[refactor] renamed backend package to samgis

.coveragerc

@@ -1,9 +1,9 @@
 [run]
-source = src
+source = samgis
 omit = ./venv/*,*tests*,*apps.py,*manage.py,*__init__.py,*migrations*,*asgi*,*wsgi*,*admin.py,*urls.py,./tests/*
 
 [report]
 omit = ./venv/*,*tests*,*apps.py,*manage.py,*__init__.py,*migrations*,*asgi*,*wsgi*,*admin.py,*urls.py,./tests/*
 
 exclude_lines =
-     if __name__ == .__main__.:
+     if __name__ == .__main__.:

README.md

@@ -66,7 +66,7 @@ there is `Pipfile` (sphinx docs is hosted on Cloudflare Pages).
 Tests are defined in the `tests` folder in this project. Use PIP to install the test dependencies and run tests.
 
 ```bash
-python -m pytest --cov=src --cov-report=term-missing && coverage html
+python -m pytest --cov=samgis --cov-report=term-missing && coverage html
 ```
 
 ## Update the static documentation with sphinx
@@ -81,7 +81,7 @@ Run the command from the project root:
 cd docs && sphinx-quickstart -p SamGIS -a "alessandro trinca tornidor" -r 1.0.0 -l python --master index
 
 # update docs folder (from project root)
-sphinx-apidoc -f -o docs src
+sphinx-apidoc -f -o docs samgis
 ```
 
 Then it's possible to generate the HTML pages 

dockerfiles/dockerfile-fastapi-samgeo

@@ -1,38 +0,0 @@
-FROM ghcr.io/osgeo/gdal:ubuntu-small-3.7.2
-
-WORKDIR /code
-COPY ./requirements_dockerfile.txt /code/requirements_dockerfile.txt
-COPY ./requirements_pip.txt /code/requirements_pip.txt
-
-RUN apt update && apt install -y g++ make cmake unzip libcurl4-openssl-dev python3-pip
-
-# avoid segment-geospatial exception caused by missing libGL.so.1 library
-RUN apt install -y libgl1 curl
-RUN ls -ld /usr/lib/x86_64-linux-gnu/libGL.so* || echo "libGL.so* not found..."
-
-RUN which python
-RUN python --version
-RUN python -m pip install --no-cache-dir --upgrade -r /code/requirements_pip.txt
-RUN python -m pip install torch torchvision --index-url https://download.pytorch.org/whl/cpu
-RUN python -m pip install --no-cache-dir -r /code/requirements_dockerfile.txt
-
-RUN useradd -m -u 1000 user
-
-USER user
-
-ENV HOME=/home/user \
-	PATH=/home/user/.local/bin:$PATH
-
-WORKDIR $HOME/app
-
-RUN curl -o ${HOME}/sam_vit_h_4b8939.pth https://dl.fbaipublicfiles.com/segment_anything/sam_vit_h_4b8939.pth
-RUN ls -l ${HOME}/
-COPY --chown=user . $HOME/app
-
-RUN echo $HOME/app
-RUN echo $HOME/
-
-RUN ls -l $HOME/app
-RUN ls -l $HOME/
-
-CMD ["uvicorn", "src.main:app", "--host", "0.0.0.0", "--port", "7860"]

dockerfiles/dockerfile-lambda-fastsam-api

@@ -6,7 +6,7 @@ ARG PYTHONPATH="${LAMBDA_TASK_ROOT}:${PYTHONPATH}:/usr/local/lib/python3/dist-pa
 
 # Set working directory to function root directory
 WORKDIR ${LAMBDA_TASK_ROOT}
-COPY ./src ${LAMBDA_TASK_ROOT}/src
+COPY ./samgis ${LAMBDA_TASK_ROOT}/samgis
 COPY ./machine_learning_models ${LAMBDA_TASK_ROOT}/machine_learning_models
 
 RUN ls -l /usr/bin/which
@@ -28,7 +28,7 @@ RUN python -m pip list
 RUN python -m pip freeze
 RUN df -h
 RUN ls -l /lambda-entrypoint.sh
-RUN ls -l ${LAMBDA_TASK_ROOT}/src/
+RUN ls -l ${LAMBDA_TASK_ROOT}/samgis/
 
 # ENTRYPOINT  ["/lambda-entrypoint.sh"]
-CMD [ "src.io.lambda_wrapper.lambda_handler" ]
+CMD [ "samgis.io.lambda_wrapper.lambda_handler" ]

docs/modules.rst

@@ -1,7 +1,7 @@
-src
-===
+samgis
+======
 
 .. toctree::
    :maxdepth: 4
 
-   src
+   samgis

docs/{src.io.rst → samgis.io.rst}

@@ -1,37 +1,45 @@
-src.io package
-==============
+samgis.io package
+=================
 
 Submodules
 ----------
 
-src.io.coordinates\_pixel\_conversion module
---------------------------------------------
+samgis.io.coordinates\_pixel\_conversion module
+-----------------------------------------------
 
-.. automodule:: src.io.coordinates_pixel_conversion
