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import math | |
import random | |
from typing import Callable, List, Union | |
from torch.utils.data.sampler import BatchSampler, Sampler, SubsetRandomSampler | |
class SubsetSampler(Sampler): | |
""" | |
Samples elements sequentially from a given list of indices. | |
Args: | |
indices (list): a sequence of indices | |
""" | |
def __init__(self, indices): | |
super().__init__(indices) | |
self.indices = indices | |
def __iter__(self): | |
return (self.indices[i] for i in range(len(self.indices))) | |
def __len__(self): | |
return len(self.indices) | |
class PerfectBatchSampler(Sampler): | |
""" | |
Samples a mini-batch of indices for a balanced class batching | |
Args: | |
dataset_items(list): dataset items to sample from. | |
classes (list): list of classes of dataset_items to sample from. | |
batch_size (int): total number of samples to be sampled in a mini-batch. | |
num_gpus (int): number of GPU in the data parallel mode. | |
shuffle (bool): if True, samples randomly, otherwise samples sequentially. | |
drop_last (bool): if True, drops last incomplete batch. | |
""" | |
def __init__( | |
self, | |
dataset_items, | |
classes, | |
batch_size, | |
num_classes_in_batch, | |
num_gpus=1, | |
shuffle=True, | |
drop_last=False, | |
label_key="class_name", | |
): | |
super().__init__(dataset_items) | |
assert ( | |
batch_size % (num_classes_in_batch * num_gpus) == 0 | |
), "Batch size must be divisible by number of classes times the number of data parallel devices (if enabled)." | |
label_indices = {} | |
for idx, item in enumerate(dataset_items): | |
label = item[label_key] | |
if label not in label_indices.keys(): | |
label_indices[label] = [idx] | |
else: | |
label_indices[label].append(idx) | |
if shuffle: | |
self._samplers = [SubsetRandomSampler(label_indices[key]) for key in classes] | |
else: | |
self._samplers = [SubsetSampler(label_indices[key]) for key in classes] | |
self._batch_size = batch_size | |
self._drop_last = drop_last | |
self._dp_devices = num_gpus | |
self._num_classes_in_batch = num_classes_in_batch | |
def __iter__(self): | |
batch = [] | |
if self._num_classes_in_batch != len(self._samplers): | |
valid_samplers_idx = random.sample(range(len(self._samplers)), self._num_classes_in_batch) | |
else: | |
valid_samplers_idx = None | |
iters = [iter(s) for s in self._samplers] | |
done = False | |
while True: | |
b = [] | |
for i, it in enumerate(iters): | |
if valid_samplers_idx is not None and i not in valid_samplers_idx: | |
continue | |
idx = next(it, None) | |
if idx is None: | |
done = True | |
break | |
b.append(idx) | |
if done: | |
break | |
batch += b | |
if len(batch) == self._batch_size: | |
yield batch | |
batch = [] | |
if valid_samplers_idx is not None: | |
valid_samplers_idx = random.sample(range(len(self._samplers)), self._num_classes_in_batch) | |
if not self._drop_last: | |
if len(batch) > 0: | |
groups = len(batch) // self._num_classes_in_batch | |
if groups % self._dp_devices == 0: | |
yield batch | |
else: | |
batch = batch[: (groups // self._dp_devices) * self._dp_devices * self._num_classes_in_batch] | |
if len(batch) > 0: | |
yield batch | |
def __len__(self): | |
class_batch_size = self._batch_size // self._num_classes_in_batch | |
return min(((len(s) + class_batch_size - 1) // class_batch_size) for s in self._samplers) | |
def identity(x): | |
return x | |
class SortedSampler(Sampler): | |
"""Samples elements sequentially, always in the same order. | |
Taken from https://github.com/PetrochukM/PyTorch-NLP | |
Args: | |
data (iterable): Iterable data. | |
sort_key (callable): Specifies a function of one argument that is used to extract a | |
numerical comparison key from each list element. | |
Example: | |
>>> list(SortedSampler(range(10), sort_key=lambda i: -i)) | |
[9, 8, 7, 6, 5, 4, 3, 2, 1, 0] | |
""" | |
def __init__(self, data, sort_key: Callable = identity): | |
super().__init__(data) | |
self.data = data | |
self.sort_key = sort_key | |
zip_ = [(i, self.sort_key(row)) for i, row in enumerate(self.data)] | |
zip_ = sorted(zip_, key=lambda r: r[1]) | |
self.sorted_indexes = [item[0] for item in zip_] | |
def __iter__(self): | |
return iter(self.sorted_indexes) | |
def __len__(self): | |
return len(self.data) | |
class BucketBatchSampler(BatchSampler): | |
"""Bucket batch sampler | |
Adapted from https://github.com/PetrochukM/PyTorch-NLP | |
Args: | |
sampler (torch.data.utils.sampler.Sampler): | |
batch_size (int): Size of mini-batch. | |
drop_last (bool): If `True` the sampler will drop the last batch if its size would be less | |
than `batch_size`. | |
data (list): List of data samples. | |
sort_key (callable, optional): Callable to specify a comparison key for sorting. | |
bucket_size_multiplier (int, optional): Buckets are of size | |
`batch_size * bucket_size_multiplier`. | |
Example: | |
>>> sampler = WeightedRandomSampler(weights, len(weights)) | |
>>> sampler = BucketBatchSampler(sampler, data=data_items, batch_size=32, drop_last=True) | |
""" | |
def __init__( | |
self, | |
sampler, | |
data, | |
batch_size, | |
drop_last, | |
sort_key: Union[Callable, List] = identity, | |
bucket_size_multiplier=100, | |
): | |
super().__init__(sampler, batch_size, drop_last) | |
self.data = data | |
self.sort_key = sort_key | |
_bucket_size = batch_size * bucket_size_multiplier | |
if hasattr(sampler, "__len__"): | |
_bucket_size = min(_bucket_size, len(sampler)) | |
self.bucket_sampler = BatchSampler(sampler, _bucket_size, False) | |
def __iter__(self): | |
for idxs in self.bucket_sampler: | |
bucket_data = [self.data[idx] for idx in idxs] | |
sorted_sampler = SortedSampler(bucket_data, self.sort_key) | |
for batch_idx in SubsetRandomSampler(list(BatchSampler(sorted_sampler, self.batch_size, self.drop_last))): | |
sorted_idxs = [idxs[i] for i in batch_idx] | |
yield sorted_idxs | |
def __len__(self): | |
if self.drop_last: | |
return len(self.sampler) // self.batch_size | |
return math.ceil(len(self.sampler) / self.batch_size) | |