fadliaulawi commited on
Commit
fae7a09
1 Parent(s): a937ee2

Fix bug SNP with ts

Browse files
Files changed (1) hide show
  1. process.py +1 -1
process.py CHANGED
@@ -206,7 +206,7 @@ def validate(df):
206
  if re.fullmatch('rs(\d)+|', snp):
207
  pass
208
  elif re.fullmatch('ts(\d)+', snp):
209
- snp = 't' + snp[1:]
210
  elif re.fullmatch('s(\d)+', snp):
211
  snp = 'r' + snp
212
  elif re.fullmatch('(\d)+', snp):
 
206
  if re.fullmatch('rs(\d)+|', snp):
207
  pass
208
  elif re.fullmatch('ts(\d)+', snp):
209
+ snp = 'r' + snp[1:]
210
  elif re.fullmatch('s(\d)+', snp):
211
  snp = 'r' + snp
212
  elif re.fullmatch('(\d)+', snp):