ProteinBench / data_link /protein_folding.csv
zhouxiangxin1998
update BPTI and apo-holo table
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Model,TM-score ↑,RMSD ↓,GDT-TS ↑,lDDT ↑,CA clash (%) ↓,CA break (%) ↓,PepBond break (%) ↓
<a href="https://github.com/google-deepmind/alphafold"> AlphaFold2 </a>,0.871,3.21,0.86,0.904,0.3,0,4.8
<a href="https://github.com/aqlaboratory/openfold/"> OpenFold </a>,0.87,3.21,0.856,0.895,0.4,0,2
<a href="https://github.com/uw-ipd/RoseTTAFold2"> RoseTTAFold2 </a>,0.859,3.52,0.845,0.888,0.3,0.2,5.5
<a href="https://github.com/facebookresearch/esm"> ESMFold </a>,0.847,3.98,0.826,0.87,0.3,0,4.7
<a href="https://github.com/bjing2016/EigenFold"> EigenFold* </a>,0.743,7.65,0.703,0.737,8,0.5,NaN