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# YOLOv5 🚀 by Ultralytics, GPL-3.0 license
"""
Validate a trained YOLOv5 segment model on a segment dataset
Usage:
$ bash data/scripts/get_coco.sh --val --segments # download COCO-segments val split (1G, 5000 images)
$ python segment/val.py --weights yolov5s-seg.pt --data coco.yaml --img 640 # validate COCO-segments
Usage - formats:
$ python segment/val.py --weights yolov5s-seg.pt # PyTorch
yolov5s-seg.torchscript # TorchScript
yolov5s-seg.onnx # ONNX Runtime or OpenCV DNN with --dnn
yolov5s-seg_openvino_label # OpenVINO
yolov5s-seg.engine # TensorRT
yolov5s-seg.mlmodel # CoreML (macOS-only)
yolov5s-seg_saved_model # TensorFlow SavedModel
yolov5s-seg.pb # TensorFlow GraphDef
yolov5s-seg.tflite # TensorFlow Lite
yolov5s-seg_edgetpu.tflite # TensorFlow Edge TPU
yolov5s-seg_paddle_model # PaddlePaddle
"""
import argparse
import json
import os
import subprocess
import sys
from multiprocessing.pool import ThreadPool
from pathlib import Path
import numpy as np
import torch
from tqdm import tqdm
FILE = Path(__file__).resolve()
ROOT = FILE.parents[1] # YOLOv5 root directory
if str(ROOT) not in sys.path:
sys.path.append(str(ROOT)) # add ROOT to PATH
ROOT = Path(os.path.relpath(ROOT, Path.cwd())) # relative
import torch.nn.functional as F
from models.common import DetectMultiBackend
from models.yolo import SegmentationModel
from utils.callbacks import Callbacks
from utils.general import (LOGGER, NUM_THREADS, TQDM_BAR_FORMAT, Profile, check_dataset, check_img_size,
check_requirements, check_yaml, coco80_to_coco91_class, colorstr, increment_path,
non_max_suppression, print_args, scale_boxes, xywh2xyxy, xyxy2xywh)
from utils.metrics import ConfusionMatrix, box_iou
from utils.plots import output_to_target, plot_val_study
from utils.segment.dataloaders import create_dataloader
from utils.segment.general import mask_iou, process_mask, process_mask_native, scale_image
from utils.segment.metrics import Metrics, ap_per_class_box_and_mask
from utils.segment.plots import plot_images_and_masks
from utils.torch_utils import de_parallel, select_device, smart_inference_mode
def save_one_txt(predn, save_conf, shape, file):
# Save one txt result
gn = torch.tensor(shape)[[1, 0, 1, 0]] # normalization gain whwh
for *xyxy, conf, cls in predn.tolist():
xywh = (xyxy2xywh(torch.tensor(xyxy).view(1, 4)) / gn).view(-1).tolist() # normalized xywh
line = (cls, *xywh, conf) if save_conf else (cls, *xywh) # label format
with open(file, 'a') as f:
f.write(('%g ' * len(line)).rstrip() % line + '\n')
def save_one_json(predn, jdict, path, class_map, pred_masks):
# Save one JSON result {"image_id": 42, "category_id": 18, "bbox": [258.15, 41.29, 348.26, 243.78], "score": 0.236}
from pycocotools.mask import encode
def single_encode(x):
rle = encode(np.asarray(x[:, :, None], order='F', dtype='uint8'))[0]
rle['counts'] = rle['counts'].decode('utf-8')
return rle
image_id = int(path.stem) if path.stem.isnumeric() else path.stem
box = xyxy2xywh(predn[:, :4]) # xywh
box[:, :2] -= box[:, 2:] / 2 # xy center to top-left corner
pred_masks = np.transpose(pred_masks, (2, 0, 1))
with ThreadPool(NUM_THREADS) as pool:
rles = pool.map(single_encode, pred_masks)
for i, (p, b) in enumerate(zip(predn.tolist(), box.tolist())):
jdict.append({
'image_id': image_id,
'category_id': class_map[int(p[5])],
'bbox': [round(x, 3) for x in b],
'score': round(p[4], 5),
'segmentation': rles[i]})
def process_batch(detections, labels, iouv, pred_masks=None, gt_masks=None, overlap=False, masks=False):
"""
Return correct prediction matrix
Arguments:
detections (array[N, 6]), x1, y1, x2, y2, conf, class
labels (array[M, 5]), class, x1, y1, x2, y2
Returns:
correct (array[N, 10]), for 10 IoU levels
"""
if masks:
if overlap:
nl = len(labels)
index = torch.arange(nl, device=gt_masks.device).view(nl, 1, 1) + 1
gt_masks = gt_masks.repeat(nl, 1, 1) # shape(1,640,640) -> (n,640,640)
gt_masks = torch.where(gt_masks == index, 1.0, 0.0)
if gt_masks.shape[1:] != pred_masks.shape[1:]:
gt_masks = F.interpolate(gt_masks[None], pred_masks.shape[1:], mode='bilinear', align_corners=False)[0]
gt_masks = gt_masks.gt_(0.5)
