Duplicate from bhaskartripathi/pdfChatter

Co-authored-by: Bhaskar Tripathi <bhaskartripathi@users.noreply.huggingface.co>

.gitattributes

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+*.7z filter=lfs diff=lfs merge=lfs -text
+*.arrow filter=lfs diff=lfs merge=lfs -text
+*.bin filter=lfs diff=lfs merge=lfs -text
+*.bz2 filter=lfs diff=lfs merge=lfs -text
+*.ckpt filter=lfs diff=lfs merge=lfs -text
+*.ftz filter=lfs diff=lfs merge=lfs -text
+*.gz filter=lfs diff=lfs merge=lfs -text
+*.h5 filter=lfs diff=lfs merge=lfs -text
+*.joblib filter=lfs diff=lfs merge=lfs -text
+*.lfs.* filter=lfs diff=lfs merge=lfs -text
+*.mlmodel filter=lfs diff=lfs merge=lfs -text
+*.model filter=lfs diff=lfs merge=lfs -text
+*.msgpack filter=lfs diff=lfs merge=lfs -text
+*.npy filter=lfs diff=lfs merge=lfs -text
+*.npz filter=lfs diff=lfs merge=lfs -text
+*.onnx filter=lfs diff=lfs merge=lfs -text
+*.ot filter=lfs diff=lfs merge=lfs -text
+*.parquet filter=lfs diff=lfs merge=lfs -text
+*.pb filter=lfs diff=lfs merge=lfs -text
+*.pickle filter=lfs diff=lfs merge=lfs -text
+*.pkl filter=lfs diff=lfs merge=lfs -text
+*.pt filter=lfs diff=lfs merge=lfs -text
+*.pth filter=lfs diff=lfs merge=lfs -text
+*.rar filter=lfs diff=lfs merge=lfs -text
+*.safetensors filter=lfs diff=lfs merge=lfs -text
+saved_model/**/* filter=lfs diff=lfs merge=lfs -text
+*.tar.* filter=lfs diff=lfs merge=lfs -text
+*.tflite filter=lfs diff=lfs merge=lfs -text
+*.tgz filter=lfs diff=lfs merge=lfs -text
+*.wasm filter=lfs diff=lfs merge=lfs -text
+*.xz filter=lfs diff=lfs merge=lfs -text
+*.zip filter=lfs diff=lfs merge=lfs -text
+*.zst filter=lfs diff=lfs merge=lfs -text
+*tfevents* filter=lfs diff=lfs merge=lfs -text

README.md

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+---
+title: PdfChatter
+emoji: 🏢
+colorFrom: indigo
+colorTo: green
+sdk: gradio
+sdk_version: 3.20.1
+app_file: app.py
+pinned: false
+license: afl-3.0
+duplicated_from: bhaskartripathi/pdfChatter
+---
+
+Check out the configuration reference at https://huggingface.co/docs/hub/spaces-config-reference

