family_results.csv

Method,nc_f1_0,nc_f1_1,nc_f1_2,nc_f1_3,nc_f1_4,nc_f1_5,nc_f1_6,nc_f1_7,nc_f1_8,nc_f1_9,nc_accuracy_0,nc_accuracy_1,nc_accuracy_2,nc_accuracy_3,nc_accuracy_4,nc_accuracy_5,nc_accuracy_6,nc_accuracy_7,nc_accuracy_8,nc_accuracy_9,nc_mcc_0,nc_mcc_1,nc_mcc_2,nc_mcc_3,nc_mcc_4,nc_mcc_5,nc_mcc_6,nc_mcc_7,nc_mcc_8,nc_mcc_9,uc30_f1_0,uc30_f1_1,uc30_f1_2,uc30_f1_3,uc30_f1_4,uc30_f1_5,uc30_f1_6,uc30_f1_7,uc30_f1_8,uc30_f1_9,uc30_accuracy_0,uc30_accuracy_1,uc30_accuracy_2,uc30_accuracy_3,uc30_accuracy_4,uc30_accuracy_5,uc30_accuracy_6,uc30_accuracy_7,uc30_accuracy_8,uc30_accuracy_9,uc30_mcc_0,uc30_mcc_1,uc30_mcc_2,uc30_mcc_3,uc30_mcc_4,uc30_mcc_5,uc30_mcc_6,uc30_mcc_7,uc30_mcc_8,uc30_mcc_9,uc50_f1_0,uc50_f1_1,uc50_f1_2,uc50_f1_3,uc50_f1_4,uc50_f1_5,uc50_f1_6,uc50_f1_7,uc50_f1_8,uc50_f1_9,uc50_accuracy_0,uc50_accuracy_1,uc50_accuracy_2,uc50_accuracy_3,uc50_accuracy_4,uc50_accuracy_5,uc50_accuracy_6,uc50_accuracy_7,uc50_accuracy_8,uc50_accuracy_9,uc50_mcc_0,uc50_mcc_1,uc50_mcc_2,uc50_mcc_3,uc50_mcc_4,uc50_mcc_5,uc50_mcc_6,uc50_mcc_7,uc50_mcc_8,uc50_mcc_9,mm15_f1_0,mm15_f1_1,mm15_f1_2,mm15_f1_3,mm15_f1_4,mm15_f1_5,mm15_f1_6,mm15_f1_7,mm15_f1_8,mm15_f1_9,mm15_accuracy_0,mm15_accuracy_1,mm15_accuracy_2,mm15_accuracy_3,mm15_accuracy_4,mm15_accuracy_5,mm15_accuracy_6,mm15_accuracy_7,mm15_accuracy_8,mm15_accuracy_9,mm15_mcc_0,mm15_mcc_1,mm15_mcc_2,mm15_mcc_3,mm15_mcc_4,mm15_mcc_5,mm15_mcc_6,mm15_mcc_7,mm15_mcc_8,mm15_mcc_9
AAC,0.5999629064697781,0.5929812401529669,0.5964907854651642,0.6712617997558451,0.5798014922197244,0.643334813526417,0.6638995817661798,0.6063058524986431,0.589095206780167,0.6344804040943096,0.5605263157894737,0.5552631578947368,0.5697368421052632,0.6657894736842105,0.55,0.6171052631578947,0.6960526315789474,0.6052631578947368,0.5605263157894737,0.6328947368421053,0.4201666646363649,0.4434482481293225,0.447078060160686,0.5247730159496871,0.4251467509748188,0.4877877735371404,0.5267074306540094,0.4016822228495902,0.4447063637197564,0.4854514044371013,0.6441791602408857,0.6659471217277958,0.2744022212258879,0.6810306153890067,0.294890900704391,0.6728762322485765,0.6662440004214665,0.3562746491029976,0.671425793688758,0.5319014741064042,0.6328947368421053,0.6763157894736842,0.2828947368421052,0.7013157894736842,0.2697368421052631,0.7,0.6605263157894737,0.3671052631578947,0.6907894736842105,0.5263157894736842,0.4528612293721784,0.5324935464037286,0.3139267063905157,0.5282075087704866,0.2713405832632168,0.5386075167964423,0.4738592737540565,0.3164690895449788,0.5102388095352921,0.4124294383551251,0.6269192561535878,0.6227895811711824,0.6837432107937574,0.4061152361224047,0.3528012817998797,0.6789295452489651,0.6765851076427892,0.3262364571928722,0.5844731395797953,0.6193997936508427,0.6157894736842106,0.6078947368421053,0.6855263157894737,0.3815789473684211,0.3105263157894737,0.7236842105263158,0.6934210526315789,0.3263157894736842,0.5565789473684211,0.6039473684210527,0.4380919450137592,0.459237198972648,0.5195232528588795,0.377367025167462,0.2674386509472318,0.5669839773910933,0.5342297646158695,0.3018133501870932,0.4353228352590607,0.4538948640059488,0.5195655442451639,0.5803927639032618,0.6049047440634502,0.6392512173156933,0.6429887581329458,0.6126291094062076,0.5556624264417406,0.5054502882193888,0.6206709148673233,0.5863679509533783,0.4802631578947368,0.5421052631578948,0.5855263157894737,0.6223684210526316,0.6631578947368421,0.625,0.5131578947368421,0.481578947368421,0.6078947368421053,0.5539473684210526,0.3574783891253673,0.4022136489394928,0.4200642129592952,0.4556556549144878,0.4909460767271141,0.4635950410398087,0.3694414264847491,0.360005062498882,0.4533781429945892,0.3937627686955632
