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  1. .gitattributes +3 -0
  2. segment_anything/.flake8 +7 -0
  3. segment_anything/CODE_OF_CONDUCT.md +80 -0
  4. segment_anything/CONTRIBUTING.md +31 -0
  5. segment_anything/LICENSE +201 -0
  6. segment_anything/README.md +107 -0
  7. segment_anything/assets/bookstore.jpg +0 -0
  8. segment_anything/assets/cats.png +0 -0
  9. segment_anything/assets/corgi.jpg +0 -0
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  11. segment_anything/assets/frame_00002.jpg +0 -0
  12. segment_anything/assets/groceries.jpg +0 -0
  13. segment_anything/assets/hourse.jpg +0 -0
  14. segment_anything/assets/masks1.png +3 -0
  15. segment_anything/assets/masks2.jpg +0 -0
  16. segment_anything/assets/model_diagram.png +0 -0
  17. segment_anything/assets/notebook1.png +0 -0
  18. segment_anything/assets/notebook2.png +3 -0
  19. segment_anything/assets/poster.png +3 -0
  20. segment_anything/assets/truck.jpg +0 -0
  21. segment_anything/linter.sh +32 -0
  22. segment_anything/notebooks/automatic_mask_generator_example.ipynb +0 -0
  23. segment_anything/notebooks/images/dog.jpg +0 -0
  24. segment_anything/notebooks/images/groceries.jpg +0 -0
  25. segment_anything/notebooks/images/truck.jpg +0 -0
  26. segment_anything/notebooks/onnx_model_example.ipynb +774 -0
  27. segment_anything/notebooks/predictor_example.ipynb +0 -0
  28. segment_anything/scripts/amg.py +238 -0
  29. segment_anything/scripts/export_onnx_model.py +204 -0
  30. segment_anything/segment_anything.egg-info/PKG-INFO +6 -0
  31. segment_anything/segment_anything.egg-info/SOURCES.txt +29 -0
  32. segment_anything/segment_anything.egg-info/dependency_links.txt +1 -0
  33. segment_anything/segment_anything.egg-info/requires.txt +13 -0
  34. segment_anything/segment_anything.egg-info/top_level.txt +1 -0
  35. segment_anything/segment_anything/__init__.py +23 -0
  36. segment_anything/segment_anything/__pycache__/__init__.cpython-38.pyc +0 -0
  37. segment_anything/segment_anything/__pycache__/automatic_mask_generator.cpython-38.pyc +0 -0
  38. segment_anything/segment_anything/__pycache__/build_sam.cpython-38.pyc +0 -0
  39. segment_anything/segment_anything/__pycache__/build_sam_hq.cpython-38.pyc +0 -0
  40. segment_anything/segment_anything/__pycache__/predictor.cpython-38.pyc +0 -0
  41. segment_anything/segment_anything/automatic_mask_generator.py +372 -0
  42. segment_anything/segment_anything/build_sam.py +111 -0
  43. segment_anything/segment_anything/build_sam_hq.py +117 -0
  44. segment_anything/segment_anything/mobile_encoder/__init__.py +0 -0
  45. segment_anything/segment_anything/mobile_encoder/__pycache__/__init__.cpython-38.pyc +0 -0
  46. segment_anything/segment_anything/mobile_encoder/__pycache__/setup_mobile_sam.cpython-38.pyc +0 -0
  47. segment_anything/segment_anything/mobile_encoder/__pycache__/tiny_vit_sam.cpython-38.pyc +0 -0
  48. segment_anything/segment_anything/mobile_encoder/setup_mobile_sam.py +51 -0
  49. segment_anything/segment_anything/mobile_encoder/tiny_vit_sam.py +716 -0
  50. segment_anything/segment_anything/modeling/__init__.py +12 -0
.gitattributes CHANGED
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  GroundingDINO/.asset/hero_figure.png filter=lfs diff=lfs merge=lfs -text
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+ segment_anything/assets/masks1.png filter=lfs diff=lfs merge=lfs -text
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+ segment_anything/assets/notebook2.png filter=lfs diff=lfs merge=lfs -text
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+ segment_anything/assets/poster.png filter=lfs diff=lfs merge=lfs -text
segment_anything/.flake8 ADDED
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+ [flake8]
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+ ignore = W503, E203, E221, C901, C408, E741, C407, B017, F811, C101, EXE001, EXE002
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+ max-line-length = 100
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+ max-complexity = 18
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+ select = B,C,E,F,W,T4,B9
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+ per-file-ignores =
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segment_anything/CODE_OF_CONDUCT.md ADDED
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+ # Code of Conduct
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+ ## Our Pledge
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+ ## Our Standards
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+ Examples of behavior that contributes to creating a positive environment
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segment_anything/CONTRIBUTING.md ADDED
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+ # Contributing to segment-anything
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+ We want to make contributing to this project as easy and transparent as
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+ ## Pull Requests
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+ ## License
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+ By contributing to segment-anything, you agree that your contributions will be licensed
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segment_anything/LICENSE ADDED
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segment_anything/README.md ADDED
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1
+ # Segment Anything
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+
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+ **[Meta AI Research, FAIR](https://ai.facebook.com/research/)**
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+
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+ [Alexander Kirillov](https://alexander-kirillov.github.io/), [Eric Mintun](https://ericmintun.github.io/), [Nikhila Ravi](https://nikhilaravi.com/), [Hanzi Mao](https://hanzimao.me/), Chloe Rolland, Laura Gustafson, [Tete Xiao](https://tetexiao.com), [Spencer Whitehead](https://www.spencerwhitehead.com/), Alex Berg, Wan-Yen Lo, [Piotr Dollar](https://pdollar.github.io/), [Ross Girshick](https://www.rossgirshick.info/)
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+
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+ [[`Paper`](https://ai.facebook.com/research/publications/segment-anything/)] [[`Project`](https://segment-anything.com/)] [[`Demo`](https://segment-anything.com/demo)] [[`Dataset`](https://segment-anything.com/dataset/index.html)] [[`Blog`](https://ai.facebook.com/blog/segment-anything-foundation-model-image-segmentation/)]
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+
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+ ![SAM design](assets/model_diagram.png?raw=true)
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+
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+ The **Segment Anything Model (SAM)** produces high quality object masks from input prompts such as points or boxes, and it can be used to generate masks for all objects in an image. It has been trained on a [dataset](https://segment-anything.com/dataset/index.html) of 11 million images and 1.1 billion masks, and has strong zero-shot performance on a variety of segmentation tasks.
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+
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+ <p float="left">
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+ <img src="assets/masks1.png?raw=true" width="37.25%" />
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+ <img src="assets/masks2.jpg?raw=true" width="61.5%" />
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+ </p>
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+
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+ ## Installation
19
+
20
+ The code requires `python>=3.8`, as well as `pytorch>=1.7` and `torchvision>=0.8`. Please follow the instructions [here](https://pytorch.org/get-started/locally/) to install both PyTorch and TorchVision dependencies. Installing both PyTorch and TorchVision with CUDA support is strongly recommended.
21
+
22
+ Install Segment Anything:
23
+
24
+ ```
25
+ pip install git+https://github.com/facebookresearch/segment-anything.git
26
+ ```
27
+
28
+ or clone the repository locally and install with
29
+
30
+ ```
31
+ git clone git@github.com:facebookresearch/segment-anything.git
32
+ cd segment-anything; pip install -e .
33
+ ```
34
+
35
+ The following optional dependencies are necessary for mask post-processing, saving masks in COCO format, the example notebooks, and exporting the model in ONNX format. `jupyter` is also required to run the example notebooks.
36
+ ```
37
+ pip install opencv-python pycocotools matplotlib onnxruntime onnx
38
+ ```
39
+
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+
41
+ ## <a name="GettingStarted"></a>Getting Started
42
+
43
+ First download a [model checkpoint](#model-checkpoints). Then the model can be used in just a few lines to get masks from a given prompt:
44
+
45
+ ```
46
+ from segment_anything import build_sam, SamPredictor
47
+ predictor = SamPredictor(build_sam(checkpoint="</path/to/model.pth>"))
48
+ predictor.set_image(<your_image>)
49
+ masks, _, _ = predictor.predict(<input_prompts>)
50
+ ```
51
+
52
+ or generate masks for an entire image:
53
+
54
+ ```
55
+ from segment_anything import build_sam, SamAutomaticMaskGenerator
56
+ mask_generator = SamAutomaticMaskGenerator(build_sam(checkpoint="</path/to/model.pth>"))
57
+ masks = mask_generator_generate(<your_image>)
58
+ ```
59
+
60
+ Additionally, masks can be generated for images from the command line:
61
+
62
+ ```
63
+ python scripts/amg.py --checkpoint <path/to/sam/checkpoint> --input <image_or_folder> --output <output_directory>
64
+ ```
65
+
66
+ See the examples notebooks on [using SAM with prompts](/notebooks/predictor_example.ipynb) and [automatically generating masks](/notebooks/automatic_mask_generator_example.ipynb) for more details.
67
+
68
+ <p float="left">
69
+ <img src="assets/notebook1.png?raw=true" width="49.1%" />
70
+ <img src="assets/notebook2.png?raw=true" width="48.9%" />
71
+ </p>
72
+
73
+ ## ONNX Export
74
+
75
+ SAM's lightweight mask decoder can be exported to ONNX format so that it can be run in any environment that supports ONNX runtime, such as in-browser as showcased in the [demo](https://segment-anything.com/demo). Export the model with
76
+
77
+ ```
78
+ python scripts/export_onnx_model.py --checkpoint <path/to/checkpoint> --output <path/to/output>
79
+ ```
80
+
81
+ See the [example notebook](https://github.com/facebookresearch/segment-anything/blob/main/notebooks/onnx_model_example.ipynb) for details on how to combine image preprocessing via SAM's backbone with mask prediction using the ONNX model. It is recommended to use the latest stable version of PyTorch for ONNX export.
82
+
83
+ ## <a name="Models"></a>Model Checkpoints
84
+
85
+ Three model versions of the model are available with different backbone sizes. These models can be instantiated by running
86
+ ```
87
+ from segment_anything import sam_model_registry
88
+ sam = sam_model_registry["<name>"](checkpoint="<path/to/checkpoint>")
89
+ ```
90
+ Click the links below to download the checkpoint for the corresponding model name. The default model in bold can also be instantiated with `build_sam`, as in the examples in [Getting Started](#getting-started).
91
+
92
+ * **`default` or `vit_h`: [ViT-H SAM model.](https://dl.fbaipublicfiles.com/segment_anything/sam_vit_h_4b8939.pth)**
93
+ * `vit_l`: [ViT-L SAM model.](https://dl.fbaipublicfiles.com/segment_anything/sam_vit_l_0b3195.pth)
94
+ * `vit_b`: [ViT-B SAM model.](https://dl.fbaipublicfiles.com/segment_anything/sam_vit_b_01ec64.pth)
95
+
96
+ ## License
97
+ The model is licensed under the [Apache 2.0 license](LICENSE).
98
+
99
+ ## Contributing
100
+
101
+ See [contributing](CONTRIBUTING.md) and the [code of conduct](CODE_OF_CONDUCT.md).
102
+
103
+ ## Contributors
104
+
105
+ The Segment Anything project was made possible with the help of many contributors (alphabetical):
106
+
107
+ Aaron Adcock, Vaibhav Aggarwal, Morteza Behrooz, Cheng-Yang Fu, Ashley Gabriel, Ahuva Goldstand, Allen Goodman, Sumanth Gurram, Jiabo Hu, Somya Jain, Devansh Kukreja, Robert Kuo, Joshua Lane, Yanghao Li, Lilian Luong, Jitendra Malik, Mallika Malhotra, William Ngan, Omkar Parkhi, Nikhil Raina, Dirk Rowe, Neil Sejoor, Vanessa Stark, Bala Varadarajan, Bram Wasti, Zachary Winstrom
segment_anything/assets/bookstore.jpg ADDED
segment_anything/assets/cats.png ADDED
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segment_anything/assets/frame_00002.jpg ADDED
segment_anything/assets/groceries.jpg ADDED
segment_anything/assets/hourse.jpg ADDED
segment_anything/assets/masks1.png ADDED

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segment_anything/assets/model_diagram.png ADDED
segment_anything/assets/notebook1.png ADDED
segment_anything/assets/notebook2.png ADDED

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segment_anything/assets/truck.jpg ADDED
segment_anything/linter.sh ADDED
@@ -0,0 +1,32 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ #!/bin/bash -e
2
+ # Copyright (c) Facebook, Inc. and its affiliates.
3
+
4
+ {
5
+ black --version | grep -E "23\." > /dev/null
6
+ } || {
7
+ echo "Linter requires 'black==23.*' !"
8
+ exit 1
9
+ }
10
+
11
+ ISORT_VERSION=$(isort --version-number)
12
+ if [[ "$ISORT_VERSION" != 5.12* ]]; then
13
+ echo "Linter requires isort==5.12.0 !"
14
+ exit 1
15
+ fi
16
+
17
+ echo "Running isort ..."
18
+ isort . --atomic
19
+
20
+ echo "Running black ..."
21
+ black -l 100 .
22
+
23
+ echo "Running flake8 ..."
24
+ if [ -x "$(command -v flake8)" ]; then
25
+ flake8 .
26
+ else
27
+ python3 -m flake8 .
28
+ fi
29
+
30
+ echo "Running mypy..."
31
+
32
+ mypy --exclude 'setup.py|notebooks' .
segment_anything/notebooks/automatic_mask_generator_example.ipynb ADDED
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segment_anything/notebooks/images/dog.jpg ADDED
segment_anything/notebooks/images/groceries.jpg ADDED
segment_anything/notebooks/images/truck.jpg ADDED
segment_anything/notebooks/onnx_model_example.ipynb ADDED
@@ -0,0 +1,774 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "cells": [
3
+ {
4
+ "cell_type": "code",
5
+ "execution_count": null,
6
+ "id": "901c8ef3",
7
+ "metadata": {},
8
+ "outputs": [],
9
+ "source": [
10
+ "# Copyright (c) Meta Platforms, Inc. and affiliates."
11
+ ]
12
+ },
13
+ {
14
+ "cell_type": "markdown",
15
+ "id": "1662bb7c",
16
+ "metadata": {},
17
+ "source": [
18
+ "# Produces masks from prompts using an ONNX model"
19
+ ]
20
+ },
21
+ {
22
+ "cell_type": "markdown",
23
+ "id": "7fcc21a0",
24
+ "metadata": {},
25
+ "source": [
26
+ "SAM's prompt encoder and mask decoder are very lightweight, which allows for efficient computation of a mask given user input. This notebook shows an example of how to export and use this lightweight component of the model in ONNX format, allowing it to run on a variety of platforms that support an ONNX runtime."
