code cleaning

app.py

@@ -3,7 +3,10 @@ from hf_mixtral_agent import agent_executor
 from innovation_pathfinder_ai.source_container.container import (
     all_sources
 )
-from innovation_pathfinder_ai.utils import collect_urls
+from innovation_pathfinder_ai.utils.utils import extract_urls
+from innovation_pathfinder_ai.utils import logger
+
+logger = logger.get_console_logger("app")
 
 if __name__ == "__main__":
     
@@ -13,7 +16,7 @@ if __name__ == "__main__":
 
     def bot(history):
         response = infer(history[-1][0], history)
-        sources = collect_urls(all_sources)
+        sources = extract_urls(all_sources)
         src_list = '\n'.join(sources)
         response_w_sources = response['output']+"\n\n\n Sources: \n\n\n"+src_list
         history[-1][1] = response_w_sources

innovation_pathfinder_ai/database/db_handler.py

@@ -2,7 +2,7 @@ from sqlmodel import SQLModel, create_engine, Session, select
 from innovation_pathfinder_ai.database.schema import Sources
 from innovation_pathfinder_ai.utils.logger import get_console_logger
 
-sqlite_file_name = "database.db"
+sqlite_file_name = "innovation_pathfinder_ai/database/database.sqlite3"
 sqlite_url = f"sqlite:///{sqlite_file_name}"
 engine = create_engine(sqlite_url, echo=False)