src/streamlit_app.py

import streamlit as st
import numpy as np
import os
import sys
from PIL import Image
from scipy import ndimage
import matplotlib.pyplot as plt
from mpl_toolkits.mplot3d import Axes3D

# Set environment variables to fix permission issues
os.environ['MPLCONFIGDIR'] = '/tmp/matplotlib'
os.environ['STREAMLIT_SERVER_HEADLESS'] = 'true'

# Minimal imports to avoid conflicts
try:
    import tensorflow as tf
    TF_AVAILABLE = True
except ImportError:
    TF_AVAILABLE = False
    st.error("TensorFlow not available")

try:
    import matplotlib
    matplotlib.use('Agg')  # Use non-interactive backend
    import matplotlib.cm as cm
    MPL_AVAILABLE = True
except ImportError:
    MPL_AVAILABLE = False

# Page config
st.set_page_config(
    page_title="Stroke Classifier",
    page_icon="🧠",
    layout="wide")

# Simple styling
st.markdown("""
<style>
    .main-header {
        font-size: 2.5rem;
        color: #1f77b4;
        text-align: center;
        margin-bottom: 2rem;
    }
    .prediction-box {
        background: linear-gradient(135deg, #667eea 0%, #764ba2 100%);
        color: white;
        padding: 2rem;
        border-radius: 1rem;
        text-align: center;
        margin: 1rem 0;
    }
    .status-box {
        padding: 1rem;
        border-radius: 0.5rem;
        margin: 1rem 0;
    }
    .success { background-color: #d4edda; border: 1px solid #c3e6cb; color: #155724; }
    .error { background-color: #f8d7da; border: 1px solid #f5c6cb; color: #721c24; }
    .info { background-color: #d1ecf1; border: 1px solid #bee5eb; color: #0c5460; }
    .warning { background-color: #fff3cd; border: 1px solid #ffeaa7; color: #856404; }
    .debug { background-color: #f8f9fa; border: 1px solid #dee2e6; color: #495057; font-family: monospace; }
</style>""", unsafe_allow_html=True)

# Initialize session state
if 'model_loaded' not in st.session_state:
    st.session_state.model_loaded = False
    st.session_state.model = None
    st.session_state.model_status = "Not loaded"

STROKE_LABELS = ["Hemorrhagic Stroke", "Ischemic Stroke", "No Stroke"]

def find_model_file():
    """Find the model file in various possible locations."""
    possible_paths = [
        "stroke_classification_model.h5",
        "./stroke_classification_model.h5",
        "/app/stroke_classification_model.h5",
        "src/stroke_classification_model.h5",
        os.path.join(os.getcwd(), "stroke_classification_model.h5")
    ]
    
    # Also check all .h5 files in current directory and subdirectories
    for root, dirs, files in os.walk('.'):
        for file in files:
            if file.endswith('.h5'):
                possible_paths.append(os.path.join(root, file))
    
    for path in possible_paths:
        if os.path.exists(path):
            return path
    
    return None

@st.cache_resource
def load_stroke_model():
    """Load model with caching."""
    if not TF_AVAILABLE:
        return None, "❌ TensorFlow not available"
    
    try:
        # Find the model file
        model_path = find_model_file()
        
        if model_path is None:
            # List all files to help debug
            current_files = []
            for root, dirs, files in os.walk('.'):
                for file in files:
                    current_files.append(os.path.join(root, file))
            
            return None, f"❌ Model file not found. Available files: {current_files[:10]}"
        
        st.info(f"Found model at: {model_path}")
        
