Merge pull request #11 from EveSa/revert-10-revert-9-Ling

requirements.txt

@@ -1,15 +1,56 @@
+absl-py==1.4.0
+aiohttp==3.8.4
+aiosignal==1.3.1
+alembic==1.9.4
+anyascii==0.3.1
 anyio==3.6.2
+async-timeout==4.0.2
+attrs==22.2.0
+banal==1.0.6
+blis==0.7.9
+catalogue==2.0.8
+certifi==2022.12.7
+charset-normalizer==3.0.1
+click==8.1.3
+confection==0.0.4
+contourpy==1.0.7
+contractions==0.1.73
+cycler==0.11.0
+cymem==2.0.7
+dataloader==2.0
+dataset==1.6.0
+datasets==2.10.1
+dill==0.3.6
+en-core-web-lg==3.5.0
+evaluate==0.4.0
+fastapi==0.91.0
+filelock==3.9.0
+flake8==6.0.0
+fonttools==4.38.0
+frozenlist==1.3.3
+fsspec==2023.3.0
+greenlet==2.0.2
+h11==0.14.0
+huggingface-hub==0.12.1
 certifi==2022.12.7
 charset-normalizer==3.1.0
 click==8.1.3
 fastapi==0.92.0
 filelock==3.9.0
-h11==0.14.0
-huggingface-hub==0.13.1
 idna==3.4
+importlib-metadata==6.0.0
+importlib-resources==5.12.0
 Jinja2==3.1.2
 joblib==1.2.0
+kiwisolver==1.4.4
+langcodes==3.3.0
+Mako==1.2.4
 MarkupSafe==2.1.2
+matplotlib==3.7.0
+mccabe==0.7.0
+multidict==6.0.4
+multiprocess==0.70.14
+murmurhash==1.0.9
 numpy==1.24.2
 nvidia-cublas-cu11==11.10.3.66
 nvidia-cuda-nvrtc-cu11==11.7.99
@@ -17,15 +58,48 @@ nvidia-cuda-runtime-cu11==11.7.99
 nvidia-cudnn-cu11==8.5.0.96
 packaging==23.0
 pandas==1.5.3
-pydantic==1.10.5
+pathy==0.10.1
+Pillow==9.4.0
+preshed==3.0.8
+protobuf==3.20.0
+pyahocorasick==2.0.0
+pyarrow==11.0.0
+pycodestyle==2.10.0
+pydantic==1.10.4
+pyflakes==3.0.1
+pyparsing==3.0.9
 python-dateutil==2.8.2
-python-multipart==0.0.6
+python-multipart==0.0.5
 pytz==2022.7.1
 PyYAML==6.0
 regex==2022.10.31
 requests==2.28.2
+responses==0.18.0
+rouge-score==0.1.2
+scikit-learn==1.2.1
+scipy==1.10.0
+sentencepiece==0.1.97
 six==1.16.0
+smart-open==6.3.0
 sniffio==1.3.0
+spacy==3.5.0
+spacy-legacy==3.0.12
+spacy-loggers==1.0.4
+SQLAlchemy==1.4.46
+srsly==2.4.5
+starlette==0.24.0
+summarizer==0.0.7
+textsearch==0.0.24
+thinc==8.1.7
+threadpoolctl==3.1.0
+tokenizers==0.13.2
+tomli==2.0.1
+torch==1.13.1
+tqdm==4.64.1
+transformers==4.26.1
+typer==0.7.0
+typing-extensions==4.4.0
+urllib3==1.26.14
 starlette==0.25.0
 tokenizers==0.13.2
 torch==1.13.1
@@ -33,3 +107,7 @@ tqdm==4.65.0
 typing_extensions==4.5.0
 urllib3==1.26.15
 uvicorn==0.20.0
+wasabi==1.1.1
+xxhash==3.2.0
+yarl==1.8.2
+zipp==3.14.0