27
+ ]
28
+ },
29
+ {
30
+ "cell_type": "code",
31
+ "execution_count": 4,
32
+ "id": "86daff77",
33
+ "metadata": {},
34
+ "outputs": [
35
+ {
36
+ "data": {
37
+ "text/html": [
38
+ "\n",
39
+ "<a target=\"_blank\" href=\"https://colab.research.google.com/github/facebookresearch/segment-anything/blob/main/notebooks/onnx_model_example.ipynb\">\n",
40
+ " <img src=\"https://colab.research.google.com/assets/colab-badge.svg\" alt=\"Open In Colab\"/>\n",
41
+ "</a>\n"
42
+ ],
43
+ "text/plain": [
44
+ "<IPython.core.display.HTML object>"
45
+ ]
46
+ },
47
+ "metadata": {},
48
+ "output_type": "display_data"
49
+ }
50
+ ],
51
+ "source": [
52
+ "from IPython.display import display, HTML\n",
53
+ "display(HTML(\n",
54
+ "\"\"\"\n",
55
+ "<a target=\"_blank\" href=\"https://colab.research.google.com/github/facebookresearch/segment-anything/blob/main/notebooks/onnx_model_example.ipynb\">\n",
56
+ " <img src=\"https://colab.research.google.com/assets/colab-badge.svg\" alt=\"Open In Colab\"/>\n",
57
+ "</a>\n",
58
+ "\"\"\"\n",
59
+ "))"
60
+ ]
61
+ },
62
+ {
63
+ "cell_type": "markdown",
64
+ "id": "55ae4e00",
65
+ "metadata": {},
66
+ "source": [
67
+ "## Environment Set-up"
68
+ ]
69
+ },
70
+ {
71
+ "cell_type": "markdown",
72
+ "id": "109a5cc2",
73
+ "metadata": {},
74
+ "source": [
75
+ "If running locally using jupyter, first install `segment_anything` in your environment using the [installation instructions](https://github.com/facebookresearch/segment-anything#installation) in the repository. The latest stable versions of PyTorch and ONNX are recommended for this notebook. If running from Google Colab, set `using_collab=True` below and run the cell. In Colab, be sure to select 'GPU' under 'Edit'->'Notebook Settings'->'Hardware accelerator'."
76
+ ]
77
+ },
78
+ {
79
+ "cell_type": "code",
80
+ "execution_count": 5,
81
+ "id": "39b99fc4",
82
+ "metadata": {},
83
+ "outputs": [],
84
+ "source": [
85
+ "using_colab = False"
86
+ ]
87
+ },
88
+ {
89
+ "cell_type": "code",
90
+ "execution_count": 6,
91
+ "id": "296a69be",
92
+ "metadata": {},
93
+ "outputs": [],
94
+ "source": [
95
+ "if using_colab:\n",
96
+ " import torch\n",
97
+ " import torchvision\n",
98
+ " print(\"PyTorch version:\", torch.__version__)\n",
99
+ " print(\"Torchvision version:\", torchvision.__version__)\n",
100
+ " print(\"CUDA is available:\", torch.cuda.is_available())\n",
101
+ " import sys\n",
102
+ " !{sys.executable} -m pip install opencv-python matplotlib onnx onnxruntime\n",
103
+ " !{sys.executable} -m pip install 'git+https://github.com/facebookresearch/segment-anything.git'\n",
104
+ " \n",
105
+ " !mkdir images\n",
106
+ " !wget -P images https://raw.githubusercontent.com/facebookresearch/segment-anything/main/notebooks/images/truck.jpg\n",
107
+ " \n",
108
+ " !wget https://dl.fbaipublicfiles.com/segment_anything/sam_vit_h_4b8939.pth"
109
+ ]
110
+ },
111
+ {
112
+ "cell_type": "markdown",
113
+ "id": "dc4a58be",
114
+ "metadata": {},
115
+ "source": [
116
+ "## Set-up"
117
+ ]
118
+ },
119
+ {
120
+ "cell_type": "markdown",
121
+ "id": "42396e8d",
122
+ "metadata": {},
123
+ "source": [
124
+ "Note that this notebook requires both the `onnx` and `onnxruntime` optional dependencies, in addition to `opencv-python` and `matplotlib` for visualization."
125
+ ]
126
+ },
127
+ {
128
+ "cell_type": "code",
129
+ "execution_count": null,
130
+ "id": "2c712610",
131
+ "metadata": {},
132
+ "outputs": [],
133
+ "source": [
134
+ "import torch\n",
135
+ "import numpy as np\n",
136
+ "import cv2\n",
137
+ "import matplotlib.pyplot as plt\n",
138
+ "from segment_anything import sam_model_registry, SamPredictor\n",
139
+ "from segment_anything.utils.onnx import SamOnnxModel\n",
140
+ "\n",
141
+ "import onnxruntime\n",
142
+ "from onnxruntime.quantization import QuantType\n",
143
+ "from onnxruntime.quantization.quantize import quantize_dynamic"
144
+ ]
145
+ },
146
+ {
147
+ "cell_type": "code",
148
+ "execution_count": null,
149
+ "id": "f29441b9",
150
+ "metadata": {},
151
+ "outputs": [],
152
+ "source": [
153
+ "def show_mask(mask, ax):\n",
154
+ " color = np.array([30/255, 144/255, 255/255, 0.6])\n",
155
+ " h, w = mask.shape[-2:]\n",
156
+ " mask_image = mask.reshape(h, w, 1) * color.reshape(1, 1, -1)\n",
157
+ " ax.imshow(mask_image)\n",
158
+ " \n",
159
+ "def show_points(coords, labels, ax, marker_size=375):\n",
160
+ " pos_points = coords[labels==1]\n",
161
+ " neg_points = coords[labels==0]\n",
162
+ " ax.scatter(pos_points[:, 0], pos_points[:, 1], color='green', marker='*', s=marker_size, edgecolor='white', linewidth=1.25)\n",
163
+ " ax.scatter(neg_points[:, 0], neg_points[:, 1], color='red', marker='*', s=marker_size, edgecolor='white', linewidth=1.25) \n",
164
+ " \n",
165
+ "def show_box(box, ax):\n",
166
+ " x0, y0 = box[0], box[1]\n",
167
+ " w, h = box[2] - box[0], box[3] - box[1]\n",
168
+ " ax.add_patch(plt.Rectangle((x0, y0), w, h, edgecolor='green', facecolor=(0,0,0,0), lw=2)) "
169
+ ]
170
+ },
171
+ {
172
+ "cell_type": "markdown",
173
+ "id": "bd0f6b2b",
174
+ "metadata": {},
175
+ "source": [
176
+ "## Export an ONNX model"
177
+ ]
178
+ },
179
+ {
180
+ "cell_type": "markdown",
181
+ "id": "1540f719",
182
+ "metadata": {},
183
+ "source": [
184
+ "Set the path below to a SAM model checkpoint, then load the model. This will be needed to both export the model and to calculate embeddings for the model."
185
+ ]
186
+ },
187
+ {
188
+ "cell_type": "code",
189
+ "execution_count": null,
190
+ "id": "76fc53f4",
191
+ "metadata": {},
192
+ "outputs": [],
193
+ "source": [
194
+ "checkpoint = \"sam_vit_h_4b8939.pth\"\n",
195
+ "model_type = \"default\""
196
+ ]
197
+ },
198
+ {
199
+ "cell_type": "code",
200
+ "execution_count": null,
201
+ "id": "11bfc8aa",
202
+ "metadata": {},
203
+ "outputs": [],
204
+ "source": [
205
+ "sam = sam_model_registry[model_type](checkpoint=checkpoint)"
206
+ ]
207
+ },
208
+ {
209
+ "cell_type": "markdown",
210
+ "id": "450c089c",
211
+ "metadata": {},
212
+ "source": [
213
+ "The script `segment-anything/scripts/export_onnx_model.py` can be used to export the necessary portion of SAM. Alternatively, run the following code to export an ONNX model. If you have already exported a model, set the path below and skip to the next section. Assure that the exported ONNX model aligns with the checkpoint and model type set above. This notebook expects the model was exported with the parameter `return_single_mask=True`."
214
+ ]
215
+ },
216
+ {
217
+ "cell_type": "code",
218
+ "execution_count": null,
219
+ "id": "38a8add8",
220
+ "metadata": {},
221
+ "outputs": [],
222
+ "source": [
223
+ "onnx_model_path = None # Set to use an already exported model, then skip to the next section."
224
+ ]
225
+ },
226
+ {
227
+ "cell_type": "code",
228
+ "execution_count": null,
229
+ "id": "7da638ba",
230
+ "metadata": {
231
+ "scrolled": false
232
+ },
233
+ "outputs": [],
234
+ "source": [
235
+ "import warnings\n",
236
+ "\n",
237
+ "onnx_model_path = \"sam_onnx_example.onnx\"\n",
238
+ "\n",
239
+ "onnx_model = SamOnnxModel(sam, return_single_mask=True)\n",
240
+ "\n",
241
+ "dynamic_axes = {\n",
242
+ " \"point_coords\": {1: \"num_points\"},\n",
243
+ " \"point_labels\": {1: \"num_points\"},\n",
244
+ "}\n",
245
+ "\n",
246
+ "embed_dim = sam.prompt_encoder.embed_dim\n",
247
+ "embed_size = sam.prompt_encoder.image_embedding_size\n",
248
+ "mask_input_size = [4 * x for x in embed_size]\n",
249
+ "dummy_inputs = {\n",
250
+ " \"image_embeddings\": torch.randn(1, embed_dim, *embed_size, dtype=torch.float),\n",
251
+ " \"point_coords\": torch.randint(low=0, high=1024, size=(1, 5, 2), dtype=torch.float),\n",
252
+ " \"point_labels\": torch.randint(low=0, high=4, size=(1, 5), dtype=torch.float),\n",
253
+ " \"mask_input\": torch.randn(1, 1, *mask_input_size, dtype=torch.float),\n",
254
+ " \"has_mask_input\": torch.tensor([1], dtype=torch.float),\n",
255
+ " \"orig_im_size\": torch.tensor([1500, 2250], dtype=torch.float),\n",
256
+ "}\n",
257
+ "output_names = [\"masks\", \"iou_predictions\", \"low_res_masks\"]\n",
258
+ "\n",
259
+ "with warnings.catch_warnings():\n",
260
+ " warnings.filterwarnings(\"ignore\", category=torch.jit.TracerWarning)\n",
261
+ " warnings.filterwarnings(\"ignore\", category=UserWarning)\n",
262
+ " with open(onnx_model_path, \"wb\") as f:\n",
263
+ " torch.onnx.export(\n",
264
+ " onnx_model,\n",
265
+ " tuple(dummy_inputs.values()),\n",
266
+ " f,\n",
267
+ " export_params=True,\n",
268
+ " verbose=False,\n",
269
+ " opset_version=17,\n",
270
+ " do_constant_folding=True,\n",
271
+ " input_names=list(dummy_inputs.keys()),\n",
272
+ " output_names=output_names,\n",
273
+ " dynamic_axes=dynamic_axes,\n",
274
+ " ) "
275
+ ]
276
+ },
277
+ {
278
+ "cell_type": "markdown",
279
+ "id": "c450cf1a",
280
+ "metadata": {},
281
+ "source": [
282
+ "If desired, the model can additionally be quantized and optimized. We find this improves web runtime significantly for negligible change in qualitative performance. Run the next cell to quantize the model, or skip to the next section otherwise."
283
+ ]
284
+ },
285
+ {
286
+ "cell_type": "code",
287
+ "execution_count": null,
288
+ "id": "235d39fe",
289
+ "metadata": {},
290
+ "outputs": [],
291
+ "source": [
292
+ "onnx_model_quantized_path = \"sam_onnx_quantized_example.onnx\"\n",
293
+ "quantize_dynamic(\n",
294
+ " model_input=onnx_model_path,\n",
295
+ " model_output=onnx_model_quantized_path,\n",
296
+ " optimize_model=True,\n",
297
+ " per_channel=False,\n",
298
+ " reduce_range=False,\n",
299
+ " weight_type=QuantType.QUInt8,\n",
300
+ ")\n",
301
+ "onnx_model_path = onnx_model_quantized_path"
302
+ ]
303
+ },
304
+ {
305
+ "cell_type": "markdown",
306
+ "id": "927a928b",
307
+ "metadata": {},
308
+ "source": [
309
+ "## Example Image"
310
+ ]
311
+ },
312
+ {
313
+ "cell_type": "code",
314
+ "execution_count": null,
315
+ "id": "6be6eb55",
316
+ "metadata": {},
317
+ "outputs": [],
318
+ "source": [
319
+ "image = cv2.imread('images/truck.jpg')\n",
320
+ "image = cv2.cvtColor(image, cv2.COLOR_BGR2RGB)"
321
+ ]
322
+ },
323
+ {
324
+ "cell_type": "code",
325
+ "execution_count": null,
326
+ "id": "b7e9a27a",
327
+ "metadata": {},
328
+ "outputs": [],
329
+ "source": [
330
+ "plt.figure(figsize=(10,10))\n",
331
+ "plt.imshow(image)\n",
332
+ "plt.axis('on')\n",
333
+ "plt.show()"
334
+ ]
335
+ },
336
+ {
337
+ "cell_type": "markdown",
338
+ "id": "027b177b",
339
+ "metadata": {},
340
+ "source": [
341
+ "## Using an ONNX model"
342
+ ]
343
+ },
344
+ {
345
+ "cell_type": "markdown",
346
+ "id": "778d4593",
347
+ "metadata": {},
348
+ "source": [
349
+ "Here as an example, we use `onnxruntime` in python on CPU to execute the ONNX model. However, any platform that supports an ONNX runtime could be used in principle. Launch the runtime session below:"
350
+ ]
351
+ },
352
+ {
353
+ "cell_type": "code",
354
+ "execution_count": null,
355
+ "id": "9689b1bf",
356
+ "metadata": {},
357
+ "outputs": [],
358
+ "source": [
359
+ "ort_session = onnxruntime.InferenceSession(onnx_model_path)"
360
+ ]
361
+ },
362
+ {
363
+ "cell_type": "markdown",
364
+ "id": "7708ead6",
365
+ "metadata": {},
366
+ "source": [
367
+ "To use the ONNX model, the image must first be pre-processed using the SAM image encoder. This is a heavier weight process best performed on GPU. SamPredictor can be used as normal, then `.get_image_embedding()` will retreive the intermediate features."
368
+ ]
369
+ },
370
+ {
371
+ "cell_type": "code",
372
+ "execution_count": null,
373
+ "id": "26e067b4",
374
+ "metadata": {},
375
+ "outputs": [],
376
+ "source": [
377
+ "sam.to(device='cuda')\n",
378
+ "predictor = SamPredictor(sam)"
379
+ ]
380
+ },
381
+ {
382
+ "cell_type": "code",
383
+ "execution_count": null,
384
+ "id": "7ad3f0d6",
385
+ "metadata": {},
386
+ "outputs": [],
387
+ "source": [
388
+ "predictor.set_image(image)"
389
+ ]
390
+ },
391
+ {
392
+ "cell_type": "code",
393
+ "execution_count": null,
394
+ "id": "8a6f0f07",
395
+ "metadata": {},
396
+ "outputs": [],
397
+ "source": [
398
+ "image_embedding = predictor.get_image_embedding().cpu().numpy()"
399
+ ]
400
+ },
401
+ {
402
+ "cell_type": "code",
403
+ "execution_count": null,
404
+ "id": "5e112f33",
405
+ "metadata": {},
406
+ "outputs": [],
407
+ "source": [
408
+ "image_embedding.shape"
409
+ ]
410
+ },
411
+ {
412
+ "cell_type": "markdown",
413
+ "id": "6337b654",
414
+ "metadata": {},
415
+ "source": [
416
+ "The ONNX model has a different input signature than `SamPredictor.predict`. The following inputs must all be supplied. Note the special cases for both point and mask inputs. All inputs are `np.float32`.\n",
417
+ "* `image_embeddings`: The image embedding from `predictor.get_image_embedding()`. Has a batch index of length 1.\n",
418
+ "* `point_coords`: Coordinates of sparse input prompts, corresponding to both point inputs and box inputs. Boxes are encoded using two points, one for the top-left corner and one for the bottom-right corner. *Coordinates must already be transformed to long-side 1024.* Has a batch index of length 1.\n",
419
+ "* `point_labels`: Labels for the sparse input prompts. 0 is a negative input point, 1 is a positive input point, 2 is a top-left box corner, 3 is a bottom-right box corner, and -1 is a padding point. *If there is no box input, a single padding point with label -1 and coordinates (0.0, 0.0) should be concatenated.*\n",
420
+ "* `mask_input`: A mask input to the model with shape 1x1x256x256. This must be supplied even if there is no mask input. In this case, it can just be zeros.\n",
421
+ "* `has_mask_input`: An indicator for the mask input. 1 indicates a mask input, 0 indicates no mask input.\n",
422
+ "* `orig_im_size`: The size of the input image in (H,W) format, before any transformation. \n",
423
+ "\n",
424
+ "Additionally, the ONNX model does not threshold the output mask logits. To obtain a binary mask, threshold at `sam.mask_threshold` (equal to 0.0)."