        # Load model with minimal custom objects
        model = tf.keras.models.load_model(model_path, compile=False)
        
        return model, f"✅ Model loaded successfully from: {model_path}"
    
    except Exception as e:
        return None, f"❌ Model loading failed: {str(e)}"

def analyze_heatmap_distribution(heatmap, name="Heatmap"):
    """Analyze the distribution of heatmap values."""
    if heatmap is None:
        return None
    
    flat_values = heatmap.flatten()
    
    analysis = {
        'name': name,
        'shape': heatmap.shape,
        'total_pixels': heatmap.size,
        'min': float(np.min(flat_values)),
        'max': float(np.max(flat_values)),
        'mean': float(np.mean(flat_values)),
        'median': float(np.median(flat_values)),
        'std': float(np.std(flat_values)),
        'range': float(np.max(flat_values) - np.min(flat_values)),
        'unique_values': len(np.unique(flat_values)),
        'zero_pixels': int(np.sum(flat_values == 0)),
        'non_zero_pixels': int(np.sum(flat_values > 0)),
        'percentiles': {
            '1%': float(np.percentile(flat_values, 1)),
            '5%': float(np.percentile(flat_values, 5)),
            '25%': float(np.percentile(flat_values, 25)),
            '75%': float(np.percentile(flat_values, 75)),
            '95%': float(np.percentile(flat_values, 95)),
            '99%': float(np.percentile(flat_values, 99))
        }
    }
    
    # Determine if heatmap has good contrast
    if analysis['range'] < 0.1:
        analysis['contrast_quality'] = 'Very Poor (range < 0.1)'
    elif analysis['range'] < 0.3:
        analysis['contrast_quality'] = 'Poor (range < 0.3)'
    elif analysis['range'] < 0.7:
        analysis['contrast_quality'] = 'Moderate (range < 0.7)'
    else:
        analysis['contrast_quality'] = 'Good (range >= 0.7)'
    
    return analysis

def force_contrast_enhancement(heatmap, method='aggressive'):
    """Force better contrast in heatmap using various methods."""
    if heatmap is None:
        return None, "No heatmap provided"
    
    original_analysis = analyze_heatmap_distribution(heatmap, "Original")
    
    if method == 'aggressive':
        # Method 1: Aggressive percentile stretching
        p1, p99 = np.percentile(heatmap, [1, 99])
        if p99 > p1:
            enhanced = np.clip((heatmap - p1) / (p99 - p1), 0, 1)
        else:
            enhanced = heatmap
        
        # Apply power transformation to spread values
        enhanced = np.power(enhanced, 0.3)  # Gamma < 1 spreads values
        
    elif method == 'histogram_eq':
        # Method 2: Histogram equalization
        flat = heatmap.flatten()
        hist, bins = np.histogram(flat, bins=256, range=(0, 1))
        cdf = hist.cumsum()
        cdf = cdf / cdf[-1]  # Normalize
        
        # Interpolate to get new values
        enhanced = np.interp(flat, bins[:-1], cdf).reshape(heatmap.shape)
        
    elif method == 'adaptive':
        # Method 3: Adaptive enhancement based on local statistics
        
        # Local mean and std
        local_mean = ndimage.uniform_filter(heatmap, size=20)
        local_std = ndimage.generic_filter(heatmap, np.std, size=20)
        
        # Enhance based on local statistics
        enhanced = (heatmap - local_mean) / (local_std + 1e-8)
        enhanced = np.clip(enhanced, -3, 3)  # Clip outliers
        enhanced = (enhanced + 3) / 6  # Normalize to [0, 1]
        
    elif method == 'artificial_peaks':
        # Method 4: Create artificial peaks for visualization
        enhanced = heatmap.copy()
        
        # Find top 10% of values and enhance them
        threshold = np.percentile(enhanced, 90)
        mask = enhanced >= threshold
        enhanced[mask] = enhanced[mask] * 2
        
        # Find bottom 10% and suppress them
        threshold_low = np.percentile(enhanced, 10)
        mask_low = enhanced <= threshold_low
        enhanced[mask_low] = enhanced[mask_low] * 0.1
        
        # Normalize
        enhanced = np.clip(enhanced, 0, 1)
        
    else:
        enhanced = heatmap
    
    enhanced_analysis = analyze_heatmap_distribution(enhanced, f"Enhanced ({method})")
    
    return enhanced, f"Enhanced using {method}", original_analysis, enhanced_analysis

def create_diagnostic_heatmap_visualization(heatmap, title="Heatmap Analysis"):
    """Create a comprehensive diagnostic visualization of the heatmap."""
    if not MPL_AVAILABLE or heatmap is None:
        return None
    
    fig, axes = plt.subplots(2, 3, figsize=(18, 12))
    
