andreped commited on
Commit
b1a0ecc
1 Parent(s): ec64097

Fixed model download + add to image

Browse files
Files changed (2) hide show
  1. .dockerignore +0 -2
  2. Dockerfile +7 -4
.dockerignore CHANGED
@@ -3,8 +3,6 @@ build/
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  dist/
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  livermask.egg-info/
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  *.DS_Store
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- *.h5
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- *.npz
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  *.nii
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  *__pycache__/
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  .idea/
 
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  dist/
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  livermask.egg-info/
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  *.DS_Store
 
 
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  *.nii
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  *__pycache__/
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  .idea/
Dockerfile CHANGED
@@ -22,10 +22,6 @@ WORKDIR /code
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  RUN apt-get update -y
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  RUN apt install git --fix-missing -y
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- # Download pretrained parenchyma model
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- RUN wget "https://github.com/andreped/livermask/releases/download/trained-models-v1/model.h5"
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- COPY ./model.h5 /code/model.h5
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-
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  # install dependencies
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  COPY ./demo/requirements.txt /code/demo/requirements.txt
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  RUN python3.7 -m pip install --no-cache-dir --upgrade -r /code/demo/requirements.txt
@@ -33,6 +29,13 @@ RUN python3.7 -m pip install --no-cache-dir --upgrade -r /code/demo/requirements
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  # resolve issue with tf==2.4 and gradio dependency collision issue
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  RUN python3.7 -m pip install --force-reinstall typing_extensions==4.0.0
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  # Set up a new user named "user" with user ID 1000
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  RUN useradd -m -u 1000 user
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  RUN apt-get update -y
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  RUN apt install git --fix-missing -y
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  # install dependencies
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  COPY ./demo/requirements.txt /code/demo/requirements.txt
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  RUN python3.7 -m pip install --no-cache-dir --upgrade -r /code/demo/requirements.txt
 
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  # resolve issue with tf==2.4 and gradio dependency collision issue
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  RUN python3.7 -m pip install --force-reinstall typing_extensions==4.0.0
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+ # Install wget
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+ RUN apt install wget -y
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+
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+ # Download pretrained parenchyma model
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+ RUN wget "https://github.com/andreped/livermask/releases/download/trained-models-v1/model.h5"
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+ #COPY --chown=user ./model.h5 /code/model.h5
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+
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  # Set up a new user named "user" with user ID 1000
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  RUN useradd -m -u 1000 user
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