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alessandro trinca tornidor
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Commit
•
0914710
1
Parent(s):
b00385f
[feat] prepare entire docker build with nvidia GPU on hf space cloning https://huggingface.co/spaces/aletrn/samgis
Browse filesThis view is limited to 50 files because it contains too many changes.
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- .coveragerc +9 -0
- .dockerignore +16 -0
- .gitignore +278 -0
- .idea/.gitignore +3 -0
- .idea/inspectionProfiles/profiles_settings.xml +6 -0
- .idea/vcs.xml +6 -0
- Dockerfile +173 -0
- LICENSE.txt +21 -0
- README.md +124 -4
- dockerfiles/apt_preferences_debian +9 -0
- dockerfiles/apt_preferences_ubuntu +9 -0
- dockerfiles/debian.sources +17 -0
- dockerfiles/dockerfile-fastapi-fastsam-api +1 -0
- dockerfiles/dockerfile-lambda-fastsam-api +36 -0
- dockerfiles/dockerfile-lisa-base +140 -0
- dockerfiles/dockerfile-lisa-predictions +45 -0
- dockerfiles/dockerfile-samgis-base +132 -0
- dockerfiles/ubuntu.sources +18 -0
- docs/.gitignore +0 -0
- docs/Changelog.md +37 -0
- docs/Makefile +20 -0
- docs/_static/.gitignore +0 -0
- docs/brief_project_presentation.md +20 -0
- docs/conf.py +72 -0
- docs/external_links.rst +5 -0
- docs/external_links_md.md +2 -0
- docs/index.rst +27 -0
- docs/make.bat +35 -0
- docs/modules.rst +7 -0
- docs/openapi.rst +11 -0
- docs/other_resources.rst +9 -0
- docs/samgis.io.rst +53 -0
- docs/samgis.prediction_api.rst +21 -0
- docs/samgis.rst +20 -0
- docs/samgis.utilities.rst +29 -0
- docs/specs/openapi.yaml +177 -0
- events/colico_point_rectangle_output.json +1 -0
- events/colico_prompt1.json +5 -0
- events/example_output.json +19 -0
- events/payload_lisa_teglio.json +5 -0
- events/payload_multiprompt_api_request_body.json +48 -0
- events/payload_multiprompt_api_response_body_failure.json +1 -0
- events/payload_multiprompt_api_response_body_success.json +8 -0
- events/payload_point.json +14 -0
- events/payload_point2.json +14 -0
- events/payload_point_eolie.json +24 -0
- events/payload_point_error_int_str.json +62 -0
- events/payload_point_rectangle_colico.json +48 -0
- events/payload_rectangle.json +12 -0
- events/payloads_body_base64.json +52 -0
.coveragerc
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[run]
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source = samgis
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omit = ./venv/*,__version__.py,*tests*,*apps.py,*manage.py,*__init__.py,*migrations*,*asgi*,*wsgi*,*admin.py,*urls.py,./tests/*
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[report]
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omit = ./venv/*,*tests*,*apps.py,*manage.py,*__init__.py,*migrations*,*asgi*,*wsgi*,*admin.py,*urls.py,./tests/*
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exclude_lines =
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static/dist
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.coverage
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.git
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# Created by https://www.gitignore.io/api/osx,linux,python,windows,pycharm,visualstudiocode
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### Linux ###
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*~
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# temporary files which can be created if a process still has a handle open of a deleted file
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.fuse_hidden*
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# KDE directory preferences
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.directory
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# Linux trash folder which might appear on any partition or disk
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.Trash-*
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# .nfs files are created when an open file is removed but is still being accessed
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.nfs*
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*.DS_Store
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.AppleDouble
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.LSOverride
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Icon
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._*
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# Files that might appear in the root of a volume
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.DocumentRevisions-V100
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.fseventsd
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.Spotlight-V100
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.VolumeIcon.icns
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.com.apple.timemachine.donotpresent
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# Directories potentially created on remote AFP share
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.AppleDB
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.AppleDesktop
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Network Trash Folder
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Temporary Items
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.apdisk
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# CMake
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cmake-build-debug/
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# Ruby plugin and RubyMine
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/.rakeTasks
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# Crashlytics plugin (for Android Studio and IntelliJ)
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com_crashlytics_export_strings.xml
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crashlytics.properties
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crashlytics-build.properties
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fabric.properties
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### Python ###
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# Byte-compiled / optimized / DLL files
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__pycache__/
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*.py[cod]
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*$py.class
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# C extensions
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*.so
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.Python
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build/
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develop-eggs/
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dist/
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downloads/
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eggs/
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.eggs/
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lib/
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lib64/
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parts/
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sdist/
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var/
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wheels/
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*.egg-info/
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.installed.cfg
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*.egg
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# PyInstaller
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# Usually these files are written by a python script from a template
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# before PyInstaller builds the exe, so as to inject date/other infos into it.
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*.manifest
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*.spec
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# Installer logs
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pip-log.txt
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pip-delete-this-directory.txt
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# Unit test / coverage reports
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htmlcov/
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.tox/
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.coverage
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.coverage.*
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.cache
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nosetests.xml
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coverage.xml
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*.cover
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.hypothesis/
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# Translations
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*.mo
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*.pot
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instance/
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.webassets-cache
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.scrapy
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docs/_build/doctrees/*
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docs/_build/html/*
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# PyBuilder
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target/
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# Jupyter Notebook
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.ipynb_checkpoints
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.python-version
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# celery beat schedule file
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celerybeat-schedule.*
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*.sage.py
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# Environments
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.env
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.env*
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.venv
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env/
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venv/
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ENV/
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env.bak/
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venv.bak/
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# Spyder project settings
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.spyderproject
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.spyproject
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# Rope project settings
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.ropeproject
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# mkdocs documentation
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/site
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# mypy
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.mypy_cache/
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### VisualStudioCode ###
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.vscode/*
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!.vscode/settings.json
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!.vscode/tasks.json
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!.vscode/launch.json
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.history
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### Windows ###
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# Windows thumbnail cache files
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Thumbs.db
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ehthumbs.db
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ehthumbs_vista.db
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# Folder config file
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Desktop.ini
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# Recycle Bin used on file shares
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$RECYCLE.BIN/
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# Windows Installer files
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*.cab
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*.msi
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*.msm
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*.msp
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# Windows shortcuts
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*.lnk
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# Build folder
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*/build/*
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# custom
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*.ori
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tmp
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nohup.out
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/tests/events.tar
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function_dump_*.json
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# onnx models
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*.onnx
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# End of https://www.gitignore.io/api/osx,linux,python,windows,pycharm,visualstudiocode
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## .idea files
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# Covers JetBrains IDEs: IntelliJ, RubyMine, PhpStorm, AppCode, PyCharm, CLion, Android Studio and WebStorm
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# Reference: https://intellij-support.jetbrains.com/hc/en-us/articles/206544839
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# User-specific stuff
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.idea/**/dictionaries
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# Generated files
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.idea/**/contentModel.xml
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# Sensitive or high-churn files
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# Gradle
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.idea/**/gradle.xml
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.idea/**/libraries
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# Gradle and Maven with auto-import
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# When using Gradle or Maven with auto-import, you should exclude module files,
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# since they will be recreated, and may cause churn. Uncomment if using
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# auto-import.
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# .idea/modules.xml
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.idea/*.iml
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# .idea/modules
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# CMake
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cmake-build-*/
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# Mongo Explorer plugin
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# File-based project format
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*.iws
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# IntelliJ
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out/
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# mpeltonen/sbt-idea plugin
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# JIRA plugin
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# Cursive Clojure plugin
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# Crashlytics plugin (for Android Studio and IntelliJ)
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com_crashlytics_export_strings.xml
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crashlytics.properties
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264 |
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crashlytics-build.properties
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fabric.properties
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# Editor-based Rest Client
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.idea/httpRequests
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# Android studio 3.1+ serialized cache file
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# Sonarlint plugin
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# node_modules
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node_modules
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.idea/.gitignore
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# Default ignored files
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/shelf/
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/workspace.xml
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4 |
+
<mapping directory="" vcs="Git" />
|
5 |
+
</component>
|
6 |
+
</project>
|
Dockerfile
ADDED
@@ -0,0 +1,173 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
# Include global ARGs at the dockerfile top
|
2 |
+
ARG ARCH="x86_64"
|
3 |
+
ARG LAMBDA_TASK_ROOT="/var/task"
|
4 |
+
ARG FASTAPI_STATIC="${LAMBDA_TASK_ROOT}/static"
|
5 |
+
ARG PYTHONPATH="${LAMBDA_TASK_ROOT}:${PYTHONPATH}:/usr/local/lib/python3/dist-packages"
|
6 |
+
ARG POETRY_NO_INTERACTION=1
|
7 |
+
ARG POETRY_VIRTUALENVS_IN_PROJECT=1
|
8 |
+
ARG POETRY_VIRTUALENVS_CREATE=1
|
9 |
+
ARG POETRY_CACHE_DIR=/tmp/poetry_cache
|
10 |
+
|
11 |
+
|
12 |
+
FROM nvcr.io/nvidia/pytorch:24.01-py3 as builder_global
|
13 |
+
|
14 |
+
LABEL authors="alessandro@trinca.tornidor.com"
|
15 |
+
|
16 |
+
ARG ARCH
|
17 |
+
ARG LAMBDA_TASK_ROOT
|
18 |
+
ARG PYTHONPATH
|
19 |
+
ARG POETRY_NO_INTERACTION
|
20 |
+
ARG POETRY_VIRTUALENVS_IN_PROJECT
|
21 |
+
ARG POETRY_VIRTUALENVS_CREATE
|
22 |
+
ARG POETRY_CACHE_DIR
|
23 |
+
ARG DEPENDENCY_GROUP
|
24 |
+
|
25 |
+
RUN echo "ARCH: $ARCH ..."
|
26 |
+
|
27 |
+
RUN echo "ARG POETRY_CACHE_DIR: ${POETRY_CACHE_DIR} ..."
|
28 |
+
RUN echo "ARG PYTHONPATH: $PYTHONPATH ..."
|
29 |
+
RUN test -n ${DEPENDENCY_GROUP:?}
|
30 |
+
RUN echo "python DEPENDENCY_GROUP: ${DEPENDENCY_GROUP} ..."
|
31 |
+
RUN echo "arg dep:"
|
32 |
+
|
33 |
+
# Set working directory to function root directory
|
34 |
+
WORKDIR ${LAMBDA_TASK_ROOT}
|
35 |
+
COPY requirements_poetry.txt pyproject.toml poetry.lock README.md ${LAMBDA_TASK_ROOT}/
|
36 |
+
|
37 |
+
RUN cat /etc/lsb-release
|
38 |
+
# avoid segment-geospatial exception caused by missing libGL.so.1 library
|
39 |
+
RUN echo "BUILDER: check libz.s* before start" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
40 |
+
|
41 |
+
RUN apt update && apt upgrade -y && apt install -y libgl1 curl python3-pip git-lfs && apt clean
|
42 |
+
COPY ./dockerfiles/apt_preferences_ubuntu /etc/apt/preferences
|
43 |
+
COPY ./dockerfiles/ubuntu.sources /etc/apt/sources.list.d/ubuntu.sources
|
44 |
+
#RUN echo "run update noble..."
