lib

diffusion_utilities.py

@@ -0,0 +1,250 @@
+import torch
+import torch.nn as nn
+import numpy as np
+from torchvision.utils import save_image, make_grid
+import matplotlib.pyplot as plt
+from matplotlib.animation import FuncAnimation, PillowWriter
+import os
+import torchvision.transforms as transforms
+from torch.utils.data import Dataset
+from PIL import Image
+
+
+class ResidualConvBlock(nn.Module):
+    def __init__(
+        self, in_channels: int, out_channels: int, is_res: bool = False
+    ) -> None:
+        super().__init__()
+
+        # Check if input and output channels are the same for the residual connection
+        self.same_channels = in_channels == out_channels
+
+        # Flag for whether or not to use residual connection
+        self.is_res = is_res
+
+        # First convolutional layer
+        self.conv1 = nn.Sequential(
+            nn.Conv2d(in_channels, out_channels, 3, 1, 1),   # 3x3 kernel with stride 1 and padding 1
+            nn.BatchNorm2d(out_channels),   # Batch normalization
+            nn.GELU(),   # GELU activation function
+        )
+
+        # Second convolutional layer
+        self.conv2 = nn.Sequential(
+            nn.Conv2d(out_channels, out_channels, 3, 1, 1),   # 3x3 kernel with stride 1 and padding 1
+            nn.BatchNorm2d(out_channels),   # Batch normalization
+            nn.GELU(),   # GELU activation function
+        )
+
+    def forward(self, x: torch.Tensor) -> torch.Tensor:
+
+        # If using residual connection
+        if self.is_res:
+            # Apply first convolutional layer
+            x1 = self.conv1(x)
+
+            # Apply second convolutional layer
+            x2 = self.conv2(x1)
+
+            # If input and output channels are the same, add residual connection directly
+            if self.same_channels:
+                out = x + x2
+            else:
+                # If not, apply a 1x1 convolutional layer to match dimensions before adding residual connection
+                shortcut = nn.Conv2d(x.shape[1], x2.shape[1], kernel_size=1, stride=1, padding=0).to(x.device)
+                out = shortcut(x) + x2
+            #print(f"resconv forward: x {x.shape}, x1 {x1.shape}, x2 {x2.shape}, out {out.shape}")
+
+            # Normalize output tensor
+            return out / 1.414
+
+        # If not using residual connection, return output of second convolutional layer
+        else:
+            x1 = self.conv1(x)
+            x2 = self.conv2(x1)
+            return x2
+
+    # Method to get the number of output channels for this block
+    def get_out_channels(self):
+        return self.conv2[0].out_channels
+
+    # Method to set the number of output channels for this block
+    def set_out_channels(self, out_channels):
+        self.conv1[0].out_channels = out_channels
+        self.conv2[0].in_channels = out_channels
+        self.conv2[0].out_channels = out_channels
+
+        
+
+class UnetUp(nn.Module):
+    def __init__(self, in_channels, out_channels):
+        super(UnetUp, self).__init__()
+        
+        # Create a list of layers for the upsampling block
+        # The block consists of a ConvTranspose2d layer for upsampling, followed by two ResidualConvBlock layers
+        layers = [
+            nn.ConvTranspose2d(in_channels, out_channels, 2, 2),
+            ResidualConvBlock(out_channels, out_channels),
+            ResidualConvBlock(out_channels, out_channels),
+        ]
+        
+        # Use the layers to create a sequential model
+        self.model = nn.Sequential(*layers)
+
+    def forward(self, x, skip):
+        # Concatenate the input tensor x with the skip connection tensor along the channel dimension
+        x = torch.cat((x, skip), 1)
+        
+        # Pass the concatenated tensor through the sequential model and return the output
+        x = self.model(x)
+        return x
+
+    
+class UnetDown(nn.Module):
+    def __init__(self, in_channels, out_channels):
+        super(UnetDown, self).__init__()
+        
+        # Create a list of layers for the downsampling block
+        # Each block consists of two ResidualConvBlock layers, followed by a MaxPool2d layer for downsampling
+        layers = [ResidualConvBlock(in_channels, out_channels), ResidualConvBlock(out_channels, out_channels), nn.MaxPool2d(2)]
+        
+        # Use the layers to create a sequential model
+        self.model = nn.Sequential(*layers)
+
+    def forward(self, x):
+        # Pass the input through the sequential model and return the output
+        return self.model(x)
+
+class EmbedFC(nn.Module):
+    def __init__(self, input_dim, emb_dim):
+        super(EmbedFC, self).__init__()
+        '''
+        This class defines a generic one layer feed-forward neural network for embedding input data of
+        dimensionality input_dim to an embedding space of dimensionality emb_dim.
+        '''
+        self.input_dim = input_dim
+        
+        # define the layers for the network
+        layers = [
+            nn.Linear(input_dim, emb_dim),
+            nn.GELU(),
+            nn.Linear(emb_dim, emb_dim),
+        ]
+        
