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| # Solution | |
| import gradio as gr | |
| def calculate_GC(DNA): | |
| n_G = DNA.count('G') | |
| n_C = DNA.count('C') | |
| n_A = DNA.count('A') | |
| n_T = DNA.count('T') | |
| GC_content = (n_G+n_C)/(n_G+n_C+n_A+n_T) * 100 | |
| total_count = n_G+n_C+n_A+n_T | |
| return total_count,n_A, n_T, n_G, n_C, GC_content | |
| ## configure inputs/outputs | |
| input_module = gr.inputs.Textbox(label = "Enter your DNA sequence in the box:") | |
| set_out1 = gr.outputs.Textbox(label = "Total count, all bases:") | |
| set_out2 = gr.outputs.Textbox(label = "Adenine (A) count:") | |
| set_out3 = gr.outputs.Textbox(label = "Thymine (T) count:") | |
| set_out4 = gr.outputs.Textbox(label = "Guanine (G) count:") | |
| set_out5 = gr.outputs.Textbox(label = "Cytosine (C) count:") | |
| set_out6 = gr.outputs.Textbox(label = "%G~C content:") | |
| ### configure gradio, detailed can be found at https://www.gradio.app/docs/#i_slider | |
| interface = gr.Interface(fn=calculate_GC, | |
| inputs=input_module, | |
| outputs=[set_out1,set_out2,set_out3,set_out4,set_out5,set_out6], | |
| title="CSCI1020 Demo 1: Web Application for Genomics %G~C Content Calculator", | |
| description= "Click examples below for a quick demo", | |
| theme = 'huggingface', | |
| layout = 'vertical' | |
| ) | |
| interface.launch() |