|
45 |
+
#RUN apt update
|
46 |
+
#RUN apt update && apt install -t noble zlib1g -y
|
47 |
+
RUN git lfs install
|
48 |
+
RUN echo "BUILDER: check libz.s* after install from trixie" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
49 |
+
|
50 |
+
RUN ls -l /etc/apt/sources* /etc/apt/preferences*
|
51 |
+
|
52 |
+
# poetry installation path is NOT within ${LAMBDA_TASK_ROOT}: not needed for runtime docker image
|
53 |
+
RUN python -m pip install -r ${LAMBDA_TASK_ROOT}/requirements_poetry.txt
|
54 |
+
|
55 |
+
RUN which poetry && poetry --version && poetry config --list
|
56 |
+
RUN poetry config virtualenvs.path ${LAMBDA_TASK_ROOT}
|
57 |
+
RUN poetry config installer.max-workers 7
|
58 |
+
RUN echo "# poetry config --list #" && poetry config --list
|
59 |
+
RUN ls -ld ${LAMBDA_TASK_ROOT}/
|
60 |
+
#RUN . ${LAMBDA_TASK_ROOT}/.venv/bin/activate && ${LAMBDA_TASK_ROOT}/.venv/bin/python --version && ${LAMBDA_TASK_ROOT}/.venv/bin/python -m pip install pip wheel setuptools --upgrade
|
61 |
+
RUN poetry run python -m pip install pip wheel setuptools --upgrade
|
62 |
+
RUN poetry install --with ${DEPENDENCY_GROUP} --no-root -vvv
|
63 |
+
|
64 |
+
|
65 |
+
FROM nvcr.io/nvidia/pytorch:24.01-py3 as runtime
|
66 |
+
|
67 |
+
ARG ARCH
|
68 |
+
ARG LAMBDA_TASK_ROOT
|
69 |
+
|
70 |
+
ENV VIRTUAL_ENV=${LAMBDA_TASK_ROOT}/.venv \
|
71 |
+
PATH="${LAMBDA_TASK_ROOT}/.venv/bin:$PATH"
|
72 |
+
|
73 |
+
RUN echo "COPY --from=builder_global /usr/lib/${ARCH}-linux-gnu/libGL.so* /usr/lib/${ARCH}-linux-gnu/"
|
74 |
+
COPY --from=builder_global /usr/lib/${ARCH}-linux-gnu/libGL.so* /usr/lib/${ARCH}-linux-gnu/
|
75 |
+
RUN echo "RUNTIME: check libz.s* before upgrade" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
76 |
+
RUN echo "RUNTIME: remove libz.s* to force upgrade" && rm /usr/lib/${ARCH}-linux-gnu/libz.so*
|
77 |
+
COPY --from=builder_global /usr/lib/${ARCH}-linux-gnu/libz.so* /usr/lib/${ARCH}-linux-gnu/
|
78 |
+
RUN echo "RUNTIME: check libz.s* after copy" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
79 |
+
COPY --from=builder_global ${LAMBDA_TASK_ROOT}/.venv ${LAMBDA_TASK_ROOT}/.venv
|
80 |
+
|
81 |
+
RUN echo "new LAMBDA_TASK_ROOT after hidden venv copy => ${LAMBDA_TASK_ROOT}"
|
82 |
+
RUN ls -ld ${LAMBDA_TASK_ROOT}/
|
83 |
+
RUN ls -lA ${LAMBDA_TASK_ROOT}/
|
84 |
+
|
85 |
+
|
86 |
+
### conditional section
|
87 |
+
FROM node:20-slim AS node_fastapi
|
88 |
+
|
89 |
+
ARG DEPENDENCY_GROUP
|
90 |
+
ENV PNPM_HOME="/pnpm"
|
91 |
+
ENV PATH="$PNPM_HOME:$PATH"
|
92 |
+
|
93 |
+
RUN corepack enable
|
94 |
+
|
95 |
+
COPY ./static /appnode
|
96 |
+
WORKDIR /appnode
|
97 |
+
# RUN if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then echo "pnpm store path:" && pnpm store path; fi
|
98 |
+
|
99 |
+
|
100 |
+
FROM node_fastapi AS node_prod_deps
|
101 |
+
|
102 |
+
ARG DEPENDENCY_GROUP
|
103 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then \
|
104 |
+
pnpm install --prod --frozen-lockfile; else \
|
105 |
+
echo "DEPENDENCY_GROUP 1: ${DEPENDENCY_GROUP} ..."; fi
|
106 |
+
# here multiple conditions concatenated to avoid failing on check
|
107 |
+
RUN if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then if [ ! -d /appnode/node_modules ]; then echo "no node_modules folder" && exit 1; fi; fi
|
108 |
+
|
109 |
+
|
110 |
+
FROM node_fastapi AS node_build
|
111 |
+
|
112 |
+
ARG DEPENDENCY_GROUP
|
113 |
+
ARG VITE__MAP_DESCRIPTION
|
114 |
+
ARG VITE__SAMGIS_SPACE
|
115 |
+
RUN echo "VITE__MAP_DESCRIPTION:" ${VITE__MAP_DESCRIPTION}
|
116 |
+
RUN echo "VITE__SAMGIS_SPACE:" ${VITE__SAMGIS_SPACE}
|
117 |
+
|
118 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then \
|
119 |
+
pnpm install --frozen-lockfile; else \
|
120 |
+
echo "DEPENDENCY_GROUP 2: ${DEPENDENCY_GROUP} ..."; fi
|
121 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then pnpm build; fi
|
122 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then \
|
123 |
+
pnpm tailwindcss -i /appnode/src/input.css -o /appnode/dist/output.css; fi
|
124 |
+
RUN if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then if [ ! -d /appnode/dist ]; then echo "no dist folder" && exit 1; fi; fi
|
125 |
+
|
126 |
+
|
127 |
+
FROM runtime
|
128 |
+
ARG FASTAPI_STATIC
|
129 |
+
RUN mkdir ${FASTAPI_STATIC}
|
130 |
+
|
131 |
+
COPY ./machine_learning_models ${LAMBDA_TASK_ROOT}/machine_learning_models
|
132 |
+
COPY --from=node_prod_deps /appnode/node_modules* ${FASTAPI_STATIC}/node_modules
|
133 |
+
COPY --from=node_build /appnode/dist* ${FASTAPI_STATIC}/dist
|
134 |
+
|
135 |
+
|
136 |
+
# Include global arg in this stage of the build
|
137 |
+
ARG LAMBDA_TASK_ROOT="/var/task"
|
138 |
+
ARG PYTHONPATH="${LAMBDA_TASK_ROOT}:${PYTHONPATH}:/usr/local/lib/python3/dist-packages"
|
139 |
+
ENV VIRTUAL_ENV=${LAMBDA_TASK_ROOT}/.venv \
|
140 |
+
PATH="${LAMBDA_TASK_ROOT}/.venv/bin:$PATH"
|
141 |
+
ENV IS_AWS_LAMBDA=""
|
142 |
+
|
143 |
+
# Set working directory to function root directory
|
144 |
+
WORKDIR ${LAMBDA_TASK_ROOT}
|
145 |
+
|
146 |
+
COPY samgis ${LAMBDA_TASK_ROOT}/samgis
|
147 |
+
COPY wrappers ${LAMBDA_TASK_ROOT}/wrappers
|
148 |
+
|
149 |
+
RUN ls -l /usr/bin/which
|
150 |
+
RUN /usr/bin/which python
|
151 |
+
RUN python -v
|
152 |
+
RUN echo "PYTHONPATH: ${PYTHONPATH}."
|
153 |
+
RUN echo "PATH: ${PATH}."
|
154 |
+
RUN echo "LAMBDA_TASK_ROOT: ${LAMBDA_TASK_ROOT}."
|
155 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}
|
156 |
+
RUN ls -ld ${LAMBDA_TASK_ROOT}
|
157 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/machine_learning_models
|
158 |
+
RUN python -c "import sys; print(sys.path)"
|
159 |
+
RUN python -c "import cv2"
|
160 |
+
RUN python -c "import fastapi"
|
161 |
+
RUN python -c "import geopandas"
|
162 |
+
RUN python -c "import loguru"
|
163 |
+
RUN python -c "import onnxruntime"
|
164 |
+
RUN python -c "import rasterio"
|
165 |
+
RUN python -c "import uvicorn"
|
166 |
+
RUN df -h
|
167 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/samgis/
|
168 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/wrappers/
|
169 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/static/
|
170 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/static/dist
|
171 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/static/node_modules
|
172 |
+
|
173 |
+
CMD ["uvicorn", "wrappers.fastapi_wrapper:app", "--host", "0.0.0.0", "--port", "7860"]
|
LICENSE.txt
ADDED
@@ -0,0 +1,21 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
MIT License
|
2 |
+
|
3 |
+
Copyright (c) 2023 Alessandro Trinca Tornidor
|
4 |
+
|
5 |
+
Permission is hereby granted, free of charge, to any person obtaining a copy
|
6 |
+
of this software and associated documentation files (the "Software"), to deal
|
7 |
+
in the Software without restriction, including without limitation the rights
|
8 |
+
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
|
9 |
+
copies of the Software, and to permit persons to whom the Software is
|
10 |
+
furnished to do so, subject to the following conditions:
|
11 |
+
|
12 |
+
The above copyright notice and this permission notice shall be included in all
|
13 |
+
copies or substantial portions of the Software.
|
14 |
+
|
15 |
+
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
|
16 |
+
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
|
17 |
+
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
|
18 |
+
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
|
19 |
+
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
|
20 |
+
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
|
21 |
+
SOFTWARE.
|
README.md
CHANGED
@@ -1,10 +1,130 @@
|
|
1 |
---
|
2 |
-
title:
|
3 |
-
emoji:
|
4 |
-
colorFrom:
|
5 |
colorTo: blue
|
6 |
sdk: docker
|
7 |
pinned: false
|
|
|
8 |
---
|
9 |
|
10 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
---
|
2 |
+
title: SamGIS
|
3 |
+
emoji: 🗺️
|
4 |
+
colorFrom: red
|
5 |
colorTo: blue
|
6 |
sdk: docker
|
7 |
pinned: false
|
8 |
+
license: mit
|
9 |
---
|
10 |
|
11 |
+
## Segment Anything models
|
12 |
+
It's possible to prepare the model files using https://github.com/vietanhdev/samexporter/ or using the ones
|
13 |
+
from https://huggingface.co/aletrn/sam-quantized (copy them within the folder `/machine_learning_models`).
|
14 |
+
|
15 |
+
## SamGIS - HuggingFace version
|
16 |
+
|
17 |
+
The SamGIS HuggingSpace url is https://huggingface.co/spaces/aletrn/samgis.
|
18 |
+
Build the docker image this way:
|
19 |
+
|
20 |
+
```bash
|
21 |
+
# clean any old active containers
|
22 |
+
docker stop $(docker ps -a -q); docker rm $(docker ps -a -q)
|
23 |
+
|
24 |
+
# build the base docker image from the repository root folder using ARGs:
|
25 |
+
# - DEPENDENCY_GROUP=fastapi used by poetry
|
26 |
+
# VITE__MAP_DESCRIPTION, VITE__SAMGIS_SPACE used by 'docker build'
|
27 |
+
(
|
28 |
+
set -o allexport && source <(cat ./static/.env|grep VITE__) && set +o allexport;
|
29 |
+
env|grep VITE__;
|
30 |
+
docker build . -f dockerfiles/dockerfile-samgis-base --progress=plain \
|
31 |
+
--build-arg DEPENDENCY_GROUP=fastapi \
|
32 |
+
--build-arg VITE__MAP_DESCRIPTION=${VITE__MAP_DESCRIPTION} \
|
33 |
+
--build-arg VITE__SAMGIS_SPACE=${VITE__SAMGIS_SPACE} \
|
34 |
+
--tag registry.gitlab.com/aletrn/gis-prediction
|
35 |
+
)
|
36 |
+
|
37 |
+
# build the image, use the tag "samgis-huggingface"
|
38 |
+
docker build . --tag example-docker-namespace/samgis-huggingface --progress=plain
|
39 |
+
```
|
40 |
+
|
41 |
+
Run the container (keep it on background) and show logs
|
42 |
+
|
43 |
+
```bash
|
44 |
+
docker run -d --name samgis-huggingface -p 7860:7860 example-docker-namespace/samgis-huggingface; docker logs -f samgis-huggingface
|
45 |
+
```
|
46 |
+
|
47 |
+
Test it with curl using a json payload:
|
48 |
+
|
49 |
+
```bash
|
50 |
+
URL=http://localhost:7860/infer_samgis
|
51 |
+
curl -d@./events/payload_point_eolie.json -H 'accept: application/json' ${URL}
|
52 |
+
```
|
53 |
+
|
54 |
+
or better visiting the swagger page on http://localhost:7860/docs
|
55 |
+
|
56 |
+
|
57 |
+
## SamGIS - lambda AWS version
|
58 |
+
|
59 |
+
Build the docker image this way:
|
60 |
+
|
61 |
+
```bash
|
62 |
+
# clean any old active containers
|
63 |
+
docker stop $(docker ps -a -q); docker rm $(docker ps -a -q)
|
64 |
+
|
65 |
+
# build the base docker image with the docker aws repository tag
|
66 |
+
docker build . -f dockerfiles/dockerfile-samgis-base --build-arg DEPENDENCY_GROUP=aws_lambda \
|
67 |
+
--tag example-docker-namespace/samgis-base-aws-lambda --progress=plain
|
68 |
+
|
69 |
+
# build the final docker image
|
70 |
+
docker build . -f dockerfiles/dockerfile-lambda-fastsam-api --tag example-docker-namespace/lambda-fastsam-api --progress=plain
|
71 |
+
```
|
72 |
+
|
73 |
+
Run the container (keep it on background) and show logs
|
74 |
+
|
75 |
+
```bash
|
76 |
+
docker run -d --name lambda-fastsam-api -p 8080:8080 lambda-fastsam-api; docker logs -f lambda-fastsam-api
|
77 |
+
```
|
78 |
+
|
79 |
+
Test it with curl using a json payload:
|
80 |
+
|
81 |
+
```bash
|
82 |
+
URL=http://localhost:8080/2015-03-31/functions/function/invocations
|
83 |
+
curl -d@./events/payload_point_eolie.json -H 'accept: application/json' ${URL}
|
84 |
+
```
|
85 |
+
|
86 |
+
### Publish the aws lambda docker image
|
87 |
+
Login on aws ECR with the correct aws profile (change the example `example-docker-namespace/` repository url with the one from
|
88 |
+
the [ECR push command instructions page](https://eu-west-1.console.aws.amazon.com/ecr/repositories/)).
