Merge pull request #28 from The-Obstacle-Is-The-Way/fix/gradio-upgrade-cleanup

README.md

@@ -4,7 +4,7 @@ emoji: 🧬
 colorFrom: blue
 colorTo: purple
 sdk: gradio
-sdk_version: 5.0.0
+sdk_version: "5.33.0"
 python_version: "3.11"
 app_file: src/app.py
 pinned: false

pyproject.toml

@@ -17,7 +17,7 @@ dependencies = [
     "beautifulsoup4>=4.12", # HTML parsing
     "xmltodict>=0.13", # PubMed XML -> dict
     # UI
-    "gradio[mcp]>=5.0.0", # Chat interface
+    "gradio[mcp]>=5.32.0", # Chat interface with MCP server support
     # Utils
     "python-dotenv>=1.0", # .env loading
     "tenacity>=8.2", # Retry logic

requirements.txt

@@ -12,8 +12,8 @@ httpx>=0.27
 beautifulsoup4>=4.12
 xmltodict>=0.13
 
-# UI (Gradio with MCP support)
-gradio[mcp]>=5.0.0
+# UI (Gradio with MCP server support)
+gradio[mcp]>=5.32.0
 
 # Utils
 python-dotenv>=1.0

src/app.py

@@ -143,7 +143,7 @@ def create_demo() -> Any:
         - "What existing medications show promise for Long COVID?"
         """)
 
-        # Main chat interface (existing)
+        # Main chat interface
         gr.ChatInterface(
             fn=research_agent,
             title="",
@@ -246,7 +246,7 @@ def main() -> None:
         server_name="0.0.0.0",
         server_port=7860,
         share=False,
-        mcp_server=True,  # Enable MCP server
+        mcp_server=True,
     )
 
 

uv.lock

@@ -1105,11 +1105,6 @@ modal = [
     { name = "modal" },
 ]
 
-[package.dev-dependencies]
-dev = [
-    { name = "typer" },
-]
-
 [package.metadata]
 requires-dist = [
     { name = "agent-framework-core", marker = "extra == 'magentic'" },
@@ -1117,7 +1112,7 @@ requires-dist = [
     { name = "beautifulsoup4", specifier = ">=4.12" },
     { name = "chromadb", marker = "extra == 'embeddings'", specifier = ">=0.4.0" },
     { name = "chromadb", marker = "extra == 'modal'", specifier = ">=0.4.0" },
-    { name = "gradio", extras = ["mcp"], specifier = ">=5.0.0" },
+    { name = "gradio", extras = ["mcp"], specifier = ">=5.32.0" },
     { name = "httpx", specifier = ">=0.27" },
     { name = "llama-index", marker = "extra == 'modal'", specifier = ">=0.11.0" },
     { name = "llama-index-embeddings-openai", marker = "extra == 'modal'" },
@@ -1147,9 +1142,6 @@ requires-dist = [
 ]
 provides-extras = ["dev", "magentic", "embeddings", "modal"]
 
-[package.metadata.requires-dev]
-dev = [{ name = "typer", specifier = ">=0.20.0" }]
-
 [[package]]
 name = "defusedxml"
 version = "0.7.1"