+        # create a PyTorch sequential model consisting of the defined layers
+        self.model = nn.Sequential(*layers)
+
+    def forward(self, x):
+        # flatten the input tensor
+        x = x.view(-1, self.input_dim)
+        # apply the model layers to the flattened tensor
+        return self.model(x)
+    
+def unorm(x):
+    # unity norm. results in range of [0,1]
+    # assume x (h,w,3)
+    xmax = x.max((0,1))
+    xmin = x.min((0,1))
+    return(x - xmin)/(xmax - xmin)
+
+def norm_all(store, n_t, n_s):
+    # runs unity norm on all timesteps of all samples
+    nstore = np.zeros_like(store)
+    for t in range(n_t):
+        for s in range(n_s):
+            nstore[t,s] = unorm(store[t,s])
+    return nstore
+
+def norm_torch(x_all):
+    # runs unity norm on all timesteps of all samples
+    # input is (n_samples, 3,h,w), the torch image format
+    x = x_all.cpu().numpy()
+    xmax = x.max((2,3))
+    xmin = x.min((2,3))
+    xmax = np.expand_dims(xmax,(2,3)) 
+    xmin = np.expand_dims(xmin,(2,3))
+    nstore = (x - xmin)/(xmax - xmin)
+    return torch.from_numpy(nstore)
+
+def gen_tst_context(n_cfeat):
+    """
+    Generate test context vectors
+    """
+    vec = torch.tensor([
+    [1,0,0,0,0], [0,1,0,0,0], [0,0,1,0,0], [0,0,0,1,0], [0,0,0,0,1],  [0,0,0,0,0],      # human, non-human, food, spell, side-facing
+    [1,0,0,0,0], [0,1,0,0,0], [0,0,1,0,0], [0,0,0,1,0], [0,0,0,0,1],  [0,0,0,0,0],      # human, non-human, food, spell, side-facing
+    [1,0,0,0,0], [0,1,0,0,0], [0,0,1,0,0], [0,0,0,1,0], [0,0,0,0,1],  [0,0,0,0,0],      # human, non-human, food, spell, side-facing
+    [1,0,0,0,0], [0,1,0,0,0], [0,0,1,0,0], [0,0,0,1,0], [0,0,0,0,1],  [0,0,0,0,0],      # human, non-human, food, spell, side-facing
+    [1,0,0,0,0], [0,1,0,0,0], [0,0,1,0,0], [0,0,0,1,0], [0,0,0,0,1],  [0,0,0,0,0],      # human, non-human, food, spell, side-facing
+    [1,0,0,0,0], [0,1,0,0,0], [0,0,1,0,0], [0,0,0,1,0], [0,0,0,0,1],  [0,0,0,0,0]]      # human, non-human, food, spell, side-facing
+    )
+    return len(vec), vec
+
+def plot_grid(x,n_sample,n_rows,save_dir,w):
+    # x:(n_sample, 3, h, w)
+    ncols = n_sample//n_rows
+    grid = make_grid(norm_torch(x), nrow=ncols)  # curiously, nrow is number of columns.. or number of items in the row.
+    save_image(grid, save_dir + f"run_image_w{w}.png")
+    print('saved image at ' + save_dir + f"run_image_w{w}.png")
+    return grid
+
+def plot_sample(x_gen_store,n_sample,nrows,save_dir, fn,  w, save=False):
+    ncols = n_sample//nrows
+    sx_gen_store = np.moveaxis(x_gen_store,2,4)                               # change to Numpy image format (h,w,channels) vs (channels,h,w)
+    nsx_gen_store = norm_all(sx_gen_store, sx_gen_store.shape[0], n_sample)   # unity norm to put in range [0,1] for np.imshow
+    
+    # create gif of images evolving over time, based on x_gen_store
+    fig, axs = plt.subplots(nrows=nrows, ncols=ncols, sharex=True, sharey=True,figsize=(ncols,nrows))
+    def animate_diff(i, store):
+        print(f'gif animating frame {i} of {store.shape[0]}', end='\r')
+        plots = []
+        for row in range(nrows):
+            for col in range(ncols):
+                axs[row, col].clear()
+                axs[row, col].set_xticks([])
+                axs[row, col].set_yticks([])
+                plots.append(axs[row, col].imshow(store[i,(row*ncols)+col]))
+        return plots
+    ani = FuncAnimation(fig, animate_diff, fargs=[nsx_gen_store],  interval=200, blit=False, repeat=True, frames=nsx_gen_store.shape[0]) 
+    plt.close()
+    if save:
+        ani.save(save_dir + f"{fn}_w{w}.gif", dpi=100, writer=PillowWriter(fps=5))
+        print('saved gif at ' + save_dir + f"{fn}_w{w}.gif")
+    return ani
+
+
+class CustomDataset(Dataset):
+    def __init__(self, sfilename, lfilename, transform, null_context=False):
+        self.sprites = np.load(sfilename)
+        self.slabels = np.load(lfilename)
+        print(f"sprite shape: {self.sprites.shape}")
+        print(f"labels shape: {self.slabels.shape}")
+        self.transform = transform
+        self.null_context = null_context
+        self.sprites_shape = self.sprites.shape
+        self.slabel_shape = self.slabels.shape
+                
+    # Return the number of images in the dataset
+    def __len__(self):
+        return len(self.sprites)
+    
+    # Get the image and label at a given index
+    def __getitem__(self, idx):
+        # Return the image and label as a tuple
+        if self.transform:
+            image = self.transform(self.sprites[idx])
+            if self.null_context:
+                label = torch.tensor(0).to(torch.int64)
+            else:
+                label = torch.tensor(self.slabels[idx]).to(torch.int64)
+        return (image, label)
+
+    def getshapes(self):
+        # return shapes of data and labels
+        return self.sprites_shape, self.slabel_shape
+
+transform = transforms.Compose([
+    transforms.ToTensor(),                # from [0,255] to range [0.0,1.0]
+    transforms.Normalize((0.5,), (0.5,))  # range [-1,1]
+
+])

requirements.txt

@@ -1,2 +1,3 @@
+ipython
 torch
 torchvision