APAAC,0.4423383651568078,0.2685361876306252,0.6493693136542558,0.6775706711451815,0.5719739331360748,0.5673124267959669,0.0305997552019583,0.6172082187756861,0.5480141992095219,0.2631824782735595,0.4157894736842105,0.2947368421052631,0.6368421052631579,0.6671052631578948,0.5605263157894737,0.5447368421052632,0.131578947368421,0.6684210526315789,0.5342105263157895,0.2684210526315789,0.3368426316731904,0.3232607190431338,0.4582384660006033,0.5039162108215215,0.4405203555117545,0.4194297402479908,0.0,0.437543626647736,0.4019817764478168,0.2342489381092543,0.1419779501608726,0.0142656500802568,0.4186122933831535,0.1605343618898022,0.2026929273733785,0.2546536287677016,0.3415456937884396,0.2106548561952966,0.2368677804740561,0.3332417741059612,0.1447368421052631,0.0631578947368421,0.3802631578947368,0.2223684210526315,0.2578947368421053,0.325,0.3552631578947368,0.2552631578947368,0.3026315789473684,0.3539473684210526,0.1962962462248154,0.0430234751263912,0.2697320908934033,0.2214416170932399,0.2468922412002714,0.332959329312894,0.3092133681192217,0.1994081035318999,0.3135096935285152,0.2657527926543522,0.6785384014451856,0.5162747863673974,0.4638904420740528,0.5068995026042811,0.1261633980503638,0.6508014286732356,0.1600275360710623,0.4611322085870435,0.0028050163431392,0.2769131772260603,0.6947368421052632,0.4710526315789474,0.4697368421052632,0.4434210526315789,0.1855263157894736,0.6552631578947369,0.1802631578947368,0.4578947368421052,0.0381578947368421,0.2921052631578947,0.5224960500008671,0.3693555053935371,0.3620126854784594,0.3022047560282467,0.1611874532490335,0.4541935082715948,0.1957257329220702,0.3266602495876088,0.0,0.27130996671661,0.2612368505271057,0.1768262134739024,0.4795267914611288,0.1558314302699939,0.6262680393031224,0.2017354533208353,0.2448136443173301,0.4501858986387402,0.5444374714793679,0.6380108496395867,0.306578947368421,0.1842105263157894,0.4460526315789473,0.1631578947368421,0.618421052631579,0.2434210526315789,0.2802631578947368,0.4460526315789473,0.5263157894736842,0.6394736842105263,0.2550025012024726,0.1284720411900421,0.2603406314618441,0.1574785777888017,0.4245677092303732,0.3061071452705793,0.2235378435507276,0.3143353899680435,0.3592688736899705,0.4498134567681711
LEARNED-VEC,0.6843711648464215,0.6971638429228529,0.6781851961182509,0.6961967634339067,0.7186744938529526,0.6962940894937845,0.6898626461452966,0.6708424435883671,0.6657354812832101,0.6821350119114304,0.6697368421052632,0.6881578947368421,0.6578947368421053,0.6881578947368421,0.7105263157894737,0.6855263157894737,0.6789473684210526,0.6526315789473685,0.6473684210526316,0.675,0.5167454691816817,0.5657737635750049,0.5358445587075054,0.5547869101439175,0.5684841740202812,0.563706321202873,0.5356869196468427,0.5155926138551878,0.5110273432416085,0.5307379378654852,0.6518839810958631,0.6673038049145511,0.696