Update requirements.txt

.gitignore

@@ -0,0 +1,11 @@
+.ipynb_checkpoints
+*/.ipynb_checkpoints/*
+__pycache__/
+*/__pycache__/*
+*/config.py
+/Model/Lib
+/Model/Scripts
+/Model/share
+/Model/pyvenv.cfg
+*/best_model_fold2.h5
+.DS_Store

requirements.txt

@@ -1,392 +1,130 @@
 aiofiles==23.2.1
-aiohttp==3.9.1
-aiosignal==1.3.1
-alabaster @ file:///home/ktietz/src/ci/alabaster_1611921544520/work
 altair==5.2.0
-anaconda-client==1.11.0
-anaconda-navigator==2.3.2
-anaconda-project @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_52iciqycjz/croots/recipe/anaconda-project_1660339902500/work
-annotated-types==0.5.0
+annotated-types==0.6.0
+antlr4-python3-runtime==4.8
 anyio==3.7.1
-appdirs==1.4.4
-applaunchservices @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_96v71vcny2/croots/recipe/applaunchservices_1661854626389/work
-appnope @ file:///opt/concourse/worker/volumes/live/6ca6f098-d773-4461-5c91-a24a17435bda/volume/appnope_1606859448531/work
-appscript @ file:///opt/concourse/worker/volumes/live/00049ed6-6263-4a6e-72b9-9d990f6e2f07/volume/appscript_1611427000595/work
-argon2-cffi @ file:///opt/conda/conda-bld/argon2-cffi_1645000214183/work
-argon2-cffi-bindings @ file:///opt/concourse/worker/volumes/live/42cf1b28-e71f-45ed-47b2-50f828088636/volume/argon2-cffi-bindings_1644569709119/work
-arrow @ file:///opt/conda/conda-bld/arrow_1649166651673/work
-astroid @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_9fsa1cbbec/croots/recipe/astroid_1659023133872/work
-astropy @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_0a17b8e9-1fad-48c5-91fb-b4dded6b289flor4xw5u/croots/recipe/astropy_1657786108950/work
 asttokens==2.4.1
-async-timeout==4.0.3
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-attrs @ file:///opt/conda/conda-bld/attrs_1642510447205/work
-Automat @ file:///tmp/build/80754af9/automat_1600298431173/work
-autopep8==2.0.4
-Babel @ file:///tmp/build/80754af9/babel_1620871417480/work
-backcall @ file:///home/ktietz/src/ci/backcall_1611930011877/work
-backports.functools-lru-cache @ file:///tmp/build/80754af9/backports.functools_lru_cache_1618170165463/work
-backports.tempfile @ file:///home/linux1/recipes/ci/backports.tempfile_1610991236607/work
-backports.weakref==1.0.post1
-bcrypt @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_b550nfy8c3/croots/recipe/bcrypt_1659554333520/work
-beautifulsoup4 @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_croot-cdiouih5/beautifulsoup4_1650462164803/work
-binaryornot @ file:///tmp/build/80754af9/binaryornot_1617751525010/work
-bitarray @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_99410e05-b235-43fd-a31c-8dd2d61509a4vi1pzh3o/croots/recipe/bitarray_1657739652745/work
-bkcharts==0.2
-black @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_d0nhgmyc3l/croots/recipe/black_1660237813406/work
-bleach @ file:///opt/conda/conda-bld/bleach_1641577558959/work
-blis==0.7.10
-bokeh @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_4689ce87-cfaa-4ded-b2ca-a10b180c8012082opaxd/croots/recipe/bokeh_1658136657265/work
-boto3 @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_7466793a-6ce0-4cc8-b633-fb7f60016ad6lnn62tpt/croots/recipe/boto3_1657820107850/work
-botocore @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_05d2e560-e0a7-4311-8a55-e8216b7418d7ho9lnfo9/croots/recipe/botocore_1657739494502/work
-Bottleneck @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_29949159-f86f-474b-bc1f-aaa1e0e222b4ofusifik/croots/recipe/bottleneck_1657175564045/work
-brotlipy==0.7.0
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-certifi @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_0ek9yztvu3/croot/certifi_1665076692562/work/certifi
-cffi @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_62rp5d8fd4/croots/recipe/cffi_1659598655556/work
-chardet @ file:///opt/concourse/worker/volumes/live/7e1102c4-8702-40f2-63d6-f260ce5f85e4/volume/chardet_1607706831384/work
-charset-normalizer @ file:///tmp/build/80754af9/charset-normalizer_1630003229654/work
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-click @ file:///opt/concourse/worker/volumes/live/17ca243b-fc66-462b-4bc1-f11ad524e336/volume/click_1646056621177/work
-cloudpickle @ file:///tmp/build/80754af9/cloudpickle_1632508026186/work
-clyent==1.2.2
-colorama @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_b8ecd5af-5e60-48b8-80ac-92164ecb9b9bxkf0tkfp/croots/recipe/colorama_1657009097162/work
