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Update app.py (#1)
Browse files- Update app.py (0bcfca3df9752a308ef79d01d38a48a8414c7fca)
Co-authored-by: Yoann Poupart <Xmaster6y@users.noreply.huggingface.co>
app.py
CHANGED
@@ -7,11 +7,11 @@ from typing import List
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# Define the COLUMN_MIN_MAX as provided
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COLUMN_MIN_MAX = {
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"Age": (18, 100),
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"Blood_Glucose_Level": (0,
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"Blood_Pressure_Systolic": (
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"Blood_Pressure_Diastolic": (
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"BMI": (
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"Condition_Severity": (
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"Gender": (0, 2),
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"Ethnicity": (0, 5),
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"Geographic_Location": (0, 6),
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@@ -33,7 +33,7 @@ additional_categories = {
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"Ethnicity": ["White", "Black or African American", "Asian", "American Indian or Alaska Native", "Native Hawaiian or Other Pacific Islander", "Other"],
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"Geographic_Location": ["North America", "South America", "Europe", "Asia", "Africa", "Australia", "Antarctica"],
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"Smoking_Status": ["Never", "Former", "Current"],
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"Diagnoses_ICD10": ["
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"Medications": ["Metformin", "Lisinopril", "Atorvastatin", "Amlodipine", "Omeprazole", "Simvastatin", "Levothyroxine", "None"],
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"Allergies": ["Penicillin", "Peanuts", "Shellfish", "Latex", "Bee stings", "None"],
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"Previous_Treatments": ["Chemotherapy", "Radiation Therapy", "Surgery", "Physical Therapy", "Immunotherapy", "None"],
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@@ -48,39 +48,39 @@ additional_categories = {
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min_age_input = gr.Number(label="Minimum Age", value=18, minimum=COLUMN_MIN_MAX["Age"][0], maximum=COLUMN_MIN_MAX["Age"][1])
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max_age_input = gr.Number(label="Maximum Age", value=100, minimum=COLUMN_MIN_MAX["Age"][0], maximum=COLUMN_MIN_MAX["Age"][1])
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gender_input = gr.CheckboxGroup(choices=additional_categories["Gender"], label="Gender")
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ethnicity_input = gr.CheckboxGroup(choices=additional_categories["Ethnicity"], label="Ethnicity")
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geographic_location_input = gr.CheckboxGroup(choices=additional_categories["Geographic_Location"], label="Geographic Location")
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diagnoses_icd10_input = gr.CheckboxGroup(choices=additional_categories["Diagnoses_ICD10"], label="
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medications_input = gr.CheckboxGroup(choices=additional_categories["Medications"], label="Medications")
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allergies_input = gr.CheckboxGroup(choices=additional_categories["Allergies"], label="Allergies")
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previous_treatments_input = gr.CheckboxGroup(choices=additional_categories["Previous_Treatments"], label="Previous Treatments")
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min_blood_glucose_level_input = gr.Number(label="Minimum Blood Glucose Level", value=0, minimum=COLUMN_MIN_MAX["Blood_Glucose_Level"][0], maximum=COLUMN_MIN_MAX["Blood_Glucose_Level"][1])
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max_blood_glucose_level_input = gr.Number(label="Maximum Blood Glucose Level", value=3, minimum=COLUMN_MIN_MAX["Blood_Glucose_Level"][0], maximum=COLUMN_MIN_MAX["Blood_Glucose_Level"][1])
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min_blood_pressure_systolic_input = gr.Number(label="Minimum Blood Pressure (Systolic)", value=0, minimum=COLUMN_MIN_MAX["Blood_Pressure_Systolic"][0], maximum=COLUMN_MIN_MAX["Blood_Pressure_Systolic"][1])
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max_blood_pressure_systolic_input = gr.Number(label="Maximum Blood Pressure (Systolic)", value=3, minimum=COLUMN_MIN_MAX["Blood_Pressure_Systolic"][0], maximum=COLUMN_MIN_MAX["Blood_Pressure_Systolic"][1])
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min_blood_pressure_diastolic_input = gr.Number(label="Minimum Blood Pressure (Diastolic)", value=0, minimum=COLUMN_MIN_MAX["Blood_Pressure_Diastolic"][0], maximum=COLUMN_MIN_MAX["Blood_Pressure_Diastolic"][1])
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max_blood_pressure_diastolic_input = gr.Number(label="Maximum Blood Pressure (Diastolic)", value=3, minimum=COLUMN_MIN_MAX["Blood_Pressure_Diastolic"][0], maximum=COLUMN_MIN_MAX["Blood_Pressure_Diastolic"][1])
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min_bmi_input = gr.Number(label="Minimum BMI", value=0, minimum=COLUMN_MIN_MAX["BMI"][0], maximum=COLUMN_MIN_MAX["BMI"][1])
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max_bmi_input = gr.Number(label="Maximum BMI", value=3, minimum=COLUMN_MIN_MAX["BMI"][0], maximum=COLUMN_MIN_MAX["BMI"][1])
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functional_status_input = gr.CheckboxGroup(choices=additional_categories["Functional_Status"], label="Functional Status")
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previous_trial_participation_input = gr.CheckboxGroup(choices=additional_categories["Previous_Trial_Participation"], label="Previous Trial Participation")
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# Define the server's URL
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SERVER_URL = "
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def encode_categorical_data(data: List[str], category_name: str) -> List[int]:
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"""Encodes a list of categorical values into their corresponding indices based on additional_categories."""