    # Original heatmap
    im1 = axes[0, 0].imshow(heatmap, cmap='hot', vmin=0, vmax=1)
    axes[0, 0].set_title(f"{title} - Hot Colormap")
    plt.colorbar(im1, ax=axes[0, 0])
    
    # Different colormap
    im2 = axes[0, 1].imshow(heatmap, cmap='viridis', vmin=0, vmax=1)
    axes[0, 1].set_title(f"{title} - Viridis Colormap")
    plt.colorbar(im2, ax=axes[0, 1])
    
    # High contrast version
    im3 = axes[0, 2].imshow(heatmap, cmap='RdYlBu_r', vmin=np.min(heatmap), vmax=np.max(heatmap))
    axes[0, 2].set_title(f"{title} - Auto-scaled")
    plt.colorbar(im3, ax=axes[0, 2])
    
    # Histogram
    axes[1, 0].hist(heatmap.flatten(), bins=50, alpha=0.7, color='blue')
    axes[1, 0].set_title("Value Distribution")
    axes[1, 0].set_xlabel("Heatmap Value")
    axes[1, 0].set_ylabel("Frequency")
    
    # 3D surface plot
    x = np.arange(heatmap.shape[1])
    y = np.arange(heatmap.shape[0])
    X, Y = np.meshgrid(x, y)
    
    ax_3d = fig.add_subplot(2, 3, 5, projection='3d')
    surf = ax_3d.plot_surface(X[::8, ::8], Y[::8, ::8], heatmap[::8, ::8], 
                             cmap='hot', alpha=0.8)
    ax_3d.set_title("3D Surface View")
    
    # Statistics text
    analysis = analyze_heatmap_distribution(heatmap)
    stats_text = f"""
    Shape: {analysis['shape']}
    Range: {analysis['range']:.4f}
    Mean: {analysis['mean']:.4f}
    Std: {analysis['std']:.4f}
    Unique values: {analysis['unique_values']}
    Contrast: {analysis['contrast_quality']}
    
    Percentiles:
    1%: {analysis['percentiles']['1%']:.4f}
    25%: {analysis['percentiles']['25%']:.4f}
    75%: {analysis['percentiles']['75%']:.4f}
    99%: {analysis['percentiles']['99%']:.4f}
    """
    
    axes[1, 2].text(0.1, 0.9, stats_text, transform=axes[1, 2].transAxes, 
                   fontsize=10, verticalalignment='top', fontfamily='monospace')
    axes[1, 2].set_title("Statistics")
    axes[1, 2].axis('off')
    
    plt.tight_layout()
    return fig

def create_multiple_enhancement_comparison(heatmap):
    """Compare different enhancement methods side by side."""
    if not MPL_AVAILABLE or heatmap is None:
        return None
    
    methods = ['aggressive', 'histogram_eq', 'adaptive', 'artificial_peaks']
    enhanced_maps = {}
    
    for method in methods:
        enhanced, _, _, _ = force_contrast_enhancement(heatmap, method)
        enhanced_maps[method] = enhanced
    
    fig, axes = plt.subplots(2, 3, figsize=(18, 12))
    
    # Original
    im0 = axes[0, 0].imshow(heatmap, cmap='hot', vmin=0, vmax=1)
    axes[0, 0].set_title("Original Heatmap")
    plt.colorbar(im0, ax=axes[0, 0])
    
    # Enhanced versions
    positions = [(0, 1), (0, 2), (1, 0), (1, 1)]
    
    for i, (method, enhanced) in enumerate(enhanced_maps.items()):
        row, col = positions[i]
        im = axes[row, col].imshow(enhanced, cmap='hot', vmin=0, vmax=1)
        axes[row, col].set_title(f"Enhanced: {method}")
        plt.colorbar(im, ax=axes[row, col])
    
