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Running
Updating family_results.csv
Browse files- family_results.csv +2 -1
family_results.csv
CHANGED
@@ -9,4 +9,5 @@ GENE2VEC,0.4921167791459459,0.4911711232747838,0.442840908521379,0.5302170286165
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TCGA-EMBEDDING,0.4816481578742707,0.4808127219142234,0.43552920372157,0.4324169731021579,0.5177795068982821,0.4811228502828237,0.5404820217169857,0.4854285715933477,0.4885163691788489,0.4869191394241813,0.46524064171123,0.4577181208053691,0.4166666666666667,0.408355795148248,0.4993178717598908,0.4806408544726301,0.527027027027027,0.4587280108254398,0.4871794871794871,0.4577181208053691,0.2286968580619686,0.2601353434482007,0.2303129674213582,0.2363119491684308,0.2635557621961782,0.2396275659502585,0.2953728434963636,0.2212758562351006,0.2388531251398702,0.2619123553866644,0.5179360844144525,0.5010154795099835,0.3867224690820816,0.4906671095660554,0.3715131578498087,0.478951272667216,0.5112496675291254,0.4887682683271611,0.4977715003414401,0.5042957966850216,0.5280748663101604,0.4832214765100671,0.3817204301075269,0.4703504043126684,0.3506139154160982,0.4512683578104139,0.4986486486486486,0.4614343707713126,0.4844804318488529,0.4805369127516778,0.2517130274911934,0.2617848501866382,0.2085862813211724,0.2502111803301788,0.2112698877893442,0.2461173469604984,0.2772452982636768,0.2405989099239982,0.2432239816880598,0.2527651223441314,0.47646371416941,0.5085934382407308,0.4451726856880728,0.4644055254664764,0.5184127552298581,0.521442845682385,0.437254896868555,0.4852926658620127,0.4898587239490579,0.5010462085820022,0.4451871657754011,0.4885906040268456,0.4193548387096774,0.4501347708894879,0.5266030013642565,0.5046728971962616,0.4162162162162162,0.456021650879567,0.4750337381916329,0.4859060402684563,0.237415689088743,0.2786070332018291,0.239146673130236,0.2406681821408777,0.2673935384068321,0.2696342242118523,0.2488946604886648,0.2352555136447007,0.2301510303536447,0.2462447180257804,0.4794543797701664,0.4232494738205696,0.4850823375195657,0.4645961232803158,0.3808684429835929,0.4541563611190023,0.5059291262217156,0.5183898751928784,0.3670337673410934,0.4508692547818999,0.4893048128342246,0.4053691275167785,0.4811827956989247,0.4501347708894879,0.3356070941336971,0.4245660881174899,0.4959459459459459,0.5128552097428958,0.321187584345479,0.425503355704698,0.2216484285607611,0.184078568526175,0.2165368225991113,0.2358236229421344,0.1443353101743842,0.1966312339178509,0.2424860379231255,0.2308174236968389,0.1216626247679994,0.1907291379105412
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PFAM,0.9023363590977108,0.939402974495418,0.922519630964391,0.9261215722045468,0.9231572232430884,0.9158411896662872,0.9160363549105096,0.9175623511131872,0.9148236237014804,0.915605660125817,0.906578947368421,0.9407894736842104,0.925,0.9289473684210526,0.9263157894736842,0.9223684210526316,0.9197368421052632,0.9210526315789472,0.9210526315789472,0.9210526315789472,0.8456261564919587,0.9061110854329156,0.8760749683616543,0.8845651315199907,0.8805476772991526,0.8770698795818221,0.866578953607524,0.8661081232797727,0.8732716117811117,0.8738010272200925,0.9019198478997112,0.9303443215842196,0.921285794237023,0.9291947972557448,0.9200001355214578,0.9129369765184888,0.9144691982246838,0.9067158029173132,0.9058841213886238,0.9123325564515498,0.906578947368421,0.9328947368421052,0.9236842105263158,0.9315789473684212,0.9236842105263158,0.9197368421052632,0.9184210526315788,0.911842105263158,0.913157894736842,0.9184210526315788,0.8456636843082973,0.8936193970378093,0.8738277283175342,0.888891796190474,0.8763