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fuxialexander commited on
Commit
47fe139
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1 Parent(s): 09247c2

update docker

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Files changed (2) hide show
  1. Dockerfile +1 -1
  2. modules/atac_rna_data_processing +1 -1
Dockerfile CHANGED
@@ -6,7 +6,7 @@ WORKDIR /app
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  # Create a new environment using mamba with specified packages
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- RUN micromamba install -n base -c conda-forge -c bioconda -y python=3.10 pip biopython pygraphviz
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  RUN micromamba install -n base -c conda-forge -c bioconda -y nglview tqdm matplotlib pandas
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  RUN micromamba install -n base -c conda-forge -c bioconda -y openpyxl pyarrow python-box xmlschema seaborn numpy py3Dmol pyranges scipy pyyaml zarr numcodecs
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  RUN micromamba install -n base -c conda-forge -c bioconda -y pybigwig networkx plotly pysam requests seqlogo MOODS urllib3 pyliftover gprofiler-official pyfaidx
 
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  # Create a new environment using mamba with specified packages
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+ RUN micromamba install -n base -c conda-forge -c bioconda -y python=3.10 pip biopython
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  RUN micromamba install -n base -c conda-forge -c bioconda -y nglview tqdm matplotlib pandas
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  RUN micromamba install -n base -c conda-forge -c bioconda -y openpyxl pyarrow python-box xmlschema seaborn numpy py3Dmol pyranges scipy pyyaml zarr numcodecs
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  RUN micromamba install -n base -c conda-forge -c bioconda -y pybigwig networkx plotly pysam requests seqlogo MOODS urllib3 pyliftover gprofiler-official pyfaidx
modules/atac_rna_data_processing CHANGED
@@ -1 +1 @@
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- Subproject commit 6c4a15866b44cff3896b916399ab3a35511616ce
 
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+ Subproject commit 3b3aa98cbb86c9161886afb0f423e687a06d73ec