|
89 |
+
|
90 |
+
### Dependencies installation and local tests
|
91 |
+
The docker build process needs only the base dependency group plus the `aws_lambda` or `fastapi` optional one.
|
92 |
+
Install also the `test` and/or `docs` groups if needed.
|
93 |
+
|
94 |
+
### Tests
|
95 |
+
|
96 |
+
Tests are defined in the `tests` folder in this project. Use PIP to install the test dependencies and run tests.
|
97 |
+
|
98 |
+
```bash
|
99 |
+
python -m pytest --cov=samgis --cov-report=term-missing && coverage html
|
100 |
+
```
|
101 |
+
|
102 |
+
### How to update the static documentation with sphinx
|
103 |
+
|
104 |
+
This project documentation uses sphinx-apidoc: it's a tool for automatic generation of Sphinx sources that, using the autodoc
|
105 |
+
extension, document a whole package in the style of other automatic API documentation tools. See the
|
106 |
+
[documentation page](https://www.sphinx-doc.org/en/master/man/sphinx-apidoc.html) for details.
|
107 |
+
Run the command from the project root:
|
108 |
+
|
109 |
+
```bash
|
110 |
+
# missing docs folder (run from project root) initialize this way
|
111 |
+
cd docs && sphinx-quickstart -p SamGIS -r 1.0.0 -l python --master index
|
112 |
+
|
113 |
+
# update docs folder (from project root)
|
114 |
+
sphinx-apidoc -f -o docs samgis
|
115 |
+
```
|
116 |
+
|
117 |
+
Then it's possible to generate the HTML pages
|
118 |
+
|
119 |
+
```bash
|
120 |
+
cd docs && make html && ../
|
121 |
+
|
122 |
+
# to clean old files
|
123 |
+
cd docs && make clean html && cd ../
|
124 |
+
```
|
125 |
+
|
126 |
+
The static documentation it's now ready at the path `docs/_build/html/index.html`.
|
127 |
+
|
128 |
+
To create a work in progress openapi json or yaml file use
|
129 |
+
- `extract-openapi-fastapi.py`
|
130 |
+
- `extract-openapi-lambda.py` (useful to export the json schema request and response from lambda app api)
|
dockerfiles/apt_preferences_debian
ADDED
@@ -0,0 +1,9 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Explanation: Uninstall or do not install any Debian-originated
|
2 |
+
Explanation: package versions other than those in the stable distro
|
3 |
+
Package: *
|
4 |
+
Pin: release a=stable
|
5 |
+
Pin-Priority: 900
|
6 |
+
|
7 |
+
Package: zlib1g
|
8 |
+
Pin: release a=trixie
|
9 |
+
Pin-Priority: -10
|
dockerfiles/apt_preferences_ubuntu
ADDED
@@ -0,0 +1,9 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Explanation: Uninstall or do not install any Debian-originated
|
2 |
+
Explanation: package versions other than those in the stable distro
|
3 |
+
Package: *
|
4 |
+
Pin: release a=stable
|
5 |
+
Pin-Priority: 900
|
6 |
+
|
7 |
+
Package: zlib1g
|
8 |
+
Pin: release a=noble
|
9 |
+
Pin-Priority: -10
|
dockerfiles/debian.sources
ADDED
@@ -0,0 +1,17 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Types: deb deb-src
|
2 |
+
URIs: http://deb.debian.org/debian
|
3 |
+
Suites: bookworm bookworm-updates
|
4 |
+
Components: main
|
5 |
+
Signed-By: /usr/share/keyrings/debian-archive-keyring.gpg
|
6 |
+
|
7 |
+
Types: deb deb-src
|
8 |
+
URIs: http://deb.debian.org/debian-security
|
9 |
+
Suites: bookworm-security
|
10 |
+
Components: main
|
11 |
+
Signed-By: /usr/share/keyrings/debian-archive-keyring.gpg
|
12 |
+
|
13 |
+
Types: deb
|
14 |
+
URIs: http://deb.debian.org/debian
|
15 |
+
Suites: trixie
|
16 |
+
Components: main
|
17 |
+
Signed-By: /usr/share/keyrings/debian-archive-keyring.gpg
|
dockerfiles/dockerfile-fastapi-fastsam-api
ADDED
@@ -0,0 +1 @@
|
|
|
|
|
1 |
+
Dockerfile
|
dockerfiles/dockerfile-lambda-fastsam-api
ADDED
@@ -0,0 +1,36 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
FROM localhost/samgis-base-aws-lambda:latest
|
2 |
+
|
3 |
+
# Include global arg in this stage of the build
|
4 |
+
ARG LAMBDA_TASK_ROOT="/var/task"
|
5 |
+
ARG PYTHONPATH="${LAMBDA_TASK_ROOT}:${PYTHONPATH}:/usr/local/lib/python3/dist-packages"
|
6 |
+
ENV VIRTUAL_ENV=${LAMBDA_TASK_ROOT}/.venv \
|
7 |
+
PATH="${LAMBDA_TASK_ROOT}/.venv/bin:$PATH"
|
8 |
+
ENV IS_AWS_LAMBDA="True"
|
9 |
+
|
10 |
+
# Set working directory to function root directory
|
11 |
+
WORKDIR ${LAMBDA_TASK_ROOT}
|
12 |
+
COPY ./samgis ${LAMBDA_TASK_ROOT}/samgis
|
13 |
+
COPY ./wrappers ${LAMBDA_TASK_ROOT}/wrappers
|
14 |
+
|
15 |
+
RUN ls -l /usr/bin/which
|
16 |
+
RUN /usr/bin/which python
|
17 |
+
RUN python -v
|
18 |
+
RUN echo "PYTHONPATH: ${PYTHONPATH}."
|
19 |
+
RUN echo "PATH: ${PATH}."
|
20 |
+
RUN echo "LAMBDA_TASK_ROOT: ${LAMBDA_TASK_ROOT}."
|
21 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}
|
22 |
+
RUN ls -ld ${LAMBDA_TASK_ROOT}
|
23 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/machine_learning_models
|
24 |
+
RUN python -c "import sys; print(sys.path)"
|
25 |
+
RUN python -c "import awslambdaric"
|
26 |
+
RUN python -c "import cv2"
|
27 |
+
RUN python -c "import geopandas"
|
28 |
+
RUN python -c "import onnxruntime"
|
29 |
+
RUN python -c "import rasterio"
|
30 |
+
RUN df -h
|
31 |
+
RUN ls -l /lambda-entrypoint.sh
|
32 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/samgis/
|
33 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/wrappers/
|
34 |
+
|
35 |
+
ENTRYPOINT ["/lambda-entrypoint.sh"]
|
36 |
+
CMD [ "wrappers.lambda_wrapper.lambda_handler" ]
|
dockerfiles/dockerfile-lisa-base
ADDED
@@ -0,0 +1,140 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
# Include global ARGs at the dockerfile top
|
2 |
+
ARG ARCH="x86_64"
|
3 |
+
ARG LAMBDA_TASK_ROOT="/var/task"
|
4 |
+
ARG FASTAPI_STATIC="${LAMBDA_TASK_ROOT}/static"
|
5 |
+
ARG PYTHONPATH="${LAMBDA_TASK_ROOT}:${PYTHONPATH}:/usr/local/lib/python3/dist-packages"
|
6 |
+
ARG POETRY_NO_INTERACTION=1
|
7 |
+
ARG POETRY_VIRTUALENVS_IN_PROJECT=1
|
8 |
+
ARG POETRY_VIRTUALENVS_CREATE=1
|
9 |
+
ARG POETRY_CACHE_DIR=/tmp/poetry_cache
|
10 |
+
|
11 |
+
|
12 |
+
FROM nvcr.io/nvidia/pytorch:24.01-py3 as builder_global
|
13 |
+
|
14 |
+
LABEL authors="alessandro@trinca.tornidor.com"
|
15 |
+
|
16 |
+
ARG ARCH
|
17 |
+
ARG LAMBDA_TASK_ROOT
|
18 |
+
ARG PYTHONPATH
|
19 |
+
ARG POETRY_NO_INTERACTION
|
20 |
+
ARG POETRY_VIRTUALENVS_IN_PROJECT
|
21 |
+
ARG POETRY_VIRTUALENVS_CREATE
|
22 |
+
ARG POETRY_CACHE_DIR
|
23 |
+
ARG DEPENDENCY_GROUP
|
24 |
+
|
25 |
+
RUN echo "ARCH: $ARCH ..."
|
26 |
+
|
27 |
+
RUN echo "ARG POETRY_CACHE_DIR: ${POETRY_CACHE_DIR} ..."
|
28 |
+
RUN echo "ARG PYTHONPATH: $PYTHONPATH ..."
|
29 |
+
RUN test -n ${DEPENDENCY_GROUP:?}
|
30 |
+
RUN echo "python DEPENDENCY_GROUP: ${DEPENDENCY_GROUP} ..."
|
31 |
+
RUN echo "arg dep:"
|
32 |
+
|
33 |
+
# Set working directory to function root directory
|
34 |
+
WORKDIR ${LAMBDA_TASK_ROOT}
|
35 |
+
COPY requirements_poetry.txt pyproject.toml poetry.lock README.md ${LAMBDA_TASK_ROOT}/
|
36 |
+
|
37 |
+
RUN cat /etc/lsb-release
|
38 |
+
# avoid segment-geospatial exception caused by missing libGL.so.1 library
|
39 |
+
RUN echo "BUILDER: check libz.s* before start" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
40 |
+
|
41 |
+
ADD https://github.com/AkihiroSuda/clone3-workaround/releases/download/v1.0.0/clone3-workaround.x86_64 /clone3-workaround
|
42 |
+
RUN chmod 755 /clone3-workaround
|
43 |
+
SHELL ["/clone3-workaround","/bin/sh", "-c"]
|
44 |
+
|
45 |
+
RUN apt update && apt upgrade -y && apt install -y libgl1 curl python3-pip git-lfs && apt clean
|
46 |
+
COPY ./dockerfiles/apt_preferences_ubuntu /etc/apt/preferences
|
47 |
+
COPY ./dockerfiles/ubuntu.sources /etc/apt/sources.list.d/ubuntu.sources
|
48 |
+
#RUN echo "run update noble..."