192812346792,0.8727037469125691,0.8643920704337783,0.8505849888457293,0.8605596897789758,0.8697992926504299,0.9032074600621786,0.9352857076274396,0.9163616338149082,0.9273463025952084,0.9220893728223252,0.9162678008814628,0.912068769138675,0.9086997815844684,0.9087160317752424,0.915974258372718,0.906578947368421,0.936842105263158,0.9197368421052632,0.9302631578947368,0.925,0.9223684210526316,0.9157894736842104,0.911842105263158,0.9144736842105264,0.9210526315789472,0.8455424756064035,0.8998212440602317,0.8678609233209615,0.8867263517552867,0.8783307128463217,0.8766810641443967,0.8597561627562716,0.8505811055210875,0.8618925947394132,0.8735628975928117,0.8721865457109066,0.8702459288466918,0.7494578831075022,0.8842235965840995,0.8631049030841518,0.8732181441498759,0.8650854942842877,0.7958896615361718,0.8533634299481123,0.805566481017233,0.8789473684210526,0.8763157894736842,0.7105263157894737,0.8934210526315789,0.8710526315789474,0.8868421052631579,0.8776315789473684,0.8131578947368421,0.8657894736842106,0.8197368421052632,0.7979127190796615,0.8014150313493293,0.6261300707101483,0.8256736644883115,0.7873949964651665,0.8200373701629834,0.7960499693502245,0.6706743723984571,0.78099143619247,0.7033677712093329
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CPC-PROT,0.7082535684530981,0.7688240510166273,0.7084753714874844,0.7189775180588438,0.7660215073015073,0.7168936626706657,0.7524756742406031,0.6732940234328709,0.6920490297477548,0.7285645873490343,0.6805929919137467,0.7553763440860215,0.6751336898395722,0.7046070460704607,0.76,0.7332439678284183,0.7366310160427807,0.6414342629482072,0.6613545816733067,0.7687165775401069,0.5548350785195949,0.6387987051616691,0.5539169360949447,0.590556129410376,0.6278357026527832,0.6002159577610121,0.5956735608646982,0.5200501722768692,0.5472810930169619,0.6230380998006326,0.6939847750470188,0.7289953269902971,0.7357340667577342,0.7758335641717232,0.7671043227431442,0.6336926420045076,0.6878090928205091,0.6460582376220907,0.691432047266941,0.7496412404931395,0.6644204851752021,0.7043010752688172,0.7219251336898396,0.7737127371273713,0.7653333333333333,0.6179624664879356,0.6671122994652406,0.6148738379814077,0.6706507304116865,0.7593582887700535,0.5258434461531866,0.5862195339821108,0.582206439379967,0.6599309732231983,0.6349159734957205,0.5066176933298738,0.5493967808959722,0.502961351578401,0.5476007599253131,0.6203765354179901,0.7215868467285715,0.7786175110130976,0.766300436977754,0.7824810829264481,0.7102537311212409,0.7555207221706635,0.7614093117578571,0.7121293912675807,0.6786690043999806,0.76568706833869,0.7102425876010782,0.7728494623655914,0.7593582887700535,0.7899728997289973,0.688,0.7546916890080428,0.7580213903743316,0.6932270916334662,0.6600265604249668,0.7647058823529411,0.5746731026344988,0.6472568289441236,0.6269593954171394,0.6736283869038563,0.5594650055424583,0.6206672085921789,0.6213761276645129,0.5571176624388319,0.5435213267895703,0.6335183255577123,0.7412755395536784,0.7303189503974107,0.6903001294315152,0.6607537980880607,0.7184383242308505,0.7415646084894141,0.7217779634403676,0.7375448520169702,0.683931895471227,0.7326799993111769,0.7520215633423181,0.7258064516129032,0.660427807486631,0.6436314363143631,0.7066666666666667,0.7640750670241286,0.7152406417112299,0.7450199203187251,0.6427622841965471,0.7459893048128342,0.5870224996717051,0.5953604868616736,0.5082371677796159,0.5374960363030319,0.5779936507069865,0.6187220794734309,0.5691783801540423,0.5828172002702527,0.5020314642776607,0.5971782167652482
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ESM1B,0.933631469556359,0.9600768938998946,0.9080210788613654,0.