425
+ ]
426
+ },
427
+ {
428
+ "cell_type": "markdown",
429
+ "id": "bf5a9f55",
430
+ "metadata": {},
431
+ "source": [
432
+ "### Example point input"
433
+ ]
434
+ },
435
+ {
436
+ "cell_type": "code",
437
+ "execution_count": null,
438
+ "id": "1c0deef0",
439
+ "metadata": {},
440
+ "outputs": [],
441
+ "source": [
442
+ "input_point = np.array([[500, 375]])\n",
443
+ "input_label = np.array([1])"
444
+ ]
445
+ },
446
+ {
447
+ "cell_type": "markdown",
448
+ "id": "7256394c",
449
+ "metadata": {},
450
+ "source": [
451
+ "Add a batch index, concatenate a padding point, and transform."
452
+ ]
453
+ },
454
+ {
455
+ "cell_type": "code",
456
+ "execution_count": null,
457
+ "id": "4f69903e",
458
+ "metadata": {},
459
+ "outputs": [],
460
+ "source": [
461
+ "onnx_coord = np.concatenate([input_point, np.array([[0.0, 0.0]])], axis=0)[None, :, :]\n",
462
+ "onnx_label = np.concatenate([input_label, np.array([-1])], axis=0)[None, :].astype(np.float32)\n",
463
+ "\n",
464
+ "onnx_coord = predictor.transform.apply_coords(onnx_coord, image.shape[:2]).astype(np.float32)\n"
465
+ ]
466
+ },
467
+ {
468
+ "cell_type": "markdown",
469
+ "id": "b188dc53",
470
+ "metadata": {},
471
+ "source": [
472
+ "Create an empty mask input and an indicator for no mask."
473
+ ]
474
+ },
475
+ {
476
+ "cell_type": "code",
477
+ "execution_count": null,
478
+ "id": "5cb52bcf",
479
+ "metadata": {},
480
+ "outputs": [],
481
+ "source": [
482
+ "onnx_mask_input = np.zeros((1, 1, 256, 256), dtype=np.float32)\n",
483
+ "onnx_has_mask_input = np.zeros(1, dtype=np.float32)"
484
+ ]
485
+ },
486
+ {
487
+ "cell_type": "markdown",
488
+ "id": "a99c2cc5",
489
+ "metadata": {},
490
+ "source": [
491
+ "Package the inputs to run in the onnx model"
492
+ ]
493
+ },
494
+ {
495
+ "cell_type": "code",
496
+ "execution_count": null,
497
+ "id": "b1d7ea11",
498
+ "metadata": {},
499
+ "outputs": [],
500
+ "source": [
501
+ "ort_inputs = {\n",
502
+ " \"image_embeddings\": image_embedding,\n",
503
+ " \"point_coords\": onnx_coord,\n",
504
+ " \"point_labels\": onnx_label,\n",
505
+ " \"mask_input\": onnx_mask_input,\n",
506
+ " \"has_mask_input\": onnx_has_mask_input,\n",
507
+ " \"orig_im_size\": np.array(image.shape[:2], dtype=np.float32)\n",
508
+ "}"
509
+ ]
510
+ },
511
+ {
512
+ "cell_type": "markdown",
513
+ "id": "4b6409c9",
514
+ "metadata": {},
515
+ "source": [
516
+ "Predict a mask and threshold it."
517
+ ]
518
+ },
519
+ {
520
+ "cell_type": "code",
521
+ "execution_count": null,
522
+ "id": "dc4cc082",
523
+ "metadata": {
524
+ "scrolled": false
525
+ },
526
+ "outputs": [],
527
+ "source": [
528
+ "masks, _, low_res_logits = ort_session.run(None, ort_inputs)\n",
529
+ "masks = masks > predictor.model.mask_threshold"
530
+ ]
531
+ },
532
+ {
533
+ "cell_type": "code",
534
+ "execution_count": null,
535
+ "id": "d778a8fb",
536
+ "metadata": {},
537
+ "outputs": [],
538
+ "source": [
539
+ "masks.shape"
540
+ ]
541
+ },
542
+ {
543
+ "cell_type": "code",
544
+ "execution_count": null,
545
+ "id": "badb1175",
546
+ "metadata": {},
547
+ "outputs": [],
548
+ "source": [
549
+ "plt.figure(figsize=(10,10))\n",
550
+ "plt.imshow(image)\n",
551
+ "show_mask(masks, plt.gca())\n",
552
+ "show_points(input_point, input_label, plt.gca())\n",
553
+ "plt.axis('off')\n",
554
+ "plt.show() "
555
+ ]
556
+ },
557
+ {
558
+ "cell_type": "markdown",
559
+ "id": "1f1d4d15",
560
+ "metadata": {},
561
+ "source": [
562
+ "### Example mask input"
563
+ ]
564
+ },
565
+ {
566
+ "cell_type": "code",
567
+ "execution_count": null,
568
+ "id": "b319da82",
569
+ "metadata": {},
570
+ "outputs": [],
571
+ "source": [
572
+ "input_point = np.array([[500, 375], [1125, 625]])\n",
573
+ "input_label = np.array([1, 1])\n",
574
+ "\n",
575
+ "# Use the mask output from the previous run. It is already in the correct form for input to the ONNX model.\n",
576
+ "onnx_mask_input = low_res_logits"
577
+ ]
578
+ },
579
+ {
580
+ "cell_type": "markdown",
581
+ "id": "b1823b37",
582
+ "metadata": {},
583
+ "source": [
584
+ "Transform the points as in the previous example."
585
+ ]
586
+ },
587
+ {
588
+ "cell_type": "code",
589
+ "execution_count": null,
590
+ "id": "8885130f",
591
+ "metadata": {},
592
+ "outputs": [],
593
+ "source": [
594
+ "onnx_coord = np.concatenate([input_point, np.array([[0.0, 0.0]])], axis=0)[None, :, :]\n",
595
+ "onnx_label = np.concatenate([input_label, np.array([-1])], axis=0)[None, :].astype(np.float32)\n",
596
+ "\n",
597
+ "onnx_coord = predictor.transform.apply_coords(onnx_coord, image.shape[:2]).astype(np.float32)"
598
+ ]
599
+ },
600
+ {
601
+ "cell_type": "markdown",
602
+ "id": "28e47b69",
603
+ "metadata": {},
604
+ "source": [
605
+ "The `has_mask_input` indicator is now 1."
606
+ ]
607
+ },
608
+ {
609
+ "cell_type": "code",
610
+ "execution_count": null,
611
+ "id": "3ab4483a",
612
+ "metadata": {},
613
+ "outputs": [],
614
+ "source": [
615
+ "onnx_has_mask_input = np.ones(1, dtype=np.float32)"
616
+ ]
617
+ },
618
+ {
619
+ "cell_type": "markdown",
620
+ "id": "d3781955",
621
+ "metadata": {},
622
+ "source": [
623
+ "Package inputs, then predict and threshold the mask."
624
+ ]
625
+ },
626
+ {
627
+ "cell_type": "code",
628
+ "execution_count": null,
629
+ "id": "0c1ec096",
630
+ "metadata": {},
631
+ "outputs": [],
632
+ "source": [
633
+ "ort_inputs = {\n",
634
+ " \"image_embeddings\": image_embedding,\n",
635
+ " \"point_coords\": onnx_coord,\n",
636
+ " \"point_labels\": onnx_label,\n",
637
+ " \"mask_input\": onnx_mask_input,\n",
638
+ " \"has_mask_input\": onnx_has_mask_input,\n",
639
+ " \"orig_im_size\": np.array(image.shape[:2], dtype=np.float32)\n",
640
+ "}\n",
641
+ "\n",
642
+ "masks, _, _ = ort_session.run(None, ort_inputs)\n",
643
+ "masks = masks > predictor.model.mask_threshold"
644
+ ]
645
+ },
646
+ {
647
+ "cell_type": "code",
648
+ "execution_count": null,
649
+ "id": "1e36554b",
650
+ "metadata": {},
651
+ "outputs": [],
652
+ "source": [
653
+ "plt.figure(figsize=(10,10))\n",
654
+ "plt.imshow(image)\n",
655
+ "show_mask(masks, plt.gca())\n",
656
+ "show_points(input_point, input_label, plt.gca())\n",
657
+ "plt.axis('off')\n",
658
+ "plt.show() "
659
+ ]
660
+ },
661
+ {
662
+ "cell_type": "markdown",
663
+ "id": "2ef211d0",
664
+ "metadata": {},
665
+ "source": [
666
+ "### Example box and point input"
667
+ ]
668
+ },
669
+ {
670
+ "cell_type": "code",
671
+ "execution_count": null,
672
+ "id": "51e58d2e",
673
+ "metadata": {},
674
+ "outputs": [],
675
+ "source": [
676
+ "input_box = np.array([425, 600, 700, 875])\n",
677
+ "input_point = np.array([[575, 750]])\n",
678
+ "input_label = np.array([0])"
679
+ ]
680
+ },
681
+ {
682
+ "cell_type": "markdown",
683
+ "id": "6e119dcb",
684
+ "metadata": {},
685
+ "source": [
686
+ "Add a batch index, concatenate a box and point inputs, add the appropriate labels for the box corners, and transform. There is no padding point since the input includes a box input."
687
+ ]
688
+ },
689
+ {
690
+ "cell_type": "code",
691
+ "execution_count": null,
692
+ "id": "bfbe4911",
693
+ "metadata": {},
694
+ "outputs": [],
695
+ "source": [
696
+ "onnx_box_coords = input_box.reshape(2, 2)\n",
697
+ "onnx_box_labels = np.array([2,3])\n",
698
+ "\n",
699
+ "onnx_coord = np.concatenate([input_point, onnx_box_coords], axis=0)[None, :, :]\n",
700
+ "onnx_label = np.concatenate([input_label, onnx_box_labels], axis=0)[None, :].astype(np.float32)\n",
701
+ "\n",
702
+ "onnx_coord = predictor.transform.apply_coords(onnx_coord, image.shape[:2]).astype(np.float32)"
703
+ ]
704
+ },
705
+ {
706
+ "cell_type": "markdown",
707
+ "id": "65edabd2",
708
+ "metadata": {},
709
+ "source": [
710
+ "Package inputs, then predict and threshold the mask."
711
+ ]
712
+ },
713
+ {
714
+ "cell_type": "code",
715
+ "execution_count": null,
716
+ "id": "2abfba56",
717
+ "metadata": {},
718
+ "outputs": [],
719
+ "source": [
720
+ "onnx_mask_input = np.zeros((1, 1, 256, 256), dtype=np.float32)\n",
721
+ "onnx_has_mask_input = np.zeros(1, dtype=np.float32)\n",
722
+ "\n",
723
+ "ort_inputs = {\n",
724
+ " \"image_embeddings\": image_embedding,\n",
725
+ " \"point_coords\": onnx_coord,\n",
726
+ " \"point_labels\": onnx_label,\n",
727
+ " \"mask_input\": onnx_mask_input,\n",
728
+ " \"has_mask_input\": onnx_has_mask_input,\n",
729
+ " \"orig_im_size\": np.array(image.shape[:2], dtype=np.float32)\n",
730
+ "}\n",
731
+ "\n",
732
+ "masks, _, _ = ort_session.run(None, ort_inputs)\n",
733
+ "masks = masks > predictor.model.mask_threshold"
734
+ ]
735
+ },
736
+ {
737
+ "cell_type": "code",
738
+ "execution_count": null,
739
+ "id": "8301bf33",
740
+ "metadata": {},
741
+ "outputs": [],
742
+ "source": [
743
+ "plt.figure(figsize=(10, 10))\n",
744
+ "plt.imshow(image)\n",
745
+ "show_mask(masks[0], plt.gca())\n",
746
+ "show_box(input_box, plt.gca())\n",
747
+ "show_points(input_point, input_label, plt.gca())\n",
748
+ "plt.axis('off')\n",
749
+ "plt.show()"
750
+ ]
751
+ }
752
+ ],
753
+ "metadata": {
754
+ "kernelspec": {
755
+ "display_name": "Python 3 (ipykernel)",
756
+ "language": "python",
757
+ "name": "python3"
758
+ },
759
+ "language_info": {
760
+ "codemirror_mode": {
761
+ "name": "ipython",
762
+ "version": 3
763
+ },
764
+ "file_extension": ".py",
765
+ "mimetype": "text/x-python",
766
+ "name": "python",
767
+ "nbconvert_exporter": "python",
768
+ "pygments_lexer": "ipython3",
769
+ "version": "3.10.10"
770
+ }
771
+ },
772
+ "nbformat": 4,
773
+ "nbformat_minor": 5
774
+ }
segment_anything/notebooks/predictor_example.ipynb ADDED
The diff for this file is too large to render. See raw diff
 
segment_anything/scripts/amg.py ADDED
@@ -0,0 +1,238 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Copyright (c) Meta Platforms, Inc. and affiliates.
2
+ # All rights reserved.
3
+
4
+ # This source code is licensed under the license found in the
5
+ # LICENSE file in the root directory of this source tree.
6
+
7
+ import cv2 # type: ignore
8
+
9
+ from segment_anything import SamAutomaticMaskGenerator, sam_model_registry
10
+
11
+ import argparse
12
+ import json
13
+ import os
14
+ from typing import Any, Dict, List
15
+
16
+ parser = argparse.ArgumentParser(
17
+ description=(
18
+ "Runs automatic mask generation on an input image or directory of images, "
19
+ "and outputs masks as either PNGs or COCO-style RLEs. Requires open-cv, "
20
+ "as well as pycocotools if saving in RLE format."
21
+ )
22
+ )
23
+
24
+ parser.add_argument(
25
+ "--input",
26
+ type=str,
27
+ required=True,
28
+ help="Path to either a single input image or folder of images.",
29
+ )
30
+
31
+ parser.add_argument(
32
+ "--output",
33
+ type=str,
34
+ required=True,
35
+ help=(
36
+ "Path to the directory where masks will be output. Output will be either a folder "
37
+ "of PNGs per image or a single json with COCO-style masks."
38
+ ),
39
+ )
40
+
41
+ parser.add_argument(
42
+ "--model-type",
43
+ type=str,
44
+ default="default",
45
+ help="The type of model to load, in ['default', 'vit_l', 'vit_b']",
46
+ )
47
+
48
+ parser.add_argument(
49
+ "--checkpoint",
50
+ type=str,
51
+ required=True,
52
+ help="The path to the SAM checkpoint to use for mask generation.",
53
+ )
54
+
55
+ parser.add_argument("--device", type=str, default="cuda", help="The device to run generation on.")
56
+
57
+ parser.add_argument(
58
+ "--convert-to-rle",
59
+ action="store_true",
60
+ help=(
61
+ "Save masks as COCO RLEs in a single json instead of as a folder of PNGs. "
62
+ "Requires pycocotools."
