odor-detection / projects /group_detr /modeling /group_detr_transformer.py
mathiaszinnen's picture
Initialize app
3e99b05
# coding=utf-8
# Copyright 2022 The IDEA Authors. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import torch
import torch.nn as nn
from detrex.layers import (
FFN,
MLP,
BaseTransformerLayer,
ConditionalCrossAttention,
MultiheadAttention,
TransformerLayerSequence,
get_sine_pos_embed,
)
from .attention import GroupConditionalSelfAttention
class GroupDetrTransformerEncoder(TransformerLayerSequence):
def __init__(
self,
embed_dim: int = 256,
num_heads: int = 8,
attn_dropout: float = 0.1,
feedforward_dim: int = 2048,
ffn_dropout: float = 0.1,
activation: nn.Module = nn.PReLU(),
post_norm: bool = False,
num_layers: int = 6,
batch_first: bool = False,
):
super(GroupDetrTransformerEncoder, self).__init__(
transformer_layers=BaseTransformerLayer(
attn=MultiheadAttention(
embed_dim=embed_dim,
num_heads=num_heads,
attn_drop=attn_dropout,
batch_first=batch_first,
),
ffn=FFN(
embed_dim=embed_dim,
feedforward_dim=feedforward_dim,
ffn_drop=ffn_dropout,
activation=activation,
),
norm=nn.LayerNorm(normalized_shape=embed_dim),
operation_order=("self_attn", "norm", "ffn", "norm"),
),
num_layers=num_layers,
)
self.embed_dim = self.layers[0].embed_dim
self.pre_norm = self.layers[0].pre_norm
if post_norm:
self.post_norm_layer = nn.LayerNorm(self.embed_dim)
else:
self.post_norm_layer = None
def forward(
self,
query,
key,
value,
query_pos=None,
key_pos=None,
attn_masks=None,
query_key_padding_mask=None,
key_padding_mask=None,
**kwargs,
):
for layer in self.layers:
query = layer(
query,
key,
value,
query_pos=query_pos,
attn_masks=attn_masks,
query_key_padding_mask=query_key_padding_mask,
key_padding_mask=key_padding_mask,
**kwargs,
)
if self.post_norm_layer is not None:
query = self.post_norm_layer(query)
return query
class GroupDetrTransformerDecoder(TransformerLayerSequence):
def __init__(
self,
embed_dim: int = 256,
num_heads: int = 8,
attn_dropout: float = 0.0,
feedforward_dim: int = 2048,
ffn_dropout: float = 0.0,
activation: nn.Module = nn.PReLU(),
group_nums: int = 11,
num_layers: int = None,
batch_first: bool = False,
post_norm: bool = True,
return_intermediate: bool = True,
):
super(GroupDetrTransformerDecoder, self).__init__(
transformer_layers=BaseTransformerLayer(
attn=[
GroupConditionalSelfAttention(
embed_dim=embed_dim,
num_heads=num_heads,
attn_drop=attn_dropout,
group_nums=group_nums,
batch_first=batch_first,
),
ConditionalCrossAttention(
embed_dim=embed_dim,
num_heads=num_heads,
attn_drop=attn_dropout,
batch_first=batch_first,
),
],
ffn=FFN(
embed_dim=embed_dim,
feedforward_dim=feedforward_dim,
ffn_drop=ffn_dropout,
activation=activation,
),
norm=nn.LayerNorm(
normalized_shape=embed_dim,
),
operation_order=("self_attn", "norm", "cross_attn", "norm", "ffn", "norm"),
),
num_layers=num_layers,
)
self.return_intermediate = return_intermediate
self.embed_dim = self.layers[0].embed_dim
self.query_scale = MLP(self.embed_dim, self.embed_dim, self.embed_dim, 2)
self.ref_point_head = MLP(self.embed_dim, self.embed_dim, 2, 2)
self.bbox_embed = None
if post_norm:
self.post_norm_layer = nn.LayerNorm(self.embed_dim)
else:
self.post_norm_layer = None
for idx in range(num_layers - 1):
self.layers[idx + 1].attentions[1].query_pos_proj = None
def forward(
self,
query,
key,
value,
query_pos=None,
key_pos=None,
attn_masks=None,
query_key_padding_mask=None,
key_padding_mask=None,
**kwargs,
):
intermediate = []
reference_points_before_sigmoid = self.ref_point_head(
query_pos
) # [num_queries, batch_size, 2]
reference_points: torch.Tensor = reference_points_before_sigmoid.sigmoid().transpose(0, 1)
for idx, layer in enumerate(self.layers):
obj_center = reference_points[..., :2].transpose(0, 1) # [num_queries, batch_size, 2]
# do not apply transform in position in the first decoder layer
if idx == 0:
position_transform = 1
else:
position_transform = self.query_scale(query)
# get sine embedding for the query vector
query_sine_embed = get_sine_pos_embed(obj_center)
# apply position transform
query_sine_embed = query_sine_embed[..., : self.embed_dim] * position_transform
query: torch.Tensor = layer(
query,
key,
value,
query_pos=query_pos,
key_pos=key_pos,
query_sine_embed=query_sine_embed,
attn_masks=attn_masks,
query_key_padding_mask=query_key_padding_mask,
key_padding_mask=key_padding_mask,
is_first_layer=(idx == 0),
**kwargs,
)
if self.return_intermediate:
if self.post_norm_layer is not None:
intermediate.append(self.post_norm_layer(query))
else:
intermediate.append(query)
if self.post_norm_layer is not None:
query = self.post_norm_layer(query)
if self.return_intermediate:
intermediate.pop()
intermediate.append(query)
if self.return_intermediate:
return [
torch.stack(intermediate).transpose(1, 2),
reference_points,
]
return query.unsqueeze(0)
class GroupDetrTransformer(nn.Module):
def __init__(self, encoder=None, decoder=None):
super(GroupDetrTransformer, self).__init__()
self.encoder = encoder
self.decoder = decoder
self.embed_dim = self.encoder.embed_dim
self.init_weights()
def init_weights(self):
for p in self.parameters():
if p.dim() > 1:
nn.init.xavier_uniform_(p)
def forward(self, x, mask, query_embed, pos_embed):
bs, c, h, w = x.shape
x = x.view(bs, c, -1).permute(2, 0, 1)
pos_embed = pos_embed.view(bs, c, -1).permute(2, 0, 1)
query_embed = query_embed.unsqueeze(1).repeat(1, bs, 1)
mask = mask.view(bs, -1)
memory = self.encoder(
query=x,
key=None,
value=None,
query_pos=pos_embed,
query_key_padding_mask=mask,
)
target = torch.zeros_like(query_embed)
hidden_state, references = self.decoder(
query=target,
key=memory,
value=memory,
key_pos=pos_embed,
query_pos=query_embed,
)
return hidden_state, references