|
49 |
+
#RUN apt update
|
50 |
+
#RUN apt update && apt install -t noble zlib1g -y
|
51 |
+
RUN git lfs install
|
52 |
+
RUN echo "BUILDER: check libz.s* after install from trixie" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
53 |
+
|
54 |
+
RUN ls -l /etc/apt/sources* /etc/apt/preferences*
|
55 |
+
|
56 |
+
# poetry installation path is NOT within ${LAMBDA_TASK_ROOT}: not needed for runtime docker image
|
57 |
+
RUN python -m pip install -r ${LAMBDA_TASK_ROOT}/requirements_poetry.txt
|
58 |
+
|
59 |
+
RUN which poetry && poetry --version && poetry config --list
|
60 |
+
RUN poetry config virtualenvs.path ${LAMBDA_TASK_ROOT}
|
61 |
+
RUN poetry config installer.max-workers 7
|
62 |
+
RUN echo "# poetry config --list #" && poetry config --list
|
63 |
+
RUN ls -ld ${LAMBDA_TASK_ROOT}/
|
64 |
+
#RUN . ${LAMBDA_TASK_ROOT}/.venv/bin/activate && ${LAMBDA_TASK_ROOT}/.venv/bin/python --version && ${LAMBDA_TASK_ROOT}/.venv/bin/python -m pip install pip wheel setuptools --upgrade
|
65 |
+
RUN poetry run python -m pip install pip wheel setuptools --upgrade
|
66 |
+
RUN poetry install --with ${DEPENDENCY_GROUP} --no-root -vvv
|
67 |
+
|
68 |
+
|
69 |
+
FROM nvcr.io/nvidia/pytorch:24.01-py3 as runtime
|
70 |
+
|
71 |
+
ARG ARCH
|
72 |
+
ARG LAMBDA_TASK_ROOT
|
73 |
+
|
74 |
+
ENV VIRTUAL_ENV=${LAMBDA_TASK_ROOT}/.venv \
|
75 |
+
PATH="${LAMBDA_TASK_ROOT}/.venv/bin:$PATH"
|
76 |
+
|
77 |
+
RUN echo "COPY --from=builder_global /usr/lib/${ARCH}-linux-gnu/libGL.so* /usr/lib/${ARCH}-linux-gnu/"
|
78 |
+
COPY --from=builder_global /usr/lib/${ARCH}-linux-gnu/libGL.so* /usr/lib/${ARCH}-linux-gnu/
|
79 |
+
RUN echo "RUNTIME: check libz.s* before upgrade" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
80 |
+
RUN echo "RUNTIME: remove libz.s* to force upgrade" && rm /usr/lib/${ARCH}-linux-gnu/libz.so*
|
81 |
+
COPY --from=builder_global /usr/lib/${ARCH}-linux-gnu/libz.so* /usr/lib/${ARCH}-linux-gnu/
|
82 |
+
RUN echo "RUNTIME: check libz.s* after copy" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
83 |
+
COPY --from=builder_global ${LAMBDA_TASK_ROOT}/.venv ${LAMBDA_TASK_ROOT}/.venv
|
84 |
+
|
85 |
+
RUN echo "new LAMBDA_TASK_ROOT after hidden venv copy => ${LAMBDA_TASK_ROOT}"
|
86 |
+
RUN ls -ld ${LAMBDA_TASK_ROOT}/
|
87 |
+
RUN ls -lA ${LAMBDA_TASK_ROOT}/
|
88 |
+
|
89 |
+
|
90 |
+
### conditional section
|
91 |
+
FROM node:20-slim AS node_fastapi
|
92 |
+
|
93 |
+
ARG DEPENDENCY_GROUP
|
94 |
+
ENV PNPM_HOME="/pnpm"
|
95 |
+
ENV PATH="$PNPM_HOME:$PATH"
|
96 |
+
|
97 |
+
ADD https://github.com/AkihiroSuda/clone3-workaround/releases/download/v1.0.0/clone3-workaround.x86_64 /clone3-workaround
|
98 |
+
RUN chmod 755 /clone3-workaround
|
99 |
+
SHELL ["/clone3-workaround","/bin/sh", "-c"]
|
100 |
+
RUN corepack enable
|
101 |
+
|
102 |
+
COPY ./static /appnode
|
103 |
+
WORKDIR /appnode
|
104 |
+
# RUN if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then echo "pnpm store path:" && pnpm store path; fi
|
105 |
+
|
106 |
+
|
107 |
+
FROM node_fastapi AS node_prod_deps
|
108 |
+
|
109 |
+
ARG DEPENDENCY_GROUP
|
110 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then \
|
111 |
+
pnpm install --prod --frozen-lockfile; else \
|
112 |
+
echo "DEPENDENCY_GROUP 1: ${DEPENDENCY_GROUP} ..."; fi
|
113 |
+
# here multiple conditions concatenated to avoid failing on check
|
114 |
+
RUN if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then if [ ! -d /appnode/node_modules ]; then echo "no node_modules folder" && exit 1; fi; fi
|
115 |
+
|
116 |
+
|
117 |
+
FROM node_fastapi AS node_build
|
118 |
+
|
119 |
+
ARG DEPENDENCY_GROUP
|
120 |
+
ARG VITE__MAP_DESCRIPTION
|
121 |
+
ARG VITE__SAMGIS_SPACE
|
122 |
+
RUN echo "VITE__MAP_DESCRIPTION:" ${VITE__MAP_DESCRIPTION}
|
123 |
+
RUN echo "VITE__SAMGIS_SPACE:" ${VITE__SAMGIS_SPACE}
|
124 |
+
|
125 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then \
|
126 |
+
pnpm install --frozen-lockfile; else \
|
127 |
+
echo "DEPENDENCY_GROUP 2: ${DEPENDENCY_GROUP} ..."; fi
|
128 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then pnpm build; fi
|
129 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then \
|
130 |
+
pnpm tailwindcss -i /appnode/src/input.css -o /appnode/dist/output.css; fi
|
131 |
+
RUN if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then if [ ! -d /appnode/dist ]; then echo "no dist folder" && exit 1; fi; fi
|
132 |
+
|
133 |
+
|
134 |
+
FROM runtime
|
135 |
+
ARG FASTAPI_STATIC
|
136 |
+
RUN mkdir ${FASTAPI_STATIC}
|
137 |
+
|
138 |
+
COPY ./machine_learning_models ${LAMBDA_TASK_ROOT}/machine_learning_models
|
139 |
+
COPY --from=node_prod_deps /appnode/node_modules* ${FASTAPI_STATIC}/node_modules
|
140 |
+
COPY --from=node_build /appnode/dist* ${FASTAPI_STATIC}/dist
|
dockerfiles/dockerfile-lisa-predictions
ADDED
@@ -0,0 +1,45 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
FROM registry.gitlab.com/aletrn/gis-lisa-base:1.2.2
|
2 |
+
|
3 |
+
# Include global arg in this stage of the build
|
4 |
+
ARG LAMBDA_TASK_ROOT="/var/task"
|
5 |
+
ARG PYTHONPATH="${LAMBDA_TASK_ROOT}:${PYTHONPATH}:/usr/local/lib/python3/dist-packages"
|
6 |
+
ENV VIRTUAL_ENV=${LAMBDA_TASK_ROOT}/.venv \
|
7 |
+
PATH="${LAMBDA_TASK_ROOT}/.venv/bin:$PATH"
|
8 |
+
ENV IS_AWS_LAMBDA=""
|
9 |
+
|
10 |
+
# Set working directory to function root directory
|
11 |
+
WORKDIR ${LAMBDA_TASK_ROOT}
|
12 |
+
|
13 |
+
ADD https://github.com/AkihiroSuda/clone3-workaround/releases/download/v1.0.0/clone3-workaround.x86_64 /clone3-workaround
|
14 |
+
RUN chmod 755 /clone3-workaround
|
15 |
+
SHELL ["/clone3-workaround","/bin/sh", "-c"]
|
16 |
+
|
17 |
+
COPY scripts ${LAMBDA_TASK_ROOT}/scripts
|
18 |
+
COPY samgis ${LAMBDA_TASK_ROOT}/samgis
|
19 |
+
COPY wrappers ${LAMBDA_TASK_ROOT}/wrappers
|
20 |
+
|
21 |
+
RUN ls -l /usr/bin/which
|
22 |
+
RUN /usr/bin/which python
|
23 |
+
RUN python -v
|
24 |
+
RUN echo "PYTHONPATH: ${PYTHONPATH}."
|
25 |
+
RUN echo "PATH: ${PATH}."
|
26 |
+
RUN echo "LAMBDA_TASK_ROOT: ${LAMBDA_TASK_ROOT}."
|
27 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}
|
28 |
+
RUN ls -ld ${LAMBDA_TASK_ROOT}
|
29 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/machine_learning_models
|
30 |
+
RUN python -c "import sys; print(sys.path)"
|
31 |
+
RUN python -c "import cv2"
|
32 |
+
RUN python -c "import fastapi"
|
33 |
+
RUN python -c "import geopandas"
|
34 |
+
RUN python -c "import loguru"
|
35 |
+
RUN python -c "import onnxruntime"
|
36 |
+
RUN python -c "import rasterio"
|
37 |
+
RUN python -c "import uvicorn"
|
38 |
+
RUN df -h
|
39 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/samgis/
|
40 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/wrappers/
|
41 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/static/
|
42 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/static/dist
|
43 |
+
RUN ls -l ${LAMBDA_TASK_ROOT}/static/node_modules
|
44 |
+
|
45 |
+
CMD ["uvicorn", "wrappers.fastapi_wrapper:app", "--host", "0.0.0.0", "--port", "7860"]
|
dockerfiles/dockerfile-samgis-base
ADDED
@@ -0,0 +1,132 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
# Include global ARGs at the dockerfile top
|
2 |
+
ARG ARCH="x86_64"
|
3 |
+
ARG LAMBDA_TASK_ROOT="/var/task"
|
4 |
+
ARG FASTAPI_STATIC="${LAMBDA_TASK_ROOT}/static"
|
5 |
+
ARG PYTHONPATH="${LAMBDA_TASK_ROOT}:${PYTHONPATH}:/usr/local/lib/python3/dist-packages"
|
6 |
+
ARG POETRY_NO_INTERACTION=1
|
7 |
+
ARG POETRY_VIRTUALENVS_IN_PROJECT=1
|
8 |
+
ARG POETRY_VIRTUALENVS_CREATE=1
|
9 |
+
ARG POETRY_CACHE_DIR=/tmp/poetry_cache
|
10 |
+
ARG RIE="https://github.com/aws/aws-lambda-runtime-interface-emulator/releases/latest/download/aws-lambda-rie"
|
11 |
+
|
12 |
+
|
13 |
+
FROM nvcr.io/nvidia/pytorch:24.01-py3 as builder_global
|
14 |
+
|
15 |
+
ARG ARCH
|
16 |
+
ARG LAMBDA_TASK_ROOT
|
17 |
+
ARG PYTHONPATH
|
18 |
+
ARG POETRY_NO_INTERACTION
|
19 |
+
ARG POETRY_VIRTUALENVS_IN_PROJECT
|
20 |
+
ARG POETRY_VIRTUALENVS_CREATE
|
21 |
+
ARG POETRY_CACHE_DIR
|
22 |
+
ARG RIE
|
23 |
+
ARG DEPENDENCY_GROUP
|
24 |
+
ARG ZLIB1G="http://ftp.it.debian.org/debian/pool/main/z/zlib/zlib1g_1.3.dfsg-3+b1_amd64.deb"
|
25 |
+
|
26 |
+
RUN echo "ARCH: $ARCH ..."
|
27 |
+
|
28 |
+
RUN echo "ARG RIE: $RIE ..."
|
29 |
+
RUN echo "ARG POETRY_CACHE_DIR: ${POETRY_CACHE_DIR} ..."
|
30 |
+
RUN echo "ARG PYTHONPATH: $PYTHONPATH ..."
|
31 |
+
RUN test -n ${DEPENDENCY_GROUP:?}
|
32 |
+
RUN echo "python DEPENDENCY_GROUP: ${DEPENDENCY_GROUP} ..."
