Agentic-RagBot / config /biomarker_references.json
Nikhil Pravin Pise
Refactor: Improve code quality, security, and configuration
ad2e847
{
"biomarkers": {
"Glucose": {
"unit": "mg/dL",
"normal_range": {"min": 70, "max": 100},
"critical_low": 54,
"critical_high": 400,
"type": "fasting",
"gender_specific": false,
"description": "Fasting blood glucose level",
"clinical_significance": {
"low": "Hypoglycemia - risk of confusion, seizures",
"high": "Hyperglycemia - diabetes risk, requires further testing"
}
},
"Cholesterol": {
"unit": "mg/dL",
"normal_range": {"min": 125, "max": 200},
"critical_low": 100,
"critical_high": 240,
"type": "total",
"gender_specific": false,
"description": "Total cholesterol level",
"clinical_significance": {
"low": "Malnutrition, liver disease, or hyperthyroidism",
"high": "Increased cardiovascular disease risk"
}
},
"Hemoglobin": {
"unit": "g/dL",
"normal_range": {
"male": {"min": 13.5, "max": 17.5},
"female": {"min": 12.0, "max": 15.5}
},
"critical_low": 7,
"critical_high": 18,
"gender_specific": true,
"description": "Oxygen-carrying protein in red blood cells",
"clinical_significance": {
"low": "Anemia - fatigue, weakness, organ hypoxia",
"high": "Polycythemia - increased blood viscosity, clotting risk"
}
},
"Platelets": {
"unit": "cells/μL",
"normal_range": {"min": 150000, "max": 400000},
"critical_low": 50000,
"critical_high": 1000000,
"gender_specific": false,
"description": "Blood clotting cells",
"clinical_significance": {
"low": "Thrombocytopenia - bleeding risk",
"high": "Thrombocytosis - clotting risk"
}
},
"White Blood Cells": {
"unit": "cells/μL",
"normal_range": {"min": 4000, "max": 11000},
"critical_low": 2000,
"critical_high": 30000,
"gender_specific": false,
"description": "Immune system cells",
"clinical_significance": {
"low": "Leukopenia - infection risk",
"high": "Leukocytosis - infection or leukemia"
}
},
"Red Blood Cells": {
"unit": "million/μL",
"normal_range": {
"male": {"min": 4.5, "max": 5.9},
"female": {"min": 4.0, "max": 5.2}
},
"critical_low": 3.0,
"critical_high": null,
"gender_specific": true,
"description": "Oxygen-carrying blood cells",
"clinical_significance": {
"low": "Severe anemia - organ damage risk"
}
},
"Hematocrit": {
"unit": "%",
"normal_range": {
"male": {"min": 38.8, "max": 50.0},
"female": {"min": 34.9, "max": 44.5}
},
"critical_low": 25,
"critical_high": 60,
"gender_specific": true,
"description": "Percentage of blood volume occupied by red blood cells",
"clinical_significance": {
"low": "Severe anemia",
"high": "Polycythemia - stroke risk"
}
},
"Mean Corpuscular Volume": {
"unit": "fL",
"normal_range": {"min": 80, "max": 100},
"critical_low": null,
"critical_high": null,
"gender_specific": false,
"description": "Average red blood cell size",
"clinical_significance": {
"low": "Microcytic anemia (iron deficiency, thalassemia)",
"high": "Macrocytic anemia (B12/folate deficiency)"
}
},
"Mean Corpuscular Hemoglobin": {
"unit": "pg",
"normal_range": {"min": 27, "max": 33},
"critical_low": null,
"critical_high": null,
"gender_specific": false,
"description": "Average hemoglobin per red blood cell",
"clinical_significance": {
"low": "Hypochromic anemia"
}
},
"Mean Corpuscular Hemoglobin Concentration": {
"unit": "g/dL",
"normal_range": {"min": 32, "max": 36},
