Spaces:
Running
Running
JunchuanYu
commited on
Commit
•
3381189
1
Parent(s):
ee39664
Upload run.py
Browse files
run.py
ADDED
@@ -0,0 +1,147 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
import os,glob,h5py,time
|
2 |
+
import gradio as gr
|
3 |
+
from PIL import Image
|
4 |
+
import numpy as np
|
5 |
+
from osgeo import gdal
|
6 |
+
from matplotlib import pyplot as plt
|
7 |
+
from tqdm import tqdm
|
8 |
+
|
9 |
+
title=(""" # <p align="center"> Remote Sensing Tile Dataset Creator 🛰️ <b>
|
10 |
+
### <p align="center"> yujunchuan (yujunchuna@mail.cgs.gov.cn)<b>""")
|
11 |
+
|
12 |
+
with gr.Blocks(theme=gr.themes.Soft(),css="footer {visibility: hidden}") as demo:
|
13 |
+
# dtype=gr.State(value=[])
|
14 |
+
fullarray=gr.State(value=None)
|
15 |
+
cropdata=gr.State(value=None)
|
16 |
+
boriginal_img=gr.State(value=None)
|
17 |
+
boriginal_lab=gr.State(value=None)
|
18 |
+
gr.Markdown(title)
|
19 |
+
|
20 |
+
|
21 |
+
with gr.Tab("Basic Mode"):
|
22 |
+
|
23 |
+
with gr.Row():
|
24 |
+
with gr.Column(scale=50):
|
25 |
+
# input_img=gr.Textbox(label='Input image path' )
|
26 |
+
# input_lab=gr.Textbox(label='Input mask path')
|
27 |
+
input_img=gr.File(label='Input image path',height=100,scale=2)
|
28 |
+
outpath=gr.Textbox(label='Output path',lines=2)
|
29 |
+
with gr.Column(scale=50):
|
30 |
+
with gr.Row():
|
31 |
+
datatype=gr.Radio(['Tiff','Hdf5'],interactive=True, type="value",value='Tiff',label='Data type')
|
32 |
+
with gr.Row():
|
33 |
+
# with gr.Column():
|
34 |
+
check_button = gr.Button("Check file")
|
35 |
+
with gr.Row():
|
36 |
+
# with gr.Column():
|
37 |
+
result=gr.Textbox(label='Logging info',lines=2,show_label=True)
|
38 |
+
|
39 |
+
with gr.Row(equal_height=True):
|
40 |
+
with gr.Column():
|
41 |
+
with gr.Row(equal_height=True):
|
42 |
+
with gr.Column(scale=50):
|
43 |
+
with gr.Row():
|
44 |
+
with gr.Column(scale=50):
|
45 |
+
clipmode=gr.Radio(['Sequential','Random'],interactive=True, type="value",value='Sequential',label='Clip mode')
|
46 |
+
with gr.Column(scale=50):
|
47 |
+
npatch=gr.Number(label="N patches",value=50,precision=0,interactive=True)
|
48 |
+
with gr.Row():
|
49 |
+
thresh = gr.Slider(minimum=0, maximum=1, value=0, step=0.1, interactive=True, label="threshhold")
|
50 |
+
with gr.Column(scale=50):
|
51 |
+
with gr.Row(equal_height=True):
|
52 |
+
with gr.Column(scale=50):
|
53 |
+
cropsize = gr.Number(label="Crop size",value=256,precision=0,interactive=True)
|
54 |
+
run_button = gr.Button("Start",size='lg',scale=2,variant="primary")
|
55 |
+
with gr.Column(scale=50):
|
56 |
+
stride = gr.Number(label="Stride",value=256,precision=0,interactive=True)
|
57 |
+
# with gr.Row(equal_height=True):
|
58 |
+
save_button = gr.Button("Save",size='lg',scale=2,variant="primary")
|
59 |
+
|
60 |
+
with gr.Row(equal_height=True):
|
61 |
+
with gr.Column(scale=50):
|
62 |
+
original_img=gr.Image(label='Input image')
|
63 |
+
with gr.Column(scale=50):
|
64 |
+
original_lab=gr.Image(label='Input mask')
|
65 |
+
with gr.Column(scale=100):
|
66 |
+
show_pathes=gr.Image(label='Image tile')
|
67 |
+
with gr.Row(equal_height=True):
|
68 |
+
with gr.Column(scale=1):
|
69 |
+
start=gr.Number(label='Start number',value=0,precision=0,interactive=True)
|
70 |
+
with gr.Column(scale=1):
|
71 |
+
dstride=gr.Number(label='Show N files',value=10,precision=0,interactive=True)
|
72 |
+
with gr.Column(scale=2):
|
73 |
+
showtile=gr.Button('Show tile',size='lg',variant="primary")
|
74 |