|
33 |
+
RUN echo "arg dep:"
|
34 |
+
|
35 |
+
# Set working directory to function root directory
|
36 |
+
WORKDIR ${LAMBDA_TASK_ROOT}
|
37 |
+
COPY requirements_poetry.txt pyproject.toml poetry.lock README.md ${LAMBDA_TASK_ROOT}/
|
38 |
+
|
39 |
+
RUN cat /etc/lsb-release
|
40 |
+
# avoid segment-geospatial exception caused by missing libGL.so.1 library
|
41 |
+
RUN echo "BUILDER: check libz.s* before start" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
42 |
+
RUN apt update && apt install -y libgl1 curl python3-pip && apt clean
|
43 |
+
COPY ./dockerfiles/apt_preferences_debian /etc/apt/preferences
|
44 |
+
COPY ./dockerfiles/debian.sources /etc/apt/sources.list.d/debian.sources
|
45 |
+
RUN apt update && apt install -t trixie zlib1g -y && apt clean
|
46 |
+
RUN echo "BUILDER: check libz.s* after install from trixie" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
47 |
+
|
48 |
+
RUN ls -l /etc/apt/sources* /etc/apt/preferences*
|
49 |
+
RUN curl -Lo /usr/local/bin/aws-lambda-rie ${RIE}
|
50 |
+
|
51 |
+
# poetry installation path is NOT within ${LAMBDA_TASK_ROOT}: not needed for runtime docker image
|
52 |
+
RUN python -m pip install -r ${LAMBDA_TASK_ROOT}/requirements_poetry.txt
|
53 |
+
|
54 |
+
RUN which poetry && poetry --version && poetry config --list
|
55 |
+
RUN poetry config virtualenvs.path ${LAMBDA_TASK_ROOT}
|
56 |
+
RUN echo "# poetry config --list #" && poetry config --list
|
57 |
+
RUN poetry install --with ${DEPENDENCY_GROUP} --no-root
|
58 |
+
|
59 |
+
|
60 |
+
FROM python:3.11-slim-bookworm as runtime
|
61 |
+
|
62 |
+
ARG ARCH
|
63 |
+
ARG LAMBDA_TASK_ROOT
|
64 |
+
|
65 |
+
ENV VIRTUAL_ENV=${LAMBDA_TASK_ROOT}/.venv \
|
66 |
+
PATH="${LAMBDA_TASK_ROOT}/.venv/bin:$PATH"
|
67 |
+
|
68 |
+
RUN echo "COPY --from=builder_global /usr/lib/${ARCH}-linux-gnu/libGL.so* /usr/lib/${ARCH}-linux-gnu/"
|
69 |
+
COPY --from=builder_global /usr/lib/${ARCH}-linux-gnu/libGL.so* /usr/lib/${ARCH}-linux-gnu/
|
70 |
+
RUN echo "RUNTIME: check libz.s* before upgrade" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
71 |
+
RUN echo "RUNTIME: remove libz.s* to force upgrade" && rm /usr/lib/${ARCH}-linux-gnu/libz.so*
|
72 |
+
COPY --from=builder_global /usr/lib/${ARCH}-linux-gnu/libz.so* /usr/lib/${ARCH}-linux-gnu/
|
73 |
+
RUN echo "RUNTIME: check libz.s* after copy" && ls -l /usr/lib/${ARCH}-linux-gnu/libz.so*
|
74 |
+
COPY --from=builder_global ${LAMBDA_TASK_ROOT}/.venv ${LAMBDA_TASK_ROOT}/.venv
|
75 |
+
|
76 |
+
RUN echo "new LAMBDA_TASK_ROOT after hidden venv copy => ${LAMBDA_TASK_ROOT}"
|
77 |
+
RUN ls -ld ${LAMBDA_TASK_ROOT}/
|
78 |
+
RUN ls -lA ${LAMBDA_TASK_ROOT}/
|
79 |
+
|
80 |
+
COPY --from=builder_global /usr/local/bin/aws-lambda-rie /usr/local/bin/aws-lambda-rie
|
81 |
+
RUN chmod +x /usr/local/bin/aws-lambda-rie
|
82 |
+
COPY ./scripts/lambda-entrypoint.sh /lambda-entrypoint.sh
|
83 |
+
RUN chmod +x /lambda-entrypoint.sh
|
84 |
+
|
85 |
+
|
86 |
+
### conditional section
|
87 |
+
FROM node:20-slim AS node_fastapi
|
88 |
+
|
89 |
+
ARG DEPENDENCY_GROUP
|
90 |
+
ENV PNPM_HOME="/pnpm"
|
91 |
+
ENV PATH="$PNPM_HOME:$PATH"
|
92 |
+
RUN corepack enable
|
93 |
+
|
94 |
+
COPY ./static /appnode
|
95 |
+
WORKDIR /appnode
|
96 |
+
# RUN if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then echo "pnpm store path:" && pnpm store path; fi
|
97 |
+
|
98 |
+
|
99 |
+
FROM node_fastapi AS node_prod_deps
|
100 |
+
|
101 |
+
ARG DEPENDENCY_GROUP
|
102 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then \
|
103 |
+
pnpm install --prod --frozen-lockfile; else \
|
104 |
+
echo "DEPENDENCY_GROUP 1: ${DEPENDENCY_GROUP} ..."; fi
|
105 |
+
# here multiple conditions concatenated to avoid failing on check
|
106 |
+
RUN if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then if [ ! -d /appnode/node_modules ]; then echo "no node_modules folder" && exit 1; fi; fi
|
107 |
+
|
108 |
+
|
109 |
+
FROM node_fastapi AS node_build
|
110 |
+
|
111 |
+
ARG DEPENDENCY_GROUP
|
112 |
+
ARG VITE__MAP_DESCRIPTION
|
113 |
+
ARG VITE__SAMGIS_SPACE
|
114 |
+
RUN echo "VITE__MAP_DESCRIPTION:" ${VITE__MAP_DESCRIPTION}
|
115 |
+
RUN echo "VITE__SAMGIS_SPACE:" ${VITE__SAMGIS_SPACE}
|
116 |
+
|
117 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then \
|
118 |
+
pnpm install --frozen-lockfile; else \
|
119 |
+
echo "DEPENDENCY_GROUP 2: ${DEPENDENCY_GROUP} ..."; fi
|
120 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then pnpm build; fi
|
121 |
+
RUN --mount=type=cache,id=pnpm,target=/pnpm/store if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then \
|
122 |
+
pnpm tailwindcss -i /appnode/src/input.css -o /appnode/dist/output.css; fi
|
123 |
+
RUN if [ "${DEPENDENCY_GROUP}" = "fastapi" ]; then if [ ! -d /appnode/dist ]; then echo "no dist folder" && exit 1; fi; fi
|
124 |
+
|
125 |
+
|
126 |
+
FROM runtime
|
127 |
+
ARG FASTAPI_STATIC
|
128 |
+
RUN mkdir ${FASTAPI_STATIC}
|
129 |
+
|
130 |
+
COPY ./machine_learning_models ${LAMBDA_TASK_ROOT}/machine_learning_models
|
131 |
+
COPY --from=node_prod_deps /appnode/node_modules* ${FASTAPI_STATIC}/node_modules
|
132 |
+
COPY --from=node_build /appnode/dist* ${FASTAPI_STATIC}/dist
|
dockerfiles/ubuntu.sources
ADDED
@@ -0,0 +1,18 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
deb http://it.archive.ubuntu.com/ubuntu/ jammy main universe restricted multiverse
|
2 |
+
deb-src http://it.archive.ubuntu.com/ubuntu/ jammy main universe restricted multiverse
|
3 |
+
|
4 |
+
deb http://security.ubuntu.com/ubuntu jammy-security main universe restricted multiverse
|
5 |
+
deb-src http://security.ubuntu.com/ubuntu jammy-security main universe restricted multiverse
|
6 |
+
|
7 |
+
deb http://it.archive.ubuntu.com/ubuntu/ jammy-updates main universe restricted multiverse
|
8 |
+
deb-src http://it.archive.ubuntu.com/ubuntu/ jammy-updates main universe restricted multiverse
|
9 |
+
|
10 |
+
|
11 |
+
deb http://it.archive.ubuntu.com/ubuntu/ noble main universe restricted multiverse
|
12 |
+
deb-src http://it.archive.ubuntu.com/ubuntu/ noble main universe restricted multiverse
|
13 |
+
|
14 |
+
deb http://security.ubuntu.com/ubuntu noble-security main universe restricted multiverse
|
15 |
+
deb-src http://security.ubuntu.com/ubuntu noble-security main universe restricted multiverse
|
16 |
+
|
17 |
+
deb http://it.archive.ubuntu.com/ubuntu/ noble-updates main universe restricted multiverse
|
18 |
+
deb-src http://it.archive.ubuntu.com/ubuntu/ noble-updates main universe restricted multiverse
|
docs/.gitignore
ADDED
File without changes
|
docs/Changelog.md
ADDED
@@ -0,0 +1,37 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
# Changelog
|
2 |
+
|
3 |
+
## Version 1.2.2
|
4 |
+
- update dependencies version
|
5 |
+
|
6 |
+
## Version 1.2.1
|
7 |
+
- update dependencies version
|
8 |
+
|
9 |
+
## Version 1.2.0
|
10 |
+
- code refactor to separate core functionality (instance segmentation) from other code
|
11 |
+
- updated test coverage
|
12 |
+
|
13 |
+
## Version 1.1.0
|
14 |
+
- Added this changelog
|
15 |
+
- specific backend branch code uses terrain providers like nextzen and MapBox Terrain-RGB v1
|
16 |
+
- update test coverage
|
17 |
+
- update python dependencies versions
|
18 |
+
- update node dependencies versions
|
19 |
+
|
20 |
+
## Version 1.0.2
|
21 |
+
- HuggingFace frontend demo: update the navbar url to SamGIS docs
|
22 |
+
- add two openapi docs builder scripts
|
23 |
+
- update samgis version within docs
|
24 |
+
- remove unused package.json
|
25 |
+
|
26 |
+
## Version 1.0.1
|
27 |
+
- fixed zlib1g security vulnerability in python:3.11-slim-bookworm docker image, see https://security-tracker.debian.org/tracker/CVE-2023-45853
|
28 |
+
|
29 |
+
## Version 1.0.0
|
30 |
+
First release:
|
31 |
+
- user onboarding tour with driver.js
|
32 |
+
- code decoupling between the AWS lambda wrapper and the backend...
|
33 |
+
- ...now also deployed on this HuggingSpace space demo (here some explanation about adding a SPA vuejs frontend)
|
34 |
+
- request input validation using Pydantic
|
35 |
+
- support for array prompts (both rectangle and point types)
|
36 |
+
- tiles download/merge/crop steps uses contextily by geopandas
|
37 |
+
- CSS frontend style with Tailwind
|
docs/Makefile
ADDED
@@ -0,0 +1,20 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
# Minimal makefile for Sphinx documentation
|
2 |
+
#
|
3 |
+
|
4 |
+
# You can set these variables from the command line, and also
|
5 |
+
# from the environment for the first two.
|
6 |
+
SPHINXOPTS ?=
|
7 |
+
SPHINXBUILD ?= sphinx-build
|
8 |
+
SOURCEDIR = .
|
9 |
+
BUILDDIR = _build
|
10 |
+
|
11 |
+
# Put it first so that "make" without argument is like "make help".
|
12 |
+
help:
|
13 |
+
@$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
|
14 |
+
|
15 |
+
.PHONY: help Makefile
|
16 |
+
|
17 |
+
# Catch-all target: route all unknown targets to Sphinx using the new
|
18 |
+
# "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS).
|
19 |
+
%: Makefile
|
20 |
+
@$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
|
docs/_static/.gitignore
ADDED
File without changes
|
docs/brief_project_presentation.md
ADDED
@@ -0,0 +1,20 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
# About this project
|
2 |
+
|
3 |
+
SamGIS is an attempt to perform [machine learning](https://developer.ibm.com/learningpaths/get-started-artificial-intelligence/ai-basics/ai-beginners-guide) [instance segmentation](https://en.wikipedia.org/wiki/Image_segmentation) on [geospatial data](https://en.wikipedia.org/wiki/Geographic_data_and_information) even without the use of dedicated graphics cards.
|
4 |
+
The user interact on a [leaflet](https://leafletjs.com) webmap choosing areas to recognize and a backend responds with a [geojson](https://it.wikipedia.org/wiki/GeoJSON) containing one or more recognized polygons within the initial webmap.
|
5 |
+
|
6 |
+
The backend perform machine learning inference using a [Segment Anything](https://segment-anything.com) model and [ONNXRuntime](https://onnxruntime.ai) as runtime.
|
7 |
+
|
8 |
+
Check about implementation details on my [blog](https://trinca.tornidor.com/projects/samgis-segment-anything-applied-to-GIS).
|
9 |
+
|
10 |
+
# Self-hosted demo
|
11 |
+
|
12 |
+
You can visit my self-hosted demo [here](https://ml-trinca.tornidor.com).
|
13 |
+
Since this demo uses a python container backend hosted on my AWS account I keep it under authentication to prevent abuses.
|
14 |
+
[Here](https://docs.ml-trinca.tornidor.com/openapi) the OpenAPI swagger documentation.
|
15 |
+
|
16 |
+
# HuggingFace Space demo
|
17 |
+
|
18 |
+
I added also a demo on this [HuggingFace Space](https://huggingface.co/spaces/aletrn/samgis). It's
|
19 |
+
possible to find [here](https://aletrn-samgis.hf.space/) the direct space url and
|
20 |
+
[here](https://aletrn-samgis.hf.space/docs#/) the OpenAPI swagger documentation.
|
docs/conf.py
ADDED
@@ -0,0 +1,72 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
# Configuration file for the Sphinx documentation builder.
|
2 |
+
#
|
3 |
+
# For the full list of built-in configuration values, see the documentation:
|
4 |
+
# https://www.sphinx-doc.org/en/master/usage/configuration.html
|
5 |
+
|
6 |
+
# -- Project information -----------------------------------------------------
|
7 |
+
# https://www.sphinx-doc.org/en/master/usage/configuration.html#project-information
|
8 |
+
import os
|
9 |
+
import sys
|
10 |
+
|
11 |
+
project = 'SamGIS'
|
12 |
+
copyright = '2023-now, alessandro trinca tornidor'
|
13 |
+
author = 'alessandro trinca tornidor'
|
14 |
+
release = '1.2.2'
|
15 |
+
|
16 |
+
# -- General configuration ---------------------------------------------------
|
17 |
+
# https://www.sphinx-doc.org/en/master/usage/configuration.html#general-configuration
|
18 |
+
sys.path.insert(0, os.path.abspath('..'))
|
19 |
+
|
20 |
+
extensions = [
|
21 |
+
'sphinx.ext.autodoc',
|
22 |
+
'sphinx.ext.viewcode',
|
23 |
+
'sphinx.ext.napoleon',
|
24 |
+
'sphinx_autodoc_typehints',
|
25 |
+
'sphinxcontrib.openapi',
|
26 |
+
'myst_parser',
|
27 |
+
# 'sphinx_autodoc_defaultargs'
|
28 |
+
]
|
29 |
+
# Napoleon settings
|
30 |
+
napoleon_google_docstring = True
|
31 |
+
|
32 |
+
#
|
33 |
+
typehints_defaults = "comma"
|
34 |
+
|
35 |
+
templates_path = ['_templates']
|
36 |
+
exclude_patterns = [
|
37 |
+
'_build', 'Thumbs.db', '.DS_Store', 'build/*', 'machine_learning_models', 'machine_learning_models/*'
|
38 |
+
]
|
39 |
+
|
40 |
+
source_suffix = {
|
41 |
+
'.rst': 'restructuredtext',
|
42 |
+
'.txt': 'restructuredtext',
|
43 |
+
'.md': 'markdown',
|
44 |
+
}
|
45 |
+
|
46 |
+
# default args values
|
47 |
+
rst_prolog = """
|
48 |
+
.. |default| raw:: html
|
49 |
+
|
50 |
+
<div class="default-value-section">""" + \
|
51 |
+
' <span class="default-value-label">Default:</span>'
|
52 |
+
|
53 |
+
# -- Options for HTML output -------------------------------------------------
|
54 |
+
# https://www.sphinx-doc.org/en/master/usage/configuration.html#options-for-html-output
|
55 |
+
|
56 |
+
html_theme = 'alabaster'
|
57 |
+
html_sidebars = {
|
58 |
+
'**': [
|
59 |
+
'about.html',
|
60 |
+
'navigation.html',
|
61 |
+
'relations.html',
|
62 |
+
'searchbox.html',
|
63 |
+
'donate.html',
|
64 |
+
]
|
65 |
+
}
|
66 |
+
html_static_path = ['_static']
|
67 |
+
html_theme_options = {
|
68 |
+
"description": "Segment Anything applied to geodata",
|
69 |
+
"fixed_sidebar": True,
|
70 |
+
"sidebar_collapse": False,
|
71 |
+
'globaltoc_collapse': False
|
72 |
+
}
|
docs/external_links.rst
ADDED
@@ -0,0 +1,5 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
External links
|
2 |
+
==============
|
3 |
+
|
4 |
+
.. include:: external_links_md.md
|
5 |
+
:parser: myst_parser.sphinx_
|
docs/external_links_md.md
ADDED
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
1 |
+
- My [SamGIS demo website](https://ml-trinca.tornidor.com)
|
2 |
+
- My [personal website](https://trinca.tornidor.com)
|
docs/index.rst
ADDED
@@ -0,0 +1,27 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
.. SamGIS documentation master file, created by
|
2 |
+
sphinx-quickstart on Thu Nov 23 21:51:08 2023.
