mouseland commited on
Commit
44c9541
·
verified ·
1 Parent(s): fab2303

Update app.py

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Files changed (1) hide show
  1. app.py +3 -0
app.py CHANGED
@@ -6,6 +6,7 @@ from cellpose import models
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  from matplotlib.colors import hsv_to_rgb
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  import matplotlib.pyplot as plt
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  import os, io, base64
 
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  try:
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  model = models.CellposeModel(gpu=True, pretrained_model="cyto3")
@@ -113,6 +114,8 @@ def cellpose_segment(img_input):
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  outpix = plot_outlines(img_input, masks)
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  overlay = plot_overlay(img_input, masks)
 
 
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  return outpix, overlay, flows, masks
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  # Gradio Interface
 
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  from matplotlib.colors import hsv_to_rgb
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  import matplotlib.pyplot as plt
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  import os, io, base64
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+ from PIL import Image
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  try:
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  model = models.CellposeModel(gpu=True, pretrained_model="cyto3")
 
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  outpix = plot_outlines(img_input, masks)
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  overlay = plot_overlay(img_input, masks)
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+ masks = Image.fromarray(masks)
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+
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  return outpix, overlay, flows, masks
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  # Gradio Interface