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incorporate our data and our fields
Browse files
app.py
CHANGED
@@ -6,9 +6,41 @@ from crystal_toolkit.settings import SETTINGS
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import dash
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from dash import html, dcc
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from dash.dependencies import Input, Output, State
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#
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# Initialize the Dash app
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app = dash.Dash(__name__, assets_folder=SETTINGS.ASSETS_PATH)
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@@ -51,12 +83,15 @@ layout = html.Div([
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# Function to search for materials
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def search_materials(query):
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)
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return options
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@@ -86,26 +121,23 @@ def update_material_dropdown(n_clicks, query):
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def display_material(n_clicks, material_id):
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if n_clicks is None or not material_id:
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return '', ''
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# Create the StructureMoleculeComponent
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structure_component = ctc.StructureMoleculeComponent(
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# Extract key properties
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properties = {
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"Material ID":
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"Formula":
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"Energy
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"
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"
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"Formation Energy (eV/atom)": summary.formation_energy_per_atom,
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"Magnetic Ordering": summary.ordering,
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"Total Magnetization (μB/f.u.)": summary.total_magnetization,
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"Is Stable": summary.is_stable,
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"Crystal System": summary.symmetry.crystal_system,
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"Density (g/cm³)": summary.density,
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}
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# Format properties as an HTML table
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import dash
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from dash import html, dcc
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from dash.dependencies import Input, Output, State
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from pymatgen.core import Structure
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HF_TOKEN = os.environ.get("HF_TOKEN")
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# Load only the train split of the dataset
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dataset = load_dataset(
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"LeMaterial/leDataset",
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token=HF_TOKEN,
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split="train",
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columns=[
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"lattice_vectors",
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"species_at_sites",
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"cartesian_site_positions",
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"energy",
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"energy_corrected",
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"immutable_id",
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"elements",
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"functional",
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"stress_tensor",
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"magnetic_moments",
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"forces",
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"band_gap_direct",
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"band_gap_indirect",
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"dos_ef",
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"charges",
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"functional",
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"chemical_formula_reduced",
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"chemical_formula_descriptive",
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"total_magnetization"
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],
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)
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# Convert the train split to a pandas DataFrame
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train_df = dataset.to_pandas()
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del dataset
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# Initialize the Dash app
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app = dash.Dash(__name__, assets_folder=SETTINGS.ASSETS_PATH)
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# Function to search for materials
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def search_materials(query):
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element_list = [el.strip() for el in query.split("-")]
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isubset = lambda x: set(x).issubset(element_list)
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isintersection = lambda x: len(set(x).intersection(element_list)) > 0
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entries_df = train_df[
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[isintersection(l) and isubset(l) for l in train_df.elements.values.tolist()]
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]
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options = [{'label': f"{res.chemical_formula_reduced} ({res.immutable_id}) Calculated with {res.functional}", 'value': n} for n,res in entries_df.iterrows()]
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del entries_df
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return options
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def display_material(n_clicks, material_id):
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if n_clicks is None or not material_id:
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return '', ''
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row = train_df.iloc[material_id]
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structure = Structure([x for y in row['lattice_vectors'] for x in y],
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row['species_at_sites'],
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row['cartesian_site_positions'],
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coords_are_cartesian= True)
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# Create the StructureMoleculeComponent
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structure_component = ctc.StructureMoleculeComponent(structure)
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# Extract key properties
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properties = {
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"Material ID": row.immutable_id,
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"Formula": row.chemical_formula_descriptive,
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"Energy per atom (eV/atom)": row.energy/len(row.species_at_sites),
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"Band Gap (eV)": row.band_gap_direct or row.band_gap_indirect,
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"Total Magnetization (μB/f.u.)": row.total_magnetization,
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}
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# Format properties as an HTML table
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