iou = mask_iou(gt_masks.view(gt_masks.shape[0], -1), pred_masks.view(pred_masks.shape[0], -1))
else: # boxes
iou = box_iou(labels[:, 1:], detections[:, :4])
correct = np.zeros((detections.shape[0], iouv.shape[0])).astype(bool)
correct_class = labels[:, 0:1] == detections[:, 5]
for i in range(len(iouv)):
x = torch.where((iou >= iouv[i]) & correct_class) # IoU > threshold and classes match
if x[0].shape[0]:
matches = torch.cat((torch.stack(x, 1), iou[x[0], x[1]][:, None]), 1).cpu().numpy() # [label, detect, iou]
if x[0].shape[0] > 1:
matches = matches[matches[:, 2].argsort()[::-1]]
matches = matches[np.unique(matches[:, 1], return_index=True)[1]]
# matches = matches[matches[:, 2].argsort()[::-1]]
matches = matches[np.unique(matches[:, 0], return_index=True)[1]]
correct[matches[:, 1].astype(int), i] = True
return torch.tensor(correct, dtype=torch.bool, device=iouv.device)
@smart_inference_mode()
def run(
data,
weights=None, # model.pt path(s)
batch_size=32, # batch size
imgsz=640, # inference size (pixels)
conf_thres=0.001, # confidence threshold
iou_thres=0.6, # NMS IoU threshold
max_det=300, # maximum detections per image
task='val', # train, val, test, speed or study
device='', # cuda device, i.e. 0 or 0,1,2,3 or cpu
workers=8, # max dataloader workers (per RANK in DDP mode)
single_cls=False, # treat as single-class dataset
augment=False, # augmented inference
verbose=False, # verbose output
save_txt=False, # save results to *.txt
save_hybrid=False, # save label+prediction hybrid results to *.txt
save_conf=False, # save confidences in --save-txt labels
save_json=False, # save a COCO-JSON results file
project=ROOT / 'runs/val-seg', # save to project/name
name='exp', # save to project/name
exist_ok=False, # existing project/name ok, do not increment
half=True, # use FP16 half-precision inference
dnn=False, # use OpenCV DNN for ONNX inference
model=None,
dataloader=None,
save_dir=Path(''),
plots=True,
overlap=False,
mask_downsample_ratio=1,
compute_loss=None,
callbacks=Callbacks(),
):
if save_json:
check_requirements('pycocotools>=2.0.6')
process = process_mask_native # more accurate
else:
process = process_mask # faster
# Initialize/load model and set device
training = model is not None
if training: # called by train.py
device, pt, jit, engine = next(model.parameters()).device, True, False, False # get model device, PyTorch model
half &= device.type != 'cpu' # half precision only supported on CUDA
model.half() if half else model.float()
nm = de_parallel(model).model[-1].nm # number of masks
else: # called directly
device = select_device(device, batch_size=batch_size)
# Directories
save_dir = increment_path(Path(project) / name, exist_ok=exist_ok) # increment run
(save_dir / 'labels' if save_txt else save_dir).mkdir(parents=True, exist_ok=True) # make dir
# Load model
model = DetectMultiBackend(weights, device=device, dnn=dnn, data=data, fp16=half)
stride, pt, jit, engine = model.stride, model.pt, model.jit, model.engine
imgsz = check_img_size(imgsz, s=stride) # check image size
half = model.fp16 # FP16 supported on limited backends with CUDA
nm = de_parallel(model).model.model[-1].nm if isinstance(model, SegmentationModel) else 32 # number of masks
if engine:
batch_size = model.batch_size
else:
device = model.device
if not (pt or jit):
batch_size = 1 # export.py models default to batch-size 1
LOGGER.info(f'Forcing --batch-size 1 square inference (1,3,{imgsz},{imgsz}) for non-PyTorch models')
# Data
data = check_dataset(data) # check
# Configure
model.eval()
cuda = device.type != 'cpu'
is_coco = isinstance(data.get('val'), str) and data['val'].endswith(f'coco{os.sep}val2017.txt') # COCO dataset
nc = 1 if single_cls else int(data['nc']) # number of classes
iouv = torch.linspace(0.5, 0.95, 10, device=device) # iou vector for mAP@0.5:0.95
niou = iouv.numel()
# Dataloader
if not training:
if pt and not single_cls: # check --weights are trained on --data
ncm = model.model.nc
assert ncm == nc, f'{weights} ({ncm} classes) trained on different --data than what you passed ({nc} ' \
f'classes). Pass correct combination of --weights and --data that are trained together.'
