radiobee-aligner / radiobee /interpolate_pset.py
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"""Interpolate np.nan."""
# pylint: disable=invalid-name
from typing import List, Tuple
import numpy as np
import pandas as pd
# fmt: off
def interpolate_pset(
pairs: List[Tuple[int, int, float]],
tgt_len: int,
method: str = 'linear',
limit_direction: str = 'both',
) -> List[Tuple[int, int]]:
# fmt: on
"""Interpolate.
Args:
pairs: integer pairs, some np.nan
tgt_len: over 0...tgt_len-1 (x-axis, cmat.shape[1])
method: for use in pd.DataFrame.interpolate
limit_direction: for use in pd.DataFrame.interpolate
Returns:
np.nan converted
"""
y00, *_ = zip(*pairs)
res = []
for idx in range(tgt_len):
if idx in y00:
loc = y00.index(idx)
res.append(tuple(pairs[loc][:2]))
else:
res.append((idx, np.nan))
df = pd.DataFrame(res, columns=["y00", "yargmax"])
_ = df.interpolate(method=method, limit_direction=limit_direction, axis=0)
_ = _.to_numpy(dtype=int)
_ = [(int(elm0), int(elm1)) for elm0, elm1 in _]
return _