add requiretment

pyproject.toml

@@ -0,0 +1,112 @@
+[tool.poetry]
+name = "ontogpt"
+version = "0.2.10"
+description = "OntoGPT"
+authors = ["Chris Mungall <cjmungall@lbl.gov>"]
+license = "BSD-3"
+readme = "README.md"
+
+[tool.poetry.dependencies]
+python = ">=3.9,<3.9.7 || >3.9.7,<4.0"
+click = ">=8.1.3"
+openai = ">=0.27.8"
+oaklib = ">=0.5.15"
+gilda = ">=1.0.0"
+jsonlines = ">=3.1.0"
+python-multipart = "^0.0.5"
+beautifulsoup4 = ">=4.11.1"
+eutils = ">=0.6.0"
+class-resolver = ">=0.4.2"
+inflect = ">=6.0.2"
+bioc = ">=2.0.post5"
+wikipedia = ">=1.4.0"
+tiktoken = ">=0.3.3"
+airium = ">=0.2.5"
+httpx = ">=0.23.3"
+aiohttp = ">=3.8.4"
+inflection = ">=0.5.1"
+nlpcloud = ">=1.0.39"
+fastapi = {version = ">=0.88.0", optional = true}
+uvicorn = {version = ">=0.20.0", optional = true}
+Jinja2 = {version = ">=3.1.2", optional = true}
+sphinx = {version = ">=5.3.0", extras = ["docs"], optional = true}
+sphinx-rtd-theme = {version = ">=1.0.0", extras = ["docs"], optional = true}
+sphinx-autodoc-typehints = {version = ">=1.19.4", extras = ["docs"], optional = true}
+sphinx-click = {version = ">=4.3.0", extras = ["docs"], optional = true}
+myst-parser = {version = ">=0.18.1", extras = ["docs"], optional = true}
+recipe-scrapers = {version = ">=14.35.0", extras = ["recipes"], optional = true}
+textract = {version = "*", extras = ["textract"], optional = true}
+cachier = ">=2.1.0"
+wikipedia-api = ">=0.5.8"
+pystow = "^0.5.0"
+requests-cache = ">=1.0.1"
+streamlit = ">=1.22.0"
+gpt4 = ">=0.0.1"
+"ruamel.yaml" = ">=0.17.31"
+requests = "^2.31.0"
+huggingface_hub  = {version = ">=0.15.1", extras = ["huggingface"], optional = true}
+llm = "^0.6.1"
+llm-gpt4all = "^0.1.1"
+linkml = "^1.5.6"
+linkml-owl = "^0.3.0"
+
+[tool.poetry.dev-dependencies]
+pytest = ">=7.1.2"
+setuptools = ">=65.5.0"
+tox = ">=3.25.1"
+mkdocs-mermaid2-plugin = ">=0.6.0"
+
+[tool.poetry.scripts]
+ontogpt = "ontogpt.cli:main"
+web-ontogpt = "ontogpt.webapp.main:start"
+
+[tool.poetry.extras]
+docs = [
+    "sphinx",
+    "sphinx-rtd-theme",
+    "sphinx-autodoc-typehints",
+    "sphinx-click",
+    "myst-parser"
+    ]
+web = [
+    "fastapi",
+    "uvicorn",
+    "Jinja2"
+]
+recipes = [
+    "recipe-scrapers"
+]
+gpt4all = [
+    "gpt4all"
+]
+textract = [
+    "textract"
+]
+huggingface = [
+    "huggingface_hub"
+]
+
+[tool.poetry.group.dev.dependencies]
+jupyter = "^1.0.0"
+seaborn = "^0.12.2"
+papermill = "^2.4.0"
+
+[tool.poetry-dynamic-versioning]
+enable = false
+vcs = "git"
+style = "pep440"
+
+[tool.black]
+line-length = 100
+target-version = ["py38", "py39", "py310"]
+
+[tool.isort]
+profile = "black"
+multi_line_output = 3
+line_length = 100
+include_trailing_comma = true
+reverse_relative = true
+
+[build-system]
+requires = ["poetry-core>=1.0.0", "poetry-dynamic-versioning"]
+build-backend = "poetry_dynamic_versioning.backend"