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| # | |
| # Pyserini: Python interface to the Anserini IR toolkit built on Lucene | |
| # | |
| # Licensed under the Apache License, Version 2.0 (the "License"); | |
| # you may not use this file except in compliance with the License. | |
| # You may obtain a copy of the License at | |
| # | |
| # http://www.apache.org/licenses/LICENSE-2.0 | |
| # | |
| # Unless required by applicable law or agreed to in writing, software | |
| # distributed under the License is distributed on an "AS IS" BASIS, | |
| # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. | |
| # See the License for the specific language governing permissions and | |
| # limitations under the License. | |
| # | |
| """Filter a TREC run file to retain only docids that appear on a list of valid docids (commonly known as a whitelist). | |
| The whitelist is a file with a docid on each line.""" | |
| import argparse | |
| from collections import defaultdict | |
| def read_file(file): | |
| docids = set() | |
| with open(file) as f: | |
| for line in f: | |
| cols = line.split() | |
| if len(cols) > 0: | |
| docids.add(cols[0]) | |
| return docids | |
| def main(): | |
| parser = argparse.ArgumentParser(description=__doc__, | |
| formatter_class=lambda prog: argparse.HelpFormatter(prog, width=100)) | |
| parser.add_argument('--whitelist', metavar='FILE', type=str, help='Whitelist (one docid per line).', required=True) | |
| parser.add_argument('--input', metavar='FILE', type=str, help='Input run.', required=True) | |
| parser.add_argument('--output', metavar='FILE', type=str, help='Output run.', required=True) | |
| parser.add_argument('--runtag', metavar='STRING', type=str, default=None, help='Runtag.') | |
| parser.add_argument('--k', metavar='NUM', type=int, default=1000, help='Number of hits to retain per topic.') | |
| args = parser.parse_args() | |
| docids = read_file(args.whitelist) | |
| print(f'Read {len(docids)} docids from {args.whitelist}') | |
| counts = defaultdict(int) | |
| prev_score = None | |
| check_score = True | |
| with open(args.output, 'w') as output_f: | |
| with open(args.input) as input_f: | |
| for line in input_f: | |
| cols = line.split() | |
| qid = cols[0] | |
| docid = cols[2] | |
| score = float(cols[4]) | |
| tag = cols[5] | |
| if args.runtag: | |
| tag = args.runtag | |
| if counts[qid] >= args.k: | |
| if check_score: | |
| if score <= prev_score: | |
| print(f'Warning: scores of {qid} do not strictly decrease at {docid}') | |
| check_score = False | |
| continue | |
| else: | |
| continue | |
| if docid in docids: | |
| counts[qid] += 1 | |
| prev_score = float(cols[4]) | |
| check_score = True | |
| output_f.write(f'{qid} Q0 {docid} {counts[qid]} {score} {tag}\n') | |
| if __name__ == '__main__': | |
| main() | |