src/fine_tune_T5.py

@@ -0,0 +1,230 @@
+import re
+import os
+import string
+import contractions
+import torch
+import datasets
+from datasets import Dataset
+import pandas as pd
+from tqdm import tqdm
+import evaluate
+from transformers import AutoModelForSeq2SeqLM, AutoTokenizer, AutoConfig
+from transformers import Seq2SeqTrainingArguments, Seq2SeqTrainer
+from transformers import DataCollatorForSeq2Seq
+
+
+def clean_text(texts):
+    '''This fonction makes clean text for the future use'''
+    texts = texts.lower()
+    texts = contractions.fix(texts)
+    texts = texts.translate(str.maketrans("", "", string.punctuation))
+    texts = re.sub(r'\n', ' ', texts)
+    return texts
+
+
+def datasetmaker(path=str):
+    '''This fonction take the jsonl file, read it to a dataframe,
+     remove the colums not needed for the task and turn it into a file type Dataset
+    '''
+    data = pd.read_json(path, lines=True)
+    df = data.drop(['url',
+                    'archive',
+                    'title',
+                    'date',
+                    'compression',
+                    'coverage',
+                    'density',
+                    'compression_bin',
+                    'coverage_bin',
+                    'density_bin'],
+                   axis=1)
+    tqdm.pandas()
+    df['text'] = df.text.apply(lambda texts: clean_text(texts))
+    df['summary'] = df.summary.apply(lambda summary: clean_text(summary))
+    dataset = Dataset.from_dict(df)
+    return dataset
+
+# voir si le model par hasard esr déjà bien
+
+# test_text = dataset['text'][0]
+# pipe = pipeline('summarization', model = model_ckpt)
+# pipe_out = pipe(test_text)
+# print(pipe_out[0]['summary_text'].replace('.<n>', '.\n'))
+# print(dataset['summary'][0])
+
+
+def generate_batch_sized_chunks(list_elements, batch_size):
+    """split the dataset into smaller batches that we can process simultaneously
+    Yield successive batch-sized chunks from list_of_elements."""
+    for i in range(0, len(list_elements), batch_size):
+        yield list_elements[i: i + batch_size]
+
+
+def calculate_metric(dataset, metric, model, tokenizer,
+                     batch_size, device,
+                     column_text='text',
+                     column_summary='summary'):
+    article_batches = list(
+        str(generate_batch_sized_chunks(dataset[column_text], batch_size)))
+    target_batches = list(
+        str(generate_batch_sized_chunks(dataset[column_summary], batch_size)))
+
+    for article_batch, target_batch in tqdm(
+            zip(article_batches, target_batches), total=len(article_batches)):
+
+        inputs = tokenizer(article_batch, max_length=1024, truncation=True,
+                           padding="max_length", return_tensors="pt")
+        # parameter for length penalty ensures that the model does not
+        # generate sequences that are too long.
+        summaries = model.generate(
+            input_ids=inputs["input_ids"].to(device),
+            attention_mask=inputs["attention_mask"].to(device),
+            length_penalty=0.8,
+            num_beams=8,
+            max_length=128)
+
+        # Décode les textes
+        # renplacer les tokens, ajouter des textes décodés avec les rédéfences
+        # vers la métrique.
+        decoded_summaries = [
+            tokenizer.decode(
+                s,
+                skip_special_tokens=True,
+                clean_up_tokenization_spaces=True) for s in summaries]
+
+        decoded_summaries = [d.replace("", " ") for d in decoded_summaries]
+
+        metric.add_batch(
+            predictions=decoded_summaries,
+            references=target_batch)
+
+    # compute et return les ROUGE scores.
+    results = metric.compute()
+    rouge_names = ['rouge1', 'rouge2', 'rougeL', 'rougeLsum']
+    rouge_dict = dict((rn, results[rn]) for rn in rouge_names)
+    return pd.DataFrame(rouge_dict, index=['T5'])
+
+
+def convert_ex_to_features(example_batch):
+    input_encodings = tokenizer(example_batch['text'],
+                                max_length=1024, truncation=True)
+
+    labels = tokenizer(
+        example_batch['summary'],
+        max_length=128,
+        truncation=True)
+
+    return {
+        'input_ids': input_encodings['input_ids'],
+        'attention_mask': input_encodings['attention_mask'],
+        'labels': labels['input_ids']
+    }
+
+
+if __name__ == '__main__':
+
+    train_dataset = datasetmaker('data/train_extract.jsonl')
+
+    dev_dataset = datasetmaker('data/dev_extract.jsonl')
+
+    test_dataset = datasetmaker('data/test_extract.jsonl')
+
+    dataset = datasets.DatasetDict({'train': train_dataset,
+                                    'dev': dev_dataset, 'test': test_dataset})
+
+    device = torch.device('cuda' if torch.cuda.is_available() else 'cpu')
+
+    tokenizer = AutoTokenizer.from_pretrained('google/mt5-small')
+    mt5_config = AutoConfig.from_pretrained(
+        'google/mt5-small',
+        max_length=128,
+        length_penalty=0.6,
+        no_repeat_ngram_size=2,
+        num_beams=15,
+    )
+    model = (AutoModelForSeq2SeqLM
+             .from_pretrained('google/mt5-small', config=mt5_config)
+             .to(device))
+
+    dataset_pt = dataset.map(
+        convert_ex_to_features,
+        remove_columns=[
+            "summary",
+            "text"],
+        batched=True,
+        batch_size=128)
+
+    data_collator = DataCollatorForSeq2Seq(
+        tokenizer, model=model, return_tensors="pt")
+
+    training_args = Seq2SeqTrainingArguments(
+        output_dir="t5_summary",
+        log_level="error",
+        num_train_epochs=10,
+        learning_rate=5e-4,
+        warmup_steps=0,
+        optim="adafactor",
+        weight_decay=0.01,
+        per_device_train_batch_size=2,
+        per_device_eval_batch_size=1,
+        gradient_accumulation_steps=16,
+        evaluation_strategy="steps",
+        eval_steps=100,
+        predict_with_generate=True,
+        generation_max_length=128,
+        save_steps=500,
+        logging_steps=10,
+        # push_to_hub = True
+    )
+
+    trainer = Seq2SeqTrainer(
+        model=model,
+        args=training_args,
+        data_collator=data_collator,
+        # compute_metrics = calculate_metric,
+        train_dataset=dataset_pt['train'],
+        eval_dataset=dataset_pt['dev'].select(range(10)),
+        tokenizer=tokenizer,
+    )
+
+    trainer.train()
+    rouge_metric = evaluate.load("rouge")
+
+    score = calculate_metric(
+        test_dataset,
+        rouge_metric,
+        trainer.model,
+        tokenizer,
+        batch_size=2,
+        device=device,
+        column_text='text',
+        column_summary='summary')
+    print(score)
+
+    # Fine Tuning terminés et à sauvgarder
+
+    # save fine-tuned model in local
+    os.makedirs("t5_summary", exist_ok=True)
+    if hasattr(trainer.model, "module"):
+        trainer.model.module.save_pretrained("t5_summary")
+    else:
+        trainer.model.save_pretrained("t5_summary")
+    tokenizer.save_pretrained("t5_summary")
+    # load local model
+    model = (AutoModelForSeq2SeqLM
+             .from_pretrained("t5_summary")
+             .to(device))
+
+    # mettre en usage : TEST
+
+    # gen_kwargs = {"length_penalty" : 0.8, "num_beams" : 8, "max_length" : 128}
+    # sample_text = dataset["test"][0]["text"]
+    # reference = dataset["test"][0]["summary"]
+    # pipe = pipeline("summarization", model='./summarization_t5')
+
+    # print("Text :")
+    # print(sample_text)
+    # print("\nReference Summary :")
+    # print(reference)
+    # print("\nModel Summary :")
+    # print(pipe(sample_text, **gen_kwargs)[0]["summary_text"])