"critical_low": null,
"critical_high": null,
"gender_specific": false,
"description": "Average hemoglobin concentration in red blood cells",
"clinical_significance": {
"low": "Hypochromic anemia"
}
},
"Insulin": {
"unit": "μIU/mL",
"normal_range": {"min": 2.6, "max": 24.9},
"critical_low": null,
"critical_high": 25,
"type": "fasting",
"gender_specific": false,
"description": "Fasting insulin level",
"clinical_significance": {
"high": "Insulin resistance - diabetes/metabolic syndrome risk"
}
},
"BMI": {
"unit": "kg/m²",
"normal_range": {"min": 18.5, "max": 24.9},
"critical_low": 15,
"critical_high": 50,
"gender_specific": false,
"description": "Body Mass Index",
"clinical_significance": {
"low": "Underweight - malnutrition risk",
"high": "Obese - cardiovascular and metabolic disease risk"
}
},
"Systolic Blood Pressure": {
"unit": "mmHg",
"normal_range": {"min": 90, "max": 120},
"critical_low": 70,
"critical_high": 180,
"gender_specific": false,
"description": "Blood pressure during heart contraction",
"clinical_significance": {
"low": "Hypotension - dizziness, fainting",
"high": "Hypertension - cardiovascular disease risk"
}
},
"Diastolic Blood Pressure": {
"unit": "mmHg",
"normal_range": {"min": 60, "max": 80},
"critical_low": 40,
"critical_high": 120,
"gender_specific": false,
"description": "Blood pressure during heart relaxation",
"clinical_significance": {
"low": "Hypotension",
"high": "Hypertension"
}
},
"Triglycerides": {
"unit": "mg/dL",
"normal_range": {"min": 40, "max": 150},
"critical_low": null,
"critical_high": 500,
"gender_specific": false,
"description": "Type of blood fat",
"clinical_significance": {
"high": "Pancreatitis risk, cardiovascular disease"
}
},
"HbA1c": {
"unit": "%",
"normal_range": {"min": 4.0, "max": 5.7},
"critical_low": null,
"critical_high": 14,
"gender_specific": false,
"description": "3-month average blood glucose",
"clinical_significance": {
"high": "Diabetes (≥6.5%), Prediabetes (5.7-6.4%)"
}
},
"LDL Cholesterol": {
"unit": "mg/dL",
"normal_range": {"min": 40, "max": 100},
"critical_low": null,
"critical_high": 190,
"gender_specific": false,
"description": "Low-density lipoprotein (bad cholesterol)",
"clinical_significance": {
"high": "Atherosclerosis, heart disease risk"
}
},
"HDL Cholesterol": {
"unit": "mg/dL",
"normal_range": {
"male": {"min": 40, "max": 100},
"female": {"min": 50, "max": 100}
},
"critical_low": 25,
"critical_high": null,
"gender_specific": true,
"description": "High-density lipoprotein (good cholesterol)",
"clinical_significance": {
"low": "Cardiovascular disease risk"
}
},
"ALT": {
"unit": "U/L",
"normal_range": {"min": 7, "max": 56},
"critical_low": null,
"critical_high": 200,
"gender_specific": false,
"description": "Alanine aminotransferase (liver enzyme)",
"clinical_significance": {
"high": "Liver damage or disease"
}
},
"AST": {
"unit": "U/L",
"normal_range": {"min": 10, "max": 40},
"critical_low": null,
"critical_high": 200,
"gender_specific": false,
"description": "Aspartate aminotransferase (liver/heart enzyme)",
"clinical_significance": {
"high": "Liver or heart damage"
}
},
"Heart Rate": {
"unit": "bpm",
"normal_range": {"min": 60, "max": 100},
"critical_low": 50,
"critical_high": 120,
"gender_specific": false,
"description": "Beats per minute",
