Samuel Sledzieski
commited on
Commit
•
54bf6e6
1
Parent(s):
e497977
update requirements for latest dscript version, update gpu code, remove invalid shape check
Browse files- app.py +0 -1
- requirements.txt +1 -1
app.py
CHANGED
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@@ -149,7 +149,6 @@ def predict(model_name, pairs_file, sequence_file, progress = gr.Progress()):
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lm1 = lm_embed(seq1)
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lm2 = lm_embed(seq2)
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-
print(lm1.shape, lm2.shape, fold1.shape, fold2.shape)
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interaction = model.predict(lm1, lm2, embed_foldseek = do_foldseek, f0 = fold1, f1 = fold2).item()
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results.append([prot1, prot2, interaction])
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lm1 = lm_embed(seq1)
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lm2 = lm_embed(seq2)
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interaction = model.predict(lm1, lm2, embed_foldseek = do_foldseek, f0 = fold1, f1 = fold2).item()
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results.append([prot1, prot2, interaction])
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requirements.txt
CHANGED
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@@ -1,4 +1,4 @@
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-
dscript
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biopython
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pandas
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tqdm
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+
dscript>=0.2.5
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biopython
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pandas
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tqdm
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