCATGA,TCATGGCTATAATAAATNAA,AAT,99,2:7 | 3:92,,,2,NC_000011.10:47395620-47395643,-,"Spi-1 proto-oncogene, transcript variant X1"
+rs7113976,chr11:86158679-86158709,chr11:86158679-86158709.0,TTNTCTTGCATATCGTAGGA,TCCTACGATATGCAAGANAA,GGT,2,2:0 | 3:2,,,1,NC_000011.10:86158686-86158709,-,
+rs7113976,chr11:86158679-86158709,chr11:86158679-86158709.0,TTNTCTTGCATATCGTAGGA,TCCTACGATATGCAAGANAA,GGT,2,2:0 | 3:2,,,1,NC_000011.10:86158686-86158709,-,
+rs11603136,chr11:86163264-86163294,chr11:86163264-86163294.0,TTTNATTCAAACAGCATATA,TTTNATTCAAACAGCATATA,TTG,25,2:0 | 3:25,,,1,NC_000011.10:86163269-86163292,+,
+rs11603136,chr11:86163264-86163294,chr11:86163264-86163294.1,TTTNTTCAAACAGCATATAT,TTTNTTCAAACAGCATATAT,TGT,33,2:0 | 3:33,,,2,NC_000011.10:86163270-86163293,+,
+rs11603136,chr11:86163264-86163294,chr11:86163264-86163294.2,TTTNATTTTATTCAAACAGC,TTTNATTTTATTCAAACAGC,ATA,89,2:2 | 3:87,,,3,NC_000011.10:86163264-86163287,+,
+rs564123,chr11:133949506-133949536,chr11:133949506-133949536.0,TTNGTTTCCCCCTGTATTTG,CAAATACAGGGGGAAACNAA,GGT,6,2:0 | 3:6,,,1,NC_000011.10:133949507-133949530,-,
+rs564123,chr11:133949506-133949536,chr11:133949506-133949536.0,TTNGTTTCCCCCTGTATTTG,CAAATACAGGGGGAAACNAA,GGT,6,2:0 | 3:6,,,1,NC_000011.10:133949507-133949530,-,
+rs28903073,chr12:40259692-40259722,chr12:40259692-40259722.0,TTNGTCGACAGAAACTAGTC,GACTAGTTTCTGTCGACNAA,TTT,0,2:0 | 3:0,,,1,NC_000012.12:40259693-40259716,-,
+rs28903073,chr12:40259692-40259722,chr12:40259692-40259722.1,TTNCATTTAGTCGACAGAAA,TTTCTGTCGACTAAATGNAA,CTA,2,2:1 | 3:1,,,2,NC_000012.12:40259699-40259722,-,
+rs61977311,chr14:92464085-92464115,chr14:92464085-92464115.0,TTNGTCTCTTAAAAAACCCA,TGGGTTTTTTAAGAGACNAA,CTC,17,2:1 | 3:16,,,1,NC_000014.9:92464085-92464108,-,
+rs61977311,chr14:92464085-92464115,chr14:92464085-92464115.1,TTTNTTAAGAGACCAAATAG,TTTNTTAAGAGACCAAATAG,AGC,19,2:0 | 3:19,,,2,NC_000014.9:92464092-92464115,+,
+rs3098199,chr15:50529045-50529075,chr15:50529045-50529075.0,TTNCTGAAGGAAAGAAAGCA,TGCTTTCTTTCCTTCAGNAA,TGG,38,2:1 | 3:37,,,1,NC_000015.10:50529047-50529070,-,
+rs1466435,chr19:44839542-44839572,chr19:44839542-44839572.0,TTNCTACCAACTTCTCTTTA,TAAAGAGAAGTTGGTAGNAA,CTT,32,2:0 | 3:32,,,1,NC_000019.10:44839548-44839571,-,
+rs34278513,chr19:44874871-44874901,chr19:44874871-44874901.0,TTNGCTCCGTGCCTTGGGGC,GCCCCAAGGCACGGAGCNAA,CGG,0,2:0 | 3:0,,,1,NC_000019.10:44874872-44874895,-,
+rs11668861,chr19:44877697-44877727,chr19:44877697-44877727.0,TTTNTGAGGACCCCACAGCA,TTTNTGAGGACCCCACAGCA,CAT,1,2:0 | 3:1,,,1,NC_000019.10:44877704-44877727,+,