+.. automodule:: samgis.io.coordinates_pixel_conversion
    :members:
    :undoc-members:
    :show-inheritance:
 
-src.io.geo\_helpers module
---------------------------
+samgis.io.geo\_helpers module
+-----------------------------
 
-.. automodule:: src.io.geo_helpers
+.. automodule:: samgis.io.geo_helpers
    :members:
    :undoc-members:
    :show-inheritance:
 
-src.io.lambda\_helpers module
------------------------------
+samgis.io.lambda\_helpers module
+--------------------------------
+
+.. automodule:: samgis.io.lambda_helpers
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+samgis.io.lambda\_wrapper module
+--------------------------------
 
-.. automodule:: src.io.lambda_helpers
+.. automodule:: samgis.io.lambda_wrapper
    :members:
    :undoc-members:
    :show-inheritance:
 
-src.io.tms2geotiff module
--------------------------
+samgis.io.tms2geotiff module
+----------------------------
 
-.. automodule:: src.io.tms2geotiff
+.. automodule:: samgis.io.tms2geotiff
    :members:
    :undoc-members:
    :show-inheritance:
@@ -39,7 +47,7 @@ src.io.tms2geotiff module
 Module contents
 ---------------
 
-.. automodule:: src.io
+.. automodule:: samgis.io
    :members:
    :undoc-members:
    :show-inheritance:

docs/{src.prediction_api.rst → samgis.prediction_api.rst}

@@ -1,21 +1,21 @@
-src.prediction\_api package
-===========================
+samgis.prediction\_api package
+==============================
 
 Submodules
 ----------
 
-src.prediction\_api.predictors module
--------------------------------------
+samgis.prediction\_api.predictors module
+----------------------------------------
 
-.. automodule:: src.prediction_api.predictors
+.. automodule:: samgis.prediction_api.predictors
    :members:
    :undoc-members:
    :show-inheritance:
 
-src.prediction\_api.sam\_onnx module
-------------------------------------
+samgis.prediction\_api.sam\_onnx module
+---------------------------------------
 
-.. automodule:: src.prediction_api.sam_onnx
+.. automodule:: samgis.prediction_api.sam_onnx
    :members:
    :undoc-members:
    :show-inheritance:
@@ -23,7 +23,7 @@ src.prediction\_api.sam\_onnx module
 Module contents
 ---------------
 
-.. automodule:: src.prediction_api
+.. automodule:: samgis.prediction_api
    :members:
    :undoc-members:
    :show-inheritance:

docs/{src.rst → samgis.rst}

@@ -1,5 +1,5 @@
-src package
-===========
+samgis package
+==============
 
 Subpackages
 -----------
@@ -7,25 +7,14 @@ Subpackages
 .. toctree::
    :maxdepth: 4
 
-   src.io
-   src.prediction_api
-   src.utilities
-
-Submodules
-----------
-
-src.app module
---------------
-
-.. automodule:: src.app
-   :members:
-   :undoc-members:
-   :show-inheritance:
+   samgis.io
+   samgis.prediction_api
+   samgis.utilities
 
 Module contents
 ---------------
 
-.. automodule:: src
+.. automodule:: samgis
    :members:
    :undoc-members:
    :show-inheritance:

docs/{src.utilities.rst → samgis.utilities.rst}

@@ -1,37 +1,37 @@
-src.utilities package
-=====================
+samgis.utilities package
+========================
 
 Submodules
 ----------
 
-src.utilities.constants module
-------------------------------
+samgis.utilities.constants module
+---------------------------------
 
-.. automodule:: src.utilities.constants
+.. automodule:: samgis.utilities.constants
    :members:
    :undoc-members:
    :show-inheritance:
 
-src.utilities.serialize module
-------------------------------
+samgis.utilities.serialize module
+---------------------------------
 
-.. automodule:: src.utilities.serialize
+.. automodule:: samgis.utilities.serialize
    :members:
    :undoc-members:
    :show-inheritance:
 