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@@ -189,7 +189,7 @@ def process_researcher_data(
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# Construct the payload as a regular dictionary
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payload = {
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"model_name": "
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"requirements": requirements
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}
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# Define the COLUMN_MIN_MAX as provided
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COLUMN_MIN_MAX = {
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"Age": (18, 100),
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"Blood_Glucose_Level": (0, 300),
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"Blood_Pressure_Systolic": (80, 200),
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"Blood_Pressure_Diastolic": (40, 120),
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"BMI": (10, 50),
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"Condition_Severity": (1, 10),
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"Gender": (0, 2),
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"Ethnicity": (0, 5),
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"Geographic_Location": (0, 6),
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"Ethnicity": ["White", "Black or African American", "Asian", "American Indian or Alaska Native", "Native Hawaiian or Other Pacific Islander", "Other"],
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"Geographic_Location": ["North America", "South America", "Europe", "Asia", "Africa", "Australia", "Antarctica"],
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"Smoking_Status": ["Never", "Former", "Current"],
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"Diagnoses_ICD10": ["Actinic keratosis", "Melanoma", "Dermatofibroma", "Vascular lesion","None"],
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"Medications": ["Metformin", "Lisinopril", "Atorvastatin", "Amlodipine", "Omeprazole", "Simvastatin", "Levothyroxine", "None"],
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"Allergies": ["Penicillin", "Peanuts", "Shellfish", "Latex", "Bee stings", "None"],
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"Previous_Treatments": ["Chemotherapy", "Radiation Therapy", "Surgery", "Physical Therapy", "Immunotherapy", "None"],
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min_age_input = gr.Number(label="Minimum Age", value=18, minimum=COLUMN_MIN_MAX["Age"][0], maximum=COLUMN_MIN_MAX["Age"][1])
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max_age_input = gr.Number(label="Maximum Age", value=100, minimum=COLUMN_MIN_MAX["Age"][0], maximum=COLUMN_MIN_MAX["Age"][1])
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gender_input = gr.CheckboxGroup(choices=additional_categories["Gender"], label="Gender", value=["Male"])
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ethnicity_input = gr.CheckboxGroup(choices=additional_categories["Ethnicity"], label="Ethnicity", value=["White"])
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geographic_location_input = gr.CheckboxGroup(choices=additional_categories["Geographic_Location"], label="Geographic Location", value=["North America"])
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diagnoses_icd10_input = gr.CheckboxGroup(choices=additional_categories["Diagnoses_ICD10"], label="Skin Diagnosis", value=["Actinic keratosis"])
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medications_input = gr.CheckboxGroup(choices=additional_categories["Medications"], label="Medications", value=["Metformin"])
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allergies_input = gr.CheckboxGroup(choices=additional_categories["Allergies"], label="Allergies", value=["Peanuts"])
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previous_treatments_input = gr.CheckboxGroup(choices=additional_categories["Previous_Treatments"], label="Previous Treatments", value=["None"])
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min_blood_glucose_level_input = gr.Number(label="Minimum Blood Glucose Level", value=0, minimum=COLUMN_MIN_MAX["Blood_Glucose_Level"][0], maximum=COLUMN_MIN_MAX["Blood_Glucose_Level"][1])
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max_blood_glucose_level_input = gr.Number(label="Maximum Blood Glucose Level", value=3, minimum=COLUMN_MIN_MAX["Blood_Glucose_Level"][0], maximum=COLUMN_MIN_MAX["Blood_Glucose_Level"][1])
