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nnUNet_calvingfront_detection / nnunet /utilities /recursive_delete_npz.py
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# Copyright 2020 Division of Medical Image Computing, German Cancer Research Center (DKFZ), Heidelberg, Germany
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from batchgenerators.utilities.file_and_folder_operations import *
import argparse
import os
def recursive_delete_npz(current_directory: str):
npz_files = subfiles(current_directory, join=True, suffix=".npz")
npz_files = [i for i in npz_files if not i.endswith("segFromPrevStage.npz")] # to be extra safe
_ = [os.remove(i) for i in npz_files]
for d in subdirs(current_directory, join=False):
if d != "pred_next_stage":
recursive_delete_npz(join(current_directory, d))
if __name__ == "__main__":
parser = argparse.ArgumentParser(usage="USE THIS RESPONSIBLY! DANGEROUS! I (Fabian) use this to remove npz files "
"after I ran figure_out_what_to_submit")
parser.add_argument("-f", help="folder", required=True)
args = parser.parse_args()
recursive_delete_npz(args.f)