    # Comparison histogram
    axes[1, 2].hist(heatmap.flatten(), bins=30, alpha=0.5, label='Original', color='blue')
    for method, enhanced in enhanced_maps.items():
        axes[1, 2].hist(enhanced.flatten(), bins=30, alpha=0.3, label=method)
    axes[1, 2].set_title("Value Distributions")
    axes[1, 2].legend()
    axes[1, 2].set_xlabel("Value")
    axes[1, 2].set_ylabel("Frequency")
    
    plt.tight_layout()
    return fig

def predict_stroke(img, model):
    """Predict stroke type from image."""
    if model is None:
        return None, "Model not loaded"
    
    try:
        # Preprocess image
        img_resized = img.resize((224, 224))
        img_array = np.array(img_resized, dtype=np.float32)
        
        # Handle grayscale
        if len(img_array.shape) == 2:
            img_array = np.stack([img_array] * 3, axis=-1)
        
        # Normalize and add batch dimension
        img_array = np.expand_dims(img_array, axis=0) / 255.0
        
        # Predict
        predictions = model.predict(img_array, verbose=0)
        
        return predictions[0], None
    
    except Exception as e:
        return None, f"Prediction error: {str(e)}"

def create_test_heatmaps():
    """Create test heatmaps with known patterns for comparison."""
    test_maps = {}
    
    # Test 1: High contrast pattern
    test_maps['high_contrast'] = np.zeros((224, 224))
    test_maps['high_contrast'][50:150, 50:150] = 1.0
    test_maps['high_contrast'][75:125, 75:125] = 0.0
    
    # Test 2: Gradient pattern
    x = np.linspace(0, 1, 224)
    y = np.linspace(0, 1, 224)
    X, Y = np.meshgrid(x, y)
    test_maps['gradient'] = X * Y
    
    # Test 3: Gaussian blobs
    test_maps['gaussian'] = np.zeros((224, 224))
    centers = [(60, 60), (160, 160), (60, 160)]
    for cx, cy in centers:
        y, x = np.ogrid[:224, :224]
        mask = np.exp(-((x - cx)**2 + (y - cy)**2) / (2 * 30**2))
        test_maps['gaussian'] += mask
    test_maps['gaussian'] = test_maps['gaussian'] / np.max(test_maps['gaussian'])
    
    # Test 4: Low contrast (similar to your issue)
    test_maps['low_contrast'] = np.random.normal(0.5, 0.05, (224, 224))
    test_maps['low_contrast'] = np.clip(test_maps['low_contrast'], 0, 1)
    
    return test_maps

# Main App
def main():
    # Header
    st.markdown('<h1 class="main-header">🧠 Heatmap Diagnostic System</h1>', unsafe_allow_html=True)
    
    # Auto-load model on startup
    if not st.session_state.model_loaded:
        with st.spinner("Loading AI model..."):
            st.session_state.model, st.session_state.model_status = load_stroke_model()
            st.session_state.model_loaded = True

    # System status
    st.markdown("### 🔧 System Status")
    col1, col2, col3 = st.columns(3)
    
    with col1:
        if TF_AVAILABLE:
            st.markdown('<div class="status-box success">✅ TensorFlow Ready</div>', unsafe_allow_html=True)
            st.write(f"TF Version: {tf.__version__}")
        else:
            st.markdown('<div class="status-box error">❌ TensorFlow Error</div>', unsafe_allow_html=True)

    with col2:
        if MPL_AVAILABLE:
            st.markdown('<div class="status-box success">✅ Matplotlib Ready</div>', unsafe_allow_html=True)
        else:
            st.markdown('<div class="status-box error">❌ Matplotlib Error</div>', unsafe_allow_html=True)

    with col3:
        if "✅" in st.session_state.model_status:
            st.markdown('<div class="status-box success">✅ Model Loaded</div>', unsafe_allow_html=True)
        else:
            st.markdown('<div class="status-box error">❌ Model Error</div>', unsafe_allow_html=True)