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TCGA-EMBEDDING,0.4816481578742707,0.4808127219142234,0.43552920372157,0.4324169731021579,0.5177795068982821,0.4811228502828237,0.5404820217169857,0.4854285715933477,0.4885163691788489,0.4869191394241813,0.46524064171123,0.4577181208053691,0.4166666666666667,0.408355795148248,0.4993178717598908,0.4806408544726301,0.527027027027027,0.4587280108254398,0.4871794871794871,0.4577181208053691,0.2286968580619686,0.2601353434482007,0.2303129674213582,0.2363119491684308,0.2635557621961782,0.2396275659502585,0.2953728434963636,0.2212758562351006,0.2388531251398702,0.2619123553866644,0.5179360844144525,0.5010154795099835,0.3867224690820816,0.4906671095660554,0.3715131578498087,0.478951272667216,0.5112496675291254,0.4887682683271611,0.4977715003414401,0.5042957966850216,0.5280748663101604,0.4832214765100671,0.3817204301075269,0.4703504043126684,0.3506139154160982,0.4512683578104139,0.4986486486486486,0.4614343707713126,0.4844804318488529,0.4805369127516778,0.2517130274911934,0.2617848501866382,0.2085862813211724,0.2502111803301788,0.2112698877893442,0.2461173469604984,0.2772452982636768,0.2405989099239982,0.2432239816880598,0.2527651223441314,0.47646371416941,0.5085934382407308,0.4451726856880728,0.4644055254664764,0.5184127552298581,0.521442845682385,0.437254896868555,0.4852926658620127,0.4898587239490579,0.5010462085820022,0.4451871657754011,0.4885906040268456,0.4193548387096774,0.4501347708894879,0.5266030013642565,0.5046728971962616,0.4162162162162162,0.456021650879567,0.4750337381916329,0.4859060402684563,0.237415689088743,0.2786070332018291,0.239146673130236,0.2406681821408777,0.2673935384068321,0.2696342242118523,0.2488946604886648,0.2352555136447007,0.2301510303536447,0.2462447180257804,0.4794543797701664,0.4232494738205696,0.4850823375195657,0.4645961232803158,0.3808684429835929,0.4541563611190023,0.5059291262217156,0.5183898751928784,0.3670337673410934,0.4508692547818999,0.4893048128342246,0.4053691275167785,0.4811827956989247,0.4501347708894879,0.3356070941336971,0.4245660881174899,0.4959459459459459,0.5128552097428958,0.321187584345479,0.425503355704698,0.2216484285607611,0.184078568526175,0.2165368225991113,0.2358236229421344,0.1443353101743842,0.1966312339178509,0.2424860379231255,0.2308174236968389,0.1216626247679994,0.1907291379105412
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PFAM,0.9023363590977108,0.939402974495418,0.922519630964391,0.9261215722045468,0.9231572232430884,0.9158411896662872,0.9160363549105096,0.9175623511131872,0.9148236237014804,0.915605660125817,0.906578947368421,0.9407894736842104,0.925,0.9289473684210526,0.9263157894736842,0.9223684210526316,0.9197368421052632,0.9210526315789472,0.9210526315789472,0.9210526315789472,0.8456261564919587,0.9061110854329156,0.8760749683616543,0.8845651315199907,0.8805476772991526,0.8770698795818221,0.866578953607524,0.8661081232797727,0.8732716117811117,0.8738010272200925,0.9019198478997112,0.9303443215842196,0.921285794237023,0.9291947972557448,0.9200001355214578,0.9129369765184888,0.9144691982246838,0.9067158029173132,0.9058841213886238,0.9123325564515498,0.906578947368421,0.9328947368421052,0.9236842105263158,0.9315789473684212,0.9236842105263158,0.9197368421052632,0.9184210526315788,0.911842105263158,0.913157894736842,0.9184210526315788,0.8456636843082973,0.8936193970378093,0.8738277283175342,0.888891796190474,0.8763192812346792,0.8727037469125691,0.8643920704337783,0.8505849888457293,0.8605596897789758,0.8697992926504299,0.9032074600621786,0.9352857076274396,0.9163616338149082,0.9273463025952084,0.9220893728223252,0.9162678008814628,0.912068769138675,0.9086997815844684,0.9087160317752424,0.915974258372718,0.906578947368421,0.936842105263158,0.9197368421052632,0.9302631578947368,0.925,0.9223684210526316,0.9157894736842104,0.911842105263158,0.9144736842105264,0.9210526