-src.utilities.type\_hints module
---------------------------------
+samgis.utilities.type\_hints module
+-----------------------------------
 
-.. automodule:: src.utilities.type_hints
+.. automodule:: samgis.utilities.type_hints
    :members:
    :undoc-members:
    :show-inheritance:
 
-src.utilities.utilities module
-------------------------------
+samgis.utilities.utilities module
+---------------------------------
 
-.. automodule:: src.utilities.utilities
+.. automodule:: samgis.utilities.utilities
    :members:
    :undoc-members:
    :show-inheritance:
@@ -39,7 +39,7 @@ src.utilities.utilities module
 Module contents
 ---------------
 
-.. automodule:: src.utilities
+.. automodule:: samgis.utilities
    :members:
    :undoc-members:
    :show-inheritance:

pyproject.toml

@@ -0,0 +1,30 @@
+[build-system]
+requires = ["hatchling", "hatch-requirements-txt"]
+build-backend = "hatchling.build"
+
+[project]
+name = "samgis"
+version = "1.0.0"
+authors = [
+  { name="Alessandro Trinca Tornidor", email="alessandro@trinca.tornidor.com" },
+]
+description = "A backend for machine learning instance segmentation on geospatial data even without dedicated graphics cards."
+readme = "README.md"
+requires-python = ">=3.11"
+classifiers = [
+    "Programming Language :: Python :: 3",
+    "License :: OSI Approved :: MIT License",
+    "Operating System :: OS Independent",
+]
+dynamic = ["dependencies", "optional-dependencies"]
+
+[project.urls]
+Homepage = "https://github.com/trincadev/samgis-be"
+Issues = "https://github.com/trincadev/samgis-be/issues"
+
+[tool.hatch.metadata.hooks.requirements_txt]
+files = ["requirements_dockerfile.txt"]
+
+[tool.hatch.metadata.hooks.requirements_txt.optional-dependencies]
+dev = ["requirements_dev.txt"]
+docs = ["requirements.txt"]

pytest.ini

@@ -3,5 +3,5 @@ env_override_existing_values = 1
 env_files =
     test/.test.env
 [path]
-source = src
-omit = ./venv/*,*tests*,*apps.py,*manage.py,*__init__.py,*migrations*,*asgi*,*wsgi*,*admin.py,*urls.py,./tests/*
+source = samgis
+omit = ./venv/*,*tests*,*apps.py,*manage.py,*__init__.py,*migrations*,*asgi*,*wsgi*,*admin.py,*urls.py,./tests/*

requirements_dev.txt

@@ -1,12 +1,13 @@
 aws-lambda-powertools
 awslambdaric
 bson
+contextily
 geopandas
 jmespath
-matplotlib
+myst-parser
 numpy
 onnxruntime
-opencv-python
+opencv-python-headless
 pillow
 pydantic>=2.0.3
 pytest

{src → samgis}/__init__.py

@@ -1,10 +1,10 @@
 """Get machine learning predictions from geodata raster images"""
 from aws_lambda_powertools import Logger
-# not used here but contextily_tile is imported in src.io.tms2geotiff
+# not used here but contextily_tile is imported in samgis.io.tms2geotiff
 from contextily import tile as contextily_tile
 from pathlib import Path
 
-from src.utilities.constants import SERVICE_NAME
+from samgis.utilities.constants import SERVICE_NAME
 
 
 PROJECT_ROOT_FOLDER = Path(globals().get("__file__", "./_")).absolute().parent.parent

{src → samgis}/io/coordinates_pixel_conversion.py

@@ -1,8 +1,8 @@
 """functions useful to convert to/from latitude-longitude coordinates to pixel image coordinates"""
-from src import app_logger
-from src.utilities.constants import TILE_SIZE, EARTH_EQUATORIAL_RADIUS
-from src.utilities.type_hints import ImagePixelCoordinates, tuple_float, tuple_float_any
-from src.utilities.type_hints import LatLngDict
+from samgis import app_logger
+from samgis.utilities.constants import TILE_SIZE, EARTH_EQUATORIAL_RADIUS
+from samgis.utilities.type_hints import ImagePixelCoordinates, tuple_float, tuple_float_any
+from samgis.utilities.type_hints import LatLngDict
 
 
 def _get_latlng2pixel_projection(latlng: LatLngDict) -> ImagePixelCoordinates:

{src → samgis}/io/geo_helpers.py

@@ -2,8 +2,8 @@
 from affine import Affine
 from numpy import ndarray as np_ndarray
 
-from src import app_logger
-from src.utilities.type_hints import list_float, tuple_float, dict_str_int
+from samgis import app_logger
+from samgis.utilities.type_hints import list_float, tuple_float, dict_str_int
 
 
 def load_affine_transformation_from_matrix(matrix_source_coefficients: list_float) -> Affine:

{src → samgis}/io/lambda_helpers.py

@@ -3,11 +3,11 @@ from typing import Dict
 from xyzservices import providers
 from aws_lambda_powertools.event_handler import content_types
 
-from src import app_logger
-from src.io.coordinates_pixel_conversion import get_latlng_to_pixel_coordinates
-from src.utilities.constants import CUSTOM_RESPONSE_MESSAGES
-from src.utilities.type_hints import ApiRequestBody
-from src.utilities.utilities import base64_decode
+from samgis import app_logger
+from samgis.io.coordinates_pixel_conversion import get_latlng_to_pixel_coordinates
+from samgis.utilities.constants import CUSTOM_RESPONSE_MESSAGES
+from samgis.utilities.type_hints import ApiRequestBody
+from samgis.utilities.utilities import base64_decode
 
 
 def get_response(status: int, start_time: float, request_id: str, response_body: Dict = None) -> str:
@@ -154,7 +154,7 @@ def get_parsed_request_body(event: Dict or str) -> ApiRequestBody:
 
 
 def get_url_tile(source_type: str):
-    from src.utilities.constants import DEFAULT_TMS_NAME, DEFAULT_TMS_NAME_SHORT
+    from samgis.utilities.constants import DEFAULT_TMS_NAME, DEFAULT_TMS_NAME_SHORT
 
     if source_type.lower() == DEFAULT_TMS_NAME_SHORT:
         return providers.query_name(DEFAULT_TMS_NAME)

{src → samgis}/io/lambda_wrapper.py

@@ -5,9 +5,9 @@ from typing import Dict
 from aws_lambda_powertools.utilities.typing import LambdaContext
 from pydantic import ValidationError
 
-from src import app_logger
-from src.io.lambda_helpers import get_parsed_request_body, get_parsed_bbox_points, get_response
-from src.prediction_api.predictors import samexporter_predict
+from samgis import app_logger
+from samgis.io.lambda_helpers import get_parsed_request_body, get_parsed_bbox_points, get_response
+from samgis.prediction_api.predictors import samexporter_predict
 
 
 def lambda_handler(event: Dict, context: LambdaContext) -> str:

{src → samgis}/io/tms2geotiff.py

@@ -2,10 +2,10 @@ import os
 from numpy import ndarray
 from xyzservices import TileProvider
 
-from src import app_logger
-from src.utilities.constants import (OUTPUT_CRS_STRING, DRIVER_RASTERIO_GTIFF, N_MAX_RETRIES, N_CONNECTION, N_WAIT,
-                                     ZOOM_AUTO, BOOL_USE_CACHE)
-from src.utilities.type_hints import tuple_ndarray_transform, tuple_float
+from samgis import app_logger
+from samgis.utilities.constants import (OUTPUT_CRS_STRING, DRIVER_RASTERIO_GTIFF, N_MAX_RETRIES, N_CONNECTION, N_WAIT,
+                                        ZOOM_AUTO, BOOL_USE_CACHE)
+from samgis.utilities.type_hints import tuple_ndarray_transform, tuple_float
 
 bool_use_cache = int(os.getenv("BOOL_USE_CACHE", BOOL_USE_CACHE))
 n_connection = int(os.getenv("N_CONNECTION", N_CONNECTION))
@@ -48,8 +48,8 @@ def download_extent(w: float, s: float, e: float, n: float, zoom: int or str = z
         parsed request input
     """
     try:
-        from src import contextily_tile
-        from src.io.coordinates_pixel_conversion import _from4326_to3857
+        from samgis import contextily_tile
+        from samgis.io.coordinates_pixel_conversion import _from4326_to3857
 
         app_logger.info(f"connection number:{n_connections}, type:{type(n_connections)}.")