63
+ ),
64
+ )
65
+
66
+ amg_settings = parser.add_argument_group("AMG Settings")
67
+
68
+ amg_settings.add_argument(
69
+ "--points-per-side",
70
+ type=int,
71
+ default=None,
72
+ help="Generate masks by sampling a grid over the image with this many points to a side.",
73
+ )
74
+
75
+ amg_settings.add_argument(
76
+ "--points-per-batch",
77
+ type=int,
78
+ default=None,
79
+ help="How many input points to process simultaneously in one batch.",
80
+ )
81
+
82
+ amg_settings.add_argument(
83
+ "--pred-iou-thresh",
84
+ type=float,
85
+ default=None,
86
+ help="Exclude masks with a predicted score from the model that is lower than this threshold.",
87
+ )
88
+
89
+ amg_settings.add_argument(
90
+ "--stability-score-thresh",
91
+ type=float,
92
+ default=None,
93
+ help="Exclude masks with a stability score lower than this threshold.",
94
+ )
95
+
96
+ amg_settings.add_argument(
97
+ "--stability-score-offset",
98
+ type=float,
99
+ default=None,
100
+ help="Larger values perturb the mask more when measuring stability score.",
101
+ )
102
+
103
+ amg_settings.add_argument(
104
+ "--box-nms-thresh",
105
+ type=float,
106
+ default=None,
107
+ help="The overlap threshold for excluding a duplicate mask.",
108
+ )
109
+
110
+ amg_settings.add_argument(
111
+ "--crop-n-layers",
112
+ type=int,
113
+ default=None,
114
+ help=(
115
+ "If >0, mask generation is run on smaller crops of the image to generate more masks. "
116
+ "The value sets how many different scales to crop at."
117
+ ),
118
+ )
119
+
120
+ amg_settings.add_argument(
121
+ "--crop-nms-thresh",
122
+ type=float,
123
+ default=None,
124
+ help="The overlap threshold for excluding duplicate masks across different crops.",
125
+ )
126
+
127
+ amg_settings.add_argument(
128
+ "--crop-overlap-ratio",
129
+ type=int,
130
+ default=None,
131
+ help="Larger numbers mean image crops will overlap more.",
132
+ )
133
+
134
+ amg_settings.add_argument(
135
+ "--crop-n-points-downscale-factor",
136
+ type=int,
137
+ default=None,
138
+ help="The number of points-per-side in each layer of crop is reduced by this factor.",
139
+ )
140
+
141
+ amg_settings.add_argument(
142
+ "--min-mask-region-area",
143
+ type=int,
144
+ default=None,
145
+ help=(
146
+ "Disconnected mask regions or holes with area smaller than this value "
147
+ "in pixels are removed by postprocessing."
148
+ ),
149
+ )
150
+
151
+
152
+ def write_masks_to_folder(masks: List[Dict[str, Any]], path: str) -> None:
153
+ header = "id,area,bbox_x0,bbox_y0,bbox_w,bbox_h,point_input_x,point_input_y,predicted_iou,stability_score,crop_box_x0,crop_box_y0,crop_box_w,crop_box_h" # noqa
154
+ metadata = [header]
155
+ for i, mask_data in enumerate(masks):
156
+ mask = mask_data["segmentation"]
157
+ filename = f"{i}.png"
158
+ cv2.imwrite(os.path.join(path, filename), mask * 255)
159
+ mask_metadata = [
160
+ str(i),
161
+ str(mask_data["area"]),
162
+ *[str(x) for x in mask_data["bbox"]],
163
+ *[str(x) for x in mask_data["point_coords"][0]],
164
+ str(mask_data["predicted_iou"]),
165
+ str(mask_data["stability_score"]),
166
+ *[str(x) for x in mask_data["crop_box"]],
167
+ ]
168
+ row = ",".join(mask_metadata)
169
+ metadata.append(row)
170
+ metadata_path = os.path.join(path, "metadata.csv")
171
+ with open(metadata_path, "w") as f:
172
+ f.write("\n".join(metadata))
173
+
174
+ return
175
+
176
+
177
+ def get_amg_kwargs(args):
178
+ amg_kwargs = {
179
+ "points_per_side": args.points_per_side,
180
+ "points_per_batch": args.points_per_batch,
181
+ "pred_iou_thresh": args.pred_iou_thresh,
182
+ "stability_score_thresh": args.stability_score_thresh,
183
+ "stability_score_offset": args.stability_score_offset,
184
+ "box_nms_thresh": args.box_nms_thresh,
185
+ "crop_n_layers": args.crop_n_layers,
186
+ "crop_nms_thresh": args.crop_nms_thresh,
187
+ "crop_overlap_ratio": args.crop_overlap_ratio,
188
+ "crop_n_points_downscale_factor": args.crop_n_points_downscale_factor,
189
+ "min_mask_region_area": args.min_mask_region_area,
190
+ }
191
+ amg_kwargs = {k: v for k, v in amg_kwargs.items() if v is not None}
192
+ return amg_kwargs
193
+
194
+
195
+ def main(args: argparse.Namespace) -> None:
196
+ print("Loading model...")
197
+ sam = sam_model_registry[args.model_type](checkpoint=args.checkpoint)
198
+ _ = sam.to(device=args.device)
199
+ output_mode = "coco_rle" if args.convert_to_rle else "binary_mask"
200
+ amg_kwargs = get_amg_kwargs(args)
201
+ generator = SamAutomaticMaskGenerator(sam, output_mode=output_mode, **amg_kwargs)
202
+
203
+ if not os.path.isdir(args.input):
204
+ targets = [args.input]
205
+ else:
206
+ targets = [
207
+ f for f in os.listdir(args.input) if not os.path.isdir(os.path.join(args.input, f))
208
+ ]
209
+ targets = [os.path.join(args.input, f) for f in targets]
210
+
211
+ os.makedirs(args.output, exist_ok=True)
212
+
213
+ for t in targets:
214
+ print(f"Processing '{t}'...")
215
+ image = cv2.imread(t)
216
+ if image is None:
217
+ print(f"Could not load '{t}' as an image, skipping...")
218
+ continue
219
+ image = cv2.cvtColor(image, cv2.COLOR_BGR2RGB)
220
+
221
+ masks = generator.generate(image)
222
+
223
+ base = os.path.basename(t)
224
+ base = os.path.splitext(base)[0]
225
+ save_base = os.path.join(args.output, base)
226
+ if output_mode == "binary_mask":
227
+ os.makedirs(save_base, exist_ok=False)
228
+ write_masks_to_folder(masks, save_base)
229
+ else:
230
+ save_file = save_base + ".json"
231
+ with open(save_file, "w") as f:
232
+ json.dump(masks, f)
233
+ print("Done!")
234
+
235
+
236
+ if __name__ == "__main__":
237
+ args = parser.parse_args()
238
+ main(args)
segment_anything/scripts/export_onnx_model.py ADDED
@@ -0,0 +1,204 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Copyright (c) Meta Platforms, Inc. and affiliates.
2
+ # All rights reserved.
3
+
4
+ # This source code is licensed under the license found in the
5
+ # LICENSE file in the root directory of this source tree.
6
+
7
+ import torch
8
+
9
+ from segment_anything import build_sam, build_sam_vit_b, build_sam_vit_l
10
+ from segment_anything.utils.onnx import SamOnnxModel
11
+
12
+ import argparse
13
+ import warnings
14
+
15
+ try:
16
+ import onnxruntime # type: ignore
17
+
18
+ onnxruntime_exists = True
19
+ except ImportError:
20
+ onnxruntime_exists = False
21
+
22
+ parser = argparse.ArgumentParser(
23
+ description="Export the SAM prompt encoder and mask decoder to an ONNX model."
24
+ )
25
+
26
+ parser.add_argument(
27
+ "--checkpoint", type=str, required=True, help="The path to the SAM model checkpoint."
28
+ )
29
+
30
+ parser.add_argument(
31
+ "--output", type=str, required=True, help="The filename to save the ONNX model to."
32
+ )
33
+
34
+ parser.add_argument(
35
+ "--model-type",
36
+ type=str,
37
+ default="default",
38
+ help="In ['default', 'vit_b', 'vit_l']. Which type of SAM model to export.",
39
+ )
40
+
41
+ parser.add_argument(
42
+ "--return-single-mask",
43
+ action="store_true",
44
+ help=(
45
+ "If true, the exported ONNX model will only return the best mask, "
46
+ "instead of returning multiple masks. For high resolution images "
47
+ "this can improve runtime when upscaling masks is expensive."
48
+ ),
49
+ )
50
+
51
+ parser.add_argument(
52
+ "--opset",
53
+ type=int,
54
+ default=17,
55
+ help="The ONNX opset version to use. Must be >=11",
56
+ )
57
+
58
+ parser.add_argument(
59
+ "--quantize-out",
60
+ type=str,
61
+ default=None,
62
+ help=(
63
+ "If set, will quantize the model and save it with this name. "
64
+ "Quantization is performed with quantize_dynamic from onnxruntime.quantization.quantize."
65
+ ),
66
+ )
67
+
68
+ parser.add_argument(
69
+ "--gelu-approximate",
70
+ action="store_true",
71
+ help=(
72
+ "Replace GELU operations with approximations using tanh. Useful "
73
+ "for some runtimes that have slow or unimplemented erf ops, used in GELU."
74
+ ),
75
+ )
76
+
77
+ parser.add_argument(
78
+ "--use-stability-score",
79
+ action="store_true",
80
+ help=(
81
+ "Replaces the model's predicted mask quality score with the stability "
82
+ "score calculated on the low resolution masks using an offset of 1.0. "
83
+ ),
84
+ )
85
+
86
+ parser.add_argument(
87
+ "--return-extra-metrics",
88
+ action="store_true",
89
+ help=(
90
+ "The model will return five results: (masks, scores, stability_scores, "
91
+ "areas, low_res_logits) instead of the usual three. This can be "
92
+ "significantly slower for high resolution outputs."
93
+ ),
94
+ )
95
+
96
+
97
+ def run_export(
98
+ model_type: str,
99
+ checkpoint: str,
100
+ output: str,
101
+ opset: int,
102
+ return_single_mask: bool,
103
+ gelu_approximate: bool = False,
104
+ use_stability_score: bool = False,
105
+ return_extra_metrics=False,
106
+ ):
107
+ print("Loading model...")
108
+ if model_type == "vit_b":
109
+ sam = build_sam_vit_b(checkpoint)
110
+ elif model_type == "vit_l":
111
+ sam = build_sam_vit_l(checkpoint)
112
+ else:
113
+ sam = build_sam(checkpoint)
114
+
115
+ onnx_model = SamOnnxModel(
116
+ model=sam,
117
+ return_single_mask=return_single_mask,
118
+ use_stability_score=use_stability_score,
119
+ return_extra_metrics=return_extra_metrics,
120
+ )
121
+
122
+ if gelu_approximate:
123
+ for n, m in onnx_model.named_modules():
124
+ if isinstance(m, torch.nn.GELU):
125
+ m.approximate = "tanh"
126
+
127
+ dynamic_axes = {
128
+ "point_coords": {1: "num_points"},
129
+ "point_labels": {1: "num_points"},
130
+ }
131
+
132
+ embed_dim = sam.prompt_encoder.embed_dim
133
+ embed_size = sam.prompt_encoder.image_embedding_size
134
+ mask_input_size = [4 * x for x in embed_size]
135
+ dummy_inputs = {
136
+ "image_embeddings": torch.randn(1, embed_dim, *embed_size, dtype=torch.float),
137
+ "point_coords": torch.randint(low=0, high=1024, size=(1, 5, 2), dtype=torch.float),
138
+ "point_labels": torch.randint(low=0, high=4, size=(1, 5), dtype=torch.float),
139
+ "mask_input": torch.randn(1, 1, *mask_input_size, dtype=torch.float),
140
+ "has_mask_input": torch.tensor([1], dtype=torch.float),
141
+ "orig_im_size": torch.tensor([1500, 2250], dtype=torch.float),
142
+ }
143
+
144
+ _ = onnx_model(**dummy_inputs)
145
+
146
+ output_names = ["masks", "iou_predictions", "low_res_masks"]
147
+
148
+ with warnings.catch_warnings():
149
+ warnings.filterwarnings("ignore", category=torch.jit.TracerWarning)
150
+ warnings.filterwarnings("ignore", category=UserWarning)
151
+ with open(output, "wb") as f:
152
+ print(f"Exporing onnx model to {output}...")
153
+ torch.onnx.export(
154
+ onnx_model,
155
+ tuple(dummy_inputs.values()),
156
+ f,
157
+ export_params=True,
158
+ verbose=False,
159
+ opset_version=opset,
160
+ do_constant_folding=True,
161
+ input_names=list(dummy_inputs.keys()),
162
+ output_names=output_names,
163
+ dynamic_axes=dynamic_axes,
164
+ )
165
+
166
+ if onnxruntime_exists:
167
+ ort_inputs = {k: to_numpy(v) for k, v in dummy_inputs.items()}
168
+ ort_session = onnxruntime.InferenceSession(output)
169
+ _ = ort_session.run(None, ort_inputs)
170
+ print("Model has successfully been run with ONNXRuntime.")
171
+
172
+
173
+ def to_numpy(tensor):
174
+ return tensor.cpu().numpy()
175
+
176
+
177
+ if __name__ == "__main__":
178
+ args = parser.parse_args()
179
+ run_export(
180
+ model_type=args.model_type,
181
+ checkpoint=args.checkpoint,
182
+ output=args.output,
183
+ opset=args.opset,
184
+ return_single_mask=args.return_single_mask,
185
+ gelu_approximate=args.gelu_approximate,
186
+ use_stability_score=args.use_stability_score,
187
+ return_extra_metrics=args.return_extra_metrics,
188
+ )
189
+
190
+ if args.quantize_out is not None:
191
+ assert onnxruntime_exists, "onnxruntime is required to quantize the model."
192
+ from onnxruntime.quantization import QuantType # type: ignore
193
+ from onnxruntime.quantization.quantize import quantize_dynamic # type: ignore
194
+
195
+ print(f"Quantizing model and writing to {args.quantize_out}...")