315789472,0.8455424756064035,0.8998212440602317,0.8678609233209615,0.8867263517552867,0.8783307128463217,0.8766810641443967,0.8597561627562716,0.8505811055210875,0.8618925947394132,0.8735628975928117,0.8721865457109066,0.8702459288466918,0.7494578831075022,0.8842235965840995,0.8631049030841518,0.8732181441498759,0.8650854942842877,0.7958896615361718,0.8533634299481123,0.805566481017233,0.8789473684210526,0.8763157894736842,0.7105263157894737,0.8934210526315789,0.8710526315789474,0.8868421052631579,0.8776315789473684,0.8131578947368421,0.8657894736842106,0.8197368421052632,0.7979127190796615,0.8014150313493293,0.6261300707101483,0.8256736644883115,0.7873949964651665,0.8200373701629834,0.7960499693502245,0.6706743723984571,0.78099143619247,0.7033677712093329
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CPC-PROT,0.7082535684530981,0.7688240510166273,0.7084753714874844,0.7189775180588438,0.7660215073015073,0.7168936626706657,0.7524756742406031,0.6732940234328709,0.6920490297477548,0.7285645873490343,0.6805929919137467,0.7553763440860215,0.6751336898395722,0.7046070460704607,0.76,0.7332439678284183,0.7366310160427807,0.6414342629482072,0.6613545816733067,0.7687165775401069,0.5548350785195949,0.6387987051616691,0.5539169360949447,0.590556129410376,0.6278357026527832,0.6002159577610121,0.5956735608646982,0.5200501722768692,0.5472810930169619,0.6230380998006326,0.6939847750470188,0.7289953269902971,0.7357340667577342,0.7758335641717232,0.7671043227431442,0.6336926420045076,0.6878090928205091,0.6460582376220907,0.691432047266941,0.7496412404931395,0.6644204851752021,0.7043010752688172,0.7219251336898396,0.7737127371273713,0.7653333333333333,0.6179624664879356,0.6671122994652406,0.6148738379814077,0.6706507304116865,0.7593582887700535,0.5258434461531866,0.5862195339821108,0.582206439379967,0.6599309732231983,0.6349159734957205,0.5066176933298738,0.5493967808959722,0.502961351578401,0.5476007599253131,0.6203765354179901,0.7215868467285715,0.7786175110130976,0.766300436977754,0.7824810829264481,0.7102537311212409,0.7555207221706635,0.7614093117578571,0.7121293912675807,0.6786690043999806,0.76568706833869,0.7102425876010782,0.7728494623655914,0.7593582887700535,0.7899728997289973,0.688,0.7546916890080428,0.7580213903743316,0.6932270916334662,0.6600265604249668,0.7647058823529411,0.5746731026344988,0.6472568289441236,0.6269593954171394,0.6736283869038563,0.5594650055424583,0.6206672085921789,0.6213761276645129,0.5571176624388319,0.5435213267895703,0.6335183255577123,0.7412755395536784,0.7303189503974107,0.6903001294315152,0.6607537980880607,0.7184383242308505,0.7415646084894141,0.7217779634403676,0.7375448520169702,0.683931895471227,0.7326799993111769,0.7520215633423181,0.7258064516129032,0.660427807486631,0.6436314363143631,0.7066666666666667,0.7640750670241286,0.7152406417112299,0.7450199203187251,0.6427622841965471,0.7459893048128342,0.5870224996717051,0.5953604868616736,0.5082371677796159,0.5374960363030319,0.5779936507069865,0.6187220794734309,0.5691783801540423,0.5828172002702527,0.5020314642776607,0.5971782167652482
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12 |
+
ESM1B,0.933631469556359,0.9600768938998946,0.9080210788613654,0.9375791956131811,0.9511599950175716,0.9111734735243412,0.9416432062999448,0.9125658158076828,0.945647361921182,0.93440606965358,0.9339622641509434,0.961021505376344,0.9024064171122996,0.9363143631436316,0.9506666666666668,0.9048257372654156,0.9425133689839572,0.9083665338645418,0.9442231075697212,0.9371657754010696,0.891436587090678,0.9389741243716484,0.8560545175581632,0.9006166252019523,0.9213254722617537,0.8611025123558189,0.905667369998734,0.863544251116213,0.9122708308535424,0.8996448493674425,0.939611389871183,0.9318516758560956,0.9464073105523044,0.9217716424855524,0.9323298726315324,0.9496747517290034,0.9430487872606598,0.9473403419970838,0.9