Hack90 commited on
Commit
7f7d36e
1 Parent(s): d1f4671

Update utils.py

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Files changed (1) hide show
  1. utils.py +2 -2
utils.py CHANGED
@@ -374,7 +374,7 @@ def create_groups_subs(closest_matches):
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  return groups
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- def process_data_sub_specie(df, species):
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  """Process DNA data for a given species."""
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  # Filter data for the given species
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  df_plot = df[df['organism_name'] == species].reset_index(drop=True).copy()
@@ -399,7 +399,7 @@ def process_data_sub_specie(df, species):
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  bbbb = np.array(b_list)
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  print(bbbb)
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  np.fill_diagonal(bbbb, 10000)
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- median_filter = median * 3
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  maxxx = [np.where(bbbb[i] < median_filter)[0] for i in range(len(bbbb))]
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  # Create groups
 
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  return groups
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+ def process_data_sub_specie(df, species, varience):
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  """Process DNA data for a given species."""
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  # Filter data for the given species
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  df_plot = df[df['organism_name'] == species].reset_index(drop=True).copy()
 
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  bbbb = np.array(b_list)
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  print(bbbb)
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  np.fill_diagonal(bbbb, 10000)
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+ median_filter = median * varience
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  maxxx = [np.where(bbbb[i] < median_filter)[0] for i in range(len(bbbb))]
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  # Create groups