Matyáš Boháček
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import logging
import pandas as pd
BODY_IDENTIFIERS = [
"nose",
"neck",
"rightEye",
"leftEye",
"rightEar",
"leftEar",
"rightShoulder",
"leftShoulder",
"rightElbow",
"leftElbow",
"rightWrist",
"leftWrist"
]
def normalize_body_full(df: pd.DataFrame) -> (pd.DataFrame, list):
"""
Normalizes the body position data using the Bohacek-normalization algorithm.
:param df: pd.DataFrame to be normalized
:return: pd.DataFrame with normalized values for body pose
"""
# TODO: Fix division by zero
normalized_df = pd.DataFrame(columns=df.columns)
invalid_row_indexes = []
body_landmarks = {"X": [], "Y": []}
# Construct the relevant identifiers
for identifier in BODY_IDENTIFIERS:
body_landmarks["X"].append(identifier + "_X")
body_landmarks["Y"].append(identifier + "_Y")
# Iterate over all of the records in the dataset
for index, row in df.iterrows():
sequence_size = len(row["leftEar_Y"])
valid_sequence = True
original_row = row
last_starting_point, last_ending_point = None, None
# Treat each element of the sequence (analyzed frame) individually
for sequence_index in range(sequence_size):
# Prevent from even starting the analysis if some necessary elements are not present
if (row["leftShoulder_X"][sequence_index] == 0 or row["rightShoulder_X"][sequence_index] == 0) and (row["neck_X"][sequence_index] == 0 or row["nose_X"][sequence_index] == 0):
if not last_starting_point:
valid_sequence = False
continue
else:
starting_point, ending_point = last_starting_point, last_ending_point
else:
# NOTE:
#
# While in the paper, it is written that the head metric is calculated by halving the shoulder distance,
# this is meant for the distance between the very ends of one's shoulder, as literature studying body
# metrics and ratios generally states. The Vision Pose Estimation API, however, seems to be predicting
# rather the center of one's shoulder. Based on our experiments and manual reviews of the data, employing
# this as just the plain shoulder distance seems to be more corresponding to the desired metric.
#
# Please, review this if using other third-party pose estimation libraries.
if row["leftShoulder_X"][sequence_index] != 0 and row["rightShoulder_X"][sequence_index] != 0:
left_shoulder = (row["leftShoulder_X"][sequence_index], row["leftShoulder_Y"][sequence_index])
right_shoulder = (row["rightShoulder_X"][sequence_index], row["rightShoulder_Y"][sequence_index])
shoulder_distance = ((((left_shoulder[0] - right_shoulder[0]) ** 2) + (
(left_shoulder[1] - right_shoulder[1]) ** 2)) ** 0.5)
head_metric = shoulder_distance
else:
neck = (row["neck_X"][sequence_index], row["neck_Y"][sequence_index])
nose = (row["nose_X"][sequence_index], row["nose_Y"][sequence_index])
neck_nose_distance = ((((neck[0] - nose[0]) ** 2) + ((neck[1] - nose[1]) ** 2)) ** 0.5)
head_metric = neck_nose_distance
# Set the starting and ending point of the normalization bounding box
starting_point = [row["neck_X"][sequence_index] - 3 * head_metric, row["leftEye_Y"][sequence_index] + (head_metric / 2)]
ending_point = [row["neck_X"][sequence_index] + 3 * head_metric, starting_point[1] - 6 * head_metric]
last_starting_point, last_ending_point = starting_point, ending_point
# Ensure that all of the bounding-box-defining coordinates are not out of the picture
if starting_point[0] < 0: starting_point[0] = 0
if starting_point[1] < 0: starting_point[1] = 0
if ending_point[0] < 0: ending_point[0] = 0
if ending_point[1] < 0: ending_point[1] = 0
# Normalize individual landmarks and save the results
for identifier in BODY_IDENTIFIERS:
key = identifier + "_"
# Prevent from trying to normalize incorrectly captured points
if row[key + "X"][sequence_index] == 0:
continue
normalized_x = (row[key + "X"][sequence_index] - starting_point[0]) / (ending_point[0] -
starting_point[0])
normalized_y = (row[key + "Y"][sequence_index] - ending_point[1]) / (starting_point[1] -
ending_point[1])
row[key + "X"][sequence_index] = normalized_x
row[key + "Y"][sequence_index] = normalized_y
if valid_sequence:
normalized_df = normalized_df.append(row, ignore_index=True)
else:
logging.warning(" BODY LANDMARKS: One video instance could not be normalized.")
normalized_df = normalized_df.append(original_row, ignore_index=True)
invalid_row_indexes.append(index)
print("The normalization of body is finished.")
print("\t-> Original size:", df.shape[0])
print("\t-> Normalized size:", normalized_df.shape[0])
print("\t-> Problematic videos:", len(invalid_row_indexes))
return normalized_df, invalid_row_indexes
def normalize_single_dict(row: dict):
"""
Normalizes the skeletal data for a given sequence of frames with signer's body pose data. The normalization follows
the definition from our paper.
