Upload utils/visualization.py with huggingface_hub
Browse files- utils/visualization.py +208 -0
utils/visualization.py
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| 1 |
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"""Visualization utilities for physics-informed Bayesian optimization."""
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| 2 |
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| 3 |
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from typing import Callable, Dict, List, Optional, Tuple
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import torch
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| 6 |
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from torch import Tensor
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| 7 |
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import numpy as np
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def plot_convergence(
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campaign_df,
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| 12 |
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maximize: bool = True,
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title: str = "Optimization Convergence",
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figsize: Tuple[int, int] = (10, 6),
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):
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"""Plot the optimization convergence curve.
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| 17 |
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| 18 |
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Args:
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| 19 |
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campaign_df: DataFrame from OptimizationCampaign.to_dataframe().
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| 20 |
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maximize: Whether the objective is being maximized.
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| 21 |
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title: Plot title.
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| 22 |
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figsize: Figure size.
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| 23 |
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| 24 |
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Returns:
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| 25 |
+
matplotlib Figure.
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| 26 |
+
"""
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| 27 |
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import matplotlib.pyplot as plt
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| 28 |
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| 29 |
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fig, (ax1, ax2) = plt.subplots(1, 2, figsize=figsize)
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| 31 |
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objectives = campaign_df["objective"].values
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# Left: all observations
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ax1.plot(range(len(objectives)), objectives, "o-", alpha=0.6, markersize=4)
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ax1.set_xlabel("Experiment Number")
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| 36 |
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ax1.set_ylabel("Objective")
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| 37 |
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ax1.set_title("All Observations")
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ax1.grid(True, alpha=0.3)
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# Right: best-so-far
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if maximize:
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best_so_far = np.maximum.accumulate(objectives)
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else:
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best_so_far = np.minimum.accumulate(objectives)
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| 45 |
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ax2.plot(range(len(best_so_far)), best_so_far, "s-", color="green", markersize=4)
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ax2.set_xlabel("Experiment Number")
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ax2.set_ylabel("Best Objective")
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| 49 |
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ax2.set_title("Best So Far")
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| 50 |
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ax2.grid(True, alpha=0.3)
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fig.suptitle(title, fontsize=14)
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plt.tight_layout()
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return fig
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| 57 |
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def plot_surrogate_1d(
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| 58 |
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surrogate,
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| 59 |
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bounds: Tuple[float, float],
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| 60 |
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X_observed: Optional[Tensor] = None,
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| 61 |
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y_observed: Optional[Tensor] = None,
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| 62 |
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physics_fn: Optional[Callable] = None,
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| 63 |
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true_fn: Optional[Callable] = None,
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| 64 |
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n_grid: int = 200,
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| 65 |
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title: str = "Surrogate Model",
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| 66 |
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figsize: Tuple[int, int] = (10, 6),
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| 67 |
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):
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| 68 |
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"""Plot a 1D surrogate model with confidence intervals.
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| 69 |
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| 70 |
+
Args:
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| 71 |
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surrogate: A SurrogateModel instance.
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| 72 |
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bounds: (lower, upper) for the 1D input.
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| 73 |
+
X_observed: Observed inputs (n, 1).
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| 74 |
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y_observed: Observed outputs (n, 1).
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| 75 |
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physics_fn: Optional physics model for comparison.
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| 76 |
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true_fn: Optional true function for comparison.
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| 77 |
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n_grid: Number of grid points.
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| 78 |
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title: Plot title.
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| 79 |
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figsize: Figure size.
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| 80 |
+
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| 81 |
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Returns:
|
| 82 |
+
matplotlib Figure.