"clinical_significance": {
"low": "Bradycardia - dizziness, fatigue",
"high": "Tachycardia - palpitations, anxiety"
}
},
"Creatinine": {
"unit": "mg/dL",
"normal_range": {
"male": {"min": 0.7, "max": 1.3},
"female": {"min": 0.6, "max": 1.1}
},
"critical_low": null,
"critical_high": 3.0,
"gender_specific": true,
"description": "Kidney function marker",
"clinical_significance": {
"high": "Kidney dysfunction or failure"
}
},
"Troponin": {
"unit": "ng/mL",
"normal_range": {"min": 0, "max": 0.04},
"critical_low": null,
"critical_high": 0.4,
"gender_specific": false,
"description": "Cardiac muscle damage marker",
"clinical_significance": {
"high": "Myocardial injury or infarction (heart attack)"
}
},
"C-reactive Protein": {
"unit": "mg/L",
"normal_range": {"min": 0, "max": 3.0},
"critical_low": null,
"critical_high": 10,
"gender_specific": false,
"description": "Inflammation marker",
"clinical_significance": {
"high": "Acute inflammation or infection"
}
},
"Urea": {
"unit": "mg/dL",
"normal_range": {"min": 7, "max": 20},
"critical_low": null,
"critical_high": 50,
"gender_specific": false,
"description": "Blood urea nitrogen (kidney function marker)",
"clinical_significance": {
"high": "Kidney dysfunction, dehydration, or high-protein diet",
"low": "Liver disease or malnutrition"
}
},
"TSH": {
"unit": "mIU/L",
"normal_range": {"min": 0.4, "max": 4.0},
"critical_low": 0.1,
"critical_high": 10,
"gender_specific": false,
"description": "Thyroid-stimulating hormone",
"clinical_significance": {
"low": "Hyperthyroidism",
"high": "Hypothyroidism"
}
},
"T3": {
"unit": "ng/dL",
"normal_range": {"min": 80, "max": 200},
"critical_low": null,
"critical_high": null,
"gender_specific": false,
"description": "Triiodothyronine (thyroid hormone)",
"clinical_significance": {
"low": "Hypothyroidism",
"high": "Hyperthyroidism"
}
},
"T4": {
"unit": "μg/dL",
"normal_range": {"min": 5.0, "max": 12.0},
"critical_low": null,
"critical_high": null,
"gender_specific": false,
"description": "Thyroxine (thyroid hormone)",
"clinical_significance": {
"low": "Hypothyroidism",
"high": "Hyperthyroidism"
}
},
"Sodium": {
"unit": "mEq/L",
"normal_range": {"min": 136, "max": 145},
"critical_low": 120,
"critical_high": 155,
"gender_specific": false,
"description": "Blood sodium level (electrolyte)",
"clinical_significance": {
"low": "Hyponatremia - confusion, seizures",
"high": "Hypernatremia - dehydration, thirst"
}
},
"Potassium": {
"unit": "mEq/L",
"normal_range": {"min": 3.5, "max": 5.0},
"critical_low": 2.5,
"critical_high": 6.5,
"gender_specific": false,
"description": "Blood potassium level (electrolyte)",
"clinical_significance": {
"low": "Hypokalemia - muscle weakness, arrhythmia",
"high": "Hyperkalemia - cardiac arrest risk"
}
},
"Calcium": {
"unit": "mg/dL",
"normal_range": {"min": 8.5, "max": 10.5},
"critical_low": 7.0,
"critical_high": 12.0,
"gender_specific": false,
"description": "Blood calcium level",
"clinical_significance": {
"low": "Hypocalcemia - muscle cramps, numbness",
"high": "Hypercalcemia - kidney stones, bone pain"
}
},
"Chloride": {
"unit": "mEq/L",
"normal_range": {"min": 98, "max": 106},
"critical_low": 80,
"critical_high": 120,
"gender_specific": false,
"description": "Blood chloride level (electrolyte)",
"clinical_significance": {
"low": "Metabolic alkalosis",
