fix paths

app.py

@@ -496,3 +496,5 @@ doi: https://doi.org/10.1101/2023.05.24.542194""")
     protpardelleDemo.load(None, None, None, _js=load_js)
 protpardelleDemo.queue()
 protpardelleDemo.launch(allowed_paths=['samples'])
+
+print("working directory", os.getcwd())

configs/allatom.yml

@@ -1,5 +1,5 @@
 train:
-    home_dir: '/home/duerr/phd/08_Code/protpardelle-final'
+    home_dir: '/home/user/app'
     seed: 0
     checkpoint: ['', 0]
     batch_size: 32

configs/backbone.yml

@@ -1,5 +1,5 @@
 train:
-    home_dir: '/scratch/users/alexechu'
+    home_dir: '/home/user/app'
     seed: 0
     checkpoint: ['', 0]
     batch_size: 32

configs/seqdes.yml

@@ -1,5 +1,5 @@
 train:
-    home_dir: '/scratch/users/alexechu'
+    home_dir: '/home/user/app'
     seed: 0
     checkpoint: ['', 0]
     batch_size: 32