066677326495984,0.940221435736971,0.9393530997304582,0.9260752688172044,0.946524064171123,0.9159891598915988,0.9293333333333332,0.950402144772118,0.9438502673796793,0.9482071713147412,0.899070385126162,0.9398395721925134,0.9006584851425257,0.8935657435715886,0.9134797312459196,0.8750520274898942,0.8910867596918025,0.9205258675517348,0.9079184259243251,0.9132235137241054,0.8452863039981181,0.9045197735378644,0.9347110472873994,0.9586553038819992,0.9395743332533673,0.7441402968057809,0.9170412866553757,0.9417995630137682,0.8287568851417471,0.9553961008383252,0.9012819011118092,0.8570712608637906,0.9339622641509434,0.9583333333333334,0.9371657754010696,0.7140921409214093,0.9213333333333332,0.9436997319034852,0.7941176470588235,0.9548472775564408,0.8884462151394422,0.8181818181818182,0.8921212248958682,0.9350483942162552,0.900782642083502,0.6840293828269205,0.873134858971092,0.9099047652906386,0.7138432855154161,0.9251569367608748,0.8322589705814488,0.7564129571345682,0.906427896169995,0.9345812306252468,0.9180540227416444,0.929238233180962,0.9019476432730018,0.9235253114440034,0.9136544207298876,0.9120106218788604,0.9011902129138072,0.9107654984776395,0.908355795148248,0.9341397849462364,0.9171122994652406,0.929539295392954,0.8986666666666666,0.9222520107238604,0.9131016042780749,0.9083665338645418,0.903054448871182,0.9144385026737968,0.8487621331467847,0.8966606349355131,0.865482295870888,0.8856912048838793,0.8421859171502567,0.8776220420721631,0.8588421052792795,0.8535745736162391,0.8449358791114798,0.8621075328074009
|
13 |
+
BERT-BFD,0.8504041305270115,0.8917967536598276,0.8779801970959836,0.8870818736740941,0.8845717131709258,0.8944678248729618,0.8727760570691984,0.8855131198037655,0.877072140779296,0.868468062459638,0.8436657681940701,0.8870967741935484,0.8716577540106952,0.8821138211382114,0.8826666666666667,0.8927613941018767,0.8676470588235294,0.8831341301460823,0.8751660026560425,0.8622994652406417,0.764534247240924,0.8293270089639267,0.8085348855561603,0.8232681333350785,0.814603286884178,0.8324525983383937,0.7924841584730162,0.8123386576216483,0.8047692889329876,0.7934410303732048,0.8414295201820772,0.8919283831694059,0.8849184300368286,0.8859282067921875,0.8582386331384108,0.8823988836977765,0.8731772250209052,0.888827866434581,0.8801675792251846,0.8753771414615872,0.8288409703504043,0.8897849462365591,0.8810160427807486,0.8821138211382114,0.848,0.8780160857908847,0.8703208556149733,0.8884462151394422,0.8791500664010624,0.8756684491978609,0.7500093472676481,0.831559004332997,0.8206390557321637,0.822262294072336,0.7767424263536964,0.8173621236124974,0.7986094261848556,0.8153653621863455,0.8101556319604669,0.8037385519346604,0.8654626341678262,0.8779818851867557,0.9126611487896076,0.8890216726416631,0.8792964947527093,0.8850929437888375,0.8680573812353197,0.8781005777480876,0.8658283677471644,0.8835870870729962,0.8611859838274932,0.8669354838709677,0.9117647058823529,0.8875338753387534,0.876,0.886058981233244,0.8636363636363636,0.8711819389110226,0.8605577689243028,0.8823529411764706,0.7860182465745271,0.8089835642351408,0.85830411145131,0.8272002663853223,0.8055314326570069,0.8195825975851925,0.7882288304476232,0.8054862165879205,0.7855955034095703,0.815638209412358,0.7880426926538437,0.8685275529102569,0.8583237028689982,0.886620067699476,0.8590969067335169,0.8736670593838202,0.8494821857723751,0.8700019414704976,0.8645978532511275,0.8430076193724833,0.7668463611859838,0.8575268817204301,0.8516042780748663,0.8834688346883469,0.8546666666666667,0.8672922252010724,0.8435828877005348,0.8685258964143426,0.8618857901726428,0.8355614973262032,0.6768854513559635,0.7957408916866008,0.7756920526142603,0.8202090400141003,0.7756431473709574,0.8014880285964225,0.7582545514270103,0.7876858005963767,0.7806529765018055,0.7556743798823118
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