livermask / requirements.txt
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Added option to segment the portal and hepatic veins (one class). Liver segmentation is now run in a separate Process, as TF is unable to clear the GPU manually - only when a session is killed, which is only when a Process is finished/killed.
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��absl-py==0.13.0
astunparse==1.6.3
cached-property==1.5.2
cachetools==4.2.2
certifi==2021.5.30
chainer==7.8.0
charset-normalizer==2.0.4
clang==5.0
colorama==0.4.4
cupy-cuda110==9.6.0
cycler==0.10.0
dataclasses==0.8
decorator==4.4.2
fastrlock==0.8
filelock==3.0.12
flatbuffers==1.12
gast==0.3.3
gdown==3.13.0
google-auth==1.35.0
google-auth-oauthlib==0.4.6
google-pasta==0.2.0
grpcio==1.32.0
h5py==2.10.0
idna==3.2
imageio==2.9.0
importlib-metadata==4.8.1
keras==2.6.0
Keras-Preprocessing==1.1.2
kiwisolver==1.3.1
livermask @ git+https://github.com/andreped/livermask.git@b3a9b4ed3d0ba575e2cc57696fc00de5106888c0
llvmlite==0.36.0
Markdown==3.3.4
matplotlib==3.3.4
networkx==2.5.1
nibabel==3.2.1
numba==0.53.1
numpy==1.19.5
oauthlib==3.1.1
opt-einsum==3.3.0
packaging==21.0
Pillow==8.3.2
protobuf==3.17.3
pyasn1==0.4.8
pyasn1-modules==0.2.8
pyparsing==2.4.7
PySocks==1.7.1
python-dateutil==2.8.2
PyWavelets==1.1.1
PyYAML==6.0
requests==2.26.0
requests-oauthlib==1.3.0
rsa==4.7.2
scikit-image==0.17.2
scipy==1.5.4
six==1.15.0
tensorboard==2.6.0
tensorboard-data-server==0.6.1
tensorboard-plugin-wit==1.8.0
tensorflow==2.4.0
tensorflow-estimator==2.4.0
termcolor==1.1.0
tifffile==2020.9.3
tqdm==4.62.2
typing-extensions==3.7.4.3
urllib3==1.26.6
Werkzeug==2.0.1
wrapt==1.12.1
zipp==3.5.0