196
+ quantize_dynamic(
197
+ model_input=args.output,
198
+ model_output=args.quantize_out,
199
+ optimize_model=True,
200
+ per_channel=False,
201
+ reduce_range=False,
202
+ weight_type=QuantType.QUInt8,
203
+ )
204
+ print("Done!")
segment_anything/segment_anything.egg-info/PKG-INFO ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ Metadata-Version: 2.1
2
+ Name: segment-anything
3
+ Version: 1.0
4
+ Provides-Extra: all
5
+ Provides-Extra: dev
6
+ License-File: LICENSE
segment_anything/segment_anything.egg-info/SOURCES.txt ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ LICENSE
2
+ README.md
3
+ setup.cfg
4
+ setup.py
5
+ segment_anything/__init__.py
6
+ segment_anything/automatic_mask_generator.py
7
+ segment_anything/build_sam.py
8
+ segment_anything/build_sam_hq.py
9
+ segment_anything/predictor.py
10
+ segment_anything.egg-info/PKG-INFO
11
+ segment_anything.egg-info/SOURCES.txt
12
+ segment_anything.egg-info/dependency_links.txt
13
+ segment_anything.egg-info/requires.txt
14
+ segment_anything.egg-info/top_level.txt
15
+ segment_anything/mobile_encoder/__init__.py
16
+ segment_anything/mobile_encoder/setup_mobile_sam.py
17
+ segment_anything/mobile_encoder/tiny_vit_sam.py
18
+ segment_anything/modeling/__init__.py
19
+ segment_anything/modeling/common.py
20
+ segment_anything/modeling/image_encoder.py
21
+ segment_anything/modeling/mask_decoder.py
22
+ segment_anything/modeling/mask_decoder_hq.py
23
+ segment_anything/modeling/prompt_encoder.py
24
+ segment_anything/modeling/sam.py
25
+ segment_anything/modeling/transformer.py
26
+ segment_anything/utils/__init__.py
27
+ segment_anything/utils/amg.py
28
+ segment_anything/utils/onnx.py
29
+ segment_anything/utils/transforms.py
segment_anything/segment_anything.egg-info/dependency_links.txt ADDED
@@ -0,0 +1 @@
 
 
1
+
segment_anything/segment_anything.egg-info/requires.txt ADDED
@@ -0,0 +1,13 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+
2
+ [all]
3
+ matplotlib
4
+ pycocotools
5
+ opencv-python
6
+ onnx
7
+ onnxruntime
8
+
9
+ [dev]
10
+ flake8
11
+ isort
12
+ black
13
+ mypy
segment_anything/segment_anything.egg-info/top_level.txt ADDED
@@ -0,0 +1 @@
 
 
1
+ segment_anything
segment_anything/segment_anything/__init__.py ADDED
@@ -0,0 +1,23 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Copyright (c) Meta Platforms, Inc. and affiliates.
2
+ # All rights reserved.
3
+
4
+ # This source code is licensed under the license found in the
5
+ # LICENSE file in the root directory of this source tree.
6
+
7
+ from .build_sam import (
8
+ build_sam,
9
+ build_sam_vit_h,
10
+ build_sam_vit_l,
11
+ build_sam_vit_b,
12
+ sam_model_registry,
13
+ )
14
+ from .build_sam_hq import (
15
+ build_sam_hq,
16
+ build_sam_hq_vit_h,
17
+ build_sam_hq_vit_l,
18
+ build_sam_hq_vit_b,
19
+ sam_hq_model_registry,
20
+ )
21
+ from .predictor import SamPredictor, SamEncoder, SamDecoder, sam_decode, segment
22
+ from .automatic_mask_generator import SamAutomaticMaskGenerator
23
+ from .mobile_encoder.setup_mobile_sam import setup_model, load_mobile_sam
segment_anything/segment_anything/__pycache__/__init__.cpython-38.pyc ADDED
Binary file (744 Bytes). View file
 
segment_anything/segment_anything/__pycache__/automatic_mask_generator.cpython-38.pyc ADDED
Binary file (11.4 kB). View file
 
segment_anything/segment_anything/__pycache__/build_sam.cpython-38.pyc ADDED
Binary file (2.43 kB). View file
 
segment_anything/segment_anything/__pycache__/build_sam_hq.cpython-38.pyc ADDED
Binary file (2.67 kB). View file
 
segment_anything/segment_anything/__pycache__/predictor.cpython-38.pyc ADDED
Binary file (17.2 kB). View file
 
segment_anything/segment_anything/automatic_mask_generator.py ADDED
@@ -0,0 +1,372 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Copyright (c) Meta Platforms, Inc. and affiliates.
2
+ # All rights reserved.
3
+
4
+ # This source code is licensed under the license found in the
5
+ # LICENSE file in the root directory of this source tree.
6
+
7
+ import numpy as np
8
+ import torch
9
+ from torchvision.ops.boxes import batched_nms, box_area # type: ignore
10
+
11
+ from typing import Any, Dict, List, Optional, Tuple
12
+
13
+ from .modeling import Sam
14
+ from .predictor import SamPredictor
15
+ from .utils.amg import (
16
+ MaskData,
17
+ area_from_rle,
18
+ batch_iterator,
19
+ batched_mask_to_box,
20
+ box_xyxy_to_xywh,
21
+ build_all_layer_point_grids,
22
+ calculate_stability_score,
23
+ coco_encode_rle,
24
+ generate_crop_boxes,
25
+ is_box_near_crop_edge,
26
+ mask_to_rle_pytorch,
27
+ remove_small_regions,
28
+ rle_to_mask,
29
+ uncrop_boxes_xyxy,
30
+ uncrop_masks,
31
+ uncrop_points,
32
+ )
33
+
34
+
35
+ class SamAutomaticMaskGenerator:
36
+ def __init__(
37
+ self,
38
+ model: Sam,
39
+ points_per_side: Optional[int] = 32,
40
+ points_per_batch: int = 64,
41
+ pred_iou_thresh: float = 0.88,
42
+ stability_score_thresh: float = 0.95,
43
+ stability_score_offset: float = 1.0,
44
+ box_nms_thresh: float = 0.7,
45
+ crop_n_layers: int = 0,
46
+ crop_nms_thresh: float = 0.7,
47
+ crop_overlap_ratio: float = 512 / 1500,
48
+ crop_n_points_downscale_factor: int = 1,
49
+ point_grids: Optional[List[np.ndarray]] = None,
50
+ min_mask_region_area: int = 0,
51
+ output_mode: str = "binary_mask",
52
+ ) -> None:
53
+ """
54
+ Using a SAM model, generates masks for the entire image.
55
+ Generates a grid of point prompts over the image, then filters
56
+ low quality and duplicate masks. The default settings are chosen
57
+ for SAM with a ViT-H backbone.
58
+
59
+ Arguments:
60
+ model (Sam): The SAM model to use for mask prediction.
61
+ points_per_side (int or None): The number of points to be sampled
62
+ along one side of the image. The total number of points is
63
+ points_per_side**2. If None, 'point_grids' must provide explicit
64
+ point sampling.
65
+ points_per_batch (int): Sets the number of points run simultaneously
66
+ by the model. Higher numbers may be faster but use more GPU memory.
67
+ pred_iou_thresh (float): A filtering threshold in [0,1], using the
68
+ model's predicted mask quality.
69
+ stability_score_thresh (float): A filtering threshold in [0,1], using
70
+ the stability of the mask under changes to the cutoff used to binarize
71
+ the model's mask predictions.
72
+ stability_score_offset (float): The amount to shift the cutoff when
73
+ calculated the stability score.
74
+ box_nms_thresh (float): The box IoU cutoff used by non-maximal
75
+ suppression to filter duplicate masks.
76
+ crops_n_layers (int): If >0, mask prediction will be run again on
77
+ crops of the image. Sets the number of layers to run, where each
78
+ layer has 2**i_layer number of image crops.
79
+ crops_nms_thresh (float): The box IoU cutoff used by non-maximal
80
+ suppression to filter duplicate masks between different crops.
81
+ crop_overlap_ratio (float): Sets the degree to which crops overlap.
82
+ In the first crop layer, crops will overlap by this fraction of
83
+ the image length. Later layers with more crops scale down this overlap.
84
+ crop_n_points_downscale_factor (int): The number of points-per-side
85
+ sampled in layer n is scaled down by crop_n_points_downscale_factor**n.
86
+ point_grids (list(np.ndarray) or None): A list over explicit grids
87
+ of points used for sampling, normalized to [0,1]. The nth grid in the
88
+ list is used in the nth crop layer. Exclusive with points_per_side.
89
+ min_mask_region_area (int): If >0, postprocessing will be applied
90
+ to remove disconnected regions and holes in masks with area smaller
91
+ than min_mask_region_area. Requires opencv.
92
+ output_mode (str): The form masks are returned in. Can be 'binary_mask',
93
+ 'uncompressed_rle', or 'coco_rle'. 'coco_rle' requires pycocotools.
94
+ For large resolutions, 'binary_mask' may consume large amounts of
95
+ memory.
96
+ """
97
+
98
+ assert (points_per_side is None) != (
99
+ point_grids is None
100
+ ), "Exactly one of points_per_side or point_grid must be provided."
101
+ if points_per_side is not None:
102
+ self.point_grids = build_all_layer_point_grids(
103
+ points_per_side,
104
+ crop_n_layers,
105
+ crop_n_points_downscale_factor,
106
+ )
107
+ elif point_grids is not None:
108
+ self.point_grids = point_grids
109
+ else:
110
+ raise ValueError("Can't have both points_per_side and point_grid be None.")
111
+
112
+ assert output_mode in [
113
+ "binary_mask",
114
+ "uncompressed_rle",
115
+ "coco_rle",
116
+ ], f"Unknown output_mode {output_mode}."
117
+ if output_mode == "coco_rle":
118
+ from pycocotools import mask as mask_utils # type: ignore # noqa: F401
119
+
120
+ if min_mask_region_area > 0:
121
+ import cv2 # type: ignore # noqa: F401
122
+
123
+ self.predictor = SamPredictor(model)
124
+ self.points_per_batch = points_per_batch
125
+ self.pred_iou_thresh = pred_iou_thresh
126
+ self.stability_score_thresh = stability_score_thresh
127
+ self.stability_score_offset = stability_score_offset
128
+ self.box_nms_thresh = box_nms_thresh
129
+ self.crop_n_layers = crop_n_layers
130
+ self.crop_nms_thresh = crop_nms_thresh
131
+ self.crop_overlap_ratio = crop_overlap_ratio
132
+ self.crop_n_points_downscale_factor = crop_n_points_downscale_factor
133
+ self.min_mask_region_area = min_mask_region_area
134
+ self.output_mode = output_mode
135
+
136
+ @torch.no_grad()
137
+ def generate(self, image: np.ndarray) -> List[Dict[str, Any]]:
138
+ """
139
+ Generates masks for the given image.
140
+
141
+ Arguments:
142
+ image (np.ndarray): The image to generate masks for, in HWC uint8 format.
143
+
144
+ Returns:
145
+ list(dict(str, any)): A list over records for masks. Each record is
146
+ a dict containing the following keys:
147
+ segmentation (dict(str, any) or np.ndarray): The mask. If
148
+ output_mode='binary_mask', is an array of shape HW. Otherwise,
149
+ is a dictionary containing the RLE.
150
+ bbox (list(float)): The box around the mask, in XYWH format.
151
+ area (int): The area in pixels of the mask.
152
+ predicted_iou (float): The model's own prediction of the mask's
153
+ quality. This is filtered by the pred_iou_thresh parameter.
154
+ point_coords (list(list(float))): The point coordinates input
155
+ to the model to generate this mask.
156
+ stability_score (float): A measure of the mask's quality. This
157
+ is filtered on using the stability_score_thresh parameter.
158
+ crop_box (list(float)): The crop of the image used to generate
159
+ the mask, given in XYWH format.
160
+ """
161
+
162
+ # Generate masks
163
+ mask_data = self._generate_masks(image)
164
+
165
+ # Filter small disconnected regions and holes in masks
166
+ if self.min_mask_region_area > 0:
167
+ mask_data = self.postprocess_small_regions(
168
+ mask_data,
169
+ self.min_mask_region_area,
170
+ max(self.box_nms_thresh, self.crop_nms_thresh),
171
+ )
172
+
173
+ # Encode masks
174
+ if self.output_mode == "coco_rle":
175
+ mask_data["segmentations"] = [coco_encode_rle(rle) for rle in mask_data["rles"]]
176
+ elif self.output_mode == "binary_mask":
177
+ mask_data["segmentations"] = [rle_to_mask(rle) for rle in mask_data["rles"]]
178
+ else:
179
+ mask_data["segmentations"] = mask_data["rles"]
180
+
181
+ # Write mask records
182
+ curr_anns = []
183
+ for idx in range(len(mask_data["segmentations"])):
184
+ ann = {
185
+ "segmentation": mask_data["segmentations"][idx],
186
+ "area": area_from_rle(mask_data["rles"][idx]),
187
+ "bbox": box_xyxy_to_xywh(mask_data["boxes"][idx]).tolist(),
188
+ "predicted_iou": mask_data["iou_preds"][idx].item(),
189
+ "point_coords": [mask_data["points"][idx].tolist()],
190
+ "stability_score": mask_data["stability_score"][idx].item(),
191
+ "crop_box": box_xyxy_to_xywh(mask_data["crop_boxes"][idx]).tolist(),
192
+ }
193
+ curr_anns.append(ann)
194
+
195
+ return curr_anns
196
+
197
+ def _generate_masks(self, image: np.ndarray) -> MaskData:
198
+ orig_size = image.shape[:2]
199
+ crop_boxes, layer_idxs = generate_crop_boxes(
200
+ orig_size, self.crop_n_layers, self.crop_overlap_ratio
201
+ )
202
+
203
+ # Iterate over image crops
204
+ data = MaskData()
205
+ for crop_box, layer_idx in zip(crop_boxes, layer_idxs):
206
+ crop_data = self._process_crop(image, crop_box, layer_idx, orig_size)
207
+ data.cat(crop_data)
208
+
209
+ # Remove duplicate masks between crops
210
+ if len(crop_boxes) > 1:
211
+ # Prefer masks from smaller crops
212
+ scores = 1 / box_area(data["crop_boxes"])
213
+ scores = scores.to(data["boxes"].device)
214
+ keep_by_nms = batched_nms(
215
+ data["boxes"].float(),
216
+ scores,
217
+ torch.zeros(len(data["boxes"])), # categories
218
+ iou_threshold=self.crop_nms_thresh,
219
+ )
220
+ data.filter(keep_by_nms)
221
+
222
+ data.to_numpy()
223
+ return data
224
+
225
+ def _process_crop(
226
+ self,
227
+ image: np.ndarray,
228
+ crop_box: List[int],
229
+ crop_layer_idx: int,
230
+ orig_size: Tuple[int, ...],
231
+ ) -> MaskData:
232
+ # Crop the image and calculate embeddings
233
+ x0, y0, x1, y1 = crop_box
234
+ cropped_im = image[y0:y1, x0:x1, :]
235
+ cropped_im_size = cropped_im.shape[:2]
236
+ self.predictor.set_image(cropped_im)
237
+
238
+ # Get points for this crop
239
+ points_scale = np.array(cropped_im_size)[None, ::-1]
240
+ points_for_image = self.point_grids[crop_layer_idx] * points_scale
241
+
242
+ # Generate masks for this crop in batches
243
+ data = MaskData()
244
+ for (points,) in batch_iterator(self.points_per_batch, points_for_image):
245
+ batch_data = self._process_batch(points, cropped_im_size, crop_box, orig_size)
246
+ data.cat(batch_data)
247
+ del batch_data
248
+ self.predictor.reset_image()
249
+
250
+ # Remove duplicates within this crop.