src/inference_t5.py

@@ -7,14 +7,16 @@ import re
 import string
 from transformers import AutoModelForSeq2SeqLM, AutoTokenizer
 
-def clean_data(texts):
+
+def clean_text(texts: str) -> str:
     texts = texts.lower()
     texts = contractions.fix(texts)
     texts = texts.translate(str.maketrans("", "", string.punctuation))
-    texts = re.sub(r'\n',' ',texts)
+    texts = re.sub(r'\n', ' ', texts)
     return texts
 
-def inferenceAPI_t5(text: str) -> str:
+
+def inferenceAPI(text: str) -> str:
     """
     Predict the summary for an input text
     --------
@@ -25,14 +27,16 @@ def inferenceAPI_t5(text: str) -> str:
         str
             The summary for the input text
     """
-    # definition des parametres d'entree pour le modèle
-    text = clean_data(text)
-    device = torch.device("cpu" if torch.cuda.is_available() else "cpu")
-    tokenizer= (AutoTokenizer.from_pretrained("./summarization_t5"))
-    # chargement du modele local
+
+    # On défini les paramètres d'entrée pour le modèle
+    text = clean_text(text)
+    device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
+    tokenizer = (AutoTokenizer.from_pretrained("Linggg/t5_summary"))
+    # load local model
     model = (AutoModelForSeq2SeqLM
-            .from_pretrained("./summarization_t5")
-            .to(device))
+             .from_pretrained("Linggg/t5_summary")
+             .to(device))
+
     text_encoding = tokenizer(
         text,
         max_length=1024,
@@ -52,11 +56,12 @@ def inferenceAPI_t5(text: str) -> str:
     )
 
     preds = [
-            tokenizer.decode(gen_id, skip_special_tokens=True, clean_up_tokenization_spaces=True)
-            for gen_id in generated_ids
+        tokenizer.decode(gen_id, skip_special_tokens=True, clean_up_tokenization_spaces=True)
+        for gen_id in generated_ids
     ]
     return "".join(preds)
 
-if __name__ == "__main__":
-     text = input('Entrez votre phrase à résumer : ')
-     print('summary:',inferenceAPI(text))
+
+# if __name__ == "__main__":
+#     text = input('Entrez votre phrase à résumer : ')
+#     print('summary:', inferenceAPI(text))