003212329899,0.7005904866024701,0.698089756307183,0.7172802510221639,0.6790640253148706,0.6718426752042539,0.6660756528426546,0.6660258673812761,0.6289473684210526,0.6473684210526316,0.6802631578947368,0.6881578947368421,0.6894736842105263,0.7197368421052631,0.6736842105263158,0.6657894736842105,0.6526315789473685,0.6592105263157895,0.4904529808042239,0.540186567677352,0.540211059016223,0.5551764834731474,0.5505928711279668,0.5855759390180894,0.5199270308301155,0.5016827157913821,0.5174405012836986,0.5214766642754314,0.685953390681399,0.714064114926968,0.7046455415017605,0.6842103363821203,0.6998434554191044,0.7052824722435549,0.6774302821519507,0.6916959184187155,0.6744486696511044,0.6836955649292998,0.6657894736842105,0.7092105263157895,0.6960526315789474,0.6671052631578948,0.6921052631578948,0.7052631578947368,0.6578947368421053,0.6828947368421052,0.6657894736842105,0.675,0.5168858582027083,0.5807375525752597,0.545822311849752,0.5373107193053736,0.5502715917734897,0.5706443204578707,0.5109980496544491,0.523284279192541,0.5152410570987707,0.5354782784768145,0.5989465833772292,0.6633677932504795,0.6556204470568109,0.6791224364966476,0.7231613840489808,0.696879089734241,0.6144926287558875,0.6252344842490187,0.630208809474236,0.6767483889500866,0.5644736842105263,0.6394736842105263,0.6328947368421053,0.6657894736842105,0.7144736842105263,0.6947368421052632,0.5855263157894737,0.5986842105263158,0.6026315789473684,0.6671052631578948,0.4304359237766991,0.5126279509850357,0.4881151939062282,0.512014842560298,0.5586412910123078,0.5475810040139261,0.432305696954252,0.4331078462060721,0.4507116510235596,0.5073989474930026
PROTVEC,0.5305646335085417,0.6725893986313051,0.2612902633169396,0.3326731527283424,0.3870689441153306,0.6343035194303284,0.0674422888490895,0.660677833899719,0.5838474392864992,0.2527935008316769,0.5157894736842106,0.6447368421052632,0.2881578947368421,0.2776315789473684,0.3776315789473684,0.6105263157894737,0.1513157894736842,0.6447368421052632,0.5394736842105263,0.2513157894736842,0.3940249826814559,0.4792621678224177,0.3010151945868362,0.2585218971620969,0.3211715992307913,0.4734389603763699,0.1208318206214868,0.4700292411648032,0.4089468400547896,0.2909735735064068,0.0526188101591211,0.4120465196681942,0.664610663949725,0.6260270360014372,0.4133821369469347,0.4518402586359099,0.3786972436680916,0.6617960278482132,0.4204465943301764,0.4834776259379109,0.1223684210526315,0.3947368421052631,0.6460526315789473,0.6065789473684211,0.4144736842105263,0.4407894736842105,0.3815789473684211,0.65,0.3434210526315789,0.4855263157894737,0.1069230037949204,0.3240875377991226,0.4575855426157078,0.4809906592070739,0.3310980636155169,0.4035652892384517,0.3305866794127101,0.4640251305468363,0.248189098446746,0.4180244031256473,0.6443531580059023,0.4918613898255926,0.4366627635586518,0.6269368294840101,0.4719199471421841,0.6552145684210732,0.3597366238513213,0.5197217798134747,0.649919696323252,0.6008325592709702,0.6263157894736842,0.4592105263157894,0.4421052631578947,0.5828947368421052,0.4710526315789474,0.6723684210526316,0.3421052631578947,0.5026315789473684,0.6407894736842106,0.5723684210526315,0.4529309623908815,0.3784710807692412,0.347695101439401,0.4628927177723722,0.3655732626511529,0.5195636660909