251
+ keep_by_nms = batched_nms(
252
+ data["boxes"].float(),
253
+ data["iou_preds"],
254
+ torch.zeros(len(data["boxes"])), # categories
255
+ iou_threshold=self.box_nms_thresh,
256
+ )
257
+ data.filter(keep_by_nms)
258
+
259
+ # Return to the original image frame
260
+ data["boxes"] = uncrop_boxes_xyxy(data["boxes"], crop_box)
261
+ data["points"] = uncrop_points(data["points"], crop_box)
262
+ data["crop_boxes"] = torch.tensor([crop_box for _ in range(len(data["rles"]))])
263
+
264
+ return data
265
+
266
+ def _process_batch(
267
+ self,
268
+ points: np.ndarray,
269
+ im_size: Tuple[int, ...],
270
+ crop_box: List[int],
271
+ orig_size: Tuple[int, ...],
272
+ ) -> MaskData:
273
+ orig_h, orig_w = orig_size
274
+
275
+ # Run model on this batch
276
+ transformed_points = self.predictor.transform.apply_coords(points, im_size)
277
+ in_points = torch.as_tensor(transformed_points, device=self.predictor.device)
278
+ in_labels = torch.ones(in_points.shape[0], dtype=torch.int, device=in_points.device)
279
+ masks, iou_preds, _ = self.predictor.predict_torch(
280
+ in_points[:, None, :],
281
+ in_labels[:, None],
282
+ multimask_output=True,
283
+ return_logits=True,
284
+ )
285
+
286
+ # Serialize predictions and store in MaskData
287
+ data = MaskData(
288
+ masks=masks.flatten(0, 1),
289
+ iou_preds=iou_preds.flatten(0, 1),
290
+ points=torch.as_tensor(points.repeat(masks.shape[1], axis=0)),
291
+ )
292
+ del masks
293
+
294
+ # Filter by predicted IoU
295
+ if self.pred_iou_thresh > 0.0:
296
+ keep_mask = data["iou_preds"] > self.pred_iou_thresh
297
+ data.filter(keep_mask)
298
+
299
+ # Calculate stability score
300
+ data["stability_score"] = calculate_stability_score(
301
+ data["masks"], self.predictor.model.mask_threshold, self.stability_score_offset
302
+ )
303
+ if self.stability_score_thresh > 0.0:
304
+ keep_mask = data["stability_score"] >= self.stability_score_thresh
305
+ data.filter(keep_mask)
306
+
307
+ # Threshold masks and calculate boxes
308
+ data["masks"] = data["masks"] > self.predictor.model.mask_threshold
309
+ data["boxes"] = batched_mask_to_box(data["masks"])
310
+
311
+ # Filter boxes that touch crop boundaries
312
+ keep_mask = ~is_box_near_crop_edge(data["boxes"], crop_box, [0, 0, orig_w, orig_h])
313
+ if not torch.all(keep_mask):
314
+ data.filter(keep_mask)
315
+
316
+ # Compress to RLE
317
+ data["masks"] = uncrop_masks(data["masks"], crop_box, orig_h, orig_w)
318
+ data["rles"] = mask_to_rle_pytorch(data["masks"])
319
+ del data["masks"]
320
+
321
+ return data
322
+
323
+ @staticmethod
324
+ def postprocess_small_regions(
325
+ mask_data: MaskData, min_area: int, nms_thresh: float
326
+ ) -> MaskData:
327
+ """
328
+ Removes small disconnected regions and holes in masks, then reruns
329
+ box NMS to remove any new duplicates.
330
+
331
+ Edits mask_data in place.
332
+
333
+ Requires open-cv as a dependency.
334
+ """
335
+ if len(mask_data["rles"]) == 0:
336
+ return mask_data
337
+
338
+ # Filter small disconnected regions and holes
339
+ new_masks = []
340
+ scores = []
341
+ for rle in mask_data["rles"]:
342
+ mask = rle_to_mask(rle)
343
+
344
+ mask, changed = remove_small_regions(mask, min_area, mode="holes")
345
+ unchanged = not changed
346
+ mask, changed = remove_small_regions(mask, min_area, mode="islands")
347
+ unchanged = unchanged and not changed
348
+
349
+ new_masks.append(torch.as_tensor(mask).unsqueeze(0))
350
+ # Give score=0 to changed masks and score=1 to unchanged masks
351
+ # so NMS will prefer ones that didn't need postprocessing
352
+ scores.append(float(unchanged))
353
+
354
+ # Recalculate boxes and remove any new duplicates
355
+ masks = torch.cat(new_masks, dim=0)
356
+ boxes = batched_mask_to_box(masks)
357
+ keep_by_nms = batched_nms(
358
+ boxes.float(),
359
+ torch.as_tensor(scores),
360
+ torch.zeros(len(boxes)), # categories
361
+ iou_threshold=nms_thresh,
362
+ )
363
+
364
+ # Only recalculate RLEs for masks that have changed
365
+ for i_mask in keep_by_nms:
366
+ if scores[i_mask] == 0.0:
367
+ mask_torch = masks[i_mask].unsqueeze(0)
368
+ mask_data["rles"][i_mask] = mask_to_rle_pytorch(mask_torch)[0]
369
+ mask_data["boxes"][i_mask] = boxes[i_mask] # update res directly
370
+ mask_data.filter(keep_by_nms)
371
+
372
+ return mask_data
segment_anything/segment_anything/build_sam.py ADDED
@@ -0,0 +1,111 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Copyright (c) Meta Platforms, Inc. and affiliates.
2
+ # All rights reserved.
3
+
4
+ # This source code is licensed under the license found in the
5
+ # LICENSE file in the root directory of this source tree.
6
+
7
+ import torch
8
+
9
+ from functools import partial
10
+
11
+ from .modeling import ImageEncoderViT, MaskDecoder, PromptEncoder, Sam, TwoWayTransformer
12
+
13
+ def build_sam(checkpoint=None):
14
+ sam_version = checkpoint.split('.')[0].split('_')[2]
15
+ if sam_version == 'b':
16
+ return build_sam_vit_b(checkpoint)
17
+ elif sam_version == 'l':
18
+ return build_sam_vit_l(checkpoint)
19
+ else:
20
+ return build_sam_vit_h(checkpoint)
21
+
22
+ def build_sam_vit_h(checkpoint=None):
23
+ return _build_sam(
24
+ encoder_embed_dim=1280,
25
+ encoder_depth=32,
26
+ encoder_num_heads=16,
27
+ encoder_global_attn_indexes=[7, 15, 23, 31],
28
+ checkpoint=checkpoint,
29
+ )
30
+
31
+ def build_sam_vit_l(checkpoint=None):
32
+ return _build_sam(
33
+ encoder_embed_dim=1024,
34
+ encoder_depth=24,
35
+ encoder_num_heads=16,
36
+ encoder_global_attn_indexes=[5, 11, 17, 23],
37
+ checkpoint=checkpoint,
38
+ )
39
+
40
+
41
+ def build_sam_vit_b(checkpoint=None):
42
+ return _build_sam(
43
+ encoder_embed_dim=768,
44
+ encoder_depth=12,
45
+ encoder_num_heads=12,
46
+ encoder_global_attn_indexes=[2, 5, 8, 11],
47
+ checkpoint=checkpoint,
48
+ )
49
+
50
+
51
+ sam_model_registry = {
52
+ "default": build_sam,
53
+ "vit_h": build_sam,
54
+ "vit_l": build_sam_vit_l,
55
+ "vit_b": build_sam_vit_b,
56
+ }
57
+
58
+
59
+ def _build_sam(
60
+ encoder_embed_dim,
61
+ encoder_depth,
62
+ encoder_num_heads,
63
+ encoder_global_attn_indexes,
64
+ checkpoint=None,
65
+ ):
66
+ prompt_embed_dim = 256
67
+ image_size = 1024
68
+ vit_patch_size = 16
69
+ image_embedding_size = image_size // vit_patch_size
70
+ sam = Sam(
71
+ image_encoder=ImageEncoderViT(
72
+ depth=encoder_depth,
73
+ embed_dim=encoder_embed_dim,
74
+ img_size=image_size,
75
+ mlp_ratio=4,
76
+ norm_layer=partial(torch.nn.LayerNorm, eps=1e-6),
77
+ num_heads=encoder_num_heads,
78
+ patch_size=vit_patch_size,
79
+ qkv_bias=True,
80
+ use_rel_pos=True,
81
+ global_attn_indexes=encoder_global_attn_indexes,
82
+ window_size=14,
83
+ out_chans=prompt_embed_dim,
84
+ ),
85
+ prompt_encoder=PromptEncoder(
86
+ embed_dim=prompt_embed_dim,
87
+ image_embedding_size=(image_embedding_size, image_embedding_size),
88
+ input_image_size=(image_size, image_size),
89
+ mask_in_chans=16,
90
+ ),
91
+ mask_decoder=MaskDecoder(
92
+ num_multimask_outputs=3,
93
+ transformer=TwoWayTransformer(
94
+ depth=2,
95
+ embedding_dim=prompt_embed_dim,
96
+ mlp_dim=2048,
97
+ num_heads=8,
98
+ ),
99
+ transformer_dim=prompt_embed_dim,
100
+ iou_head_depth=3,
101
+ iou_head_hidden_dim=256,
102
+ ),
103
+ pixel_mean=[123.675, 116.28, 103.53],
104
+ pixel_std=[58.395, 57.12, 57.375],
105
+ )
106
+ sam.eval()
107
+ if checkpoint is not None:
108
+ with open(checkpoint, "rb") as f:
109
+ state_dict = torch.load(f)
110
+ sam.load_state_dict(state_dict)
111
+ return sam
segment_anything/segment_anything/build_sam_hq.py ADDED
@@ -0,0 +1,117 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Copyright (c) Meta Platforms, Inc. and affiliates.
2
+ # All rights reserved.
3
+
4
+ # This source code is licensed under the license found in the
5
+ # LICENSE file in the root directory of this source tree.
6
+
7
+ import torch
8
+
9
+ from functools import partial
10
+
11
+ from .modeling import ImageEncoderViT, MaskDecoderHQ, PromptEncoder, Sam, TwoWayTransformer
12
+
13
+ def build_sam_hq(checkpoint=None):
14
+ sam_version = checkpoint.split('.')[0].split('_')[-1]
15
+ if sam_version == 'b':
16
+ return build_sam_hq_vit_b(checkpoint)
17
+ elif sam_version == 'l':
18
+ return build_sam_hq_vit_l(checkpoint)
19
+ else:
20
+ return build_sam_hq_vit_h(checkpoint)
21
+
22
+ def build_sam_hq_vit_h(checkpoint=None):
23
+ return _build_sam(
24
+ encoder_embed_dim=1280,
25
+ encoder_depth=32,
26
+ encoder_num_heads=16,
27
+ encoder_global_attn_indexes=[7, 15, 23, 31],
28
+ checkpoint=checkpoint,
29
+ )
30
+
31
+ def build_sam_hq_vit_l(checkpoint=None):
32
+ return _build_sam(
33
+ encoder_embed_dim=1024,
34
+ encoder_depth=24,
35
+ encoder_num_heads=16,
36
+ encoder_global_attn_indexes=[5, 11, 17, 23],
37
+ checkpoint=checkpoint,
38
+ )
39
+
40
+
41
+ def build_sam_hq_vit_b(checkpoint=None):
42
+ return _build_sam(
43
+ encoder_embed_dim=768,
44
+ encoder_depth=12,
45
+ encoder_num_heads=12,
46
+ encoder_global_attn_indexes=[2, 5, 8, 11],
47
+ checkpoint=checkpoint,
48
+ )
49
+
50
+
51
+ sam_hq_model_registry = {
52
+ "default": build_sam_hq_vit_h,
53
+ "vit_h": build_sam_hq_vit_h,
54
+ "vit_l": build_sam_hq_vit_l,
55
+ "vit_b": build_sam_hq_vit_b,
56
+ }
57
+
58
+
59
+ def _build_sam(
60
+ encoder_embed_dim,
61
+ encoder_depth,
62
+ encoder_num_heads,
63
+ encoder_global_attn_indexes,
64
+ checkpoint=None,
65
+ ):
66
+ prompt_embed_dim = 256
67
+ image_size = 1024
68
+ vit_patch_size = 16
69
+ image_embedding_size = image_size // vit_patch_size
70
+ sam = Sam(
71
+ image_encoder=ImageEncoderViT(
72
+ depth=encoder_depth,
73
+ embed_dim=encoder_embed_dim,
74
+ img_size=image_size,
75
+ mlp_ratio=4,
76
+ norm_layer=partial(torch.nn.LayerNorm, eps=1e-6),
77
+ num_heads=encoder_num_heads,
78
+ patch_size=vit_patch_size,
79
+ qkv_bias=True,
80
+ use_rel_pos=True,
81
+ global_attn_indexes=encoder_global_attn_indexes,
82
+ window_size=14,
83
+ out_chans=prompt_embed_dim,
84
+ ),
85
+ prompt_encoder=PromptEncoder(
86
+ embed_dim=prompt_embed_dim,
87
+ image_embedding_size=(image_embedding_size, image_embedding_size),
88
+ input_image_size=(image_size, image_size),
89
+ mask_in_chans=16,
90
+ ),
91
+ mask_decoder=MaskDecoderHQ(
92
+ num_multimask_outputs=3,
93
+ transformer=TwoWayTransformer(
94
+ depth=2,
95
+ embedding_dim=prompt_embed_dim,
96
+ mlp_dim=2048,
97
+ num_heads=8,
98
+ ),
99
+ transformer_dim=prompt_embed_dim,
100
+ iou_head_depth=3,
101
+ iou_head_hidden_dim=256,
102
+ vit_dim=encoder_embed_dim,
103
+ ),
104
+ pixel_mean=[123.675, 116.28, 103.53],
105
+ pixel_std=[58.395, 57.12, 57.375],
106
+ )
107
+ # sam.eval()
108
+ if checkpoint is not None:
109
+ with open(checkpoint, "rb") as f:
110
+ state_dict = torch.load(f)
111
+ info = sam.load_state_dict(state_dict, strict=False)
112
+ print(info)
113
+ for n, p in sam.named_parameters():
114
+ if 'hf_token' not in n and 'hf_mlp' not in n and 'compress_vit_feat' not in n and 'embedding_encoder' not in n and 'embedding_maskfeature' not in n:
115
+ p.requires_grad = False
116
+
117
+ return sam
segment_anything/segment_anything/mobile_encoder/__init__.py ADDED
File without changes
segment_anything/segment_anything/mobile_encoder/__pycache__/__init__.cpython-38.pyc ADDED
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segment_anything/segment_anything/mobile_encoder/__pycache__/setup_mobile_sam.cpython-38.pyc ADDED
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segment_anything/segment_anything/mobile_encoder/setup_mobile_sam.py ADDED
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1
+ import torch
2
+ from segment_anything.mobile_encoder.tiny_vit_sam import TinyViT
3
+ from segment_anything.modeling import ImageEncoderViT, MaskDecoder, PromptEncoder, Sam, TwoWayTransformer
4
+ def setup_model():
5
+ prompt_embed_dim = 256
6
+ image_size = 1024
7
+ vit_patch_size = 16
8
+ image_embedding_size = image_size // vit_patch_size
9
+ mobile_sam = Sam(
10
+ image_encoder=TinyViT(img_size=1024, in_chans=3, num_classes=1000,
11
+ embed_dims=[64, 128, 160, 320],
12
+ depths=[2, 2, 6, 2],
13
+ num_heads=[2, 4, 5, 10],
14
+ window_sizes=[7, 7, 14, 7],
15
+ mlp_ratio=4.,
16
+ drop_rate=0.,
17
+ drop_path_rate=0.0,
18
+ use_checkpoint=False,
19
+ mbconv_expand_ratio=4.0,
20
+ local_conv_size=3,
21
+ layer_lr_decay=0.8
22
+ ),
23
+ prompt_encoder=PromptEncoder(
24
+ embed_dim=prompt_embed_dim,
25
+ image_embedding_size=(image_embedding_size, image_embedding_size),
26
+ input_image_size=(image_size, image_size),
27
+ mask_in_chans=16,
28
+ ),
29
+ mask_decoder=MaskDecoder(
30
+ num_multimask_outputs=3,
31
+ transformer=TwoWayTransformer(
32
+ depth=2,
33
+ embedding_dim=prompt_embed_dim,
34
+ mlp_dim=2048,
35
+ num_heads=8,
36
