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Runtime error
Fanwang Meng
commited on
Commit
•
2e8a9f9
1
Parent(s):
2497be4
Refactor the logic of checking status
Browse files- app.py +44 -61
- requirements.txt +3 -1
app.py
CHANGED
@@ -166,14 +166,6 @@ with upload_column:
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# on_change=update_uploader_session_info,
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)
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if uploaded_file:
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# st.write(f"the uploaded file: {uploaded_file}")
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# when new file is uploaded is different from the previous one
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if st.session_state.uploaded_file != uploaded_file:
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st.session_state.uploaded_file_changed = True
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else:
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st.session_state.uploaded_file_changed = False
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st.session_state.uploaded_file = uploaded_file
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# when new file is the same as the previous one
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# else:
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# st.session_state.uploaded_file_changed = False
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@@ -232,60 +224,51 @@ st.write(
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# Generate predictions when the user uploads a file
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# if submit_job_button:
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#
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#
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#
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#
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# mol_features, info_df, results = generate_predictions(
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# input_fname=temp_file_path,
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# sep="\s+|\t+",
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# clf=classifiers_dict[classifier],
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# _models_dict=all_models,
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# sampling=resample_methods_dict[resampler],
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# time_per_mol=120,
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# mol_features=None,
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# info_df=None,
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# )
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# st.session_state.mol_features = mol_features
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# st.session_state.info_df = info_df
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# else:
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# mol_features, info_df, results = generate_predictions(
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# input_fname=None,
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# sep="\s+|\t+",
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# clf=classifiers_dict[classifier],
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# _models_dict=all_models,
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# sampling=resample_methods_dict[resampler],
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# time_per_mol=120,
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# mol_features=st.session_state.mol_features,
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# info_df=st.session_state.info_df,
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# )
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if submit_job_button and uploaded_file:
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temp_dir = tempfile.mkdtemp()
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# Create a temporary file path for the uploaded file
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temp_file_path = os.path.join(temp_dir, uploaded_file.name)
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# Save the uploaded file to the temporary file path
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with open(temp_file_path, "wb") as temp_file:
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temp_file.write(uploaded_file.read())
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mol_features, info_df, results = generate_predictions(
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input_fname=temp_file_path,
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sep="\s+|\t+",
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clf=classifiers_dict[classifier],
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_models_dict=all_models,
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sampling=resample_methods_dict[resampler],
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time_per_mol=120,
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mol_features=None,
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info_df=None,
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)
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# feture table
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with feature_column:
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# on_change=update_uploader_session_info,
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)
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# when new file is the same as the previous one
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# else:
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# st.session_state.uploaded_file_changed = False
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# Generate predictions when the user uploads a file
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# if submit_job_button:
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if submit_job_button:
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if uploaded_file:
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# st.write(f"the uploaded file: {uploaded_file}")
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# when new file is uploaded is different from thprevious one
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if st.session_state.uploaded_file != uploaded_file:
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st.session_state.uploaded_file_changed = True
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else:
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st.session_state.uploaded_file_changed = False
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st.session_state.uploaded_file = uploaded_file
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# when new file is uploaded
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# update_uploader_session_info()
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st.write(
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f"the state of uploaded file changed after checking: {st.session_state.uploaded_file_changed}"
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)
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if st.session_state.uploaded_file_changed:
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temp_dir = tempfile.mkdtemp()
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# Create a temporary file path for the uploaded file
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temp_file_path = os.path.join(temp_dir, uploaded_file.name)
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# Save the uploaded file to the temporary file path
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with open(temp_file_path, "wb") as temp_file:
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temp_file.write(uploaded_file.read())
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mol_features, info_df, results = generate_predictions(
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input_fname=temp_file_path,
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sep="\s+|\t+",
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clf=classifiers_dict[classifier],
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_models_dict=all_models,
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sampling=resample_methods_dict[resampler],
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time_per_mol=120,
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mol_features=None,
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info_df=None,
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)
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st.session_state.mol_features = mol_features
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st.session_state.info_df = info_df
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else:
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mol_features, info_df, results = generate_predictions(
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input_fname=None,
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sep="\s+|\t+",
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clf=classifiers_dict[classifier],
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_models_dict=all_models,
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sampling=resample_methods_dict[resampler],
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time_per_mol=120,
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mol_features=st.session_state.mol_features,
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info_df=st.session_state.info_df,
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)
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# feture table
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with feature_column:
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requirements.txt
CHANGED
@@ -1,6 +1,8 @@
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numpy==1.24.4
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scipy==1.10.1
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scikit-learn==0.24.2
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joblib==1.3.2
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pandas==2.0.3
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openpyxl==3.1.2
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setuptools==59.8.0
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numpy==1.24.4
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scipy==1.10.1
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# scikit-learn==0.24.2
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git+https://github.com/scikit-learn/scikit-learn@0.24.2
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joblib==1.3.2
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pandas==2.0.3
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openpyxl==3.1.2
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