Tieu Long Phan commited on
Commit
fc5ee4a
1 Parent(s): 4fb0e8d

Add Dockerfile and application code

Browse files
Files changed (3) hide show
  1. Dockerfile +12 -0
  2. app.py +18 -0
  3. requirements.txt +3 -0
Dockerfile ADDED
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+ FROM python:3.9
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+
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+ RUN apt-get update && apt-get install -y python3-rdkit
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+
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+ COPY . /app
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+ WORKDIR /app
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+
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+ RUN pip install -r requirements.txt
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+
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+ EXPOSE 5000
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+
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+ CMD ["python", "app.py"]
app.py ADDED
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+ from rdkit import Chem
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+ from rdkit.Chem import Draw
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+ from flask import Flask, request, jsonify
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+
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+ app = Flask(__name__)
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+
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+ @app.route('/convert', methods=['POST'])
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+ def convert_smiles():
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+ data = request.json
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+ smiles = data['smiles']
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+ mol = Chem.MolFromSmiles(smiles)
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+ img = Draw.MolToImage(mol)
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+ img.save('molecule.png')
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+ # Add PyMol code for 3D structure
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+ return jsonify({"message": "Conversion complete"})
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+
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+ if __name__ == '__main__':
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+ app.run(debug=True)
requirements.txt ADDED
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+ flask==3.0.0
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+ rdkit==2023.9.2
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+ # Replace with the actual version numbers and add pymol or other packages as needed.