+ ),
37
+ transformer_dim=prompt_embed_dim,
38
+ iou_head_depth=3,
39
+ iou_head_hidden_dim=256,
40
+ ),
41
+ pixel_mean=[123.675, 116.28, 103.53],
42
+ pixel_std=[58.395, 57.12, 57.375],
43
+ )
44
+ return mobile_sam
45
+ def load_mobile_sam(mobile_sam_checkpoint_path,
46
+ device='cuda'):
47
+ checkpoint = torch.load(mobile_sam_checkpoint_path)
48
+ mobile_sam = setup_model()
49
+ mobile_sam.load_state_dict(checkpoint, strict=True)
50
+ mobile_sam.to(device=device)
51
+ return mobile_sam
segment_anything/segment_anything/mobile_encoder/tiny_vit_sam.py ADDED
@@ -0,0 +1,716 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # --------------------------------------------------------
2
+ # TinyViT Model Architecture
3
+ # Copyright (c) 2022 Microsoft
4
+ # Adapted from LeViT and Swin Transformer
5
+ # LeViT: (https://github.com/facebookresearch/levit)
6
+ # Swin: (https://github.com/microsoft/swin-transformer)
7
+ # Build the TinyViT Model
8
+ # --------------------------------------------------------
9
+
10
+ import itertools
11
+ import torch
12
+ import torch.nn as nn
13
+ import torch.nn.functional as F
14
+ import torch.utils.checkpoint as checkpoint
15
+ from timm.models.layers import DropPath as TimmDropPath,\
16
+ to_2tuple, trunc_normal_
17
+ from timm.models.registry import register_model
18
+ from typing import Tuple
19
+
20
+
21
+ class Conv2d_BN(torch.nn.Sequential):
22
+ def __init__(self, a, b, ks=1, stride=1, pad=0, dilation=1,
23
+ groups=1, bn_weight_init=1):
24
+ super().__init__()
25
+ self.add_module('c', torch.nn.Conv2d(
26
+ a, b, ks, stride, pad, dilation, groups, bias=False))
27
+ bn = torch.nn.BatchNorm2d(b)
28
+ torch.nn.init.constant_(bn.weight, bn_weight_init)
29
+ torch.nn.init.constant_(bn.bias, 0)
30
+ self.add_module('bn', bn)
31
+
32
+ @torch.no_grad()
33
+ def fuse(self):
34
+ c, bn = self._modules.values()
35
+ w = bn.weight / (bn.running_var + bn.eps)**0.5
36
+ w = c.weight * w[:, None, None, None]
37
+ b = bn.bias - bn.running_mean * bn.weight / \
38
+ (bn.running_var + bn.eps)**0.5
39
+ m = torch.nn.Conv2d(w.size(1) * self.c.groups, w.size(
40
+ 0), w.shape[2:], stride=self.c.stride, padding=self.c.padding, dilation=self.c.dilation, groups=self.c.groups)
41
+ m.weight.data.copy_(w)
42
+ m.bias.data.copy_(b)
43
+ return m
44
+
45
+
46
+ class DropPath(TimmDropPath):
47
+ def __init__(self, drop_prob=None):
48
+ super().__init__(drop_prob=drop_prob)
49
+ self.drop_prob = drop_prob
50
+
51
+ def __repr__(self):
52
+ msg = super().__repr__()
53
+ msg += f'(drop_prob={self.drop_prob})'
54
+ return msg
55
+
56
+
57
+ class PatchEmbed(nn.Module):
58
+ def __init__(self, in_chans, embed_dim, resolution, activation):
59
+ super().__init__()
60
+ img_size: Tuple[int, int] = to_2tuple(resolution)
61
+ self.patches_resolution = (img_size[0] // 4, img_size[1] // 4)
62
+ self.num_patches = self.patches_resolution[0] * \
63
+ self.patches_resolution[1]
64
+ self.in_chans = in_chans
65
+ self.embed_dim = embed_dim
66
+ n = embed_dim
67
+ self.seq = nn.Sequential(
68
+ Conv2d_BN(in_chans, n // 2, 3, 2, 1),
69
+ activation(),
70
+ Conv2d_BN(n // 2, n, 3, 2, 1),
71
+ )
72
+
73
+ def forward(self, x):
74
+ return self.seq(x)
75
+
76
+
77
+ class MBConv(nn.Module):
78
+ def __init__(self, in_chans, out_chans, expand_ratio,
79
+ activation, drop_path):
80
+ super().__init__()
81
+ self.in_chans = in_chans
82
+ self.hidden_chans = int(in_chans * expand_ratio)
83
+ self.out_chans = out_chans
84
+
85
+ self.conv1 = Conv2d_BN(in_chans, self.hidden_chans, ks=1)
86
+ self.act1 = activation()
87
+
88
+ self.conv2 = Conv2d_BN(self.hidden_chans, self.hidden_chans,
89
+ ks=3, stride=1, pad=1, groups=self.hidden_chans)
90
+ self.act2 = activation()
91
+
92
+ self.conv3 = Conv2d_BN(
93
+ self.hidden_chans, out_chans, ks=1, bn_weight_init=0.0)
94
+ self.act3 = activation()
95
+
96
+ self.drop_path = DropPath(
97
+ drop_path) if drop_path > 0. else nn.Identity()
98
+
99
+ def forward(self, x):
100
+ shortcut = x
101
+
102
+ x = self.conv1(x)
103
+ x = self.act1(x)
104
+
105
+ x = self.conv2(x)
106
+ x = self.act2(x)
107
+
108
+ x = self.conv3(x)
109
+
110
+ x = self.drop_path(x)
111
+
112
+ x += shortcut
113
+ x = self.act3(x)
114
+
115
+ return x
116
+
117
+
118
+ class PatchMerging(nn.Module):
119
+ def __init__(self, input_resolution, dim, out_dim, activation):
120
+ super().__init__()
121
+
122
+ self.input_resolution = input_resolution
123
+ self.dim = dim
124
+ self.out_dim = out_dim
125
+ self.act = activation()
126
+ self.conv1 = Conv2d_BN(dim, out_dim, 1, 1, 0)
127
+ stride_c=2
128
+ if(out_dim==320 or out_dim==448 or out_dim==576):#handongshen 576
129
+ stride_c=1
130
+ self.conv2 = Conv2d_BN(out_dim, out_dim, 3, stride_c, 1, groups=out_dim)
131
+ self.conv3 = Conv2d_BN(out_dim, out_dim, 1, 1, 0)
132
+
133
+ def forward(self, x):
134
+ if x.ndim == 3:
135
+ H, W = self.input_resolution
136
+ B = len(x)
137
+ # (B, C, H, W)
138
+ x = x.view(B, H, W, -1).permute(0, 3, 1, 2)
139
+
140
+ x = self.conv1(x)
141
+ x = self.act(x)
142
+
143
+ x = self.conv2(x)
144
+ x = self.act(x)
145
+ x = self.conv3(x)
146
+ x = x.flatten(2).transpose(1, 2)
147
+ return x
148
+
149
+
150
+ class ConvLayer(nn.Module):
151
+ def __init__(self, dim, input_resolution, depth,
152
+ activation,
153
+ drop_path=0., downsample=None, use_checkpoint=False,
154
+ out_dim=None,
155
+ conv_expand_ratio=4.,
156
+ ):
157
+
158
+ super().__init__()
159
+ self.dim = dim
160
+ self.input_resolution = input_resolution
161
+ self.depth = depth
162
+ self.use_checkpoint = use_checkpoint
163
+
164
+ # build blocks
165
+ self.blocks = nn.ModuleList([
166
+ MBConv(dim, dim, conv_expand_ratio, activation,
167
+ drop_path[i] if isinstance(drop_path, list) else drop_path,
168
+ )
169
+ for i in range(depth)])
170
+
171
+ # patch merging layer
172
+ if downsample is not None:
173
+ self.downsample = downsample(
174
+ input_resolution, dim=dim, out_dim=out_dim, activation=activation)
175
+ else:
176
+ self.downsample = None
177
+
178
+ def forward(self, x):
179
+ for blk in self.blocks:
180
+ if self.use_checkpoint:
181
+ x = checkpoint.checkpoint(blk, x)
182
+ else:
183
+ x = blk(x)
184
+ if self.downsample is not None:
185
+ x = self.downsample(x)
186
+ return x
187
+
188
+
189
+ class Mlp(nn.Module):
190
+ def __init__(self, in_features, hidden_features=None,
191
+ out_features=None, act_layer=nn.GELU, drop=0.):
192
+ super().__init__()
193
+ out_features = out_features or in_features
194
+ hidden_features = hidden_features or in_features
195
+ self.norm = nn.LayerNorm(in_features)
196
+ self.fc1 = nn.Linear(in_features, hidden_features)
197
+ self.fc2 = nn.Linear(hidden_features, out_features)
198
+ self.act = act_layer()
199
+ self.drop = nn.Dropout(drop)
200
+
201
+ def forward(self, x):
202
+ x = self.norm(x)
203
+
204
+ x = self.fc1(x)
205
+ x = self.act(x)
206
+ x = self.drop(x)
207
+ x = self.fc2(x)
208
+ x = self.drop(x)
209
+ return x
210
+
211
+
212
+ class Attention(torch.nn.Module):
213
+ def __init__(self, dim, key_dim, num_heads=8,
214
+ attn_ratio=4,
215
+ resolution=(14, 14),
216
+ ):
217
+ super().__init__()
218
+ # (h, w)
219
+ assert isinstance(resolution, tuple) and len(resolution) == 2
220
+ self.num_heads = num_heads
221
+ self.scale = key_dim ** -0.5
222
+ self.key_dim = key_dim
223
+ self.nh_kd = nh_kd = key_dim * num_heads
224
+ self.d = int(attn_ratio * key_dim)
225
+ self.dh = int(attn_ratio * key_dim) * num_heads
226
+ self.attn_ratio = attn_ratio
227
+ h = self.dh + nh_kd * 2
228
+
229
+ self.norm = nn.LayerNorm(dim)
230
+ self.qkv = nn.Linear(dim, h)
231
+ self.proj = nn.Linear(self.dh, dim)
232
+
233
+ points = list(itertools.product(
234
+ range(resolution[0]), range(resolution[1])))
235
+ N = len(points)
236
+ attention_offsets = {}
237
+ idxs = []
238
+ for p1 in points:
239
+ for p2 in points:
240
+ offset = (abs(p1[0] - p2[0]), abs(p1[1] - p2[1]))
241
+ if offset not in attention_offsets:
242
+ attention_offsets[offset] = len(attention_offsets)
243
+ idxs.append(attention_offsets[offset])
244
+ self.attention_biases = torch.nn.Parameter(
245
+ torch.zeros(num_heads, len(attention_offsets)))
246
+ self.register_buffer('attention_bias_idxs',
247
+ torch.LongTensor(idxs).view(N, N),
248
+ persistent=False)
249
+
250
+ @torch.no_grad()
251
+ def train(self, mode=True):
252
+ super().train(mode)
253
+ if mode and hasattr(self, 'ab'):
254
+ del self.ab
255
+ else:
256
+ self.ab = self.attention_biases[:, self.attention_bias_idxs]
257
+
258
+ def forward(self, x): # x (B,N,C)
259
+ B, N, _ = x.shape
260
+
261
+ # Normalization
262
+ x = self.norm(x)
263
+
264
+ qkv = self.qkv(x)
265
+ # (B, N, num_heads, d)
266
+ q, k, v = qkv.view(B, N, self.num_heads, -
267
+ 1).split([self.key_dim, self.key_dim, self.d], dim=3)
268
+ # (B, num_heads, N, d)
269
+ q = q.permute(0, 2, 1, 3)
270
+ k = k.permute(0, 2, 1, 3)
271
+ v = v.permute(0, 2, 1, 3)
272
+
273
+ attn = (
274
+ (q @ k.transpose(-2, -1)) * self.scale
275
+ +
276
+ (self.attention_biases[:, self.attention_bias_idxs]
277
+ if self.training else self.ab)
278
+ )
279
+ attn = attn.softmax(dim=-1)
280
+ x = (attn @ v).transpose(1, 2).reshape(B, N, self.dh)
281
+ x = self.proj(x)
282
+ return x
283
+
284
+
285
+ class TinyViTBlock(nn.Module):
286
+ r""" TinyViT Block.
287
+
288
+ Args:
289
+ dim (int): Number of input channels.
290
+ input_resolution (tuple[int, int]): Input resulotion.
291
+ num_heads (int): Number of attention heads.
292
+ window_size (int): Window size.
293
+ mlp_ratio (float): Ratio of mlp hidden dim to embedding dim.
294
+ drop (float, optional): Dropout rate. Default: 0.0
295
+ drop_path (float, optional): Stochastic depth rate. Default: 0.0
296
+ local_conv_size (int): the kernel size of the convolution between
297
+ Attention and MLP. Default: 3
298
+ activation: the activation function. Default: nn.GELU
299
+ """
300
+
301
+ def __init__(self, dim, input_resolution, num_heads, window_size=7,
302
+ mlp_ratio=4., drop=0., drop_path=0.,
303
+ local_conv_size=3,
304
+ activation=nn.GELU,
305
+ ):
306
+ super().__init__()
307
+ self.dim = dim
308
+ self.input_resolution = input_resolution
309
+ self.num_heads = num_heads
310
+ assert window_size > 0, 'window_size must be greater than 0'
311
+ self.window_size = window_size
312
+ self.mlp_ratio = mlp_ratio
313
+
314
+ self.drop_path = DropPath(
315
+ drop_path) if drop_path > 0. else nn.Identity()
316
+
317
+ assert dim % num_heads == 0, 'dim must be divisible by num_heads'
318
+ head_dim = dim // num_heads
319
+
320
+ window_resolution = (window_size, window_size)
321
+ self.attn = Attention(dim, head_dim, num_heads,
322
+ attn_ratio=1, resolution=window_resolution)
323
+
324
+ mlp_hidden_dim = int(dim * mlp_ratio)
325
+ mlp_activation = activation
326
+ self.mlp = Mlp(in_features=dim, hidden_features=mlp_hidden_dim,
327
+ act_layer=mlp_activation, drop=drop)
328
+
329
+ pad = local_conv_size // 2
330
+ self.local_conv = Conv2d_BN(
331
+ dim, dim, ks=local_conv_size, stride=1, pad=pad, groups=dim)
332
+
333
+ def forward(self, x):
334
+ H, W = self.input_resolution
335
+ B, L, C = x.shape
336
+ assert L == H * W, "input feature has wrong size"
337
+ res_x = x
338
+ if H == self.window_size and W == self.window_size:
339
+ x = self.attn(x)
340
+ else:
341
+ x = x.view(B, H, W, C)
342
+ pad_b = (self.window_size - H %
343
+ self.window_size) % self.window_size
344
+ pad_r = (self.window_size - W %
345
+ self.window_size) % self.window_size
346
+ padding = pad_b > 0 or pad_r > 0
347
+
348
+ if padding:
349
+ x = F.pad(x, (0, 0, 0, pad_r, 0, pad_b))
350
+
351
+ pH, pW = H + pad_b, W + pad_r
352
+ nH = pH // self.window_size
353
+ nW = pW // self.window_size
354
+ # window partition
355
+ x = x.view(B, nH, self.window_size, nW, self.window_size, C).transpose(2, 3).reshape(
356
+ B * nH * nW, self.window_size * self.window_size, C)
357
+ x = self.attn(x)
358
+ # window reverse
359
+ x = x.view(B, nH, nW, self.window_size, self.window_size,
360
+ C).transpose(2, 3).reshape(B, pH, pW, C)
361
+
362
+ if padding:
363
+ x = x[:, :H, :W].contiguous()
364
+
365
+ x = x.view(B, L, C)
366
+
367
+ x = res_x + self.drop_path(x)
368
+
369
+ x = x.transpose(1, 2).reshape(B, C, H, W)
370
+ x = self.local_conv(x)
371
+ x = x.view(B, C, L).transpose(1, 2)
372
+
373
+ x = x + self.drop_path(self.mlp(x))
374
+ return x
375
+
376
+ def extra_repr(self) -> str:
377
+ return f"dim={self.dim}, input_resolution={self.input_resolution}, num_heads={self.num_heads}, " \
378
+ f"window_size={self.window_size}, mlp_ratio={self.mlp_ratio}"
379
+
380
+
381
+ class BasicLayer(nn.Module):
382
+ """ A basic TinyViT layer for one stage.