+
tilecheck=gr.Button('Next tile',size='lg',variant="secondary")
|
75 |
+
|
76 |
+
with gr.Row():
|
77 |
+
example = gr.Examples(
|
78 |
+
examples=[['./image/128_d4_32.tif','Tiff']],
|
79 |
+
fn=read_img_file,
|
80 |
+
inputs=[input_img,datatype],
|
81 |
+
outputs=[fullarray,original_img,original_lab],
|
82 |
+
cache_examples=False)
|
83 |
+
## BATCH MODE
|
84 |
+
with gr.Tab("Batch"):
|
85 |
+
with gr.Row(equal_height=True):
|
86 |
+
with gr.Column(scale=50):
|
87 |
+
binput_img=gr.File(label='Input image path',height=100,scale=3,file_count='multiple')
|
88 |
+
# with gr.Row():
|
89 |
+
with gr.Column(scale=50):
|
90 |
+
with gr.Row():
|
91 |
+
with gr.Column():
|
92 |
+
bdatatype=gr.Radio(['Tiff','Hdf5'],interactive=True, type="value",value='Tiff',label='Data type')
|
93 |
+
with gr.Column(scale=20):
|
94 |
+
boutpath=gr.Textbox(label='Output path',lines=1)
|
95 |
+
with gr.Row():
|
96 |
+
bcheck_button = gr.Button("Check file")
|
97 |
+
# with gr.Row():
|
98 |
+
|
99 |
+
with gr.Row(equal_height=True):
|
100 |
+
with gr.Column():
|
101 |
+
with gr.Row(equal_height=True):
|
102 |
+
with gr.Column(scale=50):
|
103 |
+
with gr.Row():
|
104 |
+
with gr.Column(scale=50):
|
105 |
+
bclipmode=gr.Radio(['Sequential','Random'],interactive=True, type="value",value='Sequential',label='Clip mode')
|
106 |
+
with gr.Column(scale=50):
|
107 |
+
bnpatch=gr.Number(label="N patches",value=50,precision=0,interactive=True)
|
108 |
+
with gr.Row():
|
109 |
+
bthresh = gr.Slider(minimum=0, maximum=1, value=0, step=0.1, interactive=True, label="threshhold")
|
110 |
+
|
111 |
+
with gr.Column(scale=50):
|
112 |
+
with gr.Row():
|
113 |
+
with gr.Column(scale=50):
|
114 |
+
bcropsize = gr.Number(label="Crop size",value=256,precision=0,interactive=True)
|
115 |
+
with gr.Column(scale=50):
|
116 |
+
bstride = gr.Number(label="Stride",value=256,precision=0,interactive=True)
|
117 |
+
with gr.Row():
|
118 |
+
brun_button = gr.Button("Start",size='lg',scale=2,variant="primary")
|
119 |
+
|
120 |
+
with gr.Row():
|
121 |
+
with gr.Column(scale=50):
|
122 |
+
boriginal_img=gr.Image(label='Input image')
|
123 |
+
with gr.Column(scale=50):
|
124 |
+
boriginal_lab=gr.Image(label='Input mask')
|
125 |
+
with gr.Column(scale=100):
|
126 |
+
bresult=gr.Textbox(label='Logging info',lines=8,show_label=True)
|
127 |
+
|
128 |
+
with gr.Row():
|
129 |
+
example = gr.Examples(
|
130 |
+
examples=[[glob.glob('./image/*.tif'),'Tiff','./image']],
|
131 |
+
fn=batch_check_file,
|
132 |
+
inputs=[binput_img,bdatatype,boutpath],
|
133 |
+
outputs=[bresult],
|
134 |
+
cache_examples=False)
|
135 |
+
|
136 |
+
input_img.change(read_img_file,[input_img,datatype],[fullarray,original_img,original_lab])
|
137 |
+
check_button.click(check_file,[fullarray,outpath],result)
|
138 |
+
run_button.click(data_crop,[fullarray,cropsize,stride,clipmode,npatch,thresh],[cropdata,result])
|
139 |
+
save_button.click(save_tile,[cropdata,outpath],result)
|
140 |
+
showtile.click(show_data,cropdata,[show_pathes,start])
|
141 |
+
tilecheck.click(show_data,[cropdata,start,dstride],[show_pathes,start])
|
142 |
+
|
143 |
+
bcheck_button.click(batch_check_file,[binput_img,bdatatype,boutpath],bresult)
|
144 |
+
brun_button.click(batch_clip_data,[binput_img,bdatatype,bcropsize,bstride,bclipmode,npatch,bthresh,boutpath],[boriginal_img,boriginal_lab,bresult],show_progress=True)
|
145 |
+
|
146 |
+
demo.queue()
|
147 |
+
demo.launch(debug=True,show_api=False,show_tips=False)
|