-colorcet @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_8a83eeb2-7dbf-4e61-829c-ba42fc3fd6f523ifr0ew/croots/recipe/colorcet_1651851028480/work
+attrs==23.1.0
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 comm==0.2.0
-conda==22.9.0
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-conda-content-trust @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_0afea0f9-bbf5-446c-8d60-8151cc05b029p0nco1nn/croots/recipe/conda-content-trust_1658126375910/work
-conda-pack @ file:///tmp/build/80754af9/conda-pack_1611163042455/work
-conda-package-handling @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_4aholt4czv/croots/recipe/conda-package-handling_1663598478352/work
-conda-repo-cli==1.0.20
-conda-token @ file:///Users/paulyim/miniconda3/envs/c3i/conda-bld/conda-token_1662660369760/work
-conda-verify==3.4.2
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-constantly==15.1.0
-cookiecutter @ file:///opt/conda/conda-bld/cookiecutter_1649151442564/work
-cryptography @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_b470f7cb-c8f1-42c9-b84f-23789ea77e7c9difcqh4/croots/recipe/cryptography_1652101134392/work
-cssselect==1.1.0
-cycler @ file:///tmp/build/80754af9/cycler_1637851556182/work
-cymem==2.0.7
-Cython @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_2bxfxrakym/croots/recipe/cython_1663692778284/work
-cytoolz==0.11.0
-daal4py==2021.6.0
-dask @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_625ab4ad-a7aa-46be-859b-eb7a32fc37bc46adm9wx/croots/recipe/dask-core_1658513219136/work
-dataclasses-json==0.6.3
-datashader @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_543d57cxkz/croots/recipe/datashader_1659349048901/work
-datashape==0.5.4
+confection==0.1.4
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+Cython==3.0.6
 debugpy==1.8.0
-decorator @ file:///opt/conda/conda-bld/decorator_1643638310831/work
-defusedxml @ file:///tmp/build/80754af9/defusedxml_1615228127516/work
-diff-match-patch @ file:///Users/ktietz/demo/mc3/conda-bld/diff-match-patch_1630511840874/work
-dill @ file:///tmp/build/80754af9/dill_1623919422540/work
-distributed @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_ca26b14a-a121-44b5-82b0-dbb6ccf35309a1h39fbg/croots/recipe/distributed_1658520748547/work
+decorator==5.1.1
 distro==1.8.0
-docstring-to-markdown==0.13
-docutils @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_10cfb287-0327-45ef-a38e-53dffd30cef1nwpvy20e/croots/recipe/docutils_1657175439973/work
-en-core-web-md @ https://github.com/explosion/spacy-models/releases/download/en_core_web_md-3.6.0/en_core_web_md-3.6.0-py3-none-any.whl
-entrypoints @ file:///opt/concourse/worker/volumes/live/78b2c4ae-da17-4aa7-7fdc-138f840abf07/volume/entrypoints_1649926486598/work
-et-xmlfile==1.1.0
+en-core-web-sm @ https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-3.7.1/en_core_web_sm-3.7.1-py3-none-any.whl
 exceptiongroup==1.2.0
 executing==2.0.1
+fairseq==0.12.2
 fastapi==0.104.1
-fastjsonschema @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_b5c1gee32t/croots/recipe/python-fastjsonschema_1661368622875/work
 ffmpy==0.3.1
-filelock @ file:///opt/conda/conda-bld/filelock_1647002191454/work
-flake8==6.1.0
-Flask @ file:///home/ktietz/src/ci/flask_1611932660458/work
-fonttools==4.25.0
-frozenlist==1.4.0
+filelock==3.13.1
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 fsspec==2023.10.0
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-future @ file:///opt/concourse/worker/volumes/live/f456638c-86a7-4060-7f5f-d499a051219b/volume/future_1607571337593/work
-gensim==4.3.2
-glob2 @ file:///home/linux1/recipes/ci/glob2_1610991677669/work
-gmpy2 @ file:///opt/concourse/worker/volumes/live/3b0f84f9-2a9c-48c9-6340-601e345ea292/volume/gmpy2_1645455548178/work
+ftfy==6.1.3
 gradio==4.7.1
 gradio_client==0.7.0
-greenlet @ file:///opt/concourse/worker/volumes/live/b27b4e9e-4697-4d57-403b-f82d36a391ca/volume/greenlet_1628888146890/work
 h11==0.14.0
-h5py @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_7fnj4n39p5/croots/recipe/h5py_1659091379933/work
-HeapDict @ file:///Users/ktietz/demo/mc3/conda-bld/heapdict_1630598515714/work
-holoviews @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_a4562da9-f241-4c26-af69-a183348d22b8tzntcgqc/croots/recipe/holoviews_1658171511476/work
 httpcore==1.0.2
 httpx==0.25.2
 huggingface-hub==0.19.4
-hvplot @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_20gh5adwn_/croots/recipe/hvplot_1659026499732/work
-hyperlink @ file:///tmp/build/80754af9/hyperlink_1610130746837/work