:param row: Dictionary containing key-value pairs with joint identifiers and corresponding lists (sequences) of
that particular joints coordinates
:return: Dictionary with normalized skeletal data (following the same schema as input data)
"""
sequence_size = len(row["leftEar"])
valid_sequence = True
original_row = row
last_starting_point, last_ending_point = None, None
# Treat each element of the sequence (analyzed frame) individually
for sequence_index in range(sequence_size):
# Prevent from even starting the analysis if some necessary elements are not present
if (row["leftShoulder"][sequence_index][0] == 0 or row["rightShoulder"][sequence_index][0] == 0) and (
row["neck"][sequence_index][0] == 0 or row["nose"][sequence_index][0] == 0):
if not last_starting_point:
valid_sequence = False
continue
else:
starting_point, ending_point = last_starting_point, last_ending_point
else:
# NOTE:
#
# While in the paper, it is written that the head metric is calculated by halving the shoulder distance,
# this is meant for the distance between the very ends of one's shoulder, as literature studying body
# metrics and ratios generally states. The Vision Pose Estimation API, however, seems to be predicting
# rather the center of one's shoulder. Based on our experiments and manual reviews of the data, employing
# this as just the plain shoulder distance seems to be more corresponding to the desired metric.
#
# Please, review this if using other third-party pose estimation libraries.
if row["leftShoulder"][sequence_index][0] != 0 and row["rightShoulder"][sequence_index][0] != 0:
left_shoulder = (row["leftShoulder"][sequence_index][0], row["leftShoulder"][sequence_index][1])
right_shoulder = (row["rightShoulder"][sequence_index][0], row["rightShoulder"][sequence_index][1])
shoulder_distance = ((((left_shoulder[0] - right_shoulder[0]) ** 2) + (
(left_shoulder[1] - right_shoulder[1]) ** 2)) ** 0.5)
head_metric = shoulder_distance
else:
neck = (row["neck"][sequence_index][0], row["neck"][sequence_index][1])
nose = (row["nose"][sequence_index][0], row["nose"][sequence_index][1])
neck_nose_distance = ((((neck[0] - nose[0]) ** 2) + ((neck[1] - nose[1]) ** 2)) ** 0.5)
head_metric = neck_nose_distance
# Set the starting and ending point of the normalization bounding box
#starting_point = [row["neck"][sequence_index][0] - 3 * head_metric,
# row["leftEye"][sequence_index][1] + (head_metric / 2)]
starting_point = [row["neck"][sequence_index][0] - 1 * head_metric,
row["leftEye"][sequence_index][1] - head_metric/2]
ending_point = [row["neck"][sequence_index][0] + 1 * head_metric,
starting_point[1] + 3 * head_metric]
last_starting_point, last_ending_point = starting_point, ending_point
# Ensure that all of the bounding-box-defining coordinates are not out of the picture
if starting_point[0] < 0: starting_point[0] = 0
if starting_point[1] > 1: starting_point[1] = 1
if ending_point[0] < 0: ending_point[0] = 0
if ending_point[1] > 1: ending_point[1] = 1
# Normalize individual landmarks and save the results
for identifier in BODY_IDENTIFIERS:
key = identifier
# Prevent from trying to normalize incorrectly captured points
if row[key][sequence_index][0] == 0:
continue
if (ending_point[0] - starting_point[0]) == 0 or (starting_point[1] - ending_point[1]) == 0:
logging.info("Problematic normalization")
valid_sequence = False
break
normalized_x = (row[key][sequence_index][0] - starting_point[0]) / (ending_point[0] - starting_point[0])
normalized_y = (row[key][sequence_index][1] - starting_point[1]) / (ending_point[1] - starting_point[1])
row[key][sequence_index] = list(row[key][sequence_index])
row[key][sequence_index][0] = normalized_x
row[key][sequence_index][1] = normalized_y
if valid_sequence:
return row
else:
return original_row
if __name__ == "__main__":
pass