datasciencedojo commited on
Commit
215728f
1 Parent(s): 1b0d9e3

Create app.py

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  1. app.py +82 -0
app.py ADDED
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+ from PIL import Image, ImageOps
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+ import numpy as np
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+ from collections import OrderedDict
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+ import seaborn as sns
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+ import matplotlib.pyplot as plt
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+ import pandas as pd
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+ from keras.models import load_model
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+ import gradio as gr
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+
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+
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+ def create_plot(data):
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+ sns.set_theme(style="whitegrid")
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+
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+ f, ax = plt.subplots(figsize=(5, 5))
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+
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+ sns.set_color_codes("pastel")
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+ sns.barplot(x="Total", y="Labels", data=data,label="Total", color="b")
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+
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+ sns.set_color_codes("muted")
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+ sns.barplot(x="Confidence Score", y="Labels", data=data,label="Conficence Score", color="b")
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+
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+ ax.legend(ncol=2, loc="lower right", frameon=True)
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+ sns.despine(left=True, bottom=True)
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+ return f
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+
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+
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+ def predict_pneumonia(img):
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+ np.set_printoptions(suppress=True)
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+ model = load_model('keras_model.h5', compile=False)
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+ class_names = open('labels.txt', 'r').readlines()
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+ data = np.ndarray(shape=(1, 224, 224, 3), dtype=np.float32)
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+
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+ # image = Image.open(img).convert('RGB')
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+ image = img
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+ size = (224, 224)
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+ image_PIL = Image.fromarray(image)
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+ image = ImageOps.fit(image_PIL, size, Image.LANCZOS)
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+ image_array = np.asarray(image)
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+ normalized_image_array = (image_array.astype(np.float32) / 127.0) - 1
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+ data[0] = normalized_image_array
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+ prediction = model.predict(data)
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+ index = np.argmax(prediction)
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+ class_name = class_names[index]
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+ confidence_score = prediction[0][index]
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+
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+ c_name = (class_name[2:])[:-1]
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+ if c_name == "Normal":
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+ pneumonia_prediction = "Chest XRay is normal no signs of pneumonia"
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+ other_class = "Pneumonia"
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+ else:
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+ other_class = "Pneumonia"
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+ pneumonia_prediction = "Chest XRay shows signs of pneumonia"
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+
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+ res = {"Labels":[c_name,other_class], "Confidence Score":[(confidence_score*100),(1-confidence_score)*100],"Total":100}
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+ data_for_plot = pd.DataFrame.from_dict(res)
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+
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+ pneumonia_conf_plt = create_plot(data_for_plot)
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+ return pneumonia_prediction,pneumonia_conf_plt
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+
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+
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+
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+ with gr.Blocks() as demo:
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+ with gr.Row():
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+ with gr.Column(scale=4):
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+ with gr.Row():
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+ imgInput = gr.Image()
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+ with gr.Column(scale=1):
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+ pneumonia = gr.Textbox(label='Presence of pneumonia')
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+ plot = gr.Plot(label="Plot")
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+
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+ submit_button = gr.Button(value="Submit")
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+ submit_button.click(fn=predict_pneumonia, inputs=[imgInput], outputs=[pneumonia,plot])
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+
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+ gr.Examples(
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+ examples=["normal_Sample.jpg","pneumonia_sample.jpg"],
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+ inputs=imgInput,
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+ outputs=[pneumonia,plot],
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+ fn=predict_pneumonia,
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+ cache_examples=True,
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+ )
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+
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+ demo.launch()