383
+
384
+ Args:
385
+ dim (int): Number of input channels.
386
+ input_resolution (tuple[int]): Input resolution.
387
+ depth (int): Number of blocks.
388
+ num_heads (int): Number of attention heads.
389
+ window_size (int): Local window size.
390
+ mlp_ratio (float): Ratio of mlp hidden dim to embedding dim.
391
+ drop (float, optional): Dropout rate. Default: 0.0
392
+ drop_path (float | tuple[float], optional): Stochastic depth rate. Default: 0.0
393
+ downsample (nn.Module | None, optional): Downsample layer at the end of the layer. Default: None
394
+ use_checkpoint (bool): Whether to use checkpointing to save memory. Default: False.
395
+ local_conv_size: the kernel size of the depthwise convolution between attention and MLP. Default: 3
396
+ activation: the activation function. Default: nn.GELU
397
+ out_dim: the output dimension of the layer. Default: dim
398
+ """
399
+
400
+ def __init__(self, dim, input_resolution, depth, num_heads, window_size,
401
+ mlp_ratio=4., drop=0.,
402
+ drop_path=0., downsample=None, use_checkpoint=False,
403
+ local_conv_size=3,
404
+ activation=nn.GELU,
405
+ out_dim=None,
406
+ ):
407
+
408
+ super().__init__()
409
+ self.dim = dim
410
+ self.input_resolution = input_resolution
411
+ self.depth = depth
412
+ self.use_checkpoint = use_checkpoint
413
+
414
+ # build blocks
415
+ self.blocks = nn.ModuleList([
416
+ TinyViTBlock(dim=dim, input_resolution=input_resolution,
417
+ num_heads=num_heads, window_size=window_size,
418
+ mlp_ratio=mlp_ratio,
419
+ drop=drop,
420
+ drop_path=drop_path[i] if isinstance(
421
+ drop_path, list) else drop_path,
422
+ local_conv_size=local_conv_size,
423
+ activation=activation,
424
+ )
425
+ for i in range(depth)])
426
+
427
+ # patch merging layer
428
+ if downsample is not None:
429
+ self.downsample = downsample(
430
+ input_resolution, dim=dim, out_dim=out_dim, activation=activation)
431
+ else:
432
+ self.downsample = None
433
+
434
+ def forward(self, x):
435
+ for blk in self.blocks:
436
+ if self.use_checkpoint:
437
+ x = checkpoint.checkpoint(blk, x)
438
+ else:
439
+ x = blk(x)
440
+ if self.downsample is not None:
441
+ x = self.downsample(x)
442
+ return x
443
+
444
+ def extra_repr(self) -> str:
445
+ return f"dim={self.dim}, input_resolution={self.input_resolution}, depth={self.depth}"
446
+
447
+ class LayerNorm2d(nn.Module):
448
+ def __init__(self, num_channels: int, eps: float = 1e-6) -> None:
449
+ super().__init__()
450
+ self.weight = nn.Parameter(torch.ones(num_channels))
451
+ self.bias = nn.Parameter(torch.zeros(num_channels))
452
+ self.eps = eps
453
+
454
+ def forward(self, x: torch.Tensor) -> torch.Tensor:
455
+ u = x.mean(1, keepdim=True)
456
+ s = (x - u).pow(2).mean(1, keepdim=True)
457
+ x = (x - u) / torch.sqrt(s + self.eps)
458
+ x = self.weight[:, None, None] * x + self.bias[:, None, None]
459
+ return x
460
+ class TinyViT(nn.Module):
461
+ def __init__(self, img_size=224, in_chans=3, num_classes=1000,
462
+ embed_dims=[96, 192, 384, 768], depths=[2, 2, 6, 2],
463
+ num_heads=[3, 6, 12, 24],
464
+ window_sizes=[7, 7, 14, 7],
465
+ mlp_ratio=4.,
466
+ drop_rate=0.,
467
+ drop_path_rate=0.1,
468
+ use_checkpoint=False,
469
+ mbconv_expand_ratio=4.0,
470
+ local_conv_size=3,
471
+ layer_lr_decay=1.0,
472
+ ):
473
+ super().__init__()
474
+ self.img_size=img_size
475
+ self.num_classes = num_classes
476
+ self.depths = depths
477
+ self.num_layers = len(depths)
478
+ self.mlp_ratio = mlp_ratio
479
+
480
+ activation = nn.GELU
481
+
482
+ self.patch_embed = PatchEmbed(in_chans=in_chans,
483
+ embed_dim=embed_dims[0],
484
+ resolution=img_size,
485
+ activation=activation)
486
+
487
+ patches_resolution = self.patch_embed.patches_resolution
488
+ self.patches_resolution = patches_resolution
489
+
490
+ # stochastic depth
491
+ dpr = [x.item() for x in torch.linspace(0, drop_path_rate,
492
+ sum(depths))] # stochastic depth decay rule
493
+
494
+ # build layers
495
+ self.layers = nn.ModuleList()
496
+ for i_layer in range(self.num_layers):
497
+ kwargs = dict(dim=embed_dims[i_layer],
498
+ input_resolution=(patches_resolution[0] // (2 ** (i_layer-1 if i_layer == 3 else i_layer)),
499
+ patches_resolution[1] // (2 ** (i_layer-1 if i_layer == 3 else i_layer))),
500
+ # input_resolution=(patches_resolution[0] // (2 ** i_layer),
501
+ # patches_resolution[1] // (2 ** i_layer)),
502
+ depth=depths[i_layer],
503
+ drop_path=dpr[sum(depths[:i_layer]):sum(depths[:i_layer + 1])],
504
+ downsample=PatchMerging if (
505
+ i_layer < self.num_layers - 1) else None,
506
+ use_checkpoint=use_checkpoint,
507
+ out_dim=embed_dims[min(
508
+ i_layer + 1, len(embed_dims) - 1)],
509
+ activation=activation,
510
+ )
511
+ if i_layer == 0:
512
+ layer = ConvLayer(
513
+ conv_expand_ratio=mbconv_expand_ratio,
514
+ **kwargs,
515
+ )
516
+ else:
517
+ layer = BasicLayer(
518
+ num_heads=num_heads[i_layer],
519
+ window_size=window_sizes[i_layer],
520
+ mlp_ratio=self.mlp_ratio,
521
+ drop=drop_rate,
522
+ local_conv_size=local_conv_size,
523
+ **kwargs)
524
+ self.layers.append(layer)
525
+
526
+ # Classifier head
527
+ self.norm_head = nn.LayerNorm(embed_dims[-1])
528
+ self.head = nn.Linear(
529
+ embed_dims[-1], num_classes) if num_classes > 0 else torch.nn.Identity()
530
+
531
+ # init weights
532
+ self.apply(self._init_weights)
533
+ self.set_layer_lr_decay(layer_lr_decay)
534
+ self.neck = nn.Sequential(
535
+ nn.Conv2d(
536
+ embed_dims[-1],#handongshen
537
+ 256,
538
+ kernel_size=1,
539
+ bias=False,
540
+ ),
541
+ LayerNorm2d(256),
542
+ nn.Conv2d(
543
+ 256,
544
+ 256,
545
+ kernel_size=3,
546
+ padding=1,
547
+ bias=False,
548
+ ),
549
+ LayerNorm2d(256),
550
+ )
551
+ def set_layer_lr_decay(self, layer_lr_decay):
552
+ decay_rate = layer_lr_decay
553
+
554
+ # layers -> blocks (depth)
555
+ depth = sum(self.depths)
556
+ lr_scales = [decay_rate ** (depth - i - 1) for i in range(depth)]
557
+ print("LR SCALES:", lr_scales)
558
+
559
+ def _set_lr_scale(m, scale):
560
+ for p in m.parameters():
561
+ p.lr_scale = scale
562
+
563
+ self.patch_embed.apply(lambda x: _set_lr_scale(x, lr_scales[0]))
564
+ i = 0
565
+ for layer in self.layers:
566
+ for block in layer.blocks:
567
+ block.apply(lambda x: _set_lr_scale(x, lr_scales[i]))
568
+ i += 1
569
+ if layer.downsample is not None:
570
+ layer.downsample.apply(
571
+ lambda x: _set_lr_scale(x, lr_scales[i - 1]))
572
+ assert i == depth
573
+ for m in [self.norm_head, self.head]:
574
+ m.apply(lambda x: _set_lr_scale(x, lr_scales[-1]))
575
+
576
+ for k, p in self.named_parameters():
577
+ p.param_name = k
578
+
579
+ def _check_lr_scale(m):
580
+ for p in m.parameters():
581
+ assert hasattr(p, 'lr_scale'), p.param_name
582
+
583
+ self.apply(_check_lr_scale)
584
+
585
+ def _init_weights(self, m):
586
+ if isinstance(m, nn.Linear):
587
+ trunc_normal_(m.weight, std=.02)
588
+ if isinstance(m, nn.Linear) and m.bias is not None:
589
+ nn.init.constant_(m.bias, 0)
590
+ elif isinstance(m, nn.LayerNorm):
591
+ nn.init.constant_(m.bias, 0)
592
+ nn.init.constant_(m.weight, 1.0)
593
+
594
+ @torch.jit.ignore
595
+ def no_weight_decay_keywords(self):
596
+ return {'attention_biases'}
597
+
598
+ def forward_features(self, x):
599
+ # x: (N, C, H, W)
600
+ x = self.patch_embed(x)
601
+
602
+ x = self.layers[0](x)
603
+ start_i = 1
604
+
605
+ for i in range(start_i, len(self.layers)):
606
+ layer = self.layers[i]
607
+ x = layer(x)
608
+ B,_,C=x.size()
609
+ x = x.view(B, 64, 64, C)
610
+ x=x.permute(0, 3, 1, 2)
611
+ x=self.neck(x)
612
+ return x
613
+
614
+ def forward(self, x):
615
+ x = self.forward_features(x)
616
+ #x = self.norm_head(x)
617
+ #x = self.head(x)
618
+ return x
619
+
620
+
621
+ _checkpoint_url_format = \
622
+ 'https://github.com/wkcn/TinyViT-model-zoo/releases/download/checkpoints/{}.pth'
623
+ _provided_checkpoints = {
624
+ 'tiny_vit_5m_224': 'tiny_vit_5m_22kto1k_distill',
625
+ 'tiny_vit_11m_224': 'tiny_vit_11m_22kto1k_distill',
626
+ 'tiny_vit_21m_224': 'tiny_vit_21m_22kto1k_distill',
627
+ 'tiny_vit_21m_384': 'tiny_vit_21m_22kto1k_384_distill',
628
+ 'tiny_vit_21m_512': 'tiny_vit_21m_22kto1k_512_distill',
629
+ }
630
+
631
+
632
+ def register_tiny_vit_model(fn):
633
+ '''Register a TinyViT model
634
+ It is a wrapper of `register_model` with loading the pretrained checkpoint.
635
+ '''
636
+ def fn_wrapper(pretrained=False, **kwargs):
637
+ model = fn()
638
+ if pretrained:
639
+ model_name = fn.__name__
640
+ assert model_name in _provided_checkpoints, \
641
+ f'Sorry that the checkpoint `{model_name}` is not provided yet.'
642
+ url = _checkpoint_url_format.format(
643
+ _provided_checkpoints[model_name])
644
+ checkpoint = torch.hub.load_state_dict_from_url(
645
+ url=url,
646
+ map_location='cpu', check_hash=False,
647
+ )
648
+ model.load_state_dict(checkpoint['model'])
649
+
650
+ return model
651
+
652
+ # rename the name of fn_wrapper
653
+ fn_wrapper.__name__ = fn.__name__
654
+ return register_model(fn_wrapper)
655
+
656
+
657
+ @register_tiny_vit_model
658
+ def tiny_vit_5m_224(pretrained=False, num_classes=1000, drop_path_rate=0.0):
659
+ return TinyViT(
660
+ num_classes=num_classes,
661
+ embed_dims=[64, 128, 160, 320],
662
+ depths=[2, 2, 6, 2],
663
+ num_heads=[2, 4, 5, 10],
664
+ window_sizes=[7, 7, 14, 7],
665
+ drop_path_rate=drop_path_rate,
666
+ )
667
+
668
+
669
+ @register_tiny_vit_model
670
+ def tiny_vit_11m_224(pretrained=False, num_classes=1000, drop_path_rate=0.1):
671
+ return TinyViT(
672
+ num_classes=num_classes,
673
+ embed_dims=[64, 128, 256, 448],
674
+ depths=[2, 2, 6, 2],
675
+ num_heads=[2, 4, 8, 14],
676
+ window_sizes=[7, 7, 14, 7],
677
+ drop_path_rate=drop_path_rate,
678
+ )
679
+
680
+
681
+ @register_tiny_vit_model
682
+ def tiny_vit_21m_224(pretrained=False, num_classes=1000, drop_path_rate=0.2):
683
+ return TinyViT(
684
+ num_classes=num_classes,
685
+ embed_dims=[96, 192, 384, 576],
686
+ depths=[2, 2, 6, 2],
687
+ num_heads=[3, 6, 12, 18],
688
+ window_sizes=[7, 7, 14, 7],
689
+ drop_path_rate=drop_path_rate,
690
+ )
691
+
692
+
693
+ @register_tiny_vit_model
694
+ def tiny_vit_21m_384(pretrained=False, num_classes=1000, drop_path_rate=0.1):
695
+ return TinyViT(
696
+ img_size=384,
697
+ num_classes=num_classes,
698
+ embed_dims=[96, 192, 384, 576],
699
+ depths=[2, 2, 6, 2],
700
+ num_heads=[3, 6, 12, 18],
701
+ window_sizes=[12, 12, 24, 12],
702
+ drop_path_rate=drop_path_rate,
703
+ )
704
+
705
+
706
+ @register_tiny_vit_model
707
+ def tiny_vit_21m_512(pretrained=False, num_classes=1000, drop_path_rate=0.1):
708
+ return TinyViT(
709
+ img_size=512,
710
+ num_classes=num_classes,
711
+ embed_dims=[96, 192, 384, 576],
712
+ depths=[2, 2, 6, 2],
713
+ num_heads=[3, 6, 12, 18],
714
+ window_sizes=[16, 16, 32, 16],
715
+ drop_path_rate=drop_path_rate,
716
+ )
segment_anything/segment_anything/modeling/__init__.py ADDED
@@ -0,0 +1,12 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Copyright (c) Meta Platforms, Inc. and affiliates.
2
+ # All rights reserved.
3
+
4
+ # This source code is licensed under the license found in the
5
+ # LICENSE file in the root directory of this source tree.
6
+
7
+ from .sam import Sam
8
+ from .image_encoder import ImageEncoderViT
9
+ from .mask_decoder_hq import MaskDecoderHQ
10
+ from .mask_decoder import MaskDecoder
11
+ from .prompt_encoder import PromptEncoder
12
+ from .transformer import TwoWayTransformer