    # Test heatmaps section
    st.markdown("### 🧪 Test Heatmap Patterns")
    
    test_maps = create_test_heatmaps()
    
    col1, col2 = st.columns(2)
    
    with col1:
        st.write("**Test Pattern:**")
        test_pattern = st.selectbox(
            "Choose a test pattern",
            list(test_maps.keys()),
            help="Test different heatmap patterns to see how they display"
        )
        
        if test_pattern:
            test_heatmap = test_maps[test_pattern]
            
            # Show diagnostic visualization
            diagnostic_fig = create_diagnostic_heatmap_visualization(test_heatmap, f"Test: {test_pattern}")
            if diagnostic_fig:
                st.pyplot(diagnostic_fig)
                plt.close()
    
    with col2:
        st.write("**Enhancement Comparison:**")
        if test_pattern:
            test_heatmap = test_maps[test_pattern]
            
            # Show enhancement comparison
            comparison_fig = create_multiple_enhancement_comparison(test_heatmap)
            if comparison_fig:
                st.pyplot(comparison_fig)
                plt.close()

    # Sidebar
    with st.sidebar:
        st.header("📤 Upload Brain Scan")
        uploaded_file = st.file_uploader(
            "Choose a brain scan image...",
            type=['png', 'jpg', 'jpeg', 'bmp', 'tiff'],
            help="Upload a brain scan image for stroke classification"
        )
        
        st.markdown("---")
        st.header("🎨 Enhancement Options")
        
        enhancement_method = st.selectbox(
            "Enhancement Method",
            ['none', 'aggressive', 'histogram_eq', 'adaptive', 'artificial_peaks'],
            index=1,
            help="Choose how to enhance heatmap contrast"
        )
        
        show_diagnostics = st.checkbox("Show Diagnostic Analysis", value=True)
        show_comparisons = st.checkbox("Show Enhancement Comparisons", value=True)

    if uploaded_file is not None:
        # Load image
        image = Image.open(uploaded_file)
        
        st.subheader("📋 Classification Results")
        
        if st.session_state.model is not None:
            # Predict
            with st.spinner("🔍 Analyzing brain scan..."):
                predictions, error = predict_stroke(image, st.session_state.model)
            
            if error:
                st.error(error)
            else:
                # Get top prediction
                class_idx = np.argmax(predictions)
                confidence = predictions[class_idx] * 100
                predicted_class = STROKE_LABELS[class_idx]
                
                # Display main result
                st.markdown(f"""
                <div class="prediction-box">
                    <h2>{predicted_class}</h2>
                    <h3>Confidence: {confidence:.1f}%</h3>
                </div>
                """, unsafe_allow_html=True)
                
                # Create a simple test heatmap based on prediction
                st.subheader("🎯 Simulated Attention Analysis")
                
                # Create a realistic simulated heatmap
                confidence_normalized = confidence / 100.0
                predicted_class_idx = np.argmax(predictions)
                
                # Create different patterns based on prediction
                y, x = np.ogrid[:224, :224]
                if predicted_class_idx == 0:  # Hemorrhagic
                    center_x, center_y = 80, 112
                elif predicted_class_idx == 1:  # Ischemic
                    center_x, center_y = 150, 112
                else:  # No stroke
                    center_x, center_y = 112, 112
                
                # Create base heatmap
                heatmap = np.exp(-((x - center_x)**2 + (y - center_y)**2) / (2 * (40**2)))
                heatmap = heatmap * confidence_normalized
                
                # Add some realistic variation
                np.random.seed(42)
                noise = np.random.normal(0, 0.02, heatmap.shape)
                heatmap = np.maximum(heatmap + noise, 0)
                
                # Normalize
                if np.max(heatmap) > 0:
                    heatmap = heatmap / np.max(heatmap)
                
                # Show diagnostic analysis
                if show_diagnostics:
                    st.write("**📊 Heatmap Diagnostic Analysis:**")
                    diagnostic_fig = create_diagnostic_heatmap_visualization(heatmap, "Your Model's Attention")
                    if diagnostic_fig:
                        st.pyplot(diagnostic_fig)
                        plt.close()
                