713,0.2601030277639509,0.3848128118411924,0.4835086259956457,0.408324033064877,0.5962765332276149,0.5173117142208173,0.6186656338780943,0.7153868640371536,0.1856233915185526,0.7000096556956005,0.2095015834723357,0.5798964744860022,0.6861334208372526,0.5627905148110691,0.5565789473684211,0.4605263157894737,0.6118421052631579,0.7157894736842105,0.2407894736842105,0.6934210526315789,0.2697368421052631,0.5605263157894737,0.7,0.5592105263157895,0.3973916648061795,0.3477210529087325,0.4347182988853996,0.5551670359864656,0.2259082131823591,0.5274739828664889,0.2659592321429405,0.4065143543872639,0.5178562470237444,0.4196231025614178
K-SEP,0.7707684963351132,0.846815485756415,0.8172360258734629,0.836519893244467,0.7261760680037939,0.5917747750847914,0.7808090056102062,0.7593536269714123,0.7901797160401044,0.5763135661159259,0.7387862796833773,0.83841059602649,0.7997364953886693,0.8253968253968254,0.6746347941567065,0.5667107001321003,0.7575757575757576,0.7444005270092227,0.766798418972332,0.5640686922060766,0.640042483529755,0.7644518262902564,0.7117106273573295,0.7419202966279433,0.6021646759391158,0.5517128109410392,0.6686420098498201,0.64491321640245,0.6852209363487277,0.5368763023568188,0.8343513182191383,0.8373161604255616,0.8078819733853588,0.8496218678044358,0.8185917939238945,0.2536613790550254,0.8570739057565402,0.8054479406807009,0.8088039665995872,0.816928278387335,0.8350923482849604,0.8463576158940397,0.8274044795783926,0.8518518518518519,0.8100929614873837,0.2523117569352708,0.855072463768116,0.8115942028985508,0.7997364953886693,0.8058124174372523,0.7429739110421127,0.761279379697906,0.7223093050439837,0.7588089619564022,0.714909489365554,0.3657239753753684,0.7685688874252543,0.6884332842844963,0.6940551479845067,0.7162393420163401,0.7646473429620361,0.7761837938645487,0.7894874347568283,0.8446813188085541,0.8449584205809447,0.803013581107586,0.8463539845635882,0.8113046471788579,0.7981538759487764,0.8003738120653137,0.7506596306068601,0.7509933774834437,0.7654808959156785,0.83994708994709,0.8419654714475432,0.7912813738441216,0.849802371541502,0.8221343873517787,0.8036890645586298,0.7846763540290621,0.64782337010478,0.6738313227111068,0.6797104139495174,0.7582545798984892,0.7531479595063091,0.6972558554338876,0.7549039328908572,0.705124893359371,0.6980392070510753,0.6995871270871004,0.7429386434532029,0.7815499818090516,0.7413079068788596,0.5799907562888491,0.7923082843980825,0.7588088555934794,0.7669993308126748,0.684144211710838,0.6292382214748218,0.7765619896385124,0.6992084432717678,0.7602649006622516,0.7562582345191041,0.5568783068783069,0.7861885790172642,0.7727873183619551,0.7602108036890646,0.6574440052700923,0.5876152832674572,0.7635402906208718,0.581101119599981,0.6767810704943809,0.6021953797806435,0.4976956640508178,0.6886735959654415,0.6577457041596863,0.6507739082654157,0.5768935489563931,0.4971721315686905,0.6408515754251058