|
3 |
+
You can adapt this file completely to your liking, but it should at least
|
4 |
+
contain the root `toctree` directive.
|
5 |
+
|
6 |
+
Welcome to SamGIS's documentation!
|
7 |
+
==================================
|
8 |
+
|
9 |
+
.. include:: brief_project_presentation.md
|
10 |
+
:parser: myst_parser.sphinx_
|
11 |
+
.. include:: Changelog.md
|
12 |
+
:parser: myst_parser.sphinx_
|
13 |
+
|
14 |
+
.. toctree::
|
15 |
+
:maxdepth: 2
|
16 |
+
:hidden:
|
17 |
+
|
18 |
+
modules
|
19 |
+
other_resources
|
20 |
+
|
21 |
+
|
22 |
+
Indices and tables documentation
|
23 |
+
================================
|
24 |
+
|
25 |
+
* :ref:`genindex`
|
26 |
+
* :ref:`modindex`
|
27 |
+
* :ref:`search`
|
docs/make.bat
ADDED
@@ -0,0 +1,35 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
@ECHO OFF
|
2 |
+
|
3 |
+
pushd %~dp0
|
4 |
+
|
5 |
+
REM Command file for Sphinx documentation
|
6 |
+
|
7 |
+
if "%SPHINXBUILD%" == "" (
|
8 |
+
set SPHINXBUILD=sphinx-build
|
9 |
+
)
|
10 |
+
set SOURCEDIR=.
|
11 |
+
set BUILDDIR=_build
|
12 |
+
|
13 |
+
%SPHINXBUILD% >NUL 2>NUL
|
14 |
+
if errorlevel 9009 (
|
15 |
+
echo.
|
16 |
+
echo.The 'sphinx-build' command was not found. Make sure you have Sphinx
|
17 |
+
echo.installed, then set the SPHINXBUILD environment variable to point
|
18 |
+
echo.to the full path of the 'sphinx-build' executable. Alternatively you
|
19 |
+
echo.may add the Sphinx directory to PATH.
|
20 |
+
echo.
|
21 |
+
echo.If you don't have Sphinx installed, grab it from
|
22 |
+
echo.https://www.sphinx-doc.org/
|
23 |
+
exit /b 1
|
24 |
+
)
|
25 |
+
|
26 |
+
if "%1" == "" goto help
|
27 |
+
|
28 |
+
%SPHINXBUILD% -M %1 %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O%
|
29 |
+
goto end
|
30 |
+
|
31 |
+
:help
|
32 |
+
%SPHINXBUILD% -M help %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O%
|
33 |
+
|
34 |
+
:end
|
35 |
+
popd
|
docs/modules.rst
ADDED
@@ -0,0 +1,7 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
samgis
|
2 |
+
======
|
3 |
+
|
4 |
+
.. toctree::
|
5 |
+
:maxdepth: 4
|
6 |
+
|
7 |
+
samgis
|
docs/openapi.rst
ADDED
@@ -0,0 +1,11 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
OpenAPI Specs
|
2 |
+
=============
|
3 |
+
|
4 |
+
This API is under oauth authentication for the self-hosted version (now it works as a lambda AWS).
|
5 |
+
Contact the maintainer/administrator for more info about this.
|
6 |
+
|
7 |
+
.. openapi:: specs/openapi.yaml
|
8 |
+
:paths:
|
9 |
+
/lambda-ml-fastsam-api
|
10 |
+
:examples:
|
11 |
+
:encoding: utf-8
|
docs/other_resources.rst
ADDED
@@ -0,0 +1,9 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Other resources
|
2 |
+
===============
|
3 |
+
|
4 |
+
.. toctree::
|
5 |
+
:maxdepth: 4
|
6 |
+
|
7 |
+
external_links
|
8 |
+
|
9 |
+
openapi
|
docs/samgis.io.rst
ADDED
@@ -0,0 +1,53 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
samgis.io package
|
2 |
+
=================
|
3 |
+
|
4 |
+
Submodules
|
5 |
+
----------
|
6 |
+
|
7 |
+
samgis.io.coordinates\_pixel\_conversion module
|
8 |
+
-----------------------------------------------
|
9 |
+
|
10 |
+
.. automodule:: samgis.io.coordinates_pixel_conversion
|
11 |
+
:members:
|
12 |
+
:undoc-members:
|
13 |
+
:show-inheritance:
|
14 |
+
|
15 |
+
samgis.io.geo\_helpers module
|
16 |
+
-----------------------------
|
17 |
+
|
18 |
+
.. automodule:: samgis.io.geo_helpers
|
19 |
+
:members:
|
20 |
+
:undoc-members:
|
21 |
+
:show-inheritance:
|
22 |
+
|
23 |
+
samgis.io.raster\_helpers module
|
24 |
+
--------------------------------
|
25 |
+
|
26 |
+
.. automodule:: samgis.io.raster_helpers
|
27 |
+
:members:
|
28 |
+
:undoc-members:
|
29 |
+
:show-inheritance:
|
30 |
+
|
31 |
+
samgis.io.tms2geotiff module
|
32 |
+
----------------------------
|
33 |
+
|
34 |
+
.. automodule:: samgis.io.tms2geotiff
|
35 |
+
:members:
|
36 |
+
:undoc-members:
|
37 |
+
:show-inheritance:
|
38 |
+
|
39 |
+
samgis.io.wrappers\_helpers module
|
40 |
+
----------------------------------
|
41 |
+
|
42 |
+
.. automodule:: samgis.io.wrappers_helpers
|
43 |
+
:members:
|
44 |
+
:undoc-members:
|
45 |
+
:show-inheritance:
|
46 |
+
|
47 |
+
Module contents
|
48 |
+
---------------
|
49 |
+
|
50 |
+
.. automodule:: samgis.io
|
51 |
+
:members:
|
52 |
+
:undoc-members:
|
53 |
+
:show-inheritance:
|
docs/samgis.prediction_api.rst
ADDED
@@ -0,0 +1,21 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
samgis.prediction\_api package
|
2 |
+
==============================
|
3 |
+
|
4 |
+
Submodules
|
5 |
+
----------
|
6 |
+
|
7 |
+
samgis.prediction\_api.predictors module
|
8 |
+
----------------------------------------
|
9 |
+
|
10 |
+
.. automodule:: samgis.prediction_api.predictors
|
11 |
+
:members:
|
12 |
+
:undoc-members:
|
13 |
+
:show-inheritance:
|
14 |
+
|
15 |
+
Module contents
|
16 |
+
---------------
|
17 |
+
|
18 |
+
.. automodule:: samgis.prediction_api
|
19 |
+
:members:
|
20 |
+
:undoc-members:
|
21 |
+
:show-inheritance:
|
docs/samgis.rst
ADDED
@@ -0,0 +1,20 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
samgis package
|
2 |
+
==============
|
3 |
+
|
4 |
+
Subpackages
|
5 |
+
-----------
|
6 |
+
|
7 |
+
.. toctree::
|
8 |
+
:maxdepth: 4
|
9 |
+
|
10 |
+
samgis.io
|
11 |
+
samgis.prediction_api
|
12 |
+
samgis.utilities
|
13 |
+
|
14 |
+
Module contents
|
15 |
+
---------------
|
16 |
+
|
17 |
+
.. automodule:: samgis
|
18 |
+
:members:
|
19 |
+
:undoc-members:
|
20 |
+
:show-inheritance:
|
docs/samgis.utilities.rst
ADDED
@@ -0,0 +1,29 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
samgis.utilities package
|
2 |
+
========================
|
3 |
+
|
4 |
+
Submodules
|
5 |
+
----------
|
6 |
+
|
7 |
+
samgis.utilities.constants module
|
8 |
+
---------------------------------
|
9 |
+
|
10 |
+
.. automodule:: samgis.utilities.constants
|
11 |
+
:members:
|
12 |
+
:undoc-members:
|
13 |
+
:show-inheritance:
|
14 |
+
|
15 |
+
samgis.utilities.type\_hints module
|
16 |
+
-----------------------------------
|
17 |
+
|
18 |
+
.. automodule:: samgis.utilities.type_hints
|
19 |
+
:members:
|
20 |
+
:undoc-members:
|
21 |
+
:show-inheritance:
|
22 |
+
|
23 |
+
Module contents
|
24 |
+
---------------
|
25 |
+
|
26 |
+
.. automodule:: samgis.utilities
|
27 |
+
:members:
|
28 |
+
:undoc-members:
|
29 |
+
:show-inheritance:
|
docs/specs/openapi.yaml
ADDED
@@ -0,0 +1,177 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
1 |
+
openapi: 3.1.0
|
2 |
+
info:
|
3 |
+
title: Swagger SamGIS - OpenAPI 3.0
|
4 |
+
description: |-
|
5 |
+
Segment Anything applied to GIS.