app.py

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+import urllib.request
+import fitz
+import re
+import numpy as np
+import tensorflow_hub as hub
+import openai
+import gradio as gr
+import os
+from sklearn.neighbors import NearestNeighbors
+
+def download_pdf(url, output_path):
+    urllib.request.urlretrieve(url, output_path)
+
+
+def preprocess(text):
+    text = text.replace('\n', ' ')
+    text = re.sub('\s+', ' ', text)
+    return text
+
+
+def pdf_to_text(path, start_page=1, end_page=None):
+    doc = fitz.open(path)
+    total_pages = doc.page_count
+
+    if end_page is None:
+        end_page = total_pages
+
+    text_list = []
+
+    for i in range(start_page-1, end_page):
+        text = doc.load_page(i).get_text("text")
+        text = preprocess(text)
+        text_list.append(text)
+
+    doc.close()
+    return text_list
+
+
+def text_to_chunks(texts, word_length=150, start_page=1):
+    text_toks = [t.split(' ') for t in texts]
+    page_nums = []
+    chunks = []
+    
+    for idx, words in enumerate(text_toks):
+        for i in range(0, len(words), word_length):
+            chunk = words[i:i+word_length]
+            if (i+word_length) > len(words) and (len(chunk) < word_length) and (
+                len(text_toks) != (idx+1)):
+                text_toks[idx+1] = chunk + text_toks[idx+1]
+                continue
+            chunk = ' '.join(chunk).strip()
+            chunk = f'[{idx+start_page}]' + ' ' + '"' + chunk + '"'
+            chunks.append(chunk)
+    return chunks
+
+
+class SemanticSearch:
+    
+    def __init__(self):
+        self.use = hub.load('https://tfhub.dev/google/universal-sentence-encoder/4')
+        self.fitted = False
+    
+    
+    def fit(self, data, batch=1000, n_neighbors=5):
+        self.data = data
+        self.embeddings = self.get_text_embedding(data, batch=batch)
+        n_neighbors = min(n_neighbors, len(self.embeddings))
+        self.nn = NearestNeighbors(n_neighbors=n_neighbors)
+        self.nn.fit(self.embeddings)
+        self.fitted = True
+    
+    
+    def __call__(self, text, return_data=True):
+        inp_emb = self.use([text])
+        neighbors = self.nn.kneighbors(inp_emb, return_distance=False)[0]
+        
+        if return_data:
+            return [self.data[i] for i in neighbors]
+        else:
+            return neighbors
+    
+    
+    def get_text_embedding(self, texts, batch=1000):
+        embeddings = []
+        for i in range(0, len(texts), batch):
+            text_batch = texts[i:(i+batch)]
+            emb_batch = self.use(text_batch)
+            embeddings.append(emb_batch)
+        embeddings = np.vstack(embeddings)
+        return embeddings
+
+
+
+def load_recommender(path, start_page=1):
+    global recommender
+    texts = pdf_to_text(path, start_page=start_page)
+    chunks = text_to_chunks(texts, start_page=start_page)
+    recommender.fit(chunks)
+    return 'Corpus Loaded.'
+
+
+def generate_text(openAI_key,prompt, engine="text-davinci-003"):
+    openai.api_key = openAI_key
+    completions = openai.Completion.create(
+        engine=engine,
+        prompt=prompt,
+        max_tokens=512,
+        n=1,
+        stop=None,
+        temperature=0.7,
+    )
+    message = completions.choices[0].text
+    return message
+
+
+def generate_answer(question,openAI_key):
+    topn_chunks = recommender(question)
+    prompt = ""
+    prompt += 'search results:\n\n'
+    for c in topn_chunks:
+        prompt += c + '\n\n'
+        
+    prompt += "Instructions: Compose a comprehensive reply to the query using the search results given. "\
+              "Cite each reference using [number] notation (every result has this number at the beginning). "\
+              "Citation should be done at the end of each sentence. If the search results mention multiple subjects "\
+              "with the same name, create separate answers for each. Only include information found in the results and "\
+              "don't add any additional information. Make sure the answer is correct and don't output false content. "\
+              "If the text does not relate to the query, simply state 'Found Nothing'. Ignore outlier "\
+              "search results which has nothing to do with the question. Only answer what is asked. The "\
+              "answer should be short and concise.\n\nQuery: {question}\nAnswer: "
+    
+    prompt += f"Query: {question}\nAnswer:"
+    answer = generate_text(openAI_key, prompt,"text-davinci-003")
+    return answer
+
+
+def question_answer(url, file, question,openAI_key):
+    if openAI_key.strip()=='':
+        return '[ERROR]: Please enter you Open AI Key. Get your key here : https://platform.openai.com/account/api-keys'
+    if url.strip() == '' and file == None:
+        return '[ERROR]: Both URL and PDF is empty. Provide atleast one.'
+    
+    if url.strip() != '' and file != None:
+        return '[ERROR]: Both URL and PDF is provided. Please provide only one (eiter URL or PDF).'
+
+    if url.strip() != '':
+        glob_url = url
+        download_pdf(glob_url, 'corpus.pdf')
+        load_recommender('corpus.pdf')
+
+    else:
+        old_file_name = file.name
+        file_name = file.name
+        file_name = file_name[:-12] + file_name[-4:]
+        os.rename(old_file_name, file_name)
+        load_recommender(file_name)
+
+    if question.strip() == '':
+        return '[ERROR]: Question field is empty'
+
+    return generate_answer(question,openAI_key)
+
+
+recommender = SemanticSearch()
+
+title = 'PDF GPT'
+description = """ What is PDF GPT ?
+1. The problem is that Open AI has a 4K token limit and cannot take an entire PDF file as input. Additionally, it sometimes returns irrelevant responses due to poor embeddings. ChatGPT cannot directly talk to external data. The solution is PDF GPT, which allows you to chat with an uploaded PDF file using GPT functionalities. The application breaks the document into smaller chunks and generates embeddings using a powerful Deep Averaging Network Encoder. A semantic search is performed on your query, and the top relevant chunks are used to generate a response.
+2. The returned response can even cite the page number in square brackets([]) where the information is located, adding credibility to the responses and helping to locate pertinent information quickly. The Responses are much better than the naive responses by Open AI."""
+
+with gr.Blocks() as demo:
+
+    gr.Markdown(f'<center><h1>{title}</h1></center>')
+    gr.Markdown(description)
+
+    with gr.Row():
+        
+        with gr.Group():
+            gr.Markdown(f'<p style="text-align:center">Get your Open AI API key <a href="https://platform.openai.com/account/api-keys">here</a></p>')
+            openAI_key=gr.Textbox(label='Enter your OpenAI API key here')
+            url = gr.Textbox(label='Enter PDF URL here')
+            gr.Markdown("<center><h4>OR<h4></center>")
+            file = gr.File(label='Upload your PDF/ Research Paper / Book here', file_types=['.pdf'])
+            question = gr.Textbox(label='Enter your question here')
+            btn = gr.Button(value='Submit')
+            btn.style(full_width=True)
+
+        with gr.Group():
+            answer = gr.Textbox(label='The answer to your question is :')
+
+        btn.click(question_answer, inputs=[url, file, question,openAI_key], outputs=[answer])
+#openai.api_key = os.getenv('Your_Key_Here') 
+demo.launch()
+
+
+# import streamlit as st
+
+# #Define the app layout
+# st.markdown(f'<center><h1>{title}</h1></center>', unsafe_allow_html=True)
+# st.markdown(description)
+
+# col1, col2 = st.columns(2)
+
+# # Define the inputs in the first column
+# with col1:
+#     url = st.text_input('URL')
+#     st.markdown("<center><h6>or<h6></center>", unsafe_allow_html=True)
+#     file = st.file_uploader('PDF', type='pdf')
+#     question = st.text_input('question')
+#     btn = st.button('Submit')
+
+# # Define the output in the second column
+# with col2:
+#     answer = st.text_input('answer')
+
+# # Define the button action
+# if btn:
+#     answer_value = question_answer(url, file, question)
+#     answer.value = answer_value

requirements.txt

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+PyMuPDF
+numpy==1.19.5
+scikit-learn
+tensorflow>=2.0.0
+tensorflow-hub
+openai==0.10.2