MultiMed / app.py
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Adding gpt feature
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# Welcome to Team Tonic's MultiMed
from gradio_client import Client
import os
import numpy as np
import base64
import gradio as gr
import requests
import json
import dotenv
from scipy.io.wavfile import write
import PIL
dotenv.load_dotenv()
client = Client("facebook/seamless_m4t")
def process_speech(audio):
"""
processing sound using seamless_m4t
"""
audio_name = f"{np.random.randint(0, 100)}.wav"
sr, data = audio
write(audio_name, sr, data.astype(np.int16))
out = client.predict(
"S2TT",
"file",
None,
audio_name,
"",
"French",# source language
"English",# target language
api_name="/run",
)
out = out[1] # get the text
try :
return f"{out}"
except Exception as e :
return f"{e}"
def process_image(image) :
img_name = f"{np.random.randint(0, 100)}.jpg"
PIL.Image.fromarray(image.astype('uint8'), 'RGB').save(img_name)
image = open(img_name, "rb").read()
base64_image = base64_image = base64.b64encode(image).decode('utf-8')
openai_api_key = os.getenv('OPENAI_API_KEY')
# oai_org = os.getenv('OAI_ORG')
headers = {
"Content-Type": "application/json",
"Authorization": f"Bearer {openai_api_key}"
}
payload = {
"model": "gpt-4-vision-preview",
"messages": [
{
"role": "user",
"content": [
{
"type": "text",
"text": "What's in this image?"
},
{
"type": "image_url",
"image_url": {
"url": f"data:image/jpeg;base64,{base64_image}"
}
}
]
}
],
"max_tokens": 300
}
response = requests.post("https://api.openai.com/v1/chat/completions", headers=headers, json=payload)
try :
out = response.json()
out = out["choices"][0]["message"]["content"]
return f"{out}"
except Exception as e :
return f"{e}"
def query_vectara(text):
user_message = text
# Read authentication parameters from the .env file
CUSTOMER_ID = os.getenv('CUSTOMER_ID')
CORPUS_ID = os.getenv('CORPUS_ID')
API_KEY = os.getenv('API_KEY')
# Define the headers
api_key_header = {
"customer-id": CUSTOMER_ID,
"x-api-key": API_KEY
}
# Define the request body in the structure provided in the example
request_body = {
"query": [
{
"query": user_message,
"queryContext": "",
"start": 1,
"numResults": 50,
"contextConfig": {
"charsBefore": 0,
"charsAfter": 0,
"sentencesBefore": 2,
"sentencesAfter": 2,
"startTag": "%START_SNIPPET%",
"endTag": "%END_SNIPPET%",
},
"rerankingConfig": {
"rerankerId": 272725718,
"mmrConfig": {
"diversityBias": 0.35
}
},
"corpusKey": [
{
"customerId": CUSTOMER_ID,
"corpusId": CORPUS_ID,
"semantics": 0,
"metadataFilter": "",
"lexicalInterpolationConfig": {
"lambda": 0
},
"dim": []
}
],
"summary": [
{
"maxSummarizedResults": 5,
"responseLang": "auto",
"summarizerPromptName": "vectara-summary-ext-v1.2.0"
}
]
}
]
}
# Make the API request using Gradio
response = requests.post(
"https://api.vectara.io/v1/query",
json=request_body, # Use json to automatically serialize the request body
verify=True,
headers=api_key_header
)
if response.status_code == 200:
query_data = response.json()
if query_data:
sources_info = []
# Extract the summary.
summary = query_data['responseSet'][0]['summary'][0]['text']
# Iterate over all response sets
for response_set in query_data.get('responseSet', []):
# Extract sources
# Limit to top 5 sources.
for source in response_set.get('response', [])[:5]:
source_metadata = source.get('metadata', [])
source_info = {}
for metadata in source_metadata:
metadata_name = metadata.get('name', '')
metadata_value = metadata.get('value', '')
if metadata_name == 'title':
source_info['title'] = metadata_value
elif metadata_name == 'author':
source_info['author'] = metadata_value
elif metadata_name == 'pageNumber':
source_info['page number'] = metadata_value
if source_info:
sources_info.append(source_info)
result = {"summary": summary, "sources": sources_info}
return f"{json.dumps(result, indent=2)}"
else:
return "No data found in the response."
else:
return f"Error: {response.status_code}"
def convert_to_markdown(vectara_response_json):
vectara_response = json.loads(vectara_response_json)
if vectara_response:
summary = vectara_response.get('summary', 'No summary available')
sources_info = vectara_response.get('sources', [])
# Format the summary as Markdown
markdown_summary = f'**Summary:** {summary}\n\n'
# Format the sources as a numbered list
markdown_sources = ""
for i, source_info in enumerate(sources_info):
author = source_info.get('author', 'Unknown author')
title = source_info.get('title', 'Unknown title')
page_number = source_info.get('page number', 'Unknown page number')
markdown_sources += f"{i+1}. {title} by {author}, Page {page_number}\n"
return f"{markdown_summary}**Sources:**\n{markdown_sources}"
else:
return "No data found in the response."