-idna @ file:///tmp/build/80754af9/idna_1637925883363/work
-imagecodecs @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_bahrk9gfto/croots/recipe/imagecodecs_1664561989889/work
-imageio @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_5460df32-49d6-4565-9afb-ddc7de276101dvh8sph9/croots/recipe/imageio_1658785049436/work
-imagesize @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_4a6ed1be-fe30-4d6a-91d4-f867600caa0be5_dxzvt/croots/recipe/imagesize_1657179500955/work
-importlib-metadata==6.8.0
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 importlib-resources==6.1.1
-incremental @ file:///tmp/build/80754af9/incremental_1636629750599/work
-inflection==0.5.1
-iniconfig @ file:///home/linux1/recipes/ci/iniconfig_1610983019677/work
-intake @ file:///opt/conda/conda-bld/intake_1647436631684/work
-intervaltree @ file:///Users/ktietz/demo/mc3/conda-bld/intervaltree_1630511889664/work
 ipykernel==6.27.1
 ipython==8.18.1
-ipython-genutils @ file:///tmp/build/80754af9/ipython_genutils_1606773439826/work
-ipywidgets @ file:///tmp/build/80754af9/ipywidgets_1634143127070/work
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-itemadapter @ file:///tmp/build/80754af9/itemadapter_1626442940632/work
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-itsdangerous @ file:///tmp/build/80754af9/itsdangerous_1621432558163/work
-jdcal @ file:///Users/ktietz/demo/mc3/conda-bld/jdcal_1630584345063/work
-jedi @ file:///opt/concourse/worker/volumes/live/89be3eb0-a85c-453b-67dd-f706f2fa4c43/volume/jedi_1644315269953/work
-jellyfish @ file:///opt/concourse/worker/volumes/live/a3ea5aa0-13fc-40da-68a6-cbc194ed3c8f/volume/jellyfish_1647962585030/work
+jedi==0.19.1
 Jinja2==3.1.2
-jinja2-time @ file:///opt/conda/conda-bld/jinja2-time_1649251842261/work
-jmespath @ file:///Users/ktietz/demo/mc3/conda-bld/jmespath_1630583964805/work
 joblib==1.3.2
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-jsonpatch==1.33
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-jsonschema @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_d832da7jx3/croots/recipe/jsonschema_1663375475386/work
-jupyter @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_e35x81mm4c/croots/recipe/jupyter_1659349054503/work
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 jupyter_client==8.6.0
 jupyter_core==5.5.0
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-keyring @ file:///opt/concourse/worker/volumes/live/33b3e085-74e6-4f7b-77a0-470eb43e69ae/volume/keyring_1638531366470/work
-kiwisolver @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_ca2945cc-8f2f-407b-8e24-f05d29ee2f4fvto5sdlk/croots/recipe/kiwisolver_1653292053344/work
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 langcodes==3.3.0
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-locket @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_81b4c56b-0395-495d-81c1-83208d36944d357hqdd0/croots/recipe/locket_1652903116052/work
-lxml @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_1902c961-4bd2-4871-a3c5-70b7317a6521kpj7nz2o/croots/recipe/lxml_1657545138937/work
-lz4 @ file:///opt/concourse/worker/volumes/live/5cb15f71-8949-4447-4576-dc636f8e7723/volume/lz4_1619516482660/work
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 markdown-it-py==3.0.0
-MarkupSafe @ file:///opt/concourse/worker/volumes/live/1bcf0940-5bf8-4171-61e3-2133f5885e8b/volume/markupsafe_1621528148241/work
-marshmallow==3.20.1
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-matplotlib-inline @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_9ddl71oqte/croots/recipe/matplotlib-inline_1662014471815/work
-mccabe @ file:///opt/conda/conda-bld/mccabe_1644221741721/work
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 mdurl==0.1.2
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-msgpack @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_8471ad7f-dce1-4146-86d4-c2864258a94duzpja450/croots/recipe/msgpack-python_1652362671722/work
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-nbclient @ file:///opt/concourse/worker/volumes/live/fcea0efc-2a08-48fd-5c55-85ef78e0ea28/volume/nbclient_1650308406463/work
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-nltk @ file:///opt/conda/conda-bld/nltk_1645628263994/work
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-notebook @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_98mevid06x/croots/recipe/notebook_1659083668559/work
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