"high": "Metabolic acidosis"
}
},
"Bicarbonate": {
"unit": "mEq/L",
"normal_range": {"min": 22, "max": 28},
"critical_low": 15,
"critical_high": 35,
"gender_specific": false,
"description": "Blood bicarbonate (acid-base balance)",
"clinical_significance": {
"low": "Metabolic acidosis",
"high": "Metabolic alkalosis"
}
},
"Uric_Acid": {
"unit": "mg/dL",
"normal_range": {
"male": {"min": 3.4, "max": 7.0},
"female": {"min": 2.4, "max": 6.0}
},
"critical_low": null,
"critical_high": 10,
"gender_specific": true,
"description": "Blood uric acid level",
"clinical_significance": {
"high": "Gout risk, kidney stone risk"
}
},
"Total_Protein": {
"unit": "g/dL",
"normal_range": {"min": 6.0, "max": 8.3},
"critical_low": 4.5,
"critical_high": null,
"gender_specific": false,
"description": "Total serum protein",
"clinical_significance": {
"low": "Liver disease, malnutrition, kidney disease",
"high": "Chronic inflammation, multiple myeloma"
}
},
"Albumin": {
"unit": "g/dL",
"normal_range": {"min": 3.5, "max": 5.5},
"critical_low": 2.0,
"critical_high": null,
"gender_specific": false,
"description": "Serum albumin (liver function)",
"clinical_significance": {
"low": "Liver disease, malnutrition, kidney disease"
}
},
"Globulin": {
"unit": "g/dL",
"normal_range": {"min": 2.0, "max": 3.5},
"critical_low": null,
"critical_high": null,
"gender_specific": false,
"description": "Serum globulin (immune proteins)",
"clinical_significance": {
"low": "Immune deficiency",
"high": "Chronic inflammation, liver disease"
}
},
"AG_Ratio": {
"unit": "ratio",
"normal_range": {"min": 1.1, "max": 2.5},
"critical_low": null,
"critical_high": null,
"gender_specific": false,
"description": "Albumin/Globulin ratio",
"clinical_significance": {
"low": "Liver disease, autoimmune conditions",
"high": "Generally not clinically significant"
}
},
"Bilirubin_Total": {
"unit": "mg/dL",
"normal_range": {"min": 0.1, "max": 1.2},
"critical_low": null,
"critical_high": 5.0,
"gender_specific": false,
"description": "Total bilirubin (liver function marker)",
"clinical_significance": {
"high": "Liver disease, bile duct obstruction, hemolysis"
}
},
"ALP": {
"unit": "U/L",
"normal_range": {"min": 44, "max": 147},
"critical_low": null,
"critical_high": 500,
"gender_specific": false,
"description": "Alkaline phosphatase (liver/bone enzyme)",
"clinical_significance": {
"high": "Liver disease, bone disorders, bile duct issues"
}
},
"BUN": {
"unit": "mg/dL",
"normal_range": {"min": 7, "max": 20},
"critical_low": null,
"critical_high": 50,
"gender_specific": false,
"description": "Blood urea nitrogen (kidney function)",
"clinical_significance": {
"high": "Kidney dysfunction, dehydration"
}
},
"BUN_Creatinine_Ratio": {
"unit": "ratio",
"normal_range": {"min": 10, "max": 20},
"critical_low": null,
"critical_high": null,
"gender_specific": false,
"description": "BUN to Creatinine ratio",
"clinical_significance": {
"high": "Pre-renal cause (dehydration, GI bleeding)",
"low": "Intrinsic renal disease, liver disease"
}
},
"VLDL": {
"unit": "mg/dL",
"normal_range": {"min": 2, "max": 30},
"critical_low": null,
"critical_high": null,
"gender_specific": false,
"description": "Very low-density lipoprotein cholesterol",
"clinical_significance": {
"high": "Increased cardiovascular risk"
}
}
}
}