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simonduerr
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Parent(s):
1891093
Update inference_app.py
Browse files- inference_app.py +7 -2
inference_app.py
CHANGED
@@ -1,5 +1,6 @@
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import time
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import gradio as gr
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@@ -12,9 +13,11 @@ def predict (input_seq_1, input_msa_1, input_protein_1, input_seq_2,input_msa_2,
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start_time = time.time()
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# Do inference here
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# return an output pdb file with the protein and two chains A and B.
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end_time = time.time()
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run_time = end_time - start_time
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return "test_out.pdb", run_time
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with gr.Blocks() as app:
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@@ -82,10 +85,12 @@ with gr.Blocks() as app:
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"color": "greenCarbon"
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}
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]
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out = Molecule3D(reps=reps)
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run_time = gr.Textbox(label="Runtime")
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btn.click(predict, inputs=[input_seq_1, input_msa_1, input_protein_1, input_seq_2, input_msa_2, input_protein_2], outputs=[out, run_time])
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app.launch()
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import time
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import json
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import gradio as gr
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start_time = time.time()
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# Do inference here
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# return an output pdb file with the protein and two chains A and B.
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# also return a JSON with any metrics you want to report
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metrics = {"mean_plddt": 80, "binding_affinity": 2}
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end_time = time.time()
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run_time = end_time - start_time
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return "test_out.pdb",json.dumps(metrics), run_time
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with gr.Blocks() as app:
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"color": "greenCarbon"
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}
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]
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# outputs
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out = Molecule3D(reps=reps)
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metrics = gr.JSON(label="Metrics")
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run_time = gr.Textbox(label="Runtime")
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btn.click(predict, inputs=[input_seq_1, input_msa_1, input_protein_1, input_seq_2, input_msa_2, input_protein_2], outputs=[out, metrics, run_time])
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app.launch()
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