MUT2VEC,0.5972968500725933,0.6212917409537195,0.5632939083257605,0.6001870030831633,0.5710526414763588,0.5445902273675857,0.5803029641874369,0.566667743577911,0.5384062224184304,0.5714537431445593,0.5757997218358831,0.6082621082621082,0.5394366197183098,0.5852272727272727,0.5483870967741935,0.5214384508990318,0.5568022440392707,0.5477178423236515,0.5147679324894515,0.543661971830986,0.3946820541267777,0.4405997550460648,0.337415881653588,0.3715536226130108,0.3611233663105448,0.3602672499821672,0.3844675563372017,0.3508138226559532,0.3318767036144481,0.3616545306926499,0.5753539894827319,0.6041433062079811,0.5600049559225876,0.5610437487162041,0.5528953531395511,0.6054990193539659,0.613811635182693,0.5850387676644613,0.5478645104638878,0.5800066467524869,0.5549374130737135,0.584045584045584,0.5408450704225352,0.5383522727272727,0.5259467040673211,0.5905947441217151,0.5960729312762973,0.5670816044260027,0.5246132208157525,0.5605633802816902,0.3722198860141415,0.415504469630188,0.3325368936842853,0.3422718172704385,0.3476302152537939,0.3887458944086198,0.4088221925337235,0.3597203256706503,0.3279757884185098,0.3600163765042576,0.5685980880659018,0.6139586364497823,0.5694277342424642,0.5949767339800145,0.5792132279015504,0.567455576544595,0.5744347213807187,0.6072211163111618,0.5437068604452487,0.594246898454572,0.5438108484005564,0.594017094017094,0.5492957746478874,0.5866477272727273,0.5610098176718092,0.5435684647302904,0.5483870967741935,0.5947441217150761,0.5218002812939522,0.5746478873239437,0.3683762650884453,0.4223636654226833,0.3454982916509446,0.35555812627147,0.3456582796711991,0.371654134700872,0.3740323063693376,0.3724002525742787,0.3305387238235145,0.3758425952038015,0.6040863748457491,0.6039811143339084,0.5864407886638312,0.5787166987805588,0.575079718536896,0.6017662202744752,0.6119015357442268,0.5951876206460072,0.5414239865769832,0.5954263299117779,0.5855354659248957,0.5883190883190883,0.5633802816901409,0.5681818181818182,0.5539971949509116,0.5878284923928078,0.5960729312762973,0.5753803596127247,0.5189873417721519,0.5859154929577465,0.3906381223935248,0.3874656449620068,0.348403972515423,0.3212855666288337,0.3428862494023493,0.3738957607750162,0.3872411195891815,0.3793083797949313,0.326232387483693,0.3595297705386814
GENE2VEC,0.4921167791459459,0.4911711232747838,0.442840908521379,0.5302170286165299,0.4756182140151972,0.5045452462914785,0.5059174428063758,0.5192143282457437,0.5108648051328027,0.5059883021455827,0.4607843137254901,0.4493580599144079,0.4097421203438395,0.5035460992907801,0.4455732946298984,0.4814814814814814,0.4679300291545189,0.4831460674157303,0.4855491329479768,0.4808510638297872,0.2212171636069296,0.2816753447152443,0.2409397032052123,0.3044183706479436,0.2577273433154146,0.265050295951355,0.2908296467833845,0.293156692025043,0.2621437895416987,0.2838064110727634,0.4608269207497631,0.5300846056656962,0.4478530081619495,0.5319042298841716,0.482093823241269,0.5053840509658007,0.5220804514630119,0.5460100206603734,0.5227004664397356,0.4949322321102873,0.42296918767507,0.5021398002853067,0.4183381088825215,0.5035460992907801,0.4470246734397677,0.4829059829059829,0.4825072886297376,0.5126404494382022,0.4956647398843931,0.4680851063829787,0.2185853129604495,0.2965625443878595,0.2549723441921469,0.3074781266803573,0.2361835198290729,0.2690883152775349,0.2580653100242669,0.3056928980463829,0.2691334378044159,0.2932996594396422,0.4516658894134094,0.4693754578374234,0.4817932165032286,0.5097189721008872,0.440712221957744,0.4832653056660145,0.5239602407738158,0.5148971520861348,0.4905044178444681,0.5213659948793088,0.4145658263305322,0