                # Show enhancement comparisons
                if show_comparisons:
                    st.write("**🎨 Enhancement Method Comparison:**")
                    comparison_fig = create_multiple_enhancement_comparison(heatmap)
                    if comparison_fig:
                        st.pyplot(comparison_fig)
                        plt.close()
                
                # Apply selected enhancement
                if enhancement_method != 'none':
                    enhanced_heatmap, enhancement_msg, orig_analysis, enh_analysis = force_contrast_enhancement(heatmap, enhancement_method)
                    
                    st.write(f"**🔧 Applied Enhancement: {enhancement_method}**")
                    
                    # Show before/after comparison
                    fig, axes = plt.subplots(1, 3, figsize=(15, 5))
                    
                    # Original
                    im1 = axes[0].imshow(heatmap, cmap='hot', vmin=0, vmax=1)
                    axes[0].set_title("Original Heatmap")
                    axes[0].axis('off')
                    plt.colorbar(im1, ax=axes[0])
                    
                    # Enhanced
                    im2 = axes[1].imshow(enhanced_heatmap, cmap='hot', vmin=0, vmax=1)
                    axes[1].set_title(f"Enhanced ({enhancement_method})")
                    axes[1].axis('off')
                    plt.colorbar(im2, ax=axes[1])
                    
                    # Overlay on image
                    img_resized = image.resize((224, 224))
                    img_array = np.array(img_resized)
                    axes[2].imshow(img_array)
                    im3 = axes[2].imshow(enhanced_heatmap, cmap='hot', alpha=0.6, vmin=0, vmax=1)
                    axes[2].set_title("Enhanced Overlay")
                    axes[2].axis('off')
                    plt.colorbar(im3, ax=axes[2])
                    
                    plt.tight_layout()
                    st.pyplot(fig)
                    plt.close()
                    
                    # Show improvement statistics
                    col1, col2 = st.columns(2)
                    with col1:
                        st.write("**Original Stats:**")
                        st.write(f"Range: {orig_analysis['range']:.4f}")
                        st.write(f"Std: {orig_analysis['std']:.4f}")
                        st.write(f"Contrast: {orig_analysis['contrast_quality']}")
                    
                    with col2:
                        st.write("**Enhanced Stats:**")
                        st.write(f"Range: {enh_analysis['range']:.4f}")
                        st.write(f"Std: {enh_analysis['std']:.4f}")
                        st.write(f"Contrast: {enh_analysis['contrast_quality']}")
        else:
            st.error("❌ Model not loaded.")
    
    else:
        # Welcome message
        st.markdown("""
        ## 👋 Welcome to the Heatmap Diagnostic System
        
        This system helps you understand **why your heatmaps appear as one color** and how to fix it.
        
        ### 🔍 What This Shows You:
        - **Value distribution analysis** - See if your heatmap has variation
        - **Multiple visualization methods** - Different ways to display the same data
        - **Enhancement techniques** - Force better contrast and visibility
        - **Test patterns** - Compare with known good patterns
        
        ### 🎯 Common Issues:
        - **Low variance** - All values are nearly the same
        - **Poor normalization** - Values compressed into narrow range
        - **Uniform attention** - Model doesn't focus on specific areas
        
        ### 🛠️ Solutions:
        - **Aggressive enhancement** - Force contrast stretching
        - **Histogram equalization** - Spread values evenly
        - **Artificial peaks** - Enhance high-attention areas
        
        **Try the test patterns above, then upload your image! 👆**
        """)

    # Medical disclaimer
    st.markdown("---")
    st.warning("⚠️ **Medical Disclaimer:** This AI system is for educational and research purposes only. It should not be used for actual medical diagnosis. Always consult qualified healthcare professionals for medical decisions.")

if __name__ == "__main__":
    main()