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| 83 |
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"""
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| 84 |
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import matplotlib.pyplot as plt
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| 85 |
+
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| 86 |
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fig, ax = plt.subplots(figsize=figsize)
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| 87 |
+
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| 88 |
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X_grid = torch.linspace(bounds[0], bounds[1], n_grid).unsqueeze(-1).to(torch.float64)
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| 89 |
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mean, var = surrogate.predict(X_grid)
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| 90 |
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std = var.sqrt()
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| 91 |
+
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| 92 |
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x_np = X_grid.squeeze().numpy()
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| 93 |
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mean_np = mean.squeeze().detach().numpy()
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| 94 |
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std_np = std.squeeze().detach().numpy()
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| 95 |
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| 96 |
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# Surrogate prediction
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| 97 |
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ax.plot(x_np, mean_np, "b-", label="Surrogate Mean", linewidth=2)
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| 98 |
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ax.fill_between(
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| 99 |
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x_np,
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| 100 |
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mean_np - 2 * std_np,
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| 101 |
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mean_np + 2 * std_np,
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| 102 |
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alpha=0.2,
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| 103 |
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color="blue",
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| 104 |
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label="95% CI",
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| 105 |
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)
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| 107 |
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# Physics model
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| 108 |
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if physics_fn is not None:
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| 109 |
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with torch.no_grad():
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| 110 |
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physics_pred = physics_fn(X_grid).squeeze().numpy()
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| 111 |
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ax.plot(x_np, physics_pred, "r--", label="Physics Model", linewidth=1.5)
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| 112 |
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| 113 |
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# True function
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| 114 |
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if true_fn is not None:
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| 115 |
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with torch.no_grad():
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| 116 |
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true_pred = true_fn(X_grid).squeeze().numpy()
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| 117 |
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ax.plot(x_np, true_pred, "k-", label="True Function", linewidth=1.5, alpha=0.7)
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| 118 |
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| 119 |
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# Observations
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| 120 |
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if X_observed is not None and y_observed is not None:
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| 121 |
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ax.scatter(
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| 122 |
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X_observed.squeeze().numpy(),
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| 123 |
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y_observed.squeeze().numpy(),
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| 124 |
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c="red",
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| 125 |
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s=50,
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| 126 |
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zorder=5,
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| 127 |
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label="Observations",
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| 128 |
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edgecolors="black",
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| 129 |
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)
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| 130 |
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| 131 |
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ax.set_xlabel("Input")
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| 132 |
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ax.set_ylabel("Output")
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| 133 |
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ax.set_title(title)
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| 134 |
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ax.legend()
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| 135 |
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ax.grid(True, alpha=0.3)
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| 136 |
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plt.tight_layout()
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| 137 |
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return fig
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| 138 |
+
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| 139 |
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| 140 |
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def plot_surrogate_2d(
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| 141 |
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surrogate,
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| 142 |
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bounds: Tensor,
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| 143 |
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param_names: Tuple[str, str] = ("x1", "x2"),
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| 144 |
+
X_observed: Optional[Tensor] = None,
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| 145 |
+
n_grid: int = 50,
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| 146 |
+
title: str = "Surrogate Model (2D)",
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| 147 |
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figsize: Tuple[int, int] = (12, 5),
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| 148 |
+
):
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| 149 |
+
"""Plot 2D surrogate model as contour plots (mean and uncertainty).
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| 150 |
+
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| 151 |
+
Args:
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| 152 |
+
surrogate: A SurrogateModel instance.
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| 153 |
+
bounds: Tensor of shape (2, 2) with [lower, upper] bounds.
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| 154 |
+
param_names: Names of the two parameters.
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| 155 |
+
X_observed: Observed inputs (n, 2).
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| 156 |
+
n_grid: Grid resolution per dimension.
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| 157 |
+
title: Plot title.
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| 158 |
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figsize: Figure size.
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| 159 |
+
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| 160 |
+
Returns:
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| 161 |
+
matplotlib Figure.
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| 162 |
+
"""
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| 163 |
+
import matplotlib.pyplot as plt
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| 164 |
+
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| 165 |
+
x1 = torch.linspace(float(bounds[0, 0]), float(bounds[1, 0]), n_grid)
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| 166 |
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x2 = torch.linspace(float(bounds[0, 1]), float(bounds[1, 1]), n_grid)
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| 167 |
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X1, X2 = torch.meshgrid(x1, x2, indexing="ij")
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| 168 |
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X_grid = torch.stack([X1.flatten(), X2.flatten()], dim=-1).to(torch.float64)
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| 169 |
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| 170 |
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mean, var = surrogate.predict(X_grid)
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| 171 |
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mean_2d = mean.squeeze().reshape(n_grid, n_grid).detach().numpy()
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| 172 |
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std_2d = var.sqrt().squeeze().reshape(n_grid, n_grid).detach().numpy()
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| 173 |
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| 174 |
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fig, (ax1, ax2) = plt.subplots(1, 2, figsize=figsize)
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| 175 |
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| 176 |
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# Mean
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| 177 |
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c1 = ax1.contourf(
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| 178 |
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X1.numpy(), X2.numpy(), mean_2d, levels=20, cmap="viridis"
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| 179 |
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)
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| 180 |
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plt.colorbar(c1, ax=ax1)
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| 181 |
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ax1.set_xlabel(param_names[0])
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| 182 |
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ax1.set_ylabel(param_names[1])
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| 183 |
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ax1.set_title("Predicted Mean")
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| 184 |
+
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| 185 |
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# Uncertainty
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| 186 |
+
c2 = ax2.contourf(
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| 187 |
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X1.numpy(), X2.numpy(), std_2d, levels=20, cmap="plasma"
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| 188 |
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)
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| 189 |
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plt.colorbar(c2, ax=ax2)
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| 190 |
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ax2.set_xlabel(param_names[0])
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| 191 |
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ax2.set_ylabel(param_names[1])
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| 192 |
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ax2.set_title("Predicted Std Dev")
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| 193 |
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| 194 |
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# Overlay observations
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| 195 |
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if X_observed is not None:
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| 196 |
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for ax in [ax1, ax2]:
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| 197 |
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ax.scatter(
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| 198 |
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X_observed[:, 0].numpy(),
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| 199 |
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X_observed[:, 1].numpy(),
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| 200 |
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c="red",
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| 201 |
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s=30,
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| 202 |
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edgecolors="white",
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| 203 |
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zorder=5,
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)
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| 205 |
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| 206 |
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fig.suptitle(title, fontsize=14)
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| 207 |
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plt.tight_layout()
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| 208 |
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return fig
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