LongLAT / config /Long-LAT_5 /config.json
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{
"model_name_or_path": "../pretrained/ClinicalplusXLNet/",
"tokenizer_name": "yikuan8/Clinical-Longformer",
"output_dir": "../model/",
"overwrite_output_dir": true,
"task_name": "mimic3-50",
"max_seq_length": 4096,
"train_file": "../data/mimic3/5/train_data_5_level_1_new_combined.csv",
"validation_file": "../data/mimic3/5/dev_data_5_level_1_new_combined.csv",
"test_file": "../data/mimic3/5/test_data_5_level_1_new_combined.csv",
"label_dictionary_file": "../data/mimic3/5/labels_dictionary_5_level_1.csv",
"ignore_keys_for_eval": ["preds", "label_attention_weights", "chunk_attention_weights"],
"use_cached_datasets": true,
"data_segmented": false,
"lazy_loading": false,
"d_model": 768,
"dropout": 0.1,
"dropout_att": 0.1,
"num_chunks_per_document": 1,
"transformer_layer_update_strategy": "all",
"use_code_representation": false,
"multi_head_attention": false,
"chunk_attention": false,
"multi_head_chunk_attention": false,
"linear_init_mean": 0.0,
"linear_init_std": 0.03,
"document_pooling_strategy": "mean",
"do_train": true,
"do_eval": true,
"do_predict": true,
"evaluation_strategy": "steps",
"per_device_train_batch_size": 4,
"per_device_eval_batch_size": 4,
"gradient_accumulation_steps": 2,
"learning_rate": 5e-5,
"weight_decay": 0.1,
"num_train_epochs": 100,
"max_steps": 10000,
"warmup_steps": 500,
"log_level": "error",
"logging_strategy": "steps",
"logging_steps": 500,
"save_strategy": "steps",
"save_steps": 500,
"seed": 2022,
"dataloader_drop_last": false,
"disable_tqdm": false,
"label_names": ["targets"],
"load_best_model_at_end": false,
"metric_for_best_model": "micro_f1",
"greater_is_better": true,
"remove_unused_columns": false,
"report_to": "none",
"num_hidden_layers": 12,
"resume_from_checkpoint": "C:/Users/mkanneganti/Downloads/new/model/checkpoint-10000- Long LAT 05"
}