model.warmup(imgsz=(1 if pt else batch_size, 3, imgsz, imgsz)) # warmup
pad, rect = (0.0, False) if task == 'speed' else (0.5, pt) # square inference for benchmarks
task = task if task in ('train', 'val', 'test') else 'val' # path to train/val/test images
dataloader = create_dataloader(data[task],
imgsz,
batch_size,
stride,
single_cls,
pad=pad,
rect=rect,
workers=workers,
prefix=colorstr(f'{task}: '),
overlap_mask=overlap,
mask_downsample_ratio=mask_downsample_ratio)[0]
seen = 0
confusion_matrix = ConfusionMatrix(nc=nc)
names = model.names if hasattr(model, 'names') else model.module.names # get class names
if isinstance(names, (list, tuple)): # old format
names = dict(enumerate(names))
class_map = coco80_to_coco91_class() if is_coco else list(range(1000))
s = ('%22s' + '%11s' * 10) % ('Class', 'Images', 'Instances', 'Box(P', 'R', 'mAP50', 'mAP50-95)', 'Mask(P', 'R',
'mAP50', 'mAP50-95)')
dt = Profile(), Profile(), Profile()
metrics = Metrics()
loss = torch.zeros(4, device=device)
jdict, stats = [], []
# callbacks.run('on_val_start')
pbar = tqdm(dataloader, desc=s, bar_format=TQDM_BAR_FORMAT) # progress bar
for batch_i, (im, targets, paths, shapes, masks) in enumerate(pbar):
# callbacks.run('on_val_batch_start')
with dt[0]:
if cuda:
im = im.to(device, non_blocking=True)
targets = targets.to(device)
masks = masks.to(device)
masks = masks.float()
im = im.half() if half else im.float() # uint8 to fp16/32
im /= 255 # 0 - 255 to 0.0 - 1.0
nb, _, height, width = im.shape # batch size, channels, height, width
# Inference
with dt[1]:
preds, protos, train_out = model(im) if compute_loss else (*model(im, augment=augment)[:2], None)
# Loss
if compute_loss:
loss += compute_loss((train_out, protos), targets, masks)[1] # box, obj, cls
# NMS
targets[:, 2:] *= torch.tensor((width, height, width, height), device=device) # to pixels
lb = [targets[targets[:, 0] == i, 1:] for i in range(nb)] if save_hybrid else [] # for autolabelling
with dt[2]:
preds = non_max_suppression(preds,
conf_thres,
iou_thres,
labels=lb,
multi_label=True,
agnostic=single_cls,
max_det=max_det,
nm=nm)
# Metrics
plot_masks = [] # masks for plotting
for si, (pred, proto) in enumerate(zip(preds, protos)):
labels = targets[targets[:, 0] == si, 1:]
nl, npr = labels.shape[0], pred.shape[0] # number of labels, predictions
path, shape = Path(paths[si]), shapes[si][0]
correct_masks = torch.zeros(npr, niou, dtype=torch.bool, device=device) # init
correct_bboxes = torch.zeros(npr, niou, dtype=torch.bool, device=device) # init
seen += 1
if npr == 0:
if nl:
stats.append((correct_masks, correct_bboxes, *torch.zeros((2, 0), device=device), labels[:, 0]))
if plots:
confusion_matrix.process_batch(detections=None, labels=labels[:, 0])
continue
# Masks
midx = [si] if overlap else targets[:, 0] == si
gt_masks = masks[midx]
pred_masks = process(proto, pred[:, 6:], pred[:, :4], shape=im[si].shape[1:])
# Predictions
if single_cls:
pred[:, 5] = 0
predn = pred.clone()
scale_boxes(im[si].shape[1:], predn[:, :4], shape, shapes[si][1]) # native-space pred
# Evaluate
if nl:
