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Update main.py description and usage instructions; remove unused image asset

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  1. assets/gpt4_ontology_hierarchy.png +0 -3
  2. main.py +18 -6
assets/gpt4_ontology_hierarchy.png DELETED

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main.py CHANGED
@@ -31,14 +31,27 @@ else:
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  gr.set_static_paths(["assets"])
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- description = """Upload a biomedical image and enter prompts (separated by commas) to detect specific features.
 
 
 
 
 
 
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- The model understands these prompts:
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- ![gpt4_ontology_hierarchy.png](file/assets/gpt4_ontology_hierarchy.png)
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- Above figure is from the [BiomedParse paper](https://arxiv.org/abs/2405.12971).
 
 
 
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- The model understands these types of biomedical images:
 
 
 
 
 
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  - [Computed Tomography (CT)](https://en.wikipedia.org/wiki/Computed_tomography)
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  - [Magnetic Resonance Imaging (MRI)](https://en.wikipedia.org/wiki/Magnetic_resonance_imaging)
@@ -50,7 +63,6 @@ The model understands these types of biomedical images:
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  - [Endoscopy](https://en.wikipedia.org/wiki/Endoscopy)
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  - [Optical Coherence Tomography (OCT)](https://en.wikipedia.org/wiki/Optical_coherence_tomography)
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- This Space is based on the [BiomedParse model](https://microsoft.github.io/BiomedParse/).
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  """
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  gr.set_static_paths(["assets"])
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+ description = """\
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+ This Space is based on the [BiomedParse model](https://microsoft.github.io/BiomedParse/).
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+
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+ BiomedParse is a model that can detect various targets like organs, diseases, and more
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+ in biomedical images. The biomedical images can be of different types like CT, MRI, X-ray, etc.
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+
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+ > Note: Don't use this model for medical diagnosis. Always consult a healthcare professional for medical advice.
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+ ## How to use this demo
 
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+ 1. Upload a biomedical image
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+ 2. Select the modality type
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+ 3. Select the targets you want to detect
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+ 4. Click on the 'Submit' button to see the prediction
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+ The model will highlight the detected targets in the image and show the targets that were not found below the image.
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+ Each target is represented by a different color.
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+ Each target comes with a p-value. A target whose p-value is below 0.05 is considered "not found".
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+ For more details, check out the paper [BiomedParse: a biomedical foundation model for image parsing of everything everywhere all at once](https://arxiv.org/abs/2405.12971).
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+
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+ ## Modality Types
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  - [Computed Tomography (CT)](https://en.wikipedia.org/wiki/Computed_tomography)
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  - [Magnetic Resonance Imaging (MRI)](https://en.wikipedia.org/wiki/Magnetic_resonance_imaging)
 
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  - [Endoscopy](https://en.wikipedia.org/wiki/Endoscopy)
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  - [Optical Coherence Tomography (OCT)](https://en.wikipedia.org/wiki/Optical_coherence_tomography)
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  """
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