# Main function to handle the Gradio interface logic
def process_and_query(text=None, image=None, audio=None):
try:
print(f"text_value : {text}")
# If an image is provided, process it with OpenAI and use the response as the text query for Vectara
if image is not None:
text = process_image(image)
print("audio_value is : ", audio)
if audio is not None:
text = process_speech(audio)
# this should print in the log the text that was extracted from the audio
print("process_speech_out : ", text)
# Now, use the text (either provided by the user or obtained from OpenAI) to query Vectara
vectara_response_json = query_vectara(text)
markdown_output = convert_to_markdown(vectara_response_json)
client = OpenAI()
prompt ="Answer in the same language, write it better, more understandable and shorter:"
markdown_output_final = markdown_output
completion = client.chat.completions.create(
model="gpt-3.5-turbo",
messages=[
{"role": "system", "content": prompt},
{"role": "user", "content": markdown_output_final}
]
)
final_response= completion.choices[0].message.content
return final_response
except Exception as e:
return str(e)
# Define the Gradio interface
iface = gr.Interface(
fn=process_and_query,
inputs=[
gr.Textbox(label="Input Text"),
gr.Image(label="Upload Image"),
gr.Audio(label="talk", type="filepath",
sources="microphone", visible=True),
],
outputs=[gr.Markdown(label="Output Text")],
title="👋🏻Welcome to ⚕🗣️😷MultiMed - Access Chat ⚕🗣️😷",
description='''
### How To Use ⚕🗣️😷MultiMed⚕:
#### 🗣️📝Interact with ⚕🗣️😷MultiMed⚕ in any language using audio or text!
#### 🗣️📝 This is an educational and accessible conversational tool to improve wellness and sanitation in support of public health.
#### 📚🌟💼 The knowledge base is composed of publicly available medical and health sources in multiple languages. We also used [Kelvalya/MedAware](https://huggingface.co/datasets/keivalya/MedQuad-MedicalQnADataset) that we processed and converted to HTML. The quality of the answers depends on the quality of the dataset, so if you want to see some data represented here, do [get in touch](https://discord.gg/GWpVpekp). You can also use 😷MultiMed⚕️ on your own data & in your own way by cloning this space. 🧬🔬🔍 Simply click here: <a style="display:inline-block" href="https://huggingface.co/spaces/TeamTonic/MultiMed?duplicate=true"><img src="https://img.shields.io/badge/-Duplicate%20Space-blue?labelColor=white&style=flat&logo=data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAAXNSR0IArs4c6QAAAP5JREFUOE+lk7FqAkEURY+ltunEgFXS2sZGIbXfEPdLlnxJyDdYB62sbbUKpLbVNhyYFzbrrA74YJlh9r079973psed0cvUD4A+4HoCjsA85X0Dfn/RBLBgBDxnQPfAEJgBY+A9gALA4tcbamSzS4xq4FOQAJgCDwV2CPKV8tZAJcAjMMkUe1vX+U+SMhfAJEHasQIWmXNN3abzDwHUrgcRGmYcgKe0bxrblHEB4E/pndMazNpSZGcsZdBlYJcEL9Afo75molJyM2FxmPgmgPqlWNLGfwZGG6UiyEvLzHYDmoPkDDiNm9JR9uboiONcBXrpY1qmgs21x1QwyZcpvxt9NS09PlsPAAAAAElFTkSuQmCC&logoWidth=14" alt="Duplicate Space"></a></h3>
#### Join us : 🌟TeamTonic🌟 is always making cool demos! Join our active builder's🛠️community on 👻Discord: [Discord](https://discord.gg/GWpVpekp) On 🤗Huggingface: [TeamTonic](https://huggingface.co/TeamTonic) & [MultiTransformer](https://huggingface.co/MultiTransformer) On 🌐Github: [Polytonic](https://github.com/tonic-ai) & contribute to 🌟 [PolyGPT](https://github.com/tonic-ai/polygpt-alpha)"
''',
theme='ParityError/Anime',
examples=[
["What is the proper treatment for buccal herpes?"],
["Male, 40 presenting with swollen glands and a rash"],
["How does cellular metabolism work TCA cycle"],
["What special care must be provided to children with chicken pox?"],
["When and how often should I wash my hands ?"],
["بکل ہرپس کا صحیح علاج کیا ہے؟"],
["구강 헤르페스의 적절한 치료법은 무엇입니까?"],
["Je, ni matibabu gani sahihi kwa herpes ya buccal?"],
],
)
iface.launch()