erichilarysmithsr's picture
Duplicate from merle/PROTEIN_GENERATOR
c145e8a
{"F": 1, "T": 25, "aa_composition": "", "aa_spec": null, "aa_weight": null, "aa_weights_json": null, "add_weight_every_n": 1, "argmax_seq": false, "cautious": false, "checkpoint": "./SEQDIFF_230205_dssp_hotspots_25mask_EQtasks_mod30.pt", "clamp_seqout": false, "contigs": ["0"], "d_t1d": 29, "dssp_pdb": null, "dump_all": false, "dump_npz": false, "dump_pdb": true, "dump_trb": true, "frac_seq_to_weight": 0.0, "hal_idx": null, "helix_bias": 0.0, "hotspots": null, "idx_rf": null, "inpaint_seq": null, "inpaint_seq_tensor": null, "inpaint_str": null, "inpaint_str_tensor": null, "input_json": null, "length": null, "loop_bias": 0.0, "loop_design": false, "min_decoding_distance": 15, "multi_templates": null, "multi_tmpl_conf": null, "n_cycle": 4, "noise_schedule": "sqrt", "num_designs": 500, "one_weight_per_position": false, "out": "./tmp/", "pdb": null, "potential_scale": null, "ref_idx": null, "sampling_temp": 1.0, "save_all_steps": false, "save_best_plddt": true, "save_seqs": false, "scheduled_str_cond": false, "secondary_structure": null, "softmax_seqout": false, "start_num": 0, "strand_bias": 0.01, "struc_cond_sc": false, "symmetry": 1, "symmetry_cap": 0, "temperature": 1.0, "tmpl_conf": "1", "trb": null, "sequence": "", "save_args": true, "potentials": null, "target_charge": -10, "charge_loss_type": "complex", "target_pH": 7.4, "hydrophobic_score": -10, "hydrophobic_loss_type": "complex", "sample_distribution": "normal", "sample_distribution_gmm_means": [-1, 1], "sample_distribution_gmm_variances": [1, 1], "gradio": true}