tbox = xywh2xyxy(labels[:, 1:5]) # target boxes
scale_boxes(im[si].shape[1:], tbox, shape, shapes[si][1]) # native-space labels
labelsn = torch.cat((labels[:, 0:1], tbox), 1) # native-space labels
correct_bboxes = process_batch(predn, labelsn, iouv)
correct_masks = process_batch(predn, labelsn, iouv, pred_masks, gt_masks, overlap=overlap, masks=True)
if plots:
confusion_matrix.process_batch(predn, labelsn)
stats.append((correct_masks, correct_bboxes, pred[:, 4], pred[:, 5], labels[:, 0])) # (conf, pcls, tcls)
pred_masks = torch.as_tensor(pred_masks, dtype=torch.uint8)
if plots and batch_i < 3:
plot_masks.append(pred_masks[:15]) # filter top 15 to plot
# Save/log
if save_txt:
save_one_txt(predn, save_conf, shape, file=save_dir / 'labels' / f'{path.stem}.txt')
if save_json:
pred_masks = scale_image(im[si].shape[1:],
pred_masks.permute(1, 2, 0).contiguous().cpu().numpy(), shape, shapes[si][1])
save_one_json(predn, jdict, path, class_map, pred_masks) # append to COCO-JSON dictionary
# callbacks.run('on_val_image_end', pred, predn, path, names, im[si])
# Plot images
if plots and batch_i < 3:
if len(plot_masks):
plot_masks = torch.cat(plot_masks, dim=0)
plot_images_and_masks(im, targets, masks, paths, save_dir / f'val_batch{batch_i}_labels.jpg', names)
plot_images_and_masks(im, output_to_target(preds, max_det=15), plot_masks, paths,
save_dir / f'val_batch{batch_i}_pred.jpg', names) # pred
# callbacks.run('on_val_batch_end')
# Compute metrics
stats = [torch.cat(x, 0).cpu().numpy() for x in zip(*stats)] # to numpy
if len(stats) and stats[0].any():
results = ap_per_class_box_and_mask(*stats, plot=plots, save_dir=save_dir, names=names)
metrics.update(results)
nt = np.bincount(stats[4].astype(int), minlength=nc) # number of targets per class
# Print results
pf = '%22s' + '%11i' * 2 + '%11.3g' * 8 # print format
LOGGER.info(pf % ('all', seen, nt.sum(), *metrics.mean_results()))
if nt.sum() == 0:
LOGGER.warning(f'WARNING ⚠️ no labels found in {task} set, can not compute metrics without labels')
# Print results per class
if (verbose or (nc < 50 and not training)) and nc > 1 and len(stats):
for i, c in enumerate(metrics.ap_class_index):
LOGGER.info(pf % (names[c], seen, nt[c], *metrics.class_result(i)))
# Print speeds
t = tuple(x.t / seen * 1E3 for x in dt) # speeds per image
if not training:
shape = (batch_size, 3, imgsz, imgsz)
LOGGER.info(f'Speed: %.1fms pre-process, %.1fms inference, %.1fms NMS per image at shape {shape}' % t)
# Plots
if plots:
confusion_matrix.plot(save_dir=save_dir, names=list(names.values()))
# callbacks.run('on_val_end')
mp_bbox, mr_bbox, map50_bbox, map_bbox, mp_mask, mr_mask, map50_mask, map_mask = metrics.mean_results()
# Save JSON
if save_json and len(jdict):
w = Path(weights[0] if isinstance(weights, list) else weights).stem if weights is not None else '' # weights
anno_json = str(Path('../datasets/coco/annotations/instances_val2017.json')) # annotations
pred_json = str(save_dir / f'{w}_predictions.json') # predictions
LOGGER.info(f'\nEvaluating pycocotools mAP... saving {pred_json}...')
