andreped commited on
Commit
62109e8
1 Parent(s): 0531a07

Test deployment with app_port "3000:80"

Browse files
.docker/Viewer-v3.x/default.conf.template ADDED
@@ -0,0 +1,16 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ server {
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+ listen ${PORT} default_server;
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+ listen [::]:${PORT} default_server;
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+ location / {
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+ root /usr/share/nginx/html;
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+ index index.html index.htm;
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+ try_files $uri $uri/ /index.html;
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+ add_header Cross-Origin-Opener-Policy same-origin;
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+ add_header Cross-Origin-Embedder-Policy require-corp;
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+ add_header Cross-Origin-Resource-Policy same-origin;
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+ proxy_set_header Host $host;
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+ proxy_set_header X-Real-IP $remote_addr;
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+ proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
14
+ proxy_set_header X-Forwarded-Proto $http_x_forwarded_proto;
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+ }
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+ }
.docker/Viewer-v3.x/default.conf_old.template ADDED
@@ -0,0 +1,21 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ server {
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+ listen ${PORT} default_server;
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+ listen [::]:${PORT} default_server;
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+ location / {
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+ root /usr/share/nginx/html;
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+ index index.html index.htm;
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+ try_files $uri $uri/ /index.html;
8
+ add_header Cross-Origin-Opener-Policy same-origin;
9
+ add_header Cross-Origin-Embedder-Policy require-corp;
10
+ add_header Cross-Origin-Resource-Policy same-origin;
11
+ proxy_set_header Host $host;
12
+ proxy_set_header X-Real-IP $remote_addr;
13
+ proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
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+ proxy_set_header X-Forwarded-Proto $http_x_forwarded_proto;
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+ }
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+ error_page 500 502 503 504 /50x.html;
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+ location = /50x.html {
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+ location = /50x.html {
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+ root /usr/share/nginx/html;
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+ }
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+ }
.docker/Viewer-v3.x/entrypoint.sh ADDED
@@ -0,0 +1,45 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ #!/bin/sh
2
+
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+ if [ -n "$SSL_PORT" ]
4
+ then
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+ envsubst '${SSL_PORT}:${PORT}' < /usr/src/default.ssl.conf.template > /etc/nginx/conf.d/default.conf
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+ else
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+ envsubst '${PORT}' < /usr/src/default.conf.template > /etc/nginx/conf.d/default.conf
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+ fi
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+
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+ if [ -n "$APP_CONFIG" ]
11
+ then
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+ echo "$APP_CONFIG" > /usr/share/nginx/html/app-config.js
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+ fi
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+
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+ if [ -n "$CLIENT_ID" ] || [ -n "$HEALTHCARE_API_ENDPOINT" ]
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+ then
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+ # If CLIENT_ID is specified, use the google.js configuration with the modified ID
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+ if [ -n "$CLIENT_ID" ]
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+ then
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+ echo "Google Cloud Healthcare \$CLIENT_ID has been provided: "
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+ echo "$CLIENT_ID"
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+ echo "Updating config..."
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+
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+ # - Use SED to replace the CLIENT_ID that is currently in google.js
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+ sed -i -e "s/YOURCLIENTID.apps.googleusercontent.com/$CLIENT_ID/g" /usr/share/nginx/html/google.js
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+ fi
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+
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+ # If HEALTHCARE_API_ENDPOINT is specified, use the google.js configuration with the modified endpoint
29
+ if [ -n "$HEALTHCARE_API_ENDPOINT" ]
30
+ then
31
+ echo "Google Cloud Healthcare \$HEALTHCARE_API_ENDPOINT has been provided: "
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+ echo "$HEALTHCARE_API_ENDPOINT"
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+ echo "Updating config..."
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+
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+ # - Use SED to replace the HEALTHCARE_API_ENDPOINT that is currently in google.js
36
+ sed -i -e "s+https://healthcare.googleapis.com/v1+$HEALTHCARE_API_ENDPOINT+g" /usr/share/nginx/html/google.js
37
+ fi
38
+
39
+ # - Copy google.js to overwrite app-config.js
40
+ cp /usr/share/nginx/html/google.js /usr/share/nginx/html/app-config.js
41
+ fi
42
+
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+ echo "Starting Nginx to serve the OHIF Viewer..."
44
+
45
+ exec "$@"
Dockerfile CHANGED
@@ -3,15 +3,20 @@ FROM ohif/app:v3.7.0-beta.74
3
  # first set user as root to add new user (then later change to user)
4
  USER root
5
 
6
- # Set up a new user named "user" with user ID 1000
7
- # RUN useradd -m -u 1000 user
8
- RUN adduser -D -u 1000 "user"
9
 
10
- # Switch to the "user" user
11
- USER user
 
 
 
12
 
13
  # Set port as environmental variable for reverse proxy
14
- ENV PORT=8080
 
 
15
 
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  # Set home to the user's home directory
17
  ENV HOME=/home/user \
@@ -21,19 +26,42 @@ ENV HOME=/home/user \
21
  WORKDIR $HOME/app
22
 
23
  # Copy the current directory contents into the container at $HOME/app setting the owner to the user
24
- COPY --chown=user . $HOME/app
25
-
26
- RUN ls
27
 
28
  # change to nginx user
29
- USER nginx
 
 
30
 
31
- #CMD ["docker-compose", "-f", "/code/dsa/docker-compose.yml", "up", "-d"]
 