|
6 |
+
Some useful links:
|
7 |
+
- [SamGIS online demo](https://ml-trinca.tornidor.com)
|
8 |
+
- [SamGIS documentation](https://docs.ml-trinca.tornidor.com)
|
9 |
+
- [My blog](https://trinca.tornidor.com)
|
10 |
+
contact:
|
11 |
+
name: alessandro's website
|
12 |
+
url: https://trinca.tornidor.com
|
13 |
+
license:
|
14 |
+
name: MIT License
|
15 |
+
url: https://opensource.org/license/mit/
|
16 |
+
version: "1.2.0"
|
17 |
+
servers:
|
18 |
+
- url: https://localhost:8000/
|
19 |
+
tags:
|
20 |
+
- name: samgis-aws
|
21 |
+
description: segment anything applied to gis (self-hosted demo)
|
22 |
+
externalDocs:
|
23 |
+
url: https://ml-trinca.tornidor.com/
|
24 |
+
- name: samgis-huggingface
|
25 |
+
description: segment anything applied to gis (huggingface demo)
|
26 |
+
externalDocs:
|
27 |
+
url: https://huggingface.co/spaces/aletrn/samgis
|
28 |
+
- name: segment-anything
|
29 |
+
description: segment anything machine learning model
|
30 |
+
externalDocs:
|
31 |
+
url: http://segment-anything.com
|
32 |
+
- name: gis
|
33 |
+
externalDocs:
|
34 |
+
url: https://it.wikipedia.org/wiki/Geographic_information_system
|
35 |
+
paths:
|
36 |
+
/lambda-ml-fastsam-api:
|
37 |
+
post:
|
38 |
+
tags:
|
39 |
+
- samgis
|
40 |
+
summary: Make GIS ML predictions
|
41 |
+
requestBody:
|
42 |
+
description: input request for GIS ML predictions
|
43 |
+
content:
|
44 |
+
application/json:
|
45 |
+
schema:
|
46 |
+
$ref: '#/components/schemas/ApiRequestBody'
|
47 |
+
required: true
|
48 |
+
responses:
|
49 |
+
'200':
|
50 |
+
description: successful operation
|
51 |
+
content:
|
52 |
+
application/json:
|
53 |
+
schema:
|
54 |
+
$ref: '#/components/schemas/ApiResponseBodySuccess'
|
55 |
+
'400':
|
56 |
+
description: Bad request
|
57 |
+
content:
|
58 |
+
application/json:
|
59 |
+
schema:
|
60 |
+
$ref: '#/components/schemas/ApiResponseBodyFailure'
|
61 |
+
'422':
|
62 |
+
description: Unprocessable Entity
|
63 |
+
content:
|
64 |
+
application/json:
|
65 |
+
schema:
|
66 |
+
$ref: '#/components/schemas/ApiResponseBodyFailure'
|
67 |
+
'500':
|
68 |
+
description: Internal Server Error
|
69 |
+
content:
|
70 |
+
application/json:
|
71 |
+
schema:
|
72 |
+
$ref: '#/components/schemas/ApiResponseBodyFailure'
|
73 |
+
components:
|
74 |
+
schemas:
|
75 |
+
ApiRequestBody:
|
76 |
+
required:
|
77 |
+
- bbox
|
78 |
+
- prompt
|
79 |
+
- zoom
|
80 |
+
type: object
|
81 |
+
properties:
|
82 |
+
bbox:
|
83 |
+
type: object
|
84 |
+
properties:
|
85 |
+
ne:
|
86 |
+
type: object
|
87 |
+
properties:
|
88 |
+
lat:
|
89 |
+
type: number
|
90 |
+
example: 46.180194387028855
|
91 |
+
lng:
|
92 |
+
type: number
|
93 |
+
example: 9.426848938165525
|
94 |
+
sw:
|
95 |
+
type: object
|
96 |
+
properties:
|
97 |
+
lat:
|
98 |
+
type: number
|
99 |
+
example: 46.17511301243843
|
100 |
+
lng:
|
101 |
+
type: number
|
102 |
+
example: 9.415862610040527
|
103 |
+
prompt:
|
104 |
+
type: array
|
105 |
+
items:
|
106 |
+
type: object
|
107 |
+
properties:
|
108 |
+
id:
|
109 |
+
type: integer
|
110 |
+
format: int32
|
111 |
+
example: 448
|
112 |
+
type:
|
113 |
+
type: string
|
114 |
+
example: point
|
115 |
+
data:
|
116 |
+
type: object
|
117 |
+
properties:
|
118 |
+
lat:
|
119 |
+
type: number
|
120 |
+
example: 46.176256754439535
|
121 |
+
lng:
|
122 |
+
type: number
|
123 |
+
example: 9.421805260519237
|
124 |
+
label:
|
125 |
+
type: integer
|
126 |
+
format: int32
|
127 |
+
example: 1
|
128 |
+
zoom:
|
129 |
+
type: integer
|
130 |
+
format: int32
|
131 |
+
example: 17
|
132 |
+
source_type:
|
133 |
+
type: string
|
134 |
+
example: OpenStreetMap
|
135 |
+
ApiResponseBodyFailure:
|
136 |
+
type: object
|
137 |
+
properties:
|
138 |
+
duration_run:
|
139 |
+
type: number
|
140 |
+
example: 0.063
|
141 |
+
message:
|
142 |
+
type: string
|
143 |
+
example: Bad Request
|
144 |
+
request_id:
|
145 |
+
type: string
|
146 |
+
example: test_invoke_id
|
147 |
+
ApiResponseBodySuccess:
|
148 |
+
type: object
|
149 |
+
properties:
|
150 |
+
n_predictions:
|
151 |
+
type: integer
|
152 |
+
format: int32
|
153 |
+
example: 1
|
154 |
+
geojson:
|
155 |
+
type: string
|
156 |
+
example: '{"type":"FeatureCollection","features":[{"type":"Feature","properties":{"raster_val":255.0},"geometry":{"type":"Polygon","coordinates":[[[9.415857195854185,46.17510931936532],[9.426854252815245,46.17510931936532],[9.426854252815245,46.18019812286394],[9.415857195854185,46.18019812286394],[9.415857195854185,46.17510931936532]]]},"id":0},{"type":"Feature","properties":{"raster_val":0.0},"geometry":{"type":"Polygon","coordinates":[[[9.143199920654297,46.30271068141335],[9.495105743408203,46.30271068141335],[9.495105743408203,46.13999860748669],[9.143199920654297,46.13999860748669],[9.143199920654297,46.30271068141335]],[[9.426854252815245,46.17510931936532],[9.426854252815245,46.18019812286394],[9.415857195854185,46.18019812286394],[9.415857195854185,46.17510931936532],[9.426854252815245,46.17510931936532]]]},"id":1}]}'
|
157 |
+
n_shapes_geojson:
|
158 |
+
type: integer
|
159 |
+
format: int32
|
160 |
+
example: 5
|
161 |
+
duration_run:
|
162 |
+
type: number
|
163 |
+
example: 6.703
|
164 |
+
message:
|
165 |
+
type: string
|
166 |
+
example: ok
|
167 |
+
request_id:
|
168 |
+
type: string
|
169 |
+
example: test_invoke_id
|
170 |
+
securitySchemes:
|
171 |
+
samgis_auth:
|
172 |
+
type: oauth2
|
173 |
+
flows:
|
174 |
+
implicit:
|
175 |
+
authorizationUrl: https://example.auth0.com/oauth/authorize
|
176 |
+
scopes:
|
177 |
+
write:lambda-ml-fastsam-api: Make GIS ML predictions
|
events/colico_point_rectangle_output.json
ADDED
@@ -0,0 +1 @@
|
|
|
|
|
1 |
+
{"n_predictions": 1, "geojson": "{\"type\": \"FeatureCollection\", \"features\": [{\"id\": \"0\", \"type\": \"Feature\", \"properties\": {\"raster_val\": 0.0}, \"geometry\": {\"type\": \"Polygon\", \"coordinates\": [[[9.43674087524414, 46.17780978687552], [9.43674087524414, 46.17709660889324], [9.437084197998045, 46.17709660889324], [9.437084197998045, 46.17733433591508], [9.437427520751953, 46.17733433591508], [9.437427520751953, 46.17780978687552], [9.43674087524414, 46.17780978687552]]]}}, {\"id\": \"1\", \"type\": \"Feature\", \"properties\": {\"raster_val\": 255.0}, \"geometry\": {\"type\": \"Polygon\", \"coordinates\": [[[9.426441192626953, 46.18921937663871], [9.429531097412108, 46.18921937663871], [9.429531097412108, 46.18898170100372], [9.43124771118164, 46.18898170100372], [9.43124771118164, 46.18874402434101], [9.432277679443358, 46.18874402434101], [9.432277679443358, 46.18850634665056], [9.432964324951172, 46.18850634665056], [9.432964324951172, 46.18826866793239], [9.433307647705078, 46.18826866793239], [9.433307647705078, 46.18803098818649], [9.433994293212889, 46.18803098818649], [9.433994293212889, 46.18779330741286], [9.435024261474608, 46.18779330741286], [9.435024261474608, 46.18755562561149], [9.436397552490234, 46.18755562561149], [9.436397552490234, 46.18731794278239], [9.43777084350586, 46.18731794278239], [9.43777084350586, 46.187080258925576], [9.438800811767578, 46.187080258925576], [9.438800811767578, 46.18684257404102], [9.43948745727539, 46.18684257404102], [9.43948745727539, 46.186604888128734], [9.44498062133789, 46.186604888128734], [9.44498062133789, 46.186367201188716], [9.447727203369139, 46.186367201188716], [9.447727203369139, 46.18612951322096], [9.44875717163086, 46.18612951322096], [9.44875717163086, 46.18589182422548], [9.449100494384766, 46.18589182422548], [9.449100494384766, 46.18517875107263], [9.449443817138674, 46.18517875107263], [9.449443817138674, 46.182801773760346], [9.449100494384766, 46.182801773760346], [9.449100494384766, 46.182564070376564], [9.44875717163086, 46.182564070376564], [9.44875717163086, 46.18232636596505], [9.445323944091797, 46.18232636596505], [9.445323944091797, 46.1820886605258], [9.443607330322267, 46.1820886605258], [9.443607330322267, 46.1818509540588], [9.44223403930664, 46.1818509540588], [9.44223403930664, 46.181613246564076], [9.441547393798828, 46.181613246564076], [9.441547393798828, 46.1813755380416], [9.441204071044922, 46.1813755380416], [9.441204071044922, 46.17994926532421], [9.441547393798828, 46.17994926532421], [9.441547393798828, 46.178998396291114], [9.441204071044922, 46.178998396291114], [9.441204071044922, 46.17709660889324], [9.440174102783201, 46.17709660889324], [9.440174102783201, 46.180424693674304], [9.439830780029297, 46.180424693674304], [9.439830780029297, 46.18066240630774], [9.439144134521484, 46.18066240630774], [9.439144134521484, 46.180424693674304], [9.438457489013672, 46.180424693674304], [9.438457489013672, 46.180186980013126], [9.438114166259766, 46.180186980013126], [9.438114166259766, 46.17876067646348], [9.438457489013672, 46.17876067646348], [9.438457489013672, 46.17804751081413], [9.438800811767578, 46.17804751081413], [9.438800811767578, 46.17685888084364], [9.439144134521484, 46.17685888084364], [9.439144134521484, 46.17638342166123], [9.438800811767578, 46.17638342166123], [9.438800811767578, 46.1756702251795], [9.438457489013672, 46.1756702251795], [9.438457489013672, 46.17543249096342], [9.438114166259766, 46.17543249096342], [9.438114166259766, 46.1751947557196], [9.43674087524414, 46.1751947557196], [9.43674087524414, 46.17495701944803], [9.436397552490234, 46.17495701944803], [9.436397552490234, 46.17471928214871], [9.436054229736328, 46.17471928214871], [9.436054229736328, 46.17448154382164], [9.435710906982424, 46.17448154382164], [9.435710906982424, 46.17400606408425], [9.435367584228517, 46.17400606408425], [9.435367584228517, 46.17376832267393], [9.435024261474608, 46.17376832267393], 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|
events/colico_prompt1.json
ADDED
@@ -0,0 +1,5 @@
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+
[
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2 |
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{"type": "point", "data": [870, 500], "label": 1},
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3 |
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{"type": "point", "data": [820, 600], "label": 0},
|
4 |
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{"type": "rectangle", "data": [757, 470, 876, 616]}
|
5 |
+
]
|
events/example_output.json
ADDED
@@ -0,0 +1,19 @@
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{
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2 |
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"type": "FeatureCollection",
|
3 |
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"features": [
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4 |
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{
|
5 |
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"type": "Feature",
|
6 |
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"geometry": {
|
7 |
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"type": "Polygon",
|
8 |
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"coordinates": [
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9 |
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[
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10 |
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[46.143, 9.361],
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11 |
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[46.151, 9.401],
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[46.137, 9.353]
|
13 |
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]
|
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]
|
15 |
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},
|
16 |
+
"properties": {"name": "Colico"}
|
17 |
+
}
|
18 |
+
]
|
19 |
+
}
|
events/payload_lisa_teglio.json
ADDED
@@ -0,0 +1,5 @@
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1 |
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{
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"bbox":{"ne":{"lat":46.172594687922256,"lng":10.079248798586057},"sw":{"lat":46.16789155404419,"lng":10.069077862001585}},
|
3 |
+
"string_prompt": "you are a skilled gis analyst with a lot of expertise in photogrammetry and gis field. You need to identify the areas with trees in this photogrammetric image. Please output segmentation mask and explain why.",
|
4 |
+