with open(pred_json, 'w') as f:
json.dump(jdict, f)
try: # https://github.com/cocodataset/cocoapi/blob/master/PythonAPI/pycocoEvalDemo.ipynb
from pycocotools.coco import COCO
from pycocotools.cocoeval import COCOeval
anno = COCO(anno_json) # init annotations api
pred = anno.loadRes(pred_json) # init predictions api
results = []
for eval in COCOeval(anno, pred, 'bbox'), COCOeval(anno, pred, 'segm'):
if is_coco:
eval.params.imgIds = [int(Path(x).stem) for x in dataloader.dataset.im_files] # img ID to evaluate
eval.evaluate()
eval.accumulate()
eval.summarize()
results.extend(eval.stats[:2]) # update results (mAP@0.5:0.95, mAP@0.5)
map_bbox, map50_bbox, map_mask, map50_mask = results
except Exception as e:
LOGGER.info(f'pycocotools unable to run: {e}')
# Return results
model.float() # for training
if not training:
s = f"\n{len(list(save_dir.glob('labels/*.txt')))} labels saved to {save_dir / 'labels'}" if save_txt else ''
LOGGER.info(f"Results saved to {colorstr('bold', save_dir)}{s}")
final_metric = mp_bbox, mr_bbox, map50_bbox, map_bbox, mp_mask, mr_mask, map50_mask, map_mask
return (*final_metric, *(loss.cpu() / len(dataloader)).tolist()), metrics.get_maps(nc), t
def parse_opt():
parser = argparse.ArgumentParser()
parser.add_argument('--data', type=str, default=ROOT / 'data/coco128-seg.yaml', help='dataset.yaml path')
parser.add_argument('--weights', nargs='+', type=str, default=ROOT / 'yolov5s-seg.pt', help='model path(s)')
parser.add_argument('--batch-size', type=int, default=32, help='batch size')
parser.add_argument('--imgsz', '--img', '--img-size', type=int, default=640, help='inference size (pixels)')
parser.add_argument('--conf-thres', type=float, default=0.001, help='confidence threshold')
parser.add_argument('--iou-thres', type=float, default=0.6, help='NMS IoU threshold')
parser.add_argument('--max-det', type=int, default=300, help='maximum detections per image')
parser.add_argument('--task', default='val', help='train, val, test, speed or study')
parser.add_argument('--device', default='', help='cuda device, i.e. 0 or 0,1,2,3 or cpu')
parser.add_argument('--workers', type=int, default=8, help='max dataloader workers (per RANK in DDP mode)')
parser.add_argument('--single-cls', action='store_true', help='treat as single-class dataset')
parser.add_argument('--augment', action='store_true', help='augmented inference')
parser.add_argument('--verbose', action='store_true', help='report mAP by class')
parser.add_argument('--save-txt', action='store_true', help='save results to *.txt')
parser.add_argument('--save-hybrid', action='store_true', help='save label+prediction hybrid results to *.txt')
parser.add_argument('--save-conf', action='store_true', help='save confidences in --save-txt labels')
parser.add_argument('--save-json', action='store_true', help='save a COCO-JSON results file')
parser.add_argument('--project', default=ROOT / 'runs/val-seg', help='save results to project/name')
parser.add_argument('--name', default='exp', help='save to project/name')
parser.add_argument('--exist-ok', action='store_true', help='existing project/name ok, do not increment')
parser.add_argument('--half', action='store_true', help='use FP16 half-precision inference')
parser.add_argument('--dnn', action='store_true', help='use OpenCV DNN for ONNX inference')
opt = parser.parse_args()
opt.data = check_yaml(opt.data) # check YAML
# opt.save_json |= opt.data.endswith('coco.yaml')
opt.save_txt |= opt.save_hybrid
print_args(vars(opt))
return opt
def main(opt):
check_requirements(requirements=ROOT / 'requirements.txt', exclude=('tensorboard', 'thop'))
if opt.task in ('train', 'val', 'test'): # run normally
if opt.conf_thres > 0.001: # https://github.com/ultralytics/yolov5/issues/1466
LOGGER.warning(f'WARNING ⚠️ confidence threshold {opt.conf_thres} > 0.001 produces invalid results')
if opt.save_hybrid:
LOGGER.warning('WARNING ⚠️ --save-hybrid returns high mAP from hybrid labels, not from predictions alone')
run(**vars(opt))
else:
weights = opt.weights if isinstance(opt.weights, list) else [opt.weights]
opt.half = torch.cuda.is_available() and opt.device != 'cpu' # FP16 for fastest results
if opt.task == 'speed': # speed benchmarks
# python val.py --task speed --data coco.yaml --batch 1 --weights yolov5n.pt yolov5s.pt...
opt.conf_thres, opt.iou_thres, opt.save_json = 0.25, 0.45, False
for opt.weights in weights:
run(**vars(opt), plots=False)
elif opt.task == 'study': # speed vs mAP benchmarks
# python val.py --task study --data coco.yaml --iou 0.7 --weights yolov5n.pt yolov5s.pt...
for opt.weights in weights:
f = f'study_{Path(opt.data).stem}_{Path(opt.weights).stem}.txt' # filename to save to
x, y = list(range(256, 1536 + 128, 128)), [] # x axis (image sizes), y axis
for opt.imgsz in x: # img-size
LOGGER.info(f'\nRunning {f} --imgsz {opt.imgsz}...')
r, _, t = run(**vars(opt), plots=False)
y.append(r + t) # results and times
np.savetxt(f, y, fmt='%10.4g') # save
subprocess.run(['zip', '-r', 'study.zip', 'study_*.txt'])
plot_val_study(x=x) # plot
else:
raise NotImplementedError(f'--task {opt.task} not in ("train", "val", "test", "speed", "study")')
if __name__ == '__main__':
opt = parse_opt()
main(opt)