+rs11668861,chr19:44877697-44877727,chr19:44877697-44877727.0,TTTNTGAGGACCCCACAGCA,TTTNTGAGGACCCCACAGCA,CAT,1,2:0 | 3:1,,,1,NC_000019.10:44877704-44877727,+,
+rs4803771,chr19:44924375-44924405,chr19:44924375-44924405.0,TTNGGGACATGAGTAGGCTG,CAGCCTACTCATGTCCCNAA,AAG,2,2:0 | 3:2,,,1,NC_000019.10:44924380-44924403,-,
+rs4803771,chr19:44924375-44924405,chr19:44924375-44924405.1,TTNAGGGACATGAGTAGGCT,AGCCTACTCATGTCCCTNAA,GAA,7,2:0 | 3:7,,,2,NC_000019.10:44924381-44924404,-,
+rs4803771,chr19:44924375-44924405,chr19:44924375-44924405.0,TTNGGGACATGAGTAGGCTG,CAGCCTACTCATGTCCCNAA,AAG,2,2:0 | 3:2,,,1,NC_000019.10:44924380-44924403,-,
+rs4803771,chr19:44924375-44924405,chr19:44924375-44924405.1,TTNAGGGACATGAGTAGGCT,AGCCTACTCATGTCCCTNAA,GAA,7,2:0 | 3:7,,,2,NC_000019.10:44924381-44924404,-,
+rs76856627,chr19:45040481-45040511,chr19:45040481-45040511.0,TTTNTTGTAGCATACTGTGT,TTTNTTGTAGCATACTGTGT,CGT,2,2:0 | 3:2,,,1,NC_000019.10:45040485-45040508,+,
+rs73566243,chr19:45193746-45193776,chr19:45193746-45193776.0,TTTNGCTGTGTAGTCACTGA,TTTNGCTGTGTAGTCACTGA,AGT,7,2:1 | 3:6,,,1,NC_000019.10:45193747-45193770,+,
+rs73566243,chr19:45193746-45193776,chr19:45193746-45193776.1,TTTNCTGTGTAGTCACTGAA,TTTNCTGTGTAGTCACTGAA,GTT,24,2:0 | 3:24,,,2,NC_000019.10:45193748-45193771,+,
+rs11667509,chr19:45212918-45212948,chr19:45212918-45212948.0,TTTNGGGTTGGGTGAAAAGA,TTTNGGGTTGGGTGAAAAGA,CAT,6,2:0 | 3:6,,,1,NC_000019.10:45212923-45212946,+,exocyst complex component 3 like 2
+rs183442275,chr19:45303279-45303309,chr19:45303279-45303309.0,TTTNAAGTTATTACACCCCG,TTTNAAGTTATTACACCCCG,ACC,1,2:0 | 3:1,,,1,NC_000019.10:45303279-45303302,+,"microtubule affinity regulating kinase 4, transcript variant 2"
+rs183442275,chr19:45303279-45303309,chr19:45303279-45303309.1,TTTNAGTTATTACACCCCGA,TTTNAGTTATTACACCCCGA,CCC,1,2:0 | 3:1,,,2,NC_000019.10:45303280-45303303,+,"microtubule affinity regulating kinase 4, transcript variant 2"
+rs12973246,chr19:45332930-45332960,chr19:45332930-45332960.0,TTNTCGGTCCCGGCAAGGAG,CTCCTTGCCGGGACCGANAA,CGA,0,2:0 | 3:0,,,1,NC_000019.10:45332932-45332955,-,
+rs12973246,chr19:45332930-45332960,chr19:45332930-45332960.0,TTNTCGGTCCCGGCAAGGAG,CTCCTTGCCGGGACCGANAA,CGA,0,2:0 | 3:0,,,1,NC_000019.10:45332932-45332955,-,
+rs77988534,chr19:45341234-45341264,chr19:45341234-45341264.0,TTNACCCTCATACCCACAGC,GCTGTGGGTATGAGGGTNAA,CTG,7,2:0 | 3:7,,,1,NC_000019.10:45341241-45341264,-,
+rs10423015,chr19:45451772-45451802,chr19:45451772-45451802.0,TTTNCACTTGTGTATCTGGG,TTTNCACTTGTGTATCTGGG,TGT,14,2:0 | 3:14,,,1,NC_000019.10:45451778-45451801,+,