.4379457917261055,0.4555873925501432,0.4794326241134752,0.4049346879535558,0.4558404558404558,0.4810495626822157,0.476123595505618,0.4609826589595375,0.502127659574468,0.2023076753971323,0.2713756777109278,0.2619848984980565,0.278456547729111,0.2204256697198509,0.260270035756347,0.2943765595815163,0.2928415908711408,0.249823988542366,0.2969895463684787,0.4115374941656392,0.4335224457282388,0.4497517381840182,0.4763217580837401,0.4200560391829552,0.4893493665974265,0.4576957918290354,0.4740825524694084,0.4421295251554093,0.4858874190043872,0.3725490196078431,0.3965763195435092,0.4126074498567335,0.4326241134751773,0.3759071117561683,0.4572649572649572,0.4067055393586006,0.4269662921348314,0.4017341040462427,0.4524822695035461,0.1851096387874127,0.2366559371446337,0.2163563254804497,0.2366579773202624,0.1702199560099112,0.2246194424638159,0.2188029634246492,0.2339054022008184,0.1978336652593506,0.2465593355841842
TCGA-EMBEDDING,0.48164815787427073,0.4808127219142234,0.43552920372157006,0.4324169731021579,0.5177795068982821,0.48112285028282376,0.5404820217169857,0.48542857159334774,0.4885163691788489,0.48691913942418136,0.46524064171123,0.4577181208053691,0.4166666666666667,0.408355795148248,0.49931787175989084,0.48064085447263016,0.527027027027027,0.4587280108254398,0.48717948717948717,0.4577181208053691,0.2286968580619686,0.2601353434482007,0.23031296742135826,0.23631194916843085,0.2635557621961782,0.23962756595025855,0.2953728434963636,0.22127585623510068,0.23885312513987025,0.26191235538666446,0.5179360844144525,0.5010154795099835,0.3867224690820816,0.4906671095660554,0.37151315784980876,0.47895127266721604,0.5112496675291254,0.48876826832716114,0.49777150034144013,0.5042957966850216,0.5280748663101604,0.48322147651006714,0.3817204301075269,0.47035040431266845,0.3506139154160982,0.4512683578104139,0.49864864864864866,0.4614343707713126,0.4844804318488529,0.48053691275167787,0.2517130274911934,0.2617848501866382,0.20858628132117243,0.2502111803301788,0.2112698877893442,0.24611734696049847,0.27724529826367683,0.2405989099239982,0.24322398168805986,0.25276512234413145,0.47646371416941,0.5085934382407308,0.4451726856880728,0.4644055254664764,0.5184127552298581,0.521442845682385,0.43725489686855507,0.4852926658620127,0.4898587239490579,0.5010462085820022,0.4451871657754011,0.4885906040268456,0.41935483870967744,0.4501347708894879,0.5266030013642565,0.5046728971962616,0.41621621621621624,0.456021650879567,0.4750337381916329,0.48590604026845635,0.237415689088743,0.27860703320182917,0.23914667313023602,0.2406681821408777,0.26739353840683217,0.2696342242118523,0.24889466048866482,0.2352555136447007,0.23015103035364476,0.24624471802578046,0.4794543797701664,0.42324947382056965,0.4850823375195657,0.46459612328031585,0.38086844298359296,0.4541563611190023,0.5059291262217156,0.5183898751928784,0.36703376734109344,0.4508692547818999,0.4893048128342246,0.4053691275167785,0.48118279569892475,0.4501347708894879,0.33560709413369716,0.42456608811748997,0.49594594594594593,0.5128552097428958,0.32118758434547906,0.425503355704698,0.22164842856076117,0.18407856852617505,0.21653682259911133,0.2358236229421344,0.1443353101743842,0.19663123391785095,0.24248603792312554,0.2308174236968389,0.12166262476799942,0.19072913791054127