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blood_glucose_level_input = gr.Number(label="Blood Glucose Level", value=100, minimum=COLUMN_MIN_MAX["Blood_Glucose_Level"][0], maximum=COLUMN_MIN_MAX["Blood_Glucose_Level"][1])
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min_blood_pressure_systolic_input = gr.Number(label="Minimum Blood Pressure (Systolic)", value=0, minimum=COLUMN_MIN_MAX["Blood_Pressure_Systolic"][0], maximum=COLUMN_MIN_MAX["Blood_Pressure_Systolic"][1])
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max_blood_pressure_systolic_input = gr.Number(label="Maximum Blood Pressure (Systolic)", value=3, minimum=COLUMN_MIN_MAX["Blood_Pressure_Systolic"][0], maximum=COLUMN_MIN_MAX["Blood_Pressure_Systolic"][1])
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blood_pressure_systolic_input = gr.Number(label="Blood Pressure (Systolic)", value=120, minimum=COLUMN_MIN_MAX["Blood_Pressure_Systolic"][0], maximum=COLUMN_MIN_MAX["Blood_Pressure_Systolic"][1])
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min_blood_pressure_diastolic_input = gr.Number(label="Minimum Blood Pressure (Diastolic)", value=0, minimum=COLUMN_MIN_MAX["Blood_Pressure_Diastolic"][0], maximum=COLUMN_MIN_MAX["Blood_Pressure_Diastolic"][1])
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max_blood_pressure_diastolic_input = gr.Number(label="Maximum Blood Pressure (Diastolic)", value=3, minimum=COLUMN_MIN_MAX["Blood_Pressure_Diastolic"][0], maximum=COLUMN_MIN_MAX["Blood_Pressure_Diastolic"][1])
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blood_pressure_diastolic_input = gr.Number(label="Blood Pressure (Diastolic)", value=80, minimum=COLUMN_MIN_MAX["Blood_Pressure_Diastolic"][0], maximum=COLUMN_MIN_MAX["Blood_Pressure_Diastolic"][1])
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min_bmi_input = gr.Number(label="Minimum BMI", value=0, minimum=COLUMN_MIN_MAX["BMI"][0], maximum=COLUMN_MIN_MAX["BMI"][1])
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max_bmi_input = gr.Number(label="Maximum BMI", value=3, minimum=COLUMN_MIN_MAX["BMI"][0], maximum=COLUMN_MIN_MAX["BMI"][1])
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bmi_input = gr.Number(label="BMI", value=20, minimum=COLUMN_MIN_MAX["BMI"][0], maximum=COLUMN_MIN_MAX["BMI"][1])
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smoking_status_input = gr.CheckboxGroup(choices=additional_categories["Smoking_Status"], label="Smoking Status", value=["Never"])
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alcohol_consumption_input = gr.CheckboxGroup(choices=additional_categories["Alcohol_Consumption"], label="Alcohol Consumption", value=["None"])
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exercise_habits_input = gr.CheckboxGroup(choices=additional_categories["Exercise_Habits"], label="Exercise Habits", value=["Sedentary"])
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diet_input = gr.CheckboxGroup(choices=additional_categories["Diet"], label="Diet", value=["Omnivore"])
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condition_severity_input = gr.Number(label="Condition Severity", value=5, minimum=0, maximum=10)
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functional_status_input = gr.CheckboxGroup(choices=additional_categories["Functional_Status"], label="Functional Status", value=["Independent"])
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previous_trial_participation_input = gr.CheckboxGroup(choices=additional_categories["Previous_Trial_Participation"], label="Previous Trial Participation", value=["No"])
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# Define the server's URL
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SERVER_URL = "https://affordable-prot-bind-clarke.trycloudflare.com/requirements/create" # Ensure this is the correct endpoint
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def encode_categorical_data(data: List[str], category_name: str) -> List[int]:
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"""Encodes a list of categorical values into their corresponding indices based on additional_categories."""
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# Construct the payload as a regular dictionary
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payload = {
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"model_name": "second_model",
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"requirements": requirements
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}
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