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Parent(s):
b17699d
Update code/process_input.py
Browse files- code/process_input.py +2 -0
code/process_input.py
CHANGED
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@@ -10,6 +10,7 @@ def clean_data(input_set):
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for i in input_set:
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data = data.append(pd.Series([j.strip() for j in i.split('-')]), ignore_index=True)
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data.columns = ['uniprotID', 'wt', 'pos', 'mut']
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if initial_len != len(data):
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st.write(f'{initial_len- len(data)} of {initial_len} datapoints is omitted. Check your input.')
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elif '\t' in input_set:
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@@ -19,6 +20,7 @@ def clean_data(input_set):
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for i in input_set:
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data = data.append(pd.Series([j.strip() for j in i.split('-')]), ignore_index=True)
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data.columns = ['uniprotID', 'wt', 'pos', 'mut']
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if initial_len != len(data):
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st.write(f'{initial_len- len(data)} of {initial_len} datapoints is omitted. Check your input.')
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elif '-' in input_set:
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for i in input_set:
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data = data.append(pd.Series([j.strip() for j in i.split('-')]), ignore_index=True)
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data.columns = ['uniprotID', 'wt', 'pos', 'mut']
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data = data[((~data.uniprotID.isna()) & (~data.wt.isna()) & (~data.pos.isna()) & (~data.mut.isna()))]
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if initial_len != len(data):
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st.write(f'{initial_len- len(data)} of {initial_len} datapoints is omitted. Check your input.')
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elif '\t' in input_set:
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for i in input_set:
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data = data.append(pd.Series([j.strip() for j in i.split('-')]), ignore_index=True)
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data.columns = ['uniprotID', 'wt', 'pos', 'mut']
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data = data[((~data.uniprotID.isna()) & (~data.wt.isna()) & (~data.pos.isna()) & (~data.mut.isna()))]
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if initial_len != len(data):
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st.write(f'{initial_len- len(data)} of {initial_len} datapoints is omitted. Check your input.')
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elif '-' in input_set:
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