topic_modelling / funcs /clean_funcs.py
seanpedrickcase's picture
Only aggregate topics not 'other', allowed for minimum sentence length, default max_topics now will auto aggregate topics. Added Cognito Auth functionality (boto3 with AWS).
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import re
import string
import polars as pl
import gradio as gr
# Adding custom words to the stopwords
custom_words = []
my_stop_words = custom_words
# #### Some of my cleaning functions
url_pattern = r'http[s]?://(?:[a-zA-Z]|[0-9]|[$-_@.&+]|[!*\\(\\),]|(?:%[0-9a-fA-F][0-9a-fA-F]))+|(?:www\.)[a-zA-Z0-9._-]+\.[a-zA-Z]{2,}'
html_pattern_regex = r'<.*?>|&([a-z0-9]+|#[0-9]{1,6}|#x[0-9a-f]{1,6});|\xa0|&nbsp;'
html_start_pattern_end_dots_regex = r'<(.*?)\.\.'
non_ascii_pattern = r'[^\x00-\x7F]+'
email_pattern_regex = r'\S*@\S*\s?'
num_pattern_regex = r'[0-9]+'
nums_two_more_regex = r'\b\d+[\.|\,]\d+\b|\b[0-9]{2,}\b|\b[0-9]+\s[0-9]+\b' # Should match two digit numbers or more, and also if there are full stops or commas in between
postcode_pattern_regex = r'(\b(?:[A-Z][A-HJ-Y]?[0-9][0-9A-Z]? ?[0-9][A-Z]{2})|((GIR ?0A{2})\b$)|(?:[A-Z][A-HJ-Y]?[0-9][0-9A-Z]? ?[0-9]{1}?)$)|(\b(?:[A-Z][A-HJ-Y]?[0-9][0-9A-Z]?)\b$)'
multiple_spaces_regex = r'\s{2,}'
def initial_clean(texts, custom_regex, progress=gr.Progress()):
# Convert to polars Series
texts = pl.Series(texts).str.strip_chars()
# Define a list of patterns and their replacements
patterns = [
(url_pattern, ' '),
(html_pattern_regex, ' '),
(html_start_pattern_end_dots_regex, ' '),
(non_ascii_pattern, ' '),
(email_pattern_regex, ' '),
(nums_two_more_regex, ' '),
(postcode_pattern_regex, ' '),
(multiple_spaces_regex, ' ')
]
# Apply each regex replacement
for pattern, replacement in patterns:
texts = texts.str.replace_all(pattern, replacement)
# Convert the series back to a list
texts = texts.to_list()
return texts
def regex_clean(texts, custom_regex, progress=gr.Progress()):
texts = pl.Series(texts).str.strip_chars()
# Allow for custom regex patterns to be removed
if len(custom_regex) > 0:
for pattern in custom_regex:
raw_string_pattern = r'{}'.format(pattern)
print("Removing regex pattern: ", raw_string_pattern)
texts = texts.str.replace_all(raw_string_pattern, ' ')
texts = texts.str.replace_all(multiple_spaces_regex, ' ')
texts = texts.to_list()
return texts
def remove_hyphens(text_text):
return re.sub(r'(\w+)-(\w+)-?(\w)?', r'\1 \2 \3', text_text)
def remove_characters_after_tokenization(tokens):
pattern = re.compile('[{}]'.format(re.escape(string.punctuation)))
filtered_tokens = filter(None, [pattern.sub('', token) for token in tokens])
return filtered_tokens
def convert_to_lowercase(tokens):
return [token.lower() for token in tokens if token.isalpha()]
def remove_short_tokens(tokens):
return [token for token in tokens if len(token) > 3]
def remove_dups_text(data_samples_ready, data_samples_clean, data_samples):
# Identify duplicates in the data: https://stackoverflow.com/questions/44191465/efficiently-identify-duplicates-in-large-list-500-000
# Only identifies the second duplicate
seen = set()
dups = []
for i, doi in enumerate(data_samples_ready):
if doi not in seen:
seen.add(doi)
else:
dups.append(i)
#data_samples_ready[dupes[0:]]
# To see a specific duplicated value you know the position of
#matching = [s for s in data_samples_ready if data_samples_ready[83] in s]
#matching
# Remove duplicates only (keep first instance)
#data_samples_ready = list( dict.fromkeys(data_samples_ready) ) # This way would keep one version of the duplicates
### Remove all duplicates including original instance
# Identify ALL duplicates including initial values
# https://stackoverflow.com/questions/11236006/identify-duplicate-values-in-a-list-in-python
from collections import defaultdict
D = defaultdict(list)
for i,item in enumerate(data_samples_ready):
D[item].append(i)
D = {k:v for k,v in D.items() if len(v)>1}
# https://stackoverflow.com/questions/952914/how-to-make-a-flat-list-out-of-a-list-of-lists
L = list(D.values())
flat_list_dups = [item for sublist in L for item in sublist]
# https://stackoverflow.com/questions/11303225/how-to-remove-multiple-indexes-from-a-list-at-the-same-time
for index in sorted(flat_list_dups, reverse=True):
del data_samples_ready[index]
del data_samples_clean[index]
del data_samples[index]
# Remove blanks
data_samples_ready = [i for i in data_samples_ready if i]
data_samples_clean = [i for i in data_samples_clean if i]
data_samples = [i for i in data_samples if i]
return data_samples_ready, data_samples_clean, flat_list_dups, data_samples