Commit History

Moved chainer imports inside functions [no ci]
6faad95

andreped commited on

Enabled to disable multiprocessing for inference + disabled mp for app
0676668

andreped commited on

added fix for handling one or none unique liver segments
fcf7c10

andreped commited on

Updated README
d479416

Javier Pérez de Frutos commited on

Added .nii.gz support
188227a

Javier Pérez de Frutos commited on

refactored to PEP8
3120fa9

andreped commited on

filtered predicted vessels outside the predicted liver parenchyma region
8988f76

andreped commited on

changed tqdm for vessel seg for consistency
0db97df

andreped commited on

mp fix
31605b7

andreped commited on

potential multiprocessing fix for macos
7c205cc

andreped commited on

fix for chainer inference when cupy is not installed and cpu is not specific
224e8c1

andreped commited on

working solution
f7fc178

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typo
68ecff8

andreped commited on

potential fix for path
f0851c4

andreped commited on

fix for deadlock issue on macOSX
9f563e6

andreped commited on

refactoring, adding informative prints for liver vessel segmentation in log, which supports verbose mode
b437043

andreped commited on

finally working. Now the CLI properly installs using pip and it can be used without any dependency issues across all relevant operating systems
d1ff5ab

andreped commited on

tried importing Config directly, instead of the script
1ff1479

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test
82fe6a3

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typo
d2c1bce

andreped commited on

worked, now have to add similar fix for all scripts
6310170

andreped commited on

moved file to utils
c1db270

andreped commited on

Added option to segment the portal and hepatic veins (one class). Liver segmentation is now run in a separate Process, as TF is unable to clear the GPU manually - only when a session is killed, which is only when a Process is finished/killed.
362a9f8

andreped commited on