         app_logger.info(f"zoom:{zoom}, type:{type(zoom)}.")

{src → samgis}/prediction_api/predictors.py

@@ -1,12 +1,12 @@
 """functions using machine learning instance model(s)"""
 from numpy import array as np_array, uint8, zeros, ndarray
 
-from src import app_logger, MODEL_FOLDER
-from src.io.geo_helpers import get_vectorized_raster_as_geojson
-from src.io.tms2geotiff import download_extent
-from src.prediction_api.sam_onnx import SegmentAnythingONNX
-from src.utilities.constants import MODEL_ENCODER_NAME, MODEL_DECODER_NAME, DEFAULT_TMS
-from src.utilities.type_hints import llist_float, dict_str_int, list_dict, tuple_ndarr_int, PIL_Image
+from samgis import app_logger, MODEL_FOLDER
+from samgis.io.geo_helpers import get_vectorized_raster_as_geojson
+from samgis.io.tms2geotiff import download_extent
+from samgis.prediction_api.sam_onnx import SegmentAnythingONNX
+from samgis.utilities.constants import MODEL_ENCODER_NAME, MODEL_DECODER_NAME, DEFAULT_TMS
+from samgis.utilities.type_hints import llist_float, dict_str_int, list_dict, tuple_ndarr_int, PIL_Image
 
 models_dict = {"fastsam": {"instance": None}}
 

{src → samgis}/prediction_api/sam_onnx.py

@@ -28,7 +28,7 @@ from numpy import array as np_array, concatenate, float32, linalg, matmul, ndarr
 from cv2 import INTER_LINEAR, warpAffine
 from onnxruntime import get_available_providers, InferenceSession
 
-from src import app_logger
+from samgis import app_logger
 
 
 class SegmentAnythingONNX:

{src → samgis}/utilities/serialize.py

@@ -1,8 +1,8 @@
 """Serialize objects"""
 from typing import Mapping
 
-from src import app_logger
-from src.utilities.type_hints import dict_str, dict_str_any
+from samgis import app_logger
+from samgis.utilities.type_hints import dict_str, dict_str_any
 
 
 def serialize(obj: any, include_none: bool = False):

{src → samgis}/utilities/type_hints.py

@@ -7,7 +7,7 @@ from affine import Affine
 from numpy import ndarray
 from pydantic import BaseModel
 
-from src.utilities.constants import DEFAULT_TMS
+from samgis.utilities.constants import DEFAULT_TMS
 
 
 dict_str_int = dict[str, int]

{src → samgis}/utilities/utilities.py

@@ -1,6 +1,6 @@
 """Various utilities (logger, time benchmark, args dump, numerical and stats info)"""
-from src import app_logger
-from src.utilities.serialize import serialize
+from samgis import app_logger
+from samgis.utilities.serialize import serialize
 
 
 def _prepare_base64_input(sb):

tests/__init__.py

@@ -1,4 +1,4 @@
-from src import PROJECT_ROOT_FOLDER
+from samgis import PROJECT_ROOT_FOLDER
 
 
 TEST_ROOT_FOLDER = PROJECT_ROOT_FOLDER / "tests"

tests/io/test_coordinates_pixel_conversion.py

@@ -1,8 +1,8 @@
 import json
 
-from src.io.coordinates_pixel_conversion import _get_latlng2pixel_projection, _get_point_latlng_to_pixel_coordinates, \
+from samgis.io.coordinates_pixel_conversion import _get_latlng2pixel_projection, _get_point_latlng_to_pixel_coordinates, \
     get_latlng_to_pixel_coordinates
-from src.utilities.type_hints import LatLngDict
+from samgis.utilities.type_hints import LatLngDict
 from tests import TEST_EVENTS_FOLDER
 
 

tests/io/test_geo_helpers.py

@@ -4,7 +4,7 @@ import unittest
 import numpy as np
 import shapely
 
-from src.io.geo_helpers import load_affine_transformation_from_matrix
+from samgis.io.geo_helpers import load_affine_transformation_from_matrix
 from tests import TEST_EVENTS_FOLDER
 
 
@@ -64,7 +64,7 @@ class TestGeoHelpers(unittest.TestCase):
 
     def test_get_vectorized_raster_as_geojson_ok(self):
         from rasterio.transform import Affine
-        from src.io.geo_helpers import get_vectorized_raster_as_geojson
+        from samgis.io.geo_helpers import get_vectorized_raster_as_geojson
 
         name_fn = "samexporter_predict"
 
@@ -82,7 +82,7 @@ class TestGeoHelpers(unittest.TestCase):
                 assert shapely.equals_exact(output_geojson, expected_output_geojson, tolerance=0.000006)
 
     def test_get_vectorized_raster_as_geojson_fail(self):
-        from src.io.geo_helpers import get_vectorized_raster_as_geojson
+        from samgis.io.geo_helpers import get_vectorized_raster_as_geojson
 
         name_fn = "samexporter_predict"
 

tests/io/test_lambda_helpers.py

@@ -3,10 +3,10 @@ import time
 from http import HTTPStatus
 from unittest.mock import patch
 
-from src.io import lambda_helpers
-from src.io.lambda_helpers import get_parsed_bbox_points, get_parsed_request_body, get_response
-from src.utilities.type_hints import ApiRequestBody
-from src.utilities import utilities
+from samgis.io import lambda_helpers
+from samgis.io.lambda_helpers import get_parsed_bbox_points, get_parsed_request_body, get_response
+from samgis.utilities.type_hints import ApiRequestBody
+from samgis.utilities import utilities
 from tests import TEST_EVENTS_FOLDER
 
 
@@ -92,7 +92,7 @@ def test_get_parsed_request_body():
 @patch.object(lambda_helpers, "providers")
 def test_get_url_tile(providers_mocked):
     import xyzservices
-    from src.io.lambda_helpers import get_url_tile
+    from samgis.io.lambda_helpers import get_url_tile
 
     from tests import LOCAL_URL_TILE
 
@@ -112,7 +112,7 @@ def test_get_url_tile(providers_mocked):
 
 
 def test_get_url_tile_real():
-    from src.io.lambda_helpers import get_url_tile
+    from samgis.io.lambda_helpers import get_url_tile
 
     assert get_url_tile("OpenStreetMap") == {
         'url': 'https://tile.openstreetmap.org/{z}/{x}/{y}.png', 'max_zoom': 19,

tests/io/test_tms2geotiff.py

@@ -2,9 +2,9 @@ import unittest
 
 import numpy as np
 
-from src import app_logger
-from src.io.tms2geotiff import download_extent
-from src.utilities.utilities import hash_calculate
+from samgis import app_logger
+from samgis.io.tms2geotiff import download_extent
+from samgis.utilities.utilities import hash_calculate
 from tests import LOCAL_URL_TILE, TEST_EVENTS_FOLDER
 
 input_bbox = [[39.036252959636606, 15.040283203125002], [38.302869955150044, 13.634033203125002]]

tests/prediction_api/test_predictors.py

@@ -3,8 +3,8 @@ from unittest.mock import patch
 
 import numpy as np
 
-from src.prediction_api import predictors
-from src.prediction_api.predictors import get_raster_inference, samexporter_predict
+from samgis.prediction_api import predictors
+from samgis.prediction_api.predictors import get_raster_inference, samexporter_predict
 from tests import TEST_EVENTS_FOLDER
 
 

tests/prediction_api/test_sam_onnx.py

@@ -3,10 +3,10 @@ import unittest
 
 import numpy as np
 
-from src import MODEL_FOLDER