"zoom":17,"source_type":"Esri.WorldImagery"
|
5 |
+
}
|
events/payload_multiprompt_api_request_body.json
ADDED
@@ -0,0 +1,48 @@
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1 |
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{
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"bbox": {
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3 |
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"ne": {
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"lat": 46.180194387028855,
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5 |
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"lng": 9.426848938165525
|
6 |
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},
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7 |
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"sw": {
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"lat": 46.17511301243843,
|
9 |
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"lng": 9.415862610040527
|
10 |
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}
|
11 |
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},
|
12 |
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"prompt": [
|
13 |
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{
|
14 |
+
"id": 448,
|
15 |
+
"type": "point",
|
16 |
+
"data": {
|
17 |
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"lat": 46.176256754439535,
|
18 |
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"lng": 9.421805260519237
|
19 |
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},
|
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"label": 1
|
21 |
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},
|
22 |
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{
|
23 |
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"id": 607,
|
24 |
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"type": "point",
|
25 |
+
"data": {
|
26 |
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"lat": 46.17625675443,
|
27 |
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"lng": 9.4218052604
|
28 |
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},
|
29 |
+
"label": 0
|
30 |
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},
|
31 |
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{
|
32 |
+
"id": 861,
|
33 |
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"type": "rectangle",
|
34 |
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"data": {
|
35 |
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"ne": {
|
36 |
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"lat": 46.19067068238,
|
37 |
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"lng": 9.44815864957
|
38 |
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},
|
39 |
+
"sw": {
|
40 |
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"lat": 46.17625678,
|
41 |
+
"lng": 9.42180525
|
42 |
+
}
|
43 |
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}
|
44 |
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}
|
45 |
+
],
|
46 |
+
"zoom": 17,
|
47 |
+
"source_type": "OpenStreetMap.Mapnik"
|
48 |
+
}
|
events/payload_multiprompt_api_response_body_failure.json
ADDED
@@ -0,0 +1 @@
|
|
|
|
|
1 |
+
{"duration_run": 0.063, "message": "Bad Request", "request_id": "test_invoke_id"}
|
events/payload_multiprompt_api_response_body_success.json
ADDED
@@ -0,0 +1,8 @@
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1 |
+
{
|
2 |
+
"n_predictions": 1,
|
3 |
+
"geojson": "{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"properties\":{\"raster_val\":255.0},\"geometry\":{\"type\":\"Polygon\",\"coordinates\":[[[9.415857195854185,46.17510931936532],[9.426854252815245,46.17510931936532],[9.426854252815245,46.18019812286394],[9.415857195854185,46.18019812286394],[9.415857195854185,46.17510931936532]]]},\"id\":0},{\"type\":\"Feature\",\"properties\":{\"raster_val\":0.0},\"geometry\":{\"type\":\"Polygon\",\"coordinates\":[[[9.143199920654297,46.30271068141335],[9.495105743408203,46.30271068141335],[9.495105743408203,46.13999860748669],[9.143199920654297,46.13999860748669],[9.143199920654297,46.30271068141335]],[[9.426854252815245,46.17510931936532],[9.426854252815245,46.18019812286394],[9.415857195854185,46.18019812286394],[9.415857195854185,46.17510931936532],[9.426854252815245,46.17510931936532]]]},\"id\":1}]}",
|
4 |
+
"n_shapes_geojson": 5,
|
5 |
+
"duration_run": 6.703,
|
6 |
+
"message": "ok",
|
7 |
+
"request_id": "test_invoke_id"
|
8 |
+
}
|
events/payload_point.json
ADDED
@@ -0,0 +1,14 @@
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|
1 |
+
{
|
2 |
+
"bbox": {
|
3 |
+
"ne": {"lat": 45.699, "lng": 127.1},
|
4 |
+
"sw": {"lat": 30.1, "lng": 148.492}
|
5 |
+
},
|
6 |
+
"prompt": [{
|
7 |
+
"type": "point",
|
8 |
+
"data": {"lat": 36.91, "lng": 136.854},
|
9 |
+
"label": 0
|
10 |
+
}],
|
11 |
+
"zoom": 6,
|
12 |
+
"source_type": "OpenStreetMap",
|
13 |
+
"debug": true
|
14 |
+
}
|
events/payload_point2.json
ADDED
@@ -0,0 +1,14 @@
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|
1 |
+
{
|
2 |
+
"bbox": {
|
3 |
+
"ne": {"lat": 38.03932961278458, "lng": 15.36808069832851},
|
4 |
+
"sw": {"lat": 37.455509218936974, "lng": 14.632807441554068}
|
5 |
+
},
|
6 |
+
"prompt": [{
|
7 |
+
"type": "point",
|
8 |
+
"data": {"lat": 37.0, "lng": 15.0},
|
9 |
+
"label": 0
|
10 |
+
}],
|
11 |
+
"zoom": 10,
|
12 |
+
"source_type": "OpenStreetMap",
|
13 |
+
"debug": true
|
14 |
+
}
|
events/payload_point_eolie.json
ADDED
@@ -0,0 +1,24 @@
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|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"bbox": {
|
3 |
+
"ne": {
|
4 |
+
"lat": 39.036252959636606,
|
5 |
+
"lng": 15.040283203125002
|
6 |
+
},
|
7 |
+
"sw": {
|
8 |
+
"lat": 38.302869955150044,
|
9 |
+
"lng": 13.634033203125002
|
10 |
+
}
|
11 |
+
},
|
12 |
+
"prompt": [
|
13 |
+
{
|
14 |
+
"type": "point",
|
15 |
+
"data": {
|
16 |
+
"lat": 38.48542007717153,
|
17 |
+
"lng": 14.921846904165468
|
18 |
+
},
|
19 |
+
"label": 1
|
20 |
+
}
|
21 |
+
],
|
22 |
+
"zoom": 10,
|
23 |
+
"source_type": "OpenStreetMap"
|
24 |
+
}
|
events/payload_point_error_int_str.json
ADDED
@@ -0,0 +1,62 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"input": {
|
3 |
+
"version": "2.0",
|
4 |
+
"routeKey": "POST /lambda-ml-fastsam-api",
|
5 |
+
"rawPath": "/preview/lambda-ml-fastsam-api",
|
6 |
+
"rawQueryString": "",
|
7 |
+
"headers": {
|
8 |
+
"accept-encoding": "gzip",
|
9 |
+
"authorization": "Bearer aaa.bbb.ccc",
|
10 |
+
"cdn-loop": "cloudflare; loops=1; subreqs=1",
|
11 |
+
"cf-connecting-ip": "2a06:98c0:3600::103",
|
12 |
+
"cf-connecting-o2o": "1",
|
13 |
+
"cf-ew-via": "15",
|
14 |
+
"cf-ray": "82f7a58375170e5d-MXP",
|
15 |
+
"cf-visitor": "{\"scheme\":\"https\"}",
|
16 |
+
"cf-worker": "example-domain.com",
|
17 |
+
"content-length": "257",
|
18 |
+
"content-type": "application/json",
|
19 |
+
"host": "example-domain-aws.execute-api.eu-west-1.amazonaws.com",
|
20 |
+
"x-amzn-trace-id": "Root=1-656bc9e7-3ea67446317bedcb13ac07e2",
|
21 |
+
"x-forwarded-for": "2a06:98c0:3600::103, 162.158.129.178",
|
22 |
+
"x-forwarded-port": "443",
|
23 |
+
"x-forwarded-proto": "https"
|
24 |
+
},
|
25 |
+
"requestContext": {
|
26 |
+
"accountId": "01234567890",
|
27 |
+
"apiId": "example-domain-aws",
|
28 |
+
"authorizer": {
|
29 |
+
"jwt": {
|
30 |
+
"claims": {
|
31 |
+
"aud": "[http://preview-ml-lambda/ https://xxx.eu.auth0.com/userinfo]",
|
32 |
+
"azp": "qYZNGiwEHeZe2QCVXljIDWENwSfKhd8T",
|
33 |
+
"exp": "1701649239",
|
34 |
+
"iat": "1701562839",
|
35 |
+
"iss": "https://xxx.eu.auth0.com/",
|
36 |
+
"scope": "openid profile email",
|
37 |
+
"sub": "auth0|sub-auth-xxxx"
|
38 |
+
},
|
39 |
+
"scopes": null
|
40 |
+
}
|
41 |
+
},
|
42 |
+
"domainName": "example-domain-aws.execute-api.eu-west-1.amazonaws.com",
|
43 |
+
"domainPrefix": "example-domain-aws",
|
44 |
+
"http": {
|
45 |
+
"method": "POST",
|
46 |
+
"path": "/preview/lambda-ml-fastsam-api",
|
47 |
+
"protocol": "HTTP/1.1",
|
48 |
+
"sourceIp": "162.158.129.178",
|
49 |
+
"userAgent": ""
|
50 |
+
},
|
51 |
+
"requestId": "PVx8KhjijoEEJPw=",
|
52 |
+
"routeKey": "POST /lambda-ml-fastsam-api",
|
53 |
+
"stage": "preview",
|
54 |
+
"time": "03/Dec/2023:00:20:55 +0000",
|
55 |
+
"timeEpoch": 1701562855106
|
56 |
+
},
|
57 |
+
"body": "{\"bbox\":{\"ne\":{\"lat\":-1.4939713066293112,\"lng\":155.30273437500003},\"sw\":{\"lat\":-52.32191088594772,\"lng\":65.30273437500001}},\"prompt\":[{\"type\":\"point\",\"data\":{\"lat\":-42.488301979602255,\"lng\":146.77734375000003},\"label\":0}],\"zoom\":4,\"source_type\":\"Satellite\"}",
|
58 |
+
"isBase64Encoded": false
|
59 |
+
},
|
60 |
+
"output": {}
|
61 |
+
|
62 |
+
}
|
events/payload_point_rectangle_colico.json
ADDED
@@ -0,0 +1,48 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"input": {
|
3 |
+
"bbox": {
|
4 |
+
"ne": {
|
5 |
+
"lat": 46.302592089330524,
|
6 |
+
"lng": 9.49493408203125
|
7 |
+
},
|
8 |
+
"sw": {
|
9 |
+
"lat": 46.14011755129237,
|
10 |
+
"lng": 9.143371582031252
|
11 |
+
}
|
12 |
+
},
|
13 |
+
"prompt": [
|
14 |
+
{
|
15 |
+
"type": "rectangle",
|
16 |
+
"data": {
|
17 |
+
"lat": 46.18363372751015,
|
18 |
+
"lng": 9.443607330322267
|
19 |
+
},
|
20 |
+
"label": 1
|
21 |
+
},
|
22 |
+
{
|
23 |
+
"type": "point",
|
24 |
+
"data": {
|
25 |
+
"lat": 46.159620858924264,
|
26 |
+
"lng": 9.427127838134767
|
27 |
+
},
|
28 |
+
"label": 0
|
29 |
+
},
|
30 |
+
{
|
31 |
+
"type": "rectangle",
|
32 |
+
"data": {
|
33 |
+
"ne": {
|
34 |
+
"lat": 46.19052657426052,
|
35 |
+
"lng": 9.402408599853517
|
36 |
+
},
|
37 |
+
"sw": {
|
38 |
+
"lat": 46.15652933208947,
|
39 |
+
"lng": 9.442920684814455
|
40 |
+
}
|
41 |
+
}
|
42 |
+
}
|
43 |
+
],
|
44 |
+
"zoom": 12,
|
45 |
+
"source_type": "Satellite"
|
46 |
+
},
|
47 |
+
"output": {}
|
48 |
+
}
|
events/payload_rectangle.json
ADDED
@@ -0,0 +1,12 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"bbox": {
|
3 |
+
"ne": {"lat": 45.699, "lng": 127.1},
|
4 |
+
"sw": {"lat": 30.1, "lng": 148.492}
|
5 |
+
},
|
6 |
+
"prompt": [{
|
7 |
+
"type": "rectangle",
|
8 |
+
"data": [400, 460, 524, 628]
|
9 |
+
}],
|
10 |
+
"zoom": 6,
|
11 |
+
"source_type": "Satellite"
|
12 |
+
}
|
events/payloads_body_base64.json
ADDED
@@ -0,0 +1,52 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"version": "2.0",
|
3 |
+
"routeKey": "POST /prediction",
|
4 |
+
"rawPath": "/localhost/prediction",
|
5 |
+
"rawQueryString": "",
|
6 |
+
"headers": {
|
7 |
+
"accept": "application/json, text/plain, */*",
|
8 |
+
"accept-encoding": "gzip, deflate, br",
|
9 |
+
"accept-language": "en-GB,en-US;q=0.9,en;q=0.8",
|
10 |
+
"authorization": "Bearer ey...",
|
11 |
+
"content-length": "126",
|
12 |
+
"content-type": "application/json",
|
13 |
+
"host": "xxx.execute-api.eu-west-1.amazonaws.com",
|
14 |
+
"origin": "http://localhost:3000",
|
15 |
+
"referer": "http://localhost:3000/",
|
16 |
+
"sec-fetch-dest": "empty",
|
17 |
+
"sec-fetch-mode": "cors",
|
18 |
+
"sec-fetch-site": "cross-site",
|
19 |
+
"user-agent": "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_15_7) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/113.0.0.0 Safari/537.36",
|
20 |
+
"x-amzn-trace-id": "Root=1-xxx-aaaa",
|
21 |
+
"x-forwarded-for": "1.1.1.1",
|
22 |
+
"x-forwarded-port": "443",
|
23 |
+
"x-forwarded-proto": "https"
|
24 |
+
},
|
25 |
+
"requestContext": {
|
26 |
+
"accountId": "123",
|
27 |
+
"apiId": "api-id-aws",
|
28 |
+
"authorizer": {
|
29 |
+
"jwt": {
|
30 |
+
"claims": {
|
31 |
+
"scope": "openid profile email"
|
32 |
+
},
|
33 |
+
"scopes": null
|
34 |
+
}
|
35 |
+
},
|
36 |
+
"domainName": "xxx.execute-api.eu-west-1.amazonaws.com",
|
37 |
+
"domainPrefix": "xxx",
|
38 |
+
"http": {
|
39 |
+
"method": "POST",
|
40 |
+
"path": "/localhost/prediction",
|
41 |
+
"protocol": "HTTP/1.1",
|
42 |
+
"sourceIp": "52.143.157.36",
|
43 |
+
"userAgent": "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_15_7) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/113.0.0.0 Safari/537.36"
|
44 |
+
},
|
45 |
+
"requestId": "aaa-bbbb=",
|
46 |
+
"routeKey": "POST /prediction",
|
47 |
+
"stage": "localhost",
|
48 |
+
"time": "21/May/2023:19:32:35 +0000",
|
49 |
+
"timeEpoch": 1684697555723
|
50 |
+
},
|
51 |
+
"body": "eyJiYm94IjogWzEsIDIsIDMsIDRdLCAicG9pbnRzIjogW1s1LCA2XV19"
|
52 |
+
}
|