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Runtime error
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534753c
1
Parent(s):
bf93e44
Update app.py
Browse files
app.py
CHANGED
@@ -56,14 +56,6 @@ model = CLIPModel().to(device)
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model.load_state_dict(torch.load("weights.pt", map_location=torch.device('cpu')))
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text_embeddings = torch.load('saved_text_embeddings.pt', map_location=device)
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# Add this function to reset the session state
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def reset_session_state():
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st.session_state.caption = None
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st.session_state.report = None
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st.session_state.feedback = None
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st.session_state.regenerated_report = None
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# Add this function to reset the session state
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def reset_session_state():
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st.session_state.caption = None
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st.session_state.report = None
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@@ -79,8 +71,8 @@ def show_predicted_caption(image, top_k=8):
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matches = predict_caption(
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image, model, text_embeddings, testing_df["caption"]
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)[:top_k]
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cleaned_matches = [re.sub(r'\s\(ROCO_\d+\)', '', match) for match in matches]
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return cleaned_matches
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def generate_radiology_report(prompt):
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response = openai.Completion.create(
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@@ -92,11 +84,9 @@ def generate_radiology_report(prompt):
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temperature=1,
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)
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report = response.choices[0].text.strip()
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# Remove reference string from the report
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report = re.sub(r'\(ROCO_\d+\)', '', report).strip()
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return report
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def save_as_docx(text, filename):
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document = Document()
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document.add_paragraph(text)
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@@ -124,7 +114,6 @@ if uploaded_file is not None:
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st.image(image, caption="Uploaded Image", use_column_width=True)
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st.write("")
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# Replace the 'if st.button("Generate Caption"):' block with the following code
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if st.button("Generate Caption") or st.session_state.caption:
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if not st.session_state.caption:
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with st.spinner("Generating caption..."):
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@@ -133,26 +122,21 @@ if uploaded_file is not None:
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st.success(f"Caption: {st.session_state.caption}")
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# Generate the radiology report
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if not st.session_state.report:
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st.session_state.report = generate_radiology_report(f"Write Complete Radiology Report for this with clinical info, subjective, Assessment, Finding, Impressions, Conclusion and more in proper order : {st.session_state.caption}")
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# Add personal information to the radiology report
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radiology_report_with_personal_info = f"Patient Name: {first_name} {last_name}\nAge: {age}\nGender: {gender}\n\n{st.session_state.report}"
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st.header("Radiology Report")
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st.write(radiology_report_with_personal_info)
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st.markdown(download_link(save_as_docx(radiology_report_with_personal_info, "radiology_report.docx"), "radiology_report.docx", "Download Report as DOCX"), unsafe_allow_html=True)
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feedback_options = ["Satisfied", "Not Satisfied"]
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st.session_state.feedback = st.radio("Please provide feedback on the generated report:", feedback_options, key="feedback")
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feedback_options = ["Satisfied", "Not Satisfied"]
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if not 'feedback' in st.session_state:
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st.session_state.feedback = feedback_options[0]
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st.session_state.feedback = st.radio("Please provide feedback on the generated report:", feedback_options, key="feedback")
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if st.session_state.feedback == "Not Satisfied":
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if st.button("Regenerate Report") or st.session_state.regenerated_report:
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if not st.session_state.regenerated_report:
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@@ -164,4 +148,4 @@ if uploaded_file is not None:
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st.header("Regenerated Radiology Report")
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st.write(regenerated_radiology_report_with_personal_info)
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st.markdown(download_link(save_as_docx(regenerated_radiology_report_with_personal_info, "regenerated_radiology_report.docx"), "regenerated_radiology_report.docx", "Download Regenerated Report as DOCX"), unsafe_allow_html=True)
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model.load_state_dict(torch.load("weights.pt", map_location=torch.device('cpu')))
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text_embeddings = torch.load('saved_text_embeddings.pt', map_location=device)
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def reset_session_state():
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st.session_state.caption = None
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st.session_state.report = None
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matches = predict_caption(
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image, model, text_embeddings, testing_df["caption"]
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)[:top_k]
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cleaned_matches = [re.sub(r'\s\(ROCO_\d+\)', '', match) for match in matches]
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return cleaned_matches
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def generate_radiology_report(prompt):
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response = openai.Completion.create(
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temperature=1,
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)
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report = response.choices[0].text.strip()
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report = re.sub(r'\(ROCO_\d+\)', '', report).strip()
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return report
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def save_as_docx(text, filename):
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document = Document()
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document.add_paragraph(text)
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st.image(image, caption="Uploaded Image", use_column_width=True)
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st.write("")
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if st.button("Generate Caption") or st.session_state.caption:
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if not st.session_state.caption:
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with st.spinner("Generating caption..."):
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st.success(f"Caption: {st.session_state.caption}")
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if not st.session_state.report:
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st.session_state.report = generate_radiology_report(f"Write Complete Radiology Report for this with clinical info, subjective, Assessment, Finding, Impressions, Conclusion and more in proper order : {st.session_state.caption}")
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radiology_report_with_personal_info = f"Patient Name: {first_name} {last_name}\nAge: {age}\nGender: {gender}\n\n{st.session_state.report}"
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st.header("Radiology Report")
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st.write(radiology_report_with_personal_info)
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st.markdown(download_link(save_as_docx(radiology_report_with_personal_info, "radiology_report.docx"), "radiology_report.docx", "Download Report as DOCX"), unsafe_allow_html=True)
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feedback_options = ["Satisfied", "Not Satisfied"]
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if not 'feedback' in st.session_state:
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st.session_state.feedback = feedback_options[0]
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st.session_state.feedback = st.radio("Please provide feedback on the generated report:", feedback_options, key="feedback")
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if st.session_state.feedback == "Not Satisfied":
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if st.button("Regenerate Report") or st.session_state.regenerated_report:
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if not st.session_state.regenerated_report:
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st.header("Regenerated Radiology Report")
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st.write(regenerated_radiology_report_with_personal_info)
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st.markdown(download_link(save_as_docx(regenerated_radiology_report_with_personal_info, "regenerated_radiology_report.docx"), "regenerated_radiology_report.docx", "Download Regenerated Report as DOCX"), unsafe_allow_html=True)
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