-from src.prediction_api.sam_onnx import SegmentAnythingONNX
-from src.utilities.constants import MODEL_ENCODER_NAME, MODEL_DECODER_NAME
-from src.utilities.utilities import hash_calculate
+from samgis import MODEL_FOLDER
+from samgis.prediction_api.sam_onnx import SegmentAnythingONNX
+from samgis.utilities.constants import MODEL_ENCODER_NAME, MODEL_DECODER_NAME
+from samgis.utilities.utilities import hash_calculate
 from tests import TEST_EVENTS_FOLDER
 
 

tests/test_app.py

@@ -5,7 +5,7 @@ from unittest.mock import patch
 
 from awslambdaric.lambda_context import LambdaContext
 
-from src.io import lambda_helpers, lambda_wrapper
+from samgis.io import lambda_helpers, lambda_wrapper
 from tests.local_tiles_http_server import LocalTilesHttpServer
 
 
@@ -21,7 +21,7 @@ class TestAppFailures(unittest.TestCase):
             samexporter_predict_mocked,
             time_mocked
     ):
-        from src.io.lambda_wrapper import lambda_handler
+        from samgis.io.lambda_wrapper import lambda_handler
 
         time_mocked.return_value = 0
         get_parsed_request_body_mocked.value = {}
@@ -44,7 +44,7 @@ class TestAppFailures(unittest.TestCase):
     @patch.object(time, "time")
     @patch.object(lambda_wrapper, "get_parsed_request_body")
     def test_lambda_handler_400(self, get_parsed_request_body_mocked, time_mocked):
-        from src.io.lambda_wrapper import lambda_handler
+        from samgis.io.lambda_wrapper import lambda_handler
 
         time_mocked.return_value = 0
         get_parsed_request_body_mocked.return_value = {}
@@ -64,7 +64,7 @@ class TestAppFailures(unittest.TestCase):
 
     @patch.object(time, "time")
     def test_lambda_handler_422(self, time_mocked):
-        from src.io.lambda_wrapper import lambda_handler
+        from samgis.io.lambda_wrapper import lambda_handler
 
         time_mocked.return_value = 0
         event = {"body": {}, "version": 1.0}
@@ -95,7 +95,7 @@ class TestAppFailures(unittest.TestCase):
             samexporter_predict_mocked,
             time_mocked
     ):
-        from src.io.lambda_wrapper import lambda_handler
+        from samgis.io.lambda_wrapper import lambda_handler
         from tests import TEST_EVENTS_FOLDER
 
         time_mocked.return_value = 0
@@ -145,7 +145,7 @@ class TestAppFailures(unittest.TestCase):
         import xyzservices
         import shapely
 
-        from src.io.lambda_wrapper import lambda_handler
+        from samgis.io.lambda_wrapper import lambda_handler
         from tests import LOCAL_URL_TILE, TEST_EVENTS_FOLDER
 
         local_tile_provider = xyzservices.TileProvider(name="local_tile_provider", url=LOCAL_URL_TILE, attribution="")
@@ -190,7 +190,7 @@ class TestAppFailures(unittest.TestCase):
                 assert len(output_geojson.geoms) == expected_response_body["n_shapes_geojson"]
 
     def test_debug(self):
-        from src.io.lambda_wrapper import lambda_handler
+        from samgis.io.lambda_wrapper import lambda_handler
 
         input_event = {
             'bbox': {

tests/utilities/test_serialize.py

@@ -2,7 +2,7 @@ import unittest
 
 import numpy as np
 
-from src.utilities.serialize import serialize
+from samgis.utilities.serialize import serialize
 
 test_dict_list_dict = {
     "type": "FeatureCollection",