 
 
 
32
 
33
- # ENTRYPOINT ["sh", "/docker-entrypoint.sh"]
 
 
 
 
 
 
 
 
 
 
34
 
35
  # reverse proxy server
36
- EXPOSE 3000
37
- EXPOSE 8080
 
38
 
 
 
 
 
 
 
39
  CMD ["nginx", "-g", "daemon off;"]
 
 
 
3
  # first set user as root to add new user (then later change to user)
4
  USER root
5
 
6
+ # To install usermod in Alpine Linux
7
+ #RUN echo http://dl-2.alpinelinux.org/alpine/edge/community/ >> /etc/apk/repositories
8
+ #RUN apk add -U shadow
9
 
10
+ # change user ID of "nginx" to 1000 to work with HF spaces
11
+ # RUN find / -uid 1000 -exec chown -h 1000 {} +
12
+ #RUN usermod -u 1000 nginx
13
+
14
+ USER nginx
15
 
16
  # Set port as environmental variable for reverse proxy
17
+ # ENV PORT=80
18
+
19
+ RUN ls
20
 
21
  # Set home to the user's home directory
22
  ENV HOME=/home/user \
 
26
  WORKDIR $HOME/app
27
 
28
  # Copy the current directory contents into the container at $HOME/app setting the owner to the user
29
+ #COPY --chown=nginx . $HOME/app
 
 
30
 
31
  # change to nginx user
32
+ #USER nginx
33
+
34
+ #USER user
35
 
36
+ # Copy nginx configuration
37
+ #COPY --chown=nginx nginx.conf /etc/nginx/sites-available/default
38
+ #COPY --chown=nginx .docker/Viewer-v3.x/default.conf.template /usr/src/default.conf.template
39
+ COPY --chown=nginx:nginx .docker/Viewer-v3.x /usr/src
40
+ RUN chmod 777 /usr/src/entrypoint.sh
41
 
42
+ #RUN chmod 777 /usr/src/entrypoint.sh
43
+
44
+ #COPY --chown=nginx . .
45
+
46
+ # RUN rm /etc/nginx/conf.d/default.conf
47
+
48
+ #USER nginx
49
+ #COPY --chown=nginx:nginx .docker/Viewer-v3.x /usr/src
50
+ #RUN chmod 777 /usr/src/entrypoint.sh
51
+
52
+ #RUN chmod +x /usr/src/entrypoint.sh
53
 
54
  # reverse proxy server
55
+ #EXPOSE 80
56
+ #EXPOSE 80/tcp
57
+ #EXPOSE 3000
58
 
59
+ # change back to nginx user
60
+ #USER nginx
61
+
62
+ ENTRYPOINT ["/usr/src/entrypoint.sh"]
63
+
64
+ # Launch nginx
65
  CMD ["nginx", "-g", "daemon off;"]
66
+
67
+ #CMD ["bash", "run.sh"]
README.md CHANGED
@@ -3,7 +3,7 @@ title: 'dsa4hf: Project to showcase AI solutions for medical applications in OHI
3
  colorFrom: indigo
4
  colorTo: indigo
5
  sdk: docker
6
- app_port: 3000
7
  emoji: 🔬
8
  pinned: false
9
  license: mit
 
3
  colorFrom: indigo
4
  colorTo: indigo
5
  sdk: docker
6
+ app_port: "3000:80"
7
  emoji: 🔬
8
  pinned: false
9
  license: mit
nginx.conf ADDED
@@ -0,0 +1,24 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ server {
2
+ listen 3000 default_server;
3
+ listen [::]:3000 default_server;
4
+
5
+ root /usr/share/nginx/html;
6
+ index index.html index.htm;
7
+
8
+ server_name _;
9
+ location / {
10
+ # serve OHIF 3000
11
+ proxy_pass http://localhost:80;
12
+ proxy_set_header Host $host;
13
+ proxy_set_header X-Real-IP $remote_addr;
14
+ proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
15
+ #proxy_set_header X-Forwarded-Proto $scheme;
16
+ proxy_set_header X-Forwarded-Proto http;
17
+ proxy_set_header X-Forwarded-Ssl off;
18
+ proxy_set_header X-Url-Scheme http;
19
+ proxy_buffering off;
20
+ proxy_http_version 1.1;
21
+ proxy_set_header Upgrade $http_upgrade;
22
+ proxy_set_header Connection "upgrade";
23
+ }
24
+ }
nginx_old.conf ADDED
@@ -0,0 +1,24 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ server {
2
+ listen 3000 default_server;
3
+ listen [::]:3000 default_server;
4
+
5
+ root /usr/share/nginx/html;
6
+ index index.html index.htm;
7
+
8
+ server_name _;
9
+ location / {
10
+ # serve OHIF 3000
11
+ proxy_pass http://localhost:80;
12
+ proxy_set_header Host $host;
13
+ proxy_set_header X-Real-IP $remote_addr;
14
+ proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
15
+ #proxy_set_header X-Forwarded-Proto $scheme;
16
+ proxy_set_header X-Forwarded-Proto http;
17
+ proxy_set_header X-Forwarded-Ssl off;
18
+ proxy_set_header X-Url-Scheme http;
19
+ proxy_buffering off;
20
+ proxy_http_version 1.1;
21
+ proxy_set_header Upgrade $http_upgrade;
22
